Lsi08G013070 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G013070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_5218
Location	chr08 : 21424604 .. 21425212 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGCTGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

mRNA sequence

ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGCTGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

Coding sequence (CDS)

ATGGAGGCAGTCTTGATTCCATTTTATGCTGATCAATCTCGCAGTTTTAAACCCCAAAATTTCTCTCCGGCCACCGTCCACGGTGGTCTTCTCAACTTCCCTCCACCGGCTGTCCCATATTACAGTCACCGCCACCATCAGCAACCGCCACTCCTCCCTTTGCCCCGCCGTCCGTTTCCCCCTCCGGAAACCGGAGCCAGGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCATTCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCATCGGCGGTGAAATCGACGATGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATCTATGGAGAGTTTTAGGATTACGGTCATCGGCGCCGCCGTGCGAAGGTAACAAGAGTTCGGGGACGGCGGCGGAGATGGAGTTTTCGGGGTCGGCGTTCAGCGTTTCGCCGCCGCCGAGTAGTGTTCCGCTTCCGAAATTCTCTCTGAGGCGGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

Protein sequence

MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR

Homology

[Close]

BLAST of Lsi08G013070 vs. TrEMBL
Match: A0A0A0LN70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.1e-79
Identity = 155/202 (76.73%), Postives = 165/202 (81.68%), Query Frame = 1


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           ME V IPF ADQSR F PQNFSPA VHGG LNFP P + Y S R HQQPPLLPLPRRP P
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P E GA    RPK M+ RD SLTPKKSKPIKRS+GP A KST+E VIVDSTNRLGPEPSH
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDL  +LGLR S P CE  +S  TAAE+EFSGSA+S SPPPSSVPLPKFSLRRKVV C
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEA+GVDAGATDNLRRLLR+R
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of Lsi08G013070 vs. TrEMBL
Match: F6H1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.0e-32
Identity = 113/239 (47.28%), Postives = 134/239 (56.07%), Query Frame = 1


Query: 1   MEAVLIPFYADQSRS----------------FKP-QNFSPA-TVHGGLLNFPPP------ 60
           MEAVL+P    QS S                 KP +N SP+  +HGGLL  PPP      
Sbjct: 1   MEAVLVPSSPKQSISPYRQIRNPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSSSF 60

Query: 61  ---AVPYYSHRHHQQPPLLPLPRRPFPPPETGA----RAFCRPKGMKSRDHSLTPKKSKP 120
              A+ +  H HHQQPPLLPL     P P+T A    R+    K  K RD SLTPKKSKP
Sbjct: 61  HSSALLFDHHPHHQQPPLLPL-----PVPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKP 120

Query: 121 IKRSKGPSAVKSTM---EFVIVDSTNRLGPEPSHVPKD-LWRVLGLRSSAPPCEGNKSSG 180
             RS      KST      V+  STNRLGP+P  +PKD + R+L             +SG
Sbjct: 121 SSRSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPKDAVSRIL-------------TSG 180

Query: 181 TAAEME---FSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRL 202
                +   FSGS F++SPPPSS+PLPKFSLR K +SCN EAAG+DAGAT+NLRRLLRL
Sbjct: 181 NIVIEDLDKFSGSVFTLSPPPSSLPLPKFSLRPK-LSCNAEAAGIDAGATNNLRRLLRL 220

[Close]

BLAST of Lsi08G013070 vs. TrEMBL
Match: B9R8B7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1598450 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-29
Identity = 97/209 (46.41%), Postives = 122/209 (58.37%), Query Frame = 1


Query: 19  QNFSPAT----VHGGLLNFPPP----------AVPYY--SHRHHQQPPLLPLPRRPFPPP 78
           +N +P+     +HGG L FPPP          AV  Y    R  QQPPLLPLP       
Sbjct: 41  ENLAPSNNNNIIHGGGLFFPPPPRALSFSYPPAVGLYPIQQRQGQQPPLLPLPVSTIRSL 100

Query: 79  ETGARAFCRP-----KGMKSRDHSLTPKKSK-PIKRSKGPSAVKSTMEFVIVDSTNRLGP 138
            +  R    P     K  ++RDHSLTPKKSK PI R++ P   K   + +I+ ST   GP
Sbjct: 101 NSRTRDLSCPPTTTRKTNRTRDHSLTPKKSKQPIPRNEEP---KQNSKPLIIASTVPSGP 160

Query: 139 EPSHVPKDLWRVLGLRSSA---PPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSL 198
           EP+ +PKD+ +VL   SS+        N + GT      +GS F++SPPPSS+PLPKFS+
Sbjct: 161 EPNDLPKDVSKVLSSSSSSFITGNNNNNNTHGTKDLESLTGSVFTLSPPPSSLPLPKFSV 220

Query: 199 RRKVVSCNVEAAGVDAGATDNLRRLLRLR 203
           R K+ SC  EAAG+DAGATDNLRRLLRLR
Sbjct: 221 RPKL-SCTAEAAGIDAGATDNLRRLLRLR 245

[Close]

BLAST of Lsi08G013070 vs. TrEMBL
Match: M5Y1B3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-29
Identity = 99/224 (44.20%), Postives = 131/224 (58.48%), Query Frame = 1


Query: 13  SRSFKPQNFSPATVHGGLLNFP---------PPAVPYYSHRHHQ----------QPPLLP 72
           S +  P N++   +HGGLL  P         PPA  Y  +R+ Q           PPLLP
Sbjct: 6   SENLAPINYN---IHGGLLQAPSPSLSFSYNPPASLYNQYRYQQLQHVQRQQQQHPPLLP 65

Query: 73  LP--RRP------FPPPETGARAFCRP----KGMKSRDHSLTPKK--SKPIKRSKGPSAV 132
           LP   RP       P   +  R   RP    K   +R  SLTPKK  SKP K+ +     
Sbjct: 66  LPVPNRPPHHHQSLPSLPSRTRGLSRPPTTRKANNARSQSLTPKKPKSKPSKKEEA---- 125

Query: 133 KSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEME-FSGSAFS 192
           K   + +I+ STNRLGP+P+ +PKD+ +VL   SS+     + SS ++ +M+ FSGS F+
Sbjct: 126 KQISDCLIIASTNRLGPDPNDLPKDVTKVLMTSSSS----SSSSSSSSIDMDKFSGSIFT 185

Query: 193 VSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR 203
           +SPPPSS+PLP+FSL+R+ +S N EAAG+DAGATDNLRRLLRLR
Sbjct: 186 LSPPPSSLPLPRFSLQRR-LSRNAEAAGIDAGATDNLRRLLRLR 217

[Close]

BLAST of Lsi08G013070 vs. TrEMBL
Match: V4SL18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-27
Identity = 87/184 (47.28%), Postives = 110/184 (59.78%), Query Frame = 1


Query: 32  NFPPPAVPYYSHRHHQQPPLLPLP-RRPFPPPETGARAFCRPKGMKSRDHSLTPKKS--- 91
           ++PP ++  Y  +  Q PPLLPLP   P P   + +R     K  ++RD SLTPKKS   
Sbjct: 52  SYPPLSLDNYHQQQQQPPPLLPLPIHNPLP---SRSRYPINRKSNRTRDQSLTPKKSNSK 111

Query: 92  KPIKRSKGPSAV------KSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGN 151
           +P KR             K+  E  IV S N  GP+P+ +PKD+ +VL            
Sbjct: 112 RPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDVSKVL------------ 171

Query: 152 KSSGTAAEME---FSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRL 203
            S+G  A  +   FSGS F+VSPPPSS+PLPKF+LR K++SCN EAAGVDAGATDNLRRL
Sbjct: 172 -SAGIVAVKDLEKFSGSLFTVSPPPSSLPLPKFALRPKLISCNAEAAGVDAGATDNLRRL 219

[Close]

BLAST of Lsi08G013070 vs. TAIR10
Match: AT1G20070.1 (AT1G20070.1 unknown protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.1e-06
Identity = 55/182 (30.22%), Postives = 80/182 (43.96%), Query Frame = 1


Query: 22  SPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFPPPETGARAFCRPKGMKSRDHS 81
           +P +  G    +PPP         + QPPLLPLPR              RP+ + +    
Sbjct: 44  NPTSSWGSSPAYPPP-------HSYSQPPLLPLPRVNSSTVPLQRVNSSRPR-VNNNSSL 103

Query: 82  LTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGN 141
               ++K I  +    A     EF+      R G  P    +       LR      +G 
Sbjct: 104 NRVAQTKAISETHMKKA-----EFIESARLTRTGSVPIQANQ-------LRDFPEGFDG- 163

Query: 142 KSSGTAAEMEFSGSAFSV-SPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLR 201
                     + G A  + SPPPSS+P+P+FS++ K+  CNVEAAG    AT+N+RR+L+
Sbjct: 164 ----------YPGPAIMLLSPPPSSLPMPRFSIKPKL-RCNVEAAGKSDVATNNIRRVLQ 193

Query: 202 LR 203
           LR
Sbjct: 224 LR 193

[Close]

BLAST of Lsi08G013070 vs. NCBI nr
Match: gi|700207133|gb|KGN62252.1| (hypothetical protein Csa_2G345930 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 1.6e-79
Identity = 155/202 (76.73%), Postives = 165/202 (81.68%), Query Frame = 1


Query: 1   MEAVLIPFYADQSRSFKPQNFSPATVHGGLLNFPPPAVPYYSHRHHQQPPLLPLPRRPFP 60
           ME V IPF ADQSR F PQNFSPA VHGG LNFP P + Y S R HQQPPLLPLPRRP P
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PPETGARAFCRPKGMKSRDHSLTPKKSKPIKRSKGPSAVKSTMEFVIVDSTNRLGPEPSH 120
           P E GA    RPK M+ RD SLTPKKSKPIKRS+GP A KST+E VIVDSTNRLGPEPSH
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVVSC 180
           VPKDL  +LGLR S P CE  +S  TAAE+EFSGSA+S SPPPSSVPLPKFSLRRKVV C
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 203
           NVEA+GVDAGATDNLRRLLR+R
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of Lsi08G013070 vs. NCBI nr
Match: gi|359492270|ref|XP_003634392.1| (PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera])

HSP 1 Score: 146.7 bits (369), Expect = 4.2e-32
Identity = 113/239 (47.28%), Postives = 134/239 (56.07%), Query Frame = 1


Query: 1   MEAVLIPFYADQSRS----------------FKP-QNFSPA-TVHGGLLNFPPP------ 60
           MEAVL+P    QS S                 KP +N SP+  +HGGLL  PPP      
Sbjct: 1   MEAVLVPSSPKQSISPYRQIRNPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSSSF 60

Query: 61  ---AVPYYSHRHHQQPPLLPLPRRPFPPPETGA----RAFCRPKGMKSRDHSLTPKKSKP 120
              A+ +  H HHQQPPLLPL     P P+T A    R+    K  K RD SLTPKKSKP
Sbjct: 61  HSSALLFDHHPHHQQPPLLPL-----PVPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKP 120

Query: 121 IKRSKGPSAVKSTM---EFVIVDSTNRLGPEPSHVPKD-LWRVLGLRSSAPPCEGNKSSG 180
             RS      KST      V+  STNRLGP+P  +PKD + R+L             +SG
Sbjct: 121 SSRSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPKDAVSRIL-------------TSG 180

Query: 181 TAAEME---FSGSAFSVSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRL 202
                +   FSGS F++SPPPSS+PLPKFSLR K +SCN EAAG+DAGAT+NLRRLLRL
Sbjct: 181 NIVIEDLDKFSGSVFTLSPPPSSLPLPKFSLRPK-LSCNAEAAGIDAGATNNLRRLLRL 220

[Close]

BLAST of Lsi08G013070 vs. NCBI nr
Match: gi|1009135162|ref|XP_015884838.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 143.7 bits (361), Expect = 3.6e-31
Identity = 96/213 (45.07%), Postives = 125/213 (58.69%), Query Frame = 1


Query: 15  SFKPQNFSPATVHGGLLNFPPPAVPYY----SHRHHQQPPLLPLP-RRPF---PPPETGA 74
           S   +N +P   HGGLL+ PPP++ Y      H +++QPPLLPLP  RP     PP    
Sbjct: 28  SIPSENLAPINSHGGLLSAPPPSLSYSYPPTHHHYYRQPPLLPLPVSRPHHGHSPPSRSR 87

Query: 75  RAFCRP---KGMKSRDHSL--TPKKSKP------------IKRSKGPSAVKSTMEFVIVD 134
              C P   K  K+RD+ +  TPKKSK              K+     ++KS    +IV 
Sbjct: 88  GLSCPPTTGKTNKARDNPIATTPKKSKSKPPCVSKIDQEETKQQLHTKSMKSGTGSLIVT 147

Query: 135 STNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLP 194
           STNRLGPEP+ +PKD+ +VL   +     EG+         +FSGS FS++PPPSS+PLP
Sbjct: 148 STNRLGPEPNDLPKDVSKVLWKSNCCVSIEGDLD-------KFSGSVFSLAPPPSSLPLP 207

Query: 195 KFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR 203
           +FS+R K +SCN EA G+DAGATDNL RLLRLR
Sbjct: 208 RFSVRPK-LSCNAEATGIDAGATDNLCRLLRLR 232

[Close]

BLAST of Lsi08G013070 vs. NCBI nr
Match: gi|255538990|ref|XP_002510560.1| (PREDICTED: uncharacterized protein LOC8274687 [Ricinus communis])

HSP 1 Score: 137.1 bits (344), Expect = 3.4e-29
Identity = 97/209 (46.41%), Postives = 122/209 (58.37%), Query Frame = 1


Query: 19  QNFSPAT----VHGGLLNFPPP----------AVPYY--SHRHHQQPPLLPLPRRPFPPP 78
           +N +P+     +HGG L FPPP          AV  Y    R  QQPPLLPLP       
Sbjct: 41  ENLAPSNNNNIIHGGGLFFPPPPRALSFSYPPAVGLYPIQQRQGQQPPLLPLPVSTIRSL 100

Query: 79  ETGARAFCRP-----KGMKSRDHSLTPKKSK-PIKRSKGPSAVKSTMEFVIVDSTNRLGP 138
            +  R    P     K  ++RDHSLTPKKSK PI R++ P   K   + +I+ ST   GP
Sbjct: 101 NSRTRDLSCPPTTTRKTNRTRDHSLTPKKSKQPIPRNEEP---KQNSKPLIIASTVPSGP 160

Query: 139 EPSHVPKDLWRVLGLRSSA---PPCEGNKSSGTAAEMEFSGSAFSVSPPPSSVPLPKFSL 198
           EP+ +PKD+ +VL   SS+        N + GT      +GS F++SPPPSS+PLPKFS+
Sbjct: 161 EPNDLPKDVSKVLSSSSSSFITGNNNNNNTHGTKDLESLTGSVFTLSPPPSSLPLPKFSV 220

Query: 199 RRKVVSCNVEAAGVDAGATDNLRRLLRLR 203
           R K+ SC  EAAG+DAGATDNLRRLLRLR
Sbjct: 221 RPKL-SCTAEAAGIDAGATDNLRRLLRLR 245

[Close]

BLAST of Lsi08G013070 vs. NCBI nr
Match: gi|596294279|ref|XP_007226809.1| (hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica])

HSP 1 Score: 136.7 bits (343), Expect = 4.4e-29
Identity = 99/224 (44.20%), Postives = 131/224 (58.48%), Query Frame = 1


Query: 13  SRSFKPQNFSPATVHGGLLNFP---------PPAVPYYSHRHHQ----------QPPLLP 72
           S +  P N++   +HGGLL  P         PPA  Y  +R+ Q           PPLLP
Sbjct: 6   SENLAPINYN---IHGGLLQAPSPSLSFSYNPPASLYNQYRYQQLQHVQRQQQQHPPLLP 65

Query: 73  LP--RRP------FPPPETGARAFCRP----KGMKSRDHSLTPKK--SKPIKRSKGPSAV 132
           LP   RP       P   +  R   RP    K   +R  SLTPKK  SKP K+ +     
Sbjct: 66  LPVPNRPPHHHQSLPSLPSRTRGLSRPPTTRKANNARSQSLTPKKPKSKPSKKEEA---- 125

Query: 133 KSTMEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPCEGNKSSGTAAEME-FSGSAFS 192
           K   + +I+ STNRLGP+P+ +PKD+ +VL   SS+     + SS ++ +M+ FSGS F+
Sbjct: 126 KQISDCLIIASTNRLGPDPNDLPKDVTKVLMTSSSS----SSSSSSSSIDMDKFSGSIFT 185

Query: 193 VSPPPSSVPLPKFSLRRKVVSCNVEAAGVDAGATDNLRRLLRLR 203
           +SPPPSS+PLP+FSL+R+ +S N EAAG+DAGATDNLRRLLRLR
Sbjct: 186 LSPPPSSLPLPRFSLQRR-LSRNAEAAGIDAGATDNLRRLLRLR 217

The following BLAST results are available for this feature:

BLAST of Lsi08G013070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi08G013070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN70_CUCSA	1.1e-79	76.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1	[more]
F6H1M4_VITVI	3.0e-32	47.28	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=...	[more]
B9R8B7_RICCO	2.3e-29	46.41	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1598450 PE=4 SV=1	[more]
M5Y1B3_PRUPE	3.1e-29	44.20	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 S...	[more]
V4SL18_9ROSI	1.7e-27	47.28	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1	[more]

BLAST of Lsi08G013070 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20070.1	1.1e-06	30.22	unknown protein	[more]

BLAST of Lsi08G013070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207133\|gb\|KGN62252.1\|	1.6e-79	76.73	hypothetical protein Csa_2G345930 [Cucumis sativus]	[more]
gi\|359492270\|ref\|XP_003634392.1\|	4.2e-32	47.28	PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera]	[more]
gi\|1009135162\|ref\|XP_015884838.1\|	3.6e-31	45.07	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Zizi...	[more]
gi\|255538990\|ref\|XP_002510560.1\|	3.4e-29	46.41	PREDICTED: uncharacterized protein LOC8274687 [Ricinus communis]	[more]
gi\|596294279\|ref\|XP_007226809.1\|	4.4e-29	44.20	hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G013070.1	Lsi08G013070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 195..202 scor
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 141..202 score: 3.0E-42coord: 5..124 score: 3.0
None	No IPR available	PANTHER	PTHR33670:SF2	SUBFAMILY NOT NAMED	coord: 5..124 score: 3.0E-42coord: 141..202 score: 3.0
None	No IPR available	PFAM	PF15365	PNRC	coord: 152..201 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G013070	Csa2G345930	Cucumber (Chinese Long) v2	culsiB143
Lsi08G013070	CSPI02G16680	Wild cucumber (PI 183967)	cpilsiB142
Lsi08G013070	CmoCh05G003190	Cucurbita moschata (Rifu)	cmolsiB731
Lsi08G013070	CmoCh12G003510	Cucurbita moschata (Rifu)	cmolsiB175
Lsi08G013070	Cla022411	Watermelon (97103) v1	lsiwmB465
Lsi08G013070	MELO3C011356	Melon (DHL92) v3.5.1	lsimeB474
Lsi08G013070	ClCG08G014190	Watermelon (Charleston Gray)	lsiwcgB438
Lsi08G013070	MELO3C011356.2	Melon (DHL92) v3.6.1	lsimedB493
Lsi08G013070	Cla97C08G157740	Watermelon (97103) v2	lsiwmbB444
Lsi08G013070	Bhi04G000107	Wax gourd	lsiwgoB592
Lsi08G013070	Cp4.1LG07g03520	Cucurbita pepo (Zucchini)	cpelsiB685
Lsi08G013070	Cp4.1LG11g02570	Cucurbita pepo (Zucchini)	cpelsiB100
Lsi08G013070	Carg03984	Silver-seed gourd	carlsiB898
Lsi08G013070	Carg09396	Silver-seed gourd	carlsiB128
Lsi08G013070	CsaV3_2G024250	Cucumber (Chinese Long) v3	cuclsiB156

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G013070	Cucumber (Gy14) v2	cgyblsiB450
Lsi08G013070	Melon (DHL92) v3.6.1	lsimedB512
Lsi08G013070	Silver-seed gourd	carlsiB371
Lsi08G013070	Cucumber (Chinese Long) v3	cuclsiB158
Lsi08G013070	Cucumber (Chinese Long) v3	cuclsiB515
Lsi08G013070	Watermelon (97103) v2	lsiwmbB425
Lsi08G013070	Wax gourd	lsiwgoB614
Lsi08G013070	Bottle gourd (USVL1VR-Ls)	lsilsiB085
Lsi08G013070	Cucumber (Gy14) v1	cgylsiB028
Lsi08G013070	Cucurbita maxima (Rimu)	cmalsiB184
Lsi08G013070	Cucurbita maxima (Rimu)	cmalsiB619
Lsi08G013070	Cucurbita maxima (Rimu)	cmalsiB739
Lsi08G013070	Cucurbita maxima (Rimu)	cmalsiB808
Lsi08G013070	Cucurbita moschata (Rifu)	cmolsiB608
Lsi08G013070	Cucurbita moschata (Rifu)	cmolsiB794
Lsi08G013070	Cucurbita pepo (Zucchini)	cpelsiB069
Lsi08G013070	Cucurbita pepo (Zucchini)	cpelsiB410
Lsi08G013070	Wild cucumber (PI 183967)	cpilsiB493
Lsi08G013070	Cucumber (Chinese Long) v2	culsiB484
Lsi08G013070	Melon (DHL92) v3.5.1	lsimeB494
Lsi08G013070	Watermelon (Charleston Gray)	lsiwcgB427
Lsi08G013070	Watermelon (97103) v1	lsiwmB490