Csa2G345930 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G345930
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr2 : 15436504 .. 15437658 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAGTCTTCTCTTACAATTTTAATCGCTAACGTTTCCTCTGTAGATGGGTTGCTGAAAAATCCCATTATCCATTCTTTGAGTCAATCAAACATATACATTTTCTAACTTTTTTTACATTCTGGGTTCTATTAGTTTCTGTTTTGCAAAAAAAGAGAAACCCTTCCTTTTTTCTTCTTTTGTGGTTCAAATTCATACGAATTTCTTCTTCACGATCTTCTATCTTTTTGTTTCGATTGGGCCTCTGTTTTCTTTTTCCCTTTTAACGTTAGCGTTTTGATTTTTGTTTGATTTTTTCAGGTTTAGATCTTTGTAAACTGCAGCAATGGAGGTAGTTTTTATTCCATTTTCTGCTGATCAATCTCGCGGTTTTAATCCTCAAAATTTCTCTCCGGCCAACGTTCACGGCGGTTTTCTTAACTTCCCTCTGCCGGGAATCTCATATAACAGTTGCCGTCAACACCAGCAGCCGCCACTTCTCCCTTTGCCCCGCCGTCCACTTCCCCCTTCGGAAATCGGGGCCACAGTGTCCTCCCGCCCAAAGTGTATGGAATTCAGAGACCAATCTCTTACCCCAAAGAAATCAAAACCAATAAAACGAAGTAGAGGTCCACCGGCGGCGAAATCGACGGTGGAATTAGTGATCGTTGATTCCACGAATCGATTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATTTGTTGACACTTTTAGGATTACGGCCGTCGGTGCCGCTTTGCGAAAGTACCCGGAGTTGGGAGACGGCGGCGGAAATTGAGTTTTCGGGGTCGGCATACAGCCAATCGCCGCCACCGAGTAGCGTTCCGCTTCCGAAATTCTCTCTGAGACGGAAGGTGGTTGGTTGTAACGTGGAGGCCTCCGGAGTAGACGCCGGCGCCACAGACAATCTGAGGCGACTATTGCGCATCCGATGAAGGAAGAAGCTTTAGGGTTTGATTTTTTGGAAAGGTATTTGTTTGTGTGTGGTTTTTGTGATCACCACCTGGGTTTTTTTGAAATGGGGAGGTGAACAAACCAAAATCTGAAAATCTCTACTTACCTTTAAAGTACACACATTAGGGTTTAAAGTACATTATGGCTTGTTGTAATTCAACAAAGAAGATGGTTAAAAATGGTCATGGTGCTCTCTCAACTT

mRNA sequence

ATGGAGGTAGTTTTTATTCCATTTTCTGCTGATCAATCTCGCGGTTTTAATCCTCAAAATTTCTCTCCGGCCAACGTTCACGGCGGTTTTCTTAACTTCCCTCTGCCGGGAATCTCATATAACAGTTGCCGTCAACACCAGCAGCCGCCACTTCTCCCTTTGCCCCGCCGTCCACTTCCCCCTTCGGAAATCGGGGCCACAGTGTCCTCCCGCCCAAAGTGTATGGAATTCAGAGACCAATCTCTTACCCCAAAGAAATCAAAACCAATAAAACGAAGTAGAGGTCCACCGGCGGCGAAATCGACGGTGGAATTAGTGATCGTTGATTCCACGAATCGATTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATTTGTTGACACTTTTAGGATTACGGCCGTCGGTGCCGCTTTGCGAAAGTACCCGGAGTTGGGAGACGGCGGCGGAAATTGAGTTTTCGGGGTCGGCATACAGCCAATCGCCGCCACCGAGTAGCGTTCCGCTTCCGAAATTCTCTCTGAGACGGAAGGTGGTTGGTTGTAACGTGGAGGCCTCCGGAGTAGACGCCGGCGCCACAGACAATCTGAGGCGACTATTGCGCATCCGATGA

Coding sequence (CDS)

ATGGAGGTAGTTTTTATTCCATTTTCTGCTGATCAATCTCGCGGTTTTAATCCTCAAAATTTCTCTCCGGCCAACGTTCACGGCGGTTTTCTTAACTTCCCTCTGCCGGGAATCTCATATAACAGTTGCCGTCAACACCAGCAGCCGCCACTTCTCCCTTTGCCCCGCCGTCCACTTCCCCCTTCGGAAATCGGGGCCACAGTGTCCTCCCGCCCAAAGTGTATGGAATTCAGAGACCAATCTCTTACCCCAAAGAAATCAAAACCAATAAAACGAAGTAGAGGTCCACCGGCGGCGAAATCGACGGTGGAATTAGTGATCGTTGATTCCACGAATCGATTGGGGCCGGAGCCGAGCCACGTTCCTAAAGATTTGTTGACACTTTTAGGATTACGGCCGTCGGTGCCGCTTTGCGAAAGTACCCGGAGTTGGGAGACGGCGGCGGAAATTGAGTTTTCGGGGTCGGCATACAGCCAATCGCCGCCACCGAGTAGCGTTCCGCTTCCGAAATTCTCTCTGAGACGGAAGGTGGTTGGTTGTAACGTGGAGGCCTCCGGAGTAGACGCCGGCGCCACAGACAATCTGAGGCGACTATTGCGCATCCGATGA

Protein sequence

MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLPPSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRIR*

Homology

[Close]

BLAST of Csa2G345930 vs. TrEMBL
Match: A0A0A0LN70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 5.0e-112
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60
           MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120
           PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEASGVDAGATDNLRRLLRIR 203
           NVEASGVDAGATDNLRRLLRIR
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of Csa2G345930 vs. TrEMBL
Match: F6H1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-31
Identity = 99/233 (42.49%), Postives = 129/233 (55.36%), Query Frame = 1


Query: 1   MEVVFIPFSADQSRG-----FNP------------QNFSPA-NVHGGFLNFPLPGIS--- 60
           ME V +P S  QS        NP            +N SP+ N+HGG L  P P +S   
Sbjct: 1   MEAVLVPSSPKQSISPYRQIRNPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSSSF 60

Query: 61  ------YNSCRQHQQPPLLPLPRRPLPPSEIGATVSSRP--KCMEFRDQSLTPKKSKPIK 120
                 ++    HQQPPLLPLP   +P +       S P  K  + RDQSLTPKKSKP  
Sbjct: 61  HSSALLFDHHPHHQQPPLLPLP---VPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSS 120

Query: 121 RSRGPPAAKSTV---ELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAA 180
           RS     +KST      V+  STNRLGP+P  +PKD ++ +    ++ + +  +      
Sbjct: 121 RSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPKDAVSRILTSGNIVIEDLDK------ 180

Query: 181 EIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRI 202
              FSGS ++ SPPPSS+PLPKFSLR K + CN EA+G+DAGAT+NLRRLLR+
Sbjct: 181 ---FSGSVFTLSPPPSSLPLPKFSLRPK-LSCNAEAAGIDAGATNNLRRLLRL 220

[Close]

BLAST of Csa2G345930 vs. TrEMBL
Match: M5Y1B3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.5e-28
Identity = 94/219 (42.92%), Postives = 121/219 (55.25%), Query Frame = 1


Query: 19  QNFSPAN--VHGGFLNFPLPGIS---------YNSCR----------QHQQPPLLPLPRR 78
           +N +P N  +HGG L  P P +S         YN  R          Q Q PPLLPLP  
Sbjct: 7   ENLAPINYNIHGGLLQAPSPSLSFSYNPPASLYNQYRYQQLQHVQRQQQQHPPLLPLPVP 66

Query: 79  PLPPSEIGATVS--------SRP----KCMEFRDQSLTPKK--SKPIKRSRGPPAAKSTV 138
             PP    +  S        SRP    K    R QSLTPKK  SKP K+      AK   
Sbjct: 67  NRPPHHHQSLPSLPSRTRGLSRPPTTRKANNARSQSLTPKKPKSKPSKKEE----AKQIS 126

Query: 139 ELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPP 198
           + +I+ STNRLGP+P+ +PKD+  +L    S     S+ S +     +FSGS ++ SPPP
Sbjct: 127 DCLIIASTNRLGPDPNDLPKDVTKVLMTSSSSSSSSSSSSIDMD---KFSGSIFTLSPPP 186

Query: 199 SSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRIR 203
           SS+PLP+FSL+R+ +  N EA+G+DAGATDNLRRLLR+R
Sbjct: 187 SSLPLPRFSLQRR-LSRNAEAAGIDAGATDNLRRLLRLR 217

[Close]

BLAST of Csa2G345930 vs. TrEMBL
Match: V4SL18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-26
Identity = 91/219 (41.55%), Postives = 119/219 (54.34%), Query Frame = 1


Query: 5   FIPFSADQSRGFNPQNFSPA---NVHGGFLNFP------LPGISYNSCRQHQQ--PPLLP 64
           F P+   +++  N + F      N+H G L  P       P +S ++  Q QQ  PPLLP
Sbjct: 14  FSPYEQMKNQQKNTRGFVSKRGENMHRGILLAPPLTTYSYPPLSLDNYHQQQQQPPPLLP 73

Query: 65  LP-RRPLPPSEIGATVSSRPKCMEFRDQSLTPKKS---KPIKRSRGP------PAAKSTV 124
           LP   PLP     +      K    RDQSLTPKKS   +P KR          P  K+  
Sbjct: 74  LPIHNPLPSR---SRYPINRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTIS 133

Query: 125 ELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPP 184
           E  IV S N  GP+P+ +PKD+  +L          + +  E     +FSGS ++ SPPP
Sbjct: 134 ESFIVTSVNPSGPDPNDLPKDVSKVLSAG-----IVAVKDLE-----KFSGSLFTVSPPP 193

Query: 185 SSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRIR 203
           SS+PLPKF+LR K++ CN EA+GVDAGATDNLRRLLR+R
Sbjct: 194 SSLPLPKFALRPKLISCNAEAAGVDAGATDNLRRLLRLR 219

[Close]

BLAST of Csa2G345930 vs. TrEMBL
Match: A0A067H1W0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.4e-26
Identity = 91/219 (41.55%), Postives = 118/219 (53.88%), Query Frame = 1


Query: 5   FIPFSADQSRGFNPQNFSPA---NVHGGFLNFP------LPGISYNSCRQHQQ--PPLLP 64
           F P+   +++  N + F      N+H G L  P       P +S ++  Q QQ  PPLLP
Sbjct: 14  FSPYEQMKNQQKNTRGFVSKRGENMHRGILLAPPLTTYSYPPLSLDNYHQQQQQPPPLLP 73

Query: 65  LP-RRPLPPSEIGATVSSRPKCMEFRDQSLTPKKS---KPIKRSRGP------PAAKSTV 124
           LP   PLP     +      K    RDQSLTPKKS   +P KR          P  K+  
Sbjct: 74  LPIHNPLPSR---SRYPINRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTIS 133

Query: 125 ELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPP 184
           E  IV S N  GP+P+ +PKD+  +L          + +  E     +FSGS ++ SPPP
Sbjct: 134 ESFIVTSVNPSGPDPNDLPKDVSKVLSAG-----IVAVKDLE-----KFSGSLFTVSPPP 193

Query: 185 SSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRIR 203
           SS+PLPKF+LR K + CN EA+GVDAGATDNLRRLLR+R
Sbjct: 194 SSLPLPKFALRPKPISCNAEAAGVDAGATDNLRRLLRLR 219

[Close]

BLAST of Csa2G345930 vs. TAIR10
Match: AT1G20070.1 (AT1G20070.1 unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-08
Identity = 55/183 (30.05%), Postives = 77/183 (42.08%), Query Frame = 1


Query: 28  GGFLNFPL-PGISYNSC------RQHQQPPLLPLPRRPLPPSEIGATVSSRPKCMEFRDQ 87
           GG L  PL P  S+ S         + QPPLLPLPR       +    SSRP        
Sbjct: 36  GGSLALPLNPTSSWGSSPAYPPPHSYSQPPLLPLPRVNSSTVPLQRVNSSRP-------- 95

Query: 88  SLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPL-CE 147
                      R     +     +   +  T+    E   +    LT  G   SVP+   
Sbjct: 96  -----------RVNNNSSLNRVAQTKAISETHMKKAE--FIESARLTRTG---SVPIQAN 155

Query: 148 STRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLL 203
             R +    +     +    SPPPSS+P+P+FS++ K + CNVEA+G    AT+N+RR+L
Sbjct: 156 QLRDFPEGFDGYPGPAIMLLSPPPSSLPMPRFSIKPK-LRCNVEAAGKSDVATNNIRRVL 193

[Close]

BLAST of Csa2G345930 vs. NCBI nr
Match: gi|700207133|gb|KGN62252.1| (hypothetical protein Csa_2G345930 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 7.1e-112
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1


Query: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60
           MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120
           PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180
           VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEASGVDAGATDNLRRLLRIR 203
           NVEASGVDAGATDNLRRLLRIR
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]

BLAST of Csa2G345930 vs. NCBI nr
Match: gi|359492270|ref|XP_003634392.1| (PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera])

HSP 1 Score: 142.5 bits (358), Expect = 8.1e-31
Identity = 99/233 (42.49%), Postives = 129/233 (55.36%), Query Frame = 1


Query: 1   MEVVFIPFSADQSRG-----FNP------------QNFSPA-NVHGGFLNFPLPGIS--- 60
           ME V +P S  QS        NP            +N SP+ N+HGG L  P P +S   
Sbjct: 1   MEAVLVPSSPKQSISPYRQIRNPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSSSF 60

Query: 61  ------YNSCRQHQQPPLLPLPRRPLPPSEIGATVSSRP--KCMEFRDQSLTPKKSKPIK 120
                 ++    HQQPPLLPLP   +P +       S P  K  + RDQSLTPKKSKP  
Sbjct: 61  HSSALLFDHHPHHQQPPLLPLP---VPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSS 120

Query: 121 RSRGPPAAKSTV---ELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAA 180
           RS     +KST      V+  STNRLGP+P  +PKD ++ +    ++ + +  +      
Sbjct: 121 RSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPKDAVSRILTSGNIVIEDLDK------ 180

Query: 181 EIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRI 202
              FSGS ++ SPPPSS+PLPKFSLR K + CN EA+G+DAGAT+NLRRLLR+
Sbjct: 181 ---FSGSVFTLSPPPSSLPLPKFSLRPK-LSCNAEAAGIDAGATNNLRRLLRL 220

[Close]

BLAST of Csa2G345930 vs. NCBI nr
Match: gi|596294279|ref|XP_007226809.1| (hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica])

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-28
Identity = 94/219 (42.92%), Postives = 121/219 (55.25%), Query Frame = 1


Query: 19  QNFSPAN--VHGGFLNFPLPGIS---------YNSCR----------QHQQPPLLPLPRR 78
           +N +P N  +HGG L  P P +S         YN  R          Q Q PPLLPLP  
Sbjct: 7   ENLAPINYNIHGGLLQAPSPSLSFSYNPPASLYNQYRYQQLQHVQRQQQQHPPLLPLPVP 66

Query: 79  PLPPSEIGATVS--------SRP----KCMEFRDQSLTPKK--SKPIKRSRGPPAAKSTV 138
             PP    +  S        SRP    K    R QSLTPKK  SKP K+      AK   
Sbjct: 67  NRPPHHHQSLPSLPSRTRGLSRPPTTRKANNARSQSLTPKKPKSKPSKKEE----AKQIS 126

Query: 139 ELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPP 198
           + +I+ STNRLGP+P+ +PKD+  +L    S     S+ S +     +FSGS ++ SPPP
Sbjct: 127 DCLIIASTNRLGPDPNDLPKDVTKVLMTSSSSSSSSSSSSIDMD---KFSGSIFTLSPPP 186

Query: 199 SSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRIR 203
           SS+PLP+FSL+R+ +  N EA+G+DAGATDNLRRLLR+R
Sbjct: 187 SSLPLPRFSLQRR-LSRNAEAAGIDAGATDNLRRLLRLR 217

[Close]

BLAST of Csa2G345930 vs. NCBI nr
Match: gi|694316652|ref|XP_009334864.1| (PREDICTED: uncharacterized protein LOC103927644 [Pyrus x bretschneideri])

HSP 1 Score: 129.4 bits (324), Expect = 7.1e-27
Identity = 94/216 (43.52%), Postives = 122/216 (56.48%), Query Frame = 1


Query: 19  QNFSPAN--VHGGFLNFPLPGIS-YNSCR----------QHQQPPLLPLP--------RR 78
           +N +P N   HGG L  P P +S +N  R          QHQ PPLLPLP         R
Sbjct: 24  ENLAPINNNFHGGLLQAPPPSLSLFNHYRYQHLQQAQRQQHQNPPLLPLPVPNRPPHHHR 83

Query: 79  PLPPSEIGATVSSRPKC------MEFRDQSLTPKK--SKPIKRSRGPPAA-KSTVELVIV 138
            LP        +SRP        M  R QSLTPKK  SKP K+        K+  E +I+
Sbjct: 84  SLPSLPSRTRGASRPPAARKTNNMITRSQSLTPKKPKSKPSKKEEANKQDFKAISECLII 143

Query: 139 DSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIE-FSGSAYSQSPPPSSVP 198
            STNRLGP+P+ +PKD+  +L    S  + +S        ++E FSGS ++ SPPPSS+P
Sbjct: 144 ASTNRLGPDPNDLPKDVTRVL----SSSIGKSLGGGGGVGDMEKFSGSIFTLSPPPSSLP 203

Query: 199 LPKFSLRRKVVGCNVE-ASGVDAGATDNLRRLLRIR 203
           LP+FSL+ + +GCN E A+G+DAGATDNL RLLR+R
Sbjct: 204 LPRFSLQPR-LGCNAEAAAGIDAGATDNLCRLLRLR 234

[Close]

BLAST of Csa2G345930 vs. NCBI nr
Match: gi|567885299|ref|XP_006435208.1| (hypothetical protein CICLE_v10002425mg [Citrus clementina])

HSP 1 Score: 127.1 bits (318), Expect = 3.5e-26
Identity = 91/219 (41.55%), Postives = 119/219 (54.34%), Query Frame = 1


Query: 5   FIPFSADQSRGFNPQNFSPA---NVHGGFLNFP------LPGISYNSCRQHQQ--PPLLP 64
           F P+   +++  N + F      N+H G L  P       P +S ++  Q QQ  PPLLP
Sbjct: 14  FSPYEQMKNQQKNTRGFVSKRGENMHRGILLAPPLTTYSYPPLSLDNYHQQQQQPPPLLP 73

Query: 65  LP-RRPLPPSEIGATVSSRPKCMEFRDQSLTPKKS---KPIKRSRGP------PAAKSTV 124
           LP   PLP     +      K    RDQSLTPKKS   +P KR          P  K+  
Sbjct: 74  LPIHNPLPSR---SRYPINRKSNRTRDQSLTPKKSNSKRPNKREDESKIELLKPIEKTIS 133

Query: 125 ELVIVDSTNRLGPEPSHVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPP 184
           E  IV S N  GP+P+ +PKD+  +L          + +  E     +FSGS ++ SPPP
Sbjct: 134 ESFIVTSVNPSGPDPNDLPKDVSKVLSAG-----IVAVKDLE-----KFSGSLFTVSPPP 193

Query: 185 SSVPLPKFSLRRKVVGCNVEASGVDAGATDNLRRLLRIR 203
           SS+PLPKF+LR K++ CN EA+GVDAGATDNLRRLLR+R
Sbjct: 194 SSLPLPKFALRPKLISCNAEAAGVDAGATDNLRRLLRLR 219

The following BLAST results are available for this feature:

BLAST of Csa2G345930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN70_CUCSA	5.0e-112	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1	[more]
F6H1M4_VITVI	5.6e-31	42.49	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=...	[more]
M5Y1B3_PRUPE	1.5e-28	42.92	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 S...	[more]
V4SL18_9ROSI	2.4e-26	41.55	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1	[more]
A0A067H1W0_CITSI	5.4e-26	41.55	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1	[more]

BLAST of Csa2G345930 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20070.1	2.0e-08	30.05	unknown protein	[more]

BLAST of Csa2G345930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207133\|gb\|KGN62252.1\|	7.1e-112	100.00	hypothetical protein Csa_2G345930 [Cucumis sativus]	[more]
gi\|359492270\|ref\|XP_003634392.1\|	8.1e-31	42.49	PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera]	[more]
gi\|596294279\|ref\|XP_007226809.1\|	2.2e-28	42.92	hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica]	[more]
gi\|694316652\|ref\|XP_009334864.1\|	7.1e-27	43.52	PREDICTED: uncharacterized protein LOC103927644 [Pyrus x bretschneideri]	[more]
gi\|567885299\|ref\|XP_006435208.1\|	3.5e-26	41.55	hypothetical protein CICLE_v10002425mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU090223	cucumber EST collection version 3.0	transcribed_cluster
CU098481	cucumber EST collection version 3.0	transcribed_cluster
CU108170	cucumber EST collection version 3.0	transcribed_cluster
CU114444	cucumber EST collection version 3.0	transcribed_cluster
CU139519	cucumber EST collection version 3.0	transcribed_cluster
CU141458	cucumber EST collection version 3.0	transcribed_cluster
CU150627	cucumber EST collection version 3.0	transcribed_cluster
CU154430	cucumber EST collection version 3.0	transcribed_cluster
CU158731	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G345930.1	Csa2G345930.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU139519	CU139519	transcribed_cluster
CU158731	CU158731	transcribed_cluster
CU098481	CU098481	transcribed_cluster
CU108170	CU108170	transcribed_cluster
CU090223	CU090223	transcribed_cluster
CU150627	CU150627	transcribed_cluster
CU141458	CU141458	transcribed_cluster
CU154430	CU154430	transcribed_cluster
CU114444	CU114444	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33670	FAMILY NOT NAMED	coord: 7..202 score: 2.1
None	No IPR available	PANTHER	PTHR33670:SF2	SUBFAMILY NOT NAMED	coord: 7..202 score: 2.1
None	No IPR available	PFAM	PF15365	PNRC	coord: 152..201 score: 8.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G345930	Cla022411	Watermelon (97103) v1	cuwmB112
Csa2G345930	MELO3C011356	Melon (DHL92) v3.5.1	cumeB116
Csa2G345930	ClCG08G014190	Watermelon (Charleston Gray)	cuwcgB170
Csa2G345930	Lsi08G013070	Bottle gourd (USVL1VR-Ls)	culsiB143
Csa2G345930	MELO3C011356.2	Melon (DHL92) v3.6.1	cumedB113
Csa2G345930	Cla97C08G157740	Watermelon (97103) v2	cuwmbB164
Csa2G345930	Bhi04G000107	Wax gourd	cuwgoB166
Csa2G345930	CSPI02G16680	Wild cucumber (PI 183967)	cpicuB065
Csa2G345930	CmoCh12G003510	Cucurbita moschata (Rifu)	cmocuB162
Csa2G345930	CmoCh05G003190	Cucurbita moschata (Rifu)	cmocuB780
Csa2G345930	Cp4.1LG07g03520	Cucurbita pepo (Zucchini)	cpecuB824
Csa2G345930	Cp4.1LG11g02570	Cucurbita pepo (Zucchini)	cpecuB099
Csa2G345930	Carg09396	Silver-seed gourd	carcuB0153
Csa2G345930	Carg03984	Silver-seed gourd	carcuB0991

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G345930	Cucumber (Gy14) v2	cgybcuB057
Csa2G345930	Cucumber (Gy14) v1	cgycuB549