Carg16396 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAACGAGTCAAGATTCAATTTATTTCTCCTTCATTTTGGTTTCTAGTTCCGATCACAGCCGGCGATGGAAGCAGCCTCGAATCTCAGTTCCTCACTTCCCCTTTCGCCGTCGCACCACAGGACCACCGCCGTCTTAACTCGTCTTCAGCGGATCGCTTCTTTATCCACAGCCGCCGCCGGAGCCCTCCCGTCGTGTCGTACACATTTGACTCGCCTTCATCAGCGTCGATCCGCGATTTTGCCTCTACGTTGCAATGGTAATTCGAATTTCCGATCTGTTGTGTAAGGTCAATATTCGCCGACGCAGGTCAAAATTGAACTCCTTGCGGTAAGGAACTTTTTGAACGATGGGCAATTTGGTCATATGGGTTCTCCGCTTGTTGCTTCAACTTTTTTGTATAAGAAATAATAAATTAAACCTATGGATTCCGTATTGGCCGCTGCCATTCTCTCTTTCTCTCTGGTCTTACCTCCCTTGAACTGGGTTTTGATCGAGTGTCCGGCGGCTGTTTGGCAGTGAGGGAGACGGTGGCAGATCAAGAAATGGCGTCTATTGATGTAGAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTTATCCCTGATTTTCCCAAACCAGGTACCAATCTCGTTCTTGGCTGATGGGTATTTTGTTGCTAAAGGCTAAATTTCTTTGGGCTGAACATTATCTTCCTTGTTTTGGTAGGGATTTTGTTTCAGGACATTACGACGTTGCTTCTTGATACCAAGGCCTTCAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAAGATATCACTGTGGTTGCAGGTAAATTCTAGTTTCAAAAGGGTGTCATTTAGATCAGGAAGTAATTTTGTAGTTTAACTTGAAGTGAACCAATTGATCTTGTTTGTTCTGTAGGGATTGAGGCGAGGGGTTTCATTTTTGGACCTCCCATAGCTCTGGCTATTGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTACAATTTTGTGCTTGACTCGCGTTTGTTTGTGGCCTTGTGAATCTATCTAGAAACTTTTTAATTTTTAACTAGATTCTAGCATAATGTTTCTGGATAGGATTGGCTTTGGGCCTTTCATGGGTAGCTTAGGTGGTGGGCGAAGAAGGCCCCCTTCTAGGGCCTCAAGTCATTAGTGAGATTTACTTTGAAAGAGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGTGAAGAAGGCTCCCCTCTGGGGGCTGAGCCATCAATGAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTGTCAGGTCCTACGGGCGAAGAAGGCCCCCATCCGGGGGGTCTGAGCCATCAACAAGATTCTACTCTGAAAGAGCTAGAATTGTAACCTACCTATGGGCGAAGAAGGCCCCCATCCAGGGGCCCGAGTCATCAGTGAGATACCACTCTAAAATAGCTAGAATTCTAACCTTGTGTCAAGACCTACGGGTGAAGAAGGTCCCCTTCTGAGGGGGTCCGAGCCATCAGTAAGATACCACTCTGAAAGAGCTAGAATTCTAACCTTGTGTCAGATCCTACGGGCGAAGAAGGCCCCGGGAGCCATCAGTGAGATACCACTCTGGAAGAGCTAGAATTCTAGCATTGTGTCGGGACCTACTGGTCAAAGGATAGTCTCAAGTAGACAGTTTCTATGGGGCGTAGGCCTCCGGTTAAGAATGAGAAATAGAATTGGATCGAAGGTGTTATAAATATAGGTGGGATCTAAAGTCCCAGTATTCTTAACACCTCCTTCCTCCTAAAAGGTAATGGAGGTGTGCAAAAGTTTCCTCGGGGCTAGACGAATATTGGCCCTTTGAGTGCCAAAAACTCTTCATGCATATGCTATTAGGTTTAATGTTTGCTATCTTTAACCCGATGGTAAAGAAGCAAGCAATCTGCATGCCTTAGACGTATTCTAGTTTCTAATGCAAGAAACTTGGAGCCTTTAATCGATGTTCCAAGTTACTTTGGTACAATGATACTCAAGAAACTGGATAGTGGCTATTGTGTTGGATTGTCATAGTTAATTCATCTTTGAATAAACATGTAAATAATGATTCTGTTTCTGAAATGCATGTTTACAGGTGAAGTCATTTCAGAAGAGTACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCATGTAGGAGCTGTTGAAGCTGGAGAACGCGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGACTACTTGGTAGGTTATTTTTAAAGCCAACTTGTTATATTACTTTTTAGCTGATAATGCACAGGCCAGCTAAATAAACCAGCGATGCATTGCGTTTTTACTCTTATTTACTCGATGTCATTATCATGGCTGTAATTTTCAAACTTGCTCAGTTCTAGGCCTCAGGTTATTCATTGAATATGGTTAACTGTTATTGTGATTGTGCTTTGGTTTCTATGAAATTTGCTCAGTTTCATTATTAAGTTGCTGAGAATCTGCTGAGAAATGATAATTCTTTTCCGACTCATGGCTGCACTATAGATGGATCCCACGTTGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGTGTGGAAACTTCCCAAGCAATCGCATTTTAAAAACCTTTAGGAGAAGCCCGAAAGGGGAAGCCCAAAAAGAACAATATCGGCTAGCAGTGGACTTCGGTCATTACAAATGGTATCAGAGCCAGACACTGGGCAGTGTGCCAGCAAGGATGCTGGTCCCAAAGGGGAGTGAATTGTGAGATCCCACGTTGATTGGAGAGAGGAAGAAGTGCTAACGAGGACGTTGAGCCCCGAAGGTGGGTGGATTGTGAGACCCACATCGGTTGGGAAGGAAAACGAAACATTTTTTATGAGGGTGTGGAAACCTCTTCCTCGCAGAAGCATTTTAAAAACTTTGAGGTAAAGCCTAAAGAGGACAATATTTGCTAGCGGTGAGCTTGGGCTGGGCTTGGGCCGTTACACTTACTATTTTAAACTTTTCTTTAAGAGCGTAAAGTTATCTTGTTCATGATCTCTTGGTTATATTAATCGGTTGTTATCTATTTATGACAGAGCGAGTTGGCGTGGATGTGGTCGAGTGTGCTTGTGTGATTGAGCTGCACGGACTAAAGGTAAGCCTTTGCAAAAATCTGAGAACAGACCAAAACCTTTTAAGTAGACCTACTAATTACAGAACTTCCCATGGATTCTGTCTAGTTGCATGTTTATGACATGATGAGTATTCTCATTTTCTTTAGTCTCGAAACCGACTCTAGCCATTTCTTCGTCTTGAATTTTATCAGGGTCGTGAAAGATTGGGAGACAAACCTCTGTTTGTTCTAGTTAACGCAGCAGCATGATCGCAGAGCCTTCTTCTGTAACACGACGTGTTCGGTAATGACAATATTATCACGCACCGCTGCTAGAAGTTGAAGTTTTAAAGTAATGCATAATTTTGAAGCCGAGAGTGTTGCTAGAAATAAAAGGGATGGTATTAATTTTGAGTATCTGCAGAAACTTCTTTATTTTGAAGTTAAGTAGTTTATATGTCTCTCTTTCTCTGAATATACCTTATTTGAATGAGTTTATAATGATTACTCTTTTCCTAAGCCAATGTGGAACCGTGTATGTACTCCTAGCAATCTTCCCCTTGAAGGTAGTACCTTTTTAGGCTTCTTTGTCGACTTGATCCGACCAATATCTTGTACGATTGCAAATCACATTGTGGGATATTCCCTAATGGTGACGATGACGATCACCTATCGCATCATCTACCTCCTCCCCTCGAACGAAGATCTACTCCTCTATCGGGGAGTTATTGATGGGTTATTACTTGCTTGTCACCCAAATCACTTTTTGTTTGATGAGGGACCATCTCAATGTTTTAGGAATATAAAGCGGCAACAGTCCAAGCCTAACACTAACAGATATTATTTGTTTTGGCCTGTTATGTATC TAAACGAGTCAAGATTCAATTTATTTCTCCTTCATTTTGGTTTCTAGTTCCGATCACAGCCGGCGATGGAAGCAGCCTCGAATCTCAGTTCCTCACTTCCCCTTTCGCCGTCGCACCACAGGACCACCGCCGTCTTAACTCGTCTTCAGCGGATCGCTTCTTTATCCACAGCCGCCGCCGGAGCCCTCCCGTCGTGTCGTACACATTTGACTCGCCTTCATCAGCGTCGATCCGCGATTTTGCCTCTACGTTGCAATGTGAGGGAGACGGTGGCAGATCAAGAAATGGCGTCTATTGATGTAGAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTTATCCCTGATTTTCCCAAACCAGGGATTTTGTTTCAGGACATTACGACGTTGCTTCTTGATACCAAGGCCTTCAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAAGATATCACTGTGGTTGCAGGGATTGAGGCGAGGGGTTTCATTTTTGGACCTCCCATAGCTCTGGCTATTGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAGTACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCATGTAGGAGCTGTTGAAGCTGGAGAACGCGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGACTACTTGAGCGAGTTGGCGTGGATGTGGTCGAGTGTGCTTGTGTGATTGAGCTGCACGGACTAAAGGGTCGTGAAAGATTGGGAGACAAACCTCTGTTTGTTCTAGTTAACGCAGCAGCATGATCGCAGAGCCTTCTTCTGTAACACGACGTGTTCGGTAATGACAATATTATCACGCACCGCTGCTAGAAGTTGAAGTTTTAAAGTAATGCATAATTTTGAAGCCGAGAGTGTTGCTAGAAATAAAAGGGATGGTATTAATTTTGAGTATCTGCAGAAACTTCTTTATTTTGAAGTTAAGTAGTTTATATGTCTCTCTTTCTCTGAATATACCTTATTTGAATGAGTTTATAATGATTACTCTTTTCCTAAGCCAATGTGGAACCGTGTATGTACTCCTAGCAATCTTCCCCTTGAAGGTAGTACCTTTTTAGGCTTCTTTGTCGACTTGATCCGACCAATATCTTGTACGATTGCAAATCACATTGTGGGATATTCCCTAATGGTGACGATGACGATCACCTATCGCATCATCTACCTCCTCCCCTCGAACGAAGATCTACTCCTCTATCGGGGAGTTATTGATGGGTTATTACTTGCTTGTCACCCAAATCACTTTTTGTTTGATGAGGGACCATCTCAATGTTTTAGGAATATAAAGCGGCAACAGTCCAAGCCTAACACTAACAGATATTATTTGTTTTGGCCTGTTATGTATC ATGGAAGCAGCCTCGAATCTCAGTTCCTCACTTCCCCTTTCGCCGTCGCACCACAGGACCACCGCCGTCTTAACTCGTCTTCAGCGGATCGCTTCTTTATCCACAGCCGCCGCCGGAGCCCTCCCGTCGTGTCGTACACATTTGACTCGCCTTCATCAGCGTCGATCCGCGATTTTGCCTCTACGTTGCAATGTGAGGGAGACGGTGGCAGATCAAGAAATGGCGTCTATTGATGTAGAAGACCCACGCATAGCCAAAATCGCCAAGGCCATTCGAGTTATCCCTGATTTTCCCAAACCAGGGATTTTGTTTCAGGACATTACGACGTTGCTTCTTGATACCAAGGCCTTCAGGGACACTATTGATTTGTTCGTGGAGAGGTACAGAGGGAAAGATATCACTGTGGTTGCAGGGATTGAGGCGAGGGGTTTCATTTTTGGACCTCCCATAGCTCTGGCTATTGGTGCAAAATTTGTTCCCATGAGAAAACCCAAGAAGTTGCCTGGTGAAGTCATTTCAGAAGAGTACTCTTTAGAGTATGGAACAGATAAAATTGAGATGCATGTAGGAGCTGTTGAAGCTGGAGAACGCGCTCTTGTGATAGATGATCTCATTGCAACTGGGGGAACCTTGTGTGCAGCAATAAGACTACTTGAGCGAGTTGGCGTGGATGTGGTCGAGTGTGCTTGTGTGATTGAGCTGCACGGACTAAAGGGTCGTGAAAGATTGGGAGACAAACCTCTGTTTGTTCTAGTTAACGCAGCAGCATGA MEAASNLSSSLPLSPSHHRTTAVLTRLQRIASLSTAAAGALPSCRTHLTRLHQRRSAILPLRCNVRETVADQEMASIDVEDPRIAKIAKAIRVIPDFPKPGILFQDITTLLLDTKAFRDTIDLFVERYRGKDITVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVEAGERALVIDDLIATGGTLCAAIRLLERVGVDVVECACVIELHGLKGRERLGDKPLFVLVNAAA
BLAST of Carg16396 vs. NCBI nr
Match: XP_022951024.1 (adenine phosphoribosyltransferase 1-like [Cucurbita moschata]) HSP 1 Score: 491.5 bits (1264), Expect = 1.7e-135 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
BLAST of Carg16396 vs. NCBI nr
Match: XP_023521838.1 (adenine phosphoribosyltransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481.1 bits (1237), Expect = 2.3e-132 Identity = 251/256 (98.05%), Postives = 253/256 (98.83%), Query Frame = 0
BLAST of Carg16396 vs. NCBI nr
Match: XP_023521338.1 (adenine phosphoribosyltransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 479.2 bits (1232), Expect = 8.9e-132 Identity = 250/256 (97.66%), Postives = 252/256 (98.44%), Query Frame = 0
BLAST of Carg16396 vs. NCBI nr
Match: XP_023002126.1 (adenine phosphoribosyltransferase 1-like [Cucurbita maxima]) HSP 1 Score: 472.2 bits (1214), Expect = 1.1e-129 Identity = 250/257 (97.28%), Postives = 251/257 (97.67%), Query Frame = 0
BLAST of Carg16396 vs. NCBI nr
Match: XP_023546871.1 (adenine phosphoribosyltransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 421.8 bits (1083), Expect = 1.7e-114 Identity = 222/256 (86.72%), Postives = 233/256 (91.02%), Query Frame = 0
BLAST of Carg16396 vs. TAIR10
Match: AT1G27450.3 (adenine phosphoribosyl transferase 1) HSP 1 Score: 291.2 bits (744), Expect = 6.2e-79 Identity = 153/211 (72.51%), Postives = 171/211 (81.04%), Query Frame = 0
BLAST of Carg16396 vs. TAIR10
Match: AT4G22570.1 (adenine phosphoribosyl transferase 3) HSP 1 Score: 278.5 bits (711), Expect = 4.2e-75 Identity = 138/173 (79.77%), Postives = 154/173 (89.02%), Query Frame = 0
BLAST of Carg16396 vs. TAIR10
Match: AT4G12440.2 (adenine phosphoribosyl transferase 4) HSP 1 Score: 273.1 bits (697), Expect = 1.8e-73 Identity = 135/179 (75.42%), Postives = 158/179 (88.27%), Query Frame = 0
BLAST of Carg16396 vs. TAIR10
Match: AT5G11160.1 (adenine phosphoribosyltransferase 5) HSP 1 Score: 242.3 bits (617), Expect = 3.3e-64 Identity = 118/172 (68.60%), Postives = 144/172 (83.72%), Query Frame = 0
BLAST of Carg16396 vs. TAIR10
Match: AT1G80050.1 (adenine phosphoribosyl transferase 2) HSP 1 Score: 236.5 bits (602), Expect = 1.8e-62 Identity = 118/172 (68.60%), Postives = 142/172 (82.56%), Query Frame = 0
BLAST of Carg16396 vs. Swiss-Prot
Match: sp|P31166|APT1_ARATH (Adenine phosphoribosyltransferase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=APT1 PE=1 SV=2) HSP 1 Score: 305.1 bits (780), Expect = 7.5e-82 Identity = 153/186 (82.26%), Postives = 171/186 (91.94%), Query Frame = 0
BLAST of Carg16396 vs. Swiss-Prot
Match: sp|Q43199|APT1_WHEAT (Adenine phosphoribosyltransferase 1 OS=Triticum aestivum OX=4565 GN=APT1 PE=2 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 3.6e-76 Identity = 140/174 (80.46%), Postives = 157/174 (90.23%), Query Frame = 0
BLAST of Carg16396 vs. Swiss-Prot
Match: sp|Q9SUW2|APT3_ARATH (Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=APT3 PE=1 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 7.5e-74 Identity = 138/173 (79.77%), Postives = 154/173 (89.02%), Query Frame = 0
BLAST of Carg16396 vs. Swiss-Prot
Match: sp|Q9SU38|APT4_ARATH (Adenine phosphoribosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=APT4 PE=1 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 3.2e-72 Identity = 135/179 (75.42%), Postives = 158/179 (88.27%), Query Frame = 0
BLAST of Carg16396 vs. Swiss-Prot
Match: sp|Q9LFP0|APT5_ARATH (Adenine phosphoribosyltransferase 5 OS=Arabidopsis thaliana OX=3702 GN=APT5 PE=1 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 6.0e-63 Identity = 118/172 (68.60%), Postives = 144/172 (83.72%), Query Frame = 0
BLAST of Carg16396 vs. TrEMBL
Match: tr|A0A1S3BAN4|A0A1S3BAN4_CUCME (adenine phosphoribosyltransferase 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487844 PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 9.1e-109 Identity = 217/260 (83.46%), Postives = 230/260 (88.46%), Query Frame = 0
BLAST of Carg16396 vs. TrEMBL
Match: tr|A0A0A0LN96|A0A0A0LN96_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354800 PE=3 SV=1) HSP 1 Score: 399.4 bits (1025), Expect = 5.9e-108 Identity = 214/258 (82.95%), Postives = 226/258 (87.60%), Query Frame = 0
BLAST of Carg16396 vs. TrEMBL
Match: tr|A0A2P5EZY8|A0A2P5EZY8_9ROSA (Adenine phosphoribosyl transferase OS=Trema orientalis OX=63057 GN=TorAPT1 PE=3 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.1e-90 Identity = 191/253 (75.49%), Postives = 208/253 (82.21%), Query Frame = 0
BLAST of Carg16396 vs. TrEMBL
Match: tr|A0A1S3BBF7|A0A1S3BBF7_CUCME (adenine phosphoribosyltransferase 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487844 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89 Identity = 172/182 (94.51%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Carg16396 vs. TrEMBL
Match: tr|A0A2P4LMT2|A0A2P4LMT2_QUESU (Adenine phosphoribosyltransferase 1, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_17304 PE=3 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 1.1e-88 Identity = 181/254 (71.26%), Postives = 202/254 (79.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |