Cp4.1LG11g02570 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG11g02570
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPlant/F10N7-170 protein, putative
LocationCp4.1LG11 : 1431203 .. 1431796 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCAGTTTTGATTCCATTTTCTGCTGAGAGATCTCGCAGTTTAAAGTCCTGTAATTTCTCTCCAGCCACCGTCCACGACGGTCTTCTCAACGTCCCTCCGCCGGCCGTCCCAAATTATAGTCACCGCCACCACCAGCAACCGCCTCTTCTCCCTCTGCCCCGCCGTCCGTTTCCCCCTACGGCAGTCGGGGCCCCGCCGTCGTGCCGCCCAAAGGGTACGAAATCCAGAGATCAATCTCTTACCCCAAAGAAATCAAAACCAATTAAACGAAGTAGAGGGCCTCCGGCGTTGAAATCGACGGCGGAGTTTATGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTACCTAAAGATTTATGGAGAGTTTTAGGATTACGGTCGTCGGCGCCACCGAGAGAAGGTGGCCGGAGTTTTGAGACAGAATTTTCGGGGTCAGGGTTCGGCGTTTCGCCGCCACCGAGTAGCGTTCCGCTTCCGAAATTTAATCTCAGGCGGGAGGTGAGTTGTAATGTGGAGGCCGCCGGAGTGGATGCCGGAGCAACCGACAACCTCAGGCGATTATTGCGCCTCCGATGA

mRNA sequence

ATGGAGGCAGTTTTGATTCCATTTTCTGCTGAGAGATCTCGCAGTTTAAAGTCCTGTAATTTCTCTCCAGCCACCGTCCACGACGGTCTTCTCAACGTCCCTCCGCCGGCCGTCCCAAATTATAGTCACCGCCACCACCAGCAACCGCCTCTTCTCCCTCTGCCCCGCCGTCCGTTTCCCCCTACGGCAGTCGGGGCCCCGCCGTCGTGCCGCCCAAAGGGTACGAAATCCAGAGATCAATCTCTTACCCCAAAGAAATCAAAACCAATTAAACGAAGTAGAGGGCCTCCGGCGTTGAAATCGACGGCGGAGTTTATGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTACCTAAAGATTTATGGAGAGTTTTAGGATTACGGTCGTCGGCGCCACCGAGAGAAGGTGGCCGGAGTTTTGAGACAGAATTTTCGGGGTCAGGGTTCGGCGTTTCGCCGCCACCGAGTAGCGTTCCGCTTCCGAAATTTAATCTCAGGCGGGAGGTGAGTTGTAATGTGGAGGCCGCCGGAGTGGATGCCGGAGCAACCGACAACCTCAGGCGATTATTGCGCCTCCGATGA

Coding sequence (CDS)

ATGGAGGCAGTTTTGATTCCATTTTCTGCTGAGAGATCTCGCAGTTTAAAGTCCTGTAATTTCTCTCCAGCCACCGTCCACGACGGTCTTCTCAACGTCCCTCCGCCGGCCGTCCCAAATTATAGTCACCGCCACCACCAGCAACCGCCTCTTCTCCCTCTGCCCCGCCGTCCGTTTCCCCCTACGGCAGTCGGGGCCCCGCCGTCGTGCCGCCCAAAGGGTACGAAATCCAGAGATCAATCTCTTACCCCAAAGAAATCAAAACCAATTAAACGAAGTAGAGGGCCTCCGGCGTTGAAATCGACGGCGGAGTTTATGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCACGTACCTAAAGATTTATGGAGAGTTTTAGGATTACGGTCGTCGGCGCCACCGAGAGAAGGTGGCCGGAGTTTTGAGACAGAATTTTCGGGGTCAGGGTTCGGCGTTTCGCCGCCACCGAGTAGCGTTCCGCTTCCGAAATTTAATCTCAGGCGGGAGGTGAGTTGTAATGTGGAGGCCGCCGGAGTGGATGCCGGAGCAACCGACAACCTCAGGCGATTATTGCGCCTCCGATGA

Protein sequence

MEAVLIPFSAERSRSLKSCNFSPATVHDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFPPTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRSFETEFSGSGFGVSPPPSSVPLPKFNLRREVSCNVEAAGVDAGATDNLRRLLRLR
Homology
[Close]
BLAST of Cp4.1LG11g02570 vs. TrEMBL
Match: A0A0A0LN70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.3e-68
Identity = 142/202 (70.30%), Postives = 156/202 (77.23%), Query Frame = 1 

Query: 1   MEAVLIPFSAERSRSLKSCNFSPATVHDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFP 60
           ME V IPFSA++SR     NFSPA VH G LN P P +   S R HQQPPLLPLPRRP P
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120
           P+ +GA  S RPK  + RDQSLTPKKSKPIKRSRGPPA KST E +IVDSTNRLGPEPSH
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPREGGRSFET----EFSGSGFGVSPPPSSVPLPKFNLRRE-VSC 180
           VPKDL  +LGLR S P  E  RS+ET    EFSGS +  SPPPSSVPLPKF+LRR+ V C
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 198
           NVEA+GVDAGATDNLRRLLR+R
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]
BLAST of Cp4.1LG11g02570 vs. TrEMBL
Match: F6H1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.6e-35
Identity = 111/231 (48.05%), Postives = 133/231 (57.58%), Query Frame = 1 

Query: 1   MEAVLIPFSAERSRS-----------------LKSCNFSPA-TVHDGLLNVPPPAVPNYS 60
           MEAVL+P S ++S S                   S N SP+  +H GLL  PPP++ +  
Sbjct: 1   MEAVLVPSSPKQSISPYRQIRNPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSSSF 60

Query: 61  HR---------HHQQPPLLPLPRRPFPPTAVGAPPSCRP--KGTKSRDQSLTPKKSKPIK 120
           H          HHQQPPLLPLP    P T    PP   P  K TK RDQSLTPKKSKP  
Sbjct: 61  HSSALLFDHHPHHQQPPLLPLP---VPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSS 120

Query: 121 RSRGPPALKSTA---EFMIVDSTNRLGPEPSHVPKD-LWRVLGLRSSAPPREGGRSFET- 180
           RS      KSTA     ++  STNRLGP+P  +PKD + R+L          G    E  
Sbjct: 121 RSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPKDAVSRIL--------TSGNIVIEDL 180

Query: 181 -EFSGSGFGVSPPPSSVPLPKFNLRREVSCNVEAAGVDAGATDNLRRLLRL 197
            +FSGS F +SPPPSS+PLPKF+LR ++SCN EAAG+DAGAT+NLRRLLRL
Sbjct: 181 DKFSGSVFTLSPPPSSLPLPKFSLRPKLSCNAEAAGIDAGATNNLRRLLRL 220

[Close]
BLAST of Cp4.1LG11g02570 vs. TrEMBL
Match: M5Y1B3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-29
Identity = 86/174 (49.43%), Postives = 110/174 (63.22%), Query Frame = 1 

Query: 27  HDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFPPTAVGAPPSCRPKGTKSRDQSLTPKK 86
           H  LL +P   VPN    HHQ  P LP   R      +  PP+ R K   +R QSLTPKK
Sbjct: 57  HPPLLPLP---VPNRPPHHHQSLPSLPSRTR-----GLSRPPTTR-KANNARSQSLTPKK 116

Query: 87  --SKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRSF 146
             SKP K+       K  ++ +I+ STNRLGP+P+ +PKD+ +VL   SS+       S 
Sbjct: 117 PKSKPSKKEEA----KQISDCLIIASTNRLGPDPNDLPKDVTKVLMTSSSSSSSSSSSSI 176

Query: 147 ETE-FSGSGFGVSPPPSSVPLPKFNLRREVSCNVEAAGVDAGATDNLRRLLRLR 198
           + + FSGS F +SPPPSS+PLP+F+L+R +S N EAAG+DAGATDNLRRLLRLR
Sbjct: 177 DMDKFSGSIFTLSPPPSSLPLPRFSLQRRLSRNAEAAGIDAGATDNLRRLLRLR 217

[Close]
BLAST of Cp4.1LG11g02570 vs. TrEMBL
Match: A0A067H1W0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.8e-26
Identity = 87/174 (50.00%), Postives = 106/174 (60.92%), Query Frame = 1 

Query: 34  PPPAVPNYSHRHHQQPPLLPLPRRPFPPTAVGAPPSCRPKGTKSRDQSLTPKKS---KPI 93
           PP ++ NY  +  Q PPLLPLP     P+    P     K  ++RDQSLTPKKS   +P 
Sbjct: 54  PPLSLDNYHQQQQQPPPLLPLPIHNPLPSRSRYP--INRKSNRTRDQSLTPKKSNSKRPN 113

Query: 94  KRSRGP------PALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRSF 153
           KR          P  K+ +E  IV S N  GP+P+ +PKD+ +VL     A      +  
Sbjct: 114 KREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDVSKVLSAGIVAV-----KDL 173

Query: 154 ETEFSGSGFGVSPPPSSVPLPKFNLR-REVSCNVEAAGVDAGATDNLRRLLRLR 198
           E +FSGS F VSPPPSS+PLPKF LR + +SCN EAAGVDAGATDNLRRLLRLR
Sbjct: 174 E-KFSGSLFTVSPPPSSLPLPKFALRPKPISCNAEAAGVDAGATDNLRRLLRLR 219

[Close]
BLAST of Cp4.1LG11g02570 vs. TrEMBL
Match: V4SL18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.1e-26
Identity = 87/174 (50.00%), Postives = 106/174 (60.92%), Query Frame = 1 

Query: 34  PPPAVPNYSHRHHQQPPLLPLPRRPFPPTAVGAPPSCRPKGTKSRDQSLTPKKS---KPI 93
           PP ++ NY  +  Q PPLLPLP     P+    P     K  ++RDQSLTPKKS   +P 
Sbjct: 54  PPLSLDNYHQQQQQPPPLLPLPIHNPLPSRSRYP--INRKSNRTRDQSLTPKKSNSKRPN 113

Query: 94  KRSRGP------PALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRSF 153
           KR          P  K+ +E  IV S N  GP+P+ +PKD+ +VL     A      +  
Sbjct: 114 KREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDVSKVLSAGIVAV-----KDL 173

Query: 154 ETEFSGSGFGVSPPPSSVPLPKFNLRRE-VSCNVEAAGVDAGATDNLRRLLRLR 198
           E +FSGS F VSPPPSS+PLPKF LR + +SCN EAAGVDAGATDNLRRLLRLR
Sbjct: 174 E-KFSGSLFTVSPPPSSLPLPKFALRPKLISCNAEAAGVDAGATDNLRRLLRLR 219

[Close]
BLAST of Cp4.1LG11g02570 vs. TAIR10
Match: AT1G20070.1 (AT1G20070.1 unknown protein)

HSP 1 Score: 55.5 bits (132), Expect = 4.4e-08
Identity = 49/160 (30.63%), Postives = 75/160 (46.88%), Query Frame = 1 

Query: 39  PNYSHRH-HQQPPLLPLPRRPFPPTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPP 98
           P Y   H + QPPLLPLPR       +    S RP+   +   +   + +K I  +    
Sbjct: 53  PAYPPPHSYSQPPLLPLPRVNSSTVPLQRVNSSRPRVNNNSSLNRVAQ-TKAISETH--- 112

Query: 99  ALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRSFETEFSGSGFGVSP 158
                AEF+      R G  P    +              R+    F+     +   +SP
Sbjct: 113 --MKKAEFIESARLTRTGSVPIQANQ-------------LRDFPEGFDGYPGPAIMLLSP 172

Query: 159 PPSSVPLPKFNLRREVSCNVEAAGVDAGATDNLRRLLRLR 198
           PPSS+P+P+F+++ ++ CNVEAAG    AT+N+RR+L+LR
Sbjct: 173 PPSSLPMPRFSIKPKLRCNVEAAGKSDVATNNIRRVLQLR 193

[Close]
BLAST of Cp4.1LG11g02570 vs. NCBI nr
Match: gi|700207133|gb|KGN62252.1| (hypothetical protein Csa_2G345930 [Cucumis sativus])

HSP 1 Score: 266.2 bits (679), Expect = 4.7e-68
Identity = 142/202 (70.30%), Postives = 156/202 (77.23%), Query Frame = 1 

Query: 1   MEAVLIPFSAERSRSLKSCNFSPATVHDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFP 60
           ME V IPFSA++SR     NFSPA VH G LN P P +   S R HQQPPLLPLPRRP P
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCRQHQQPPLLPLPRRPLP 60

Query: 61  PTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSH 120
           P+ +GA  S RPK  + RDQSLTPKKSKPIKRSRGPPA KST E +IVDSTNRLGPEPSH
Sbjct: 61  PSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSH 120

Query: 121 VPKDLWRVLGLRSSAPPREGGRSFET----EFSGSGFGVSPPPSSVPLPKFNLRRE-VSC 180
           VPKDL  +LGLR S P  E  RS+ET    EFSGS +  SPPPSSVPLPKF+LRR+ V C
Sbjct: 121 VPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGC 180

Query: 181 NVEAAGVDAGATDNLRRLLRLR 198
           NVEA+GVDAGATDNLRRLLR+R
Sbjct: 181 NVEASGVDAGATDNLRRLLRIR 202

[Close]
BLAST of Cp4.1LG11g02570 vs. NCBI nr
Match: gi|359492270|ref|XP_003634392.1| (PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera])

HSP 1 Score: 156.4 bits (394), Expect = 5.2e-35
Identity = 111/231 (48.05%), Postives = 133/231 (57.58%), Query Frame = 1 

Query: 1   MEAVLIPFSAERSRS-----------------LKSCNFSPA-TVHDGLLNVPPPAVPNYS 60
           MEAVL+P S ++S S                   S N SP+  +H GLL  PPP++ +  
Sbjct: 1   MEAVLVPSSPKQSISPYRQIRNPKRNNRRFISKPSENLSPSRNIHGGLLLAPPPSLSSSF 60

Query: 61  HR---------HHQQPPLLPLPRRPFPPTAVGAPPSCRP--KGTKSRDQSLTPKKSKPIK 120
           H          HHQQPPLLPLP    P T    PP   P  K TK RDQSLTPKKSKP  
Sbjct: 61  HSSALLFDHHPHHQQPPLLPLP---VPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSS 120

Query: 121 RSRGPPALKSTA---EFMIVDSTNRLGPEPSHVPKD-LWRVLGLRSSAPPREGGRSFET- 180
           RS      KSTA     ++  STNRLGP+P  +PKD + R+L          G    E  
Sbjct: 121 RSPKKEDSKSTAISDGSVMAASTNRLGPDPKDLPKDAVSRIL--------TSGNIVIEDL 180

Query: 181 -EFSGSGFGVSPPPSSVPLPKFNLRREVSCNVEAAGVDAGATDNLRRLLRL 197
            +FSGS F +SPPPSS+PLPKF+LR ++SCN EAAG+DAGAT+NLRRLLRL
Sbjct: 181 DKFSGSVFTLSPPPSSLPLPKFSLRPKLSCNAEAAGIDAGATNNLRRLLRL 220

[Close]
BLAST of Cp4.1LG11g02570 vs. NCBI nr
Match: gi|1009135162|ref|XP_015884838.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 139.4 bits (350), Expect = 6.6e-30
Identity = 93/208 (44.71%), Postives = 123/208 (59.13%), Query Frame = 1 

Query: 15  SLKSCNFSPATVHDGLLNVPPPAV----PNYSHRHHQQPPLLPLP-RRPF---PPTAVGA 74
           S+ S N +P   H GLL+ PPP++    P   H +++QPPLLPLP  RP     P +   
Sbjct: 28  SIPSENLAPINSHGGLLSAPPPSLSYSYPPTHHHYYRQPPLLPLPVSRPHHGHSPPSRSR 87

Query: 75  PPSCRP---KGTKSRDQSL--TPKKSKP------------IKRSRGPPALKSTAEFMIVD 134
             SC P   K  K+RD  +  TPKKSK              K+     ++KS    +IV 
Sbjct: 88  GLSCPPTTGKTNKARDNPIATTPKKSKSKPPCVSKIDQEETKQQLHTKSMKSGTGSLIVT 147

Query: 135 STNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRSFETEFSGSGFGVSPPPSSVPLPKFNL 194
           STNRLGPEP+ +PKD+ +VL   +     EG      +FSGS F ++PPPSS+PLP+F++
Sbjct: 148 STNRLGPEPNDLPKDVSKVLWKSNCCVSIEGDLD---KFSGSVFSLAPPPSSLPLPRFSV 207

Query: 195 RREVSCNVEAAGVDAGATDNLRRLLRLR 198
           R ++SCN EA G+DAGATDNL RLLRLR
Sbjct: 208 RPKLSCNAEATGIDAGATDNLCRLLRLR 232

[Close]
BLAST of Cp4.1LG11g02570 vs. NCBI nr
Match: gi|596294279|ref|XP_007226809.1| (hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica])

HSP 1 Score: 137.5 bits (345), Expect = 2.5e-29
Identity = 86/174 (49.43%), Postives = 110/174 (63.22%), Query Frame = 1 

Query: 27  HDGLLNVPPPAVPNYSHRHHQQPPLLPLPRRPFPPTAVGAPPSCRPKGTKSRDQSLTPKK 86
           H  LL +P   VPN    HHQ  P LP   R      +  PP+ R K   +R QSLTPKK
Sbjct: 57  HPPLLPLP---VPNRPPHHHQSLPSLPSRTR-----GLSRPPTTR-KANNARSQSLTPKK 116

Query: 87  --SKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPSHVPKDLWRVLGLRSSAPPREGGRSF 146
             SKP K+       K  ++ +I+ STNRLGP+P+ +PKD+ +VL   SS+       S 
Sbjct: 117 PKSKPSKKEEA----KQISDCLIIASTNRLGPDPNDLPKDVTKVLMTSSSSSSSSSSSSI 176

Query: 147 ETE-FSGSGFGVSPPPSSVPLPKFNLRREVSCNVEAAGVDAGATDNLRRLLRLR 198
           + + FSGS F +SPPPSS+PLP+F+L+R +S N EAAG+DAGATDNLRRLLRLR
Sbjct: 177 DMDKFSGSIFTLSPPPSSLPLPRFSLQRRLSRNAEAAGIDAGATDNLRRLLRLR 217

[Close]
BLAST of Cp4.1LG11g02570 vs. NCBI nr
Match: gi|694316652|ref|XP_009334864.1| (PREDICTED: uncharacterized protein LOC103927644 [Pyrus x bretschneideri])

HSP 1 Score: 133.3 bits (334), Expect = 4.7e-28
Identity = 90/201 (44.78%), Postives = 114/201 (56.72%), Query Frame = 1 

Query: 27  HDGLLNVPPPAVPNYSH-----------RHHQQPPLLPLPRRPFPP-------------T 86
           H GLL  PPP++  ++H           + HQ PPLLPLP    PP              
Sbjct: 34  HGGLLQAPPPSLSLFNHYRYQHLQQAQRQQHQNPPLLPLPVPNRPPHHHRSLPSLPSRTR 93

Query: 87  AVGAPPSCRPKGTK-SRDQSLTPKK--SKPIKRSRGPPA-LKSTAEFMIVDSTNRLGPEP 146
               PP+ R      +R QSLTPKK  SKP K+        K+ +E +I+ STNRLGP+P
Sbjct: 94  GASRPPAARKTNNMITRSQSLTPKKPKSKPSKKEEANKQDFKAISECLIIASTNRLGPDP 153

Query: 147 SHVPKDLWRVLGLRSSAPPREGGRSFETE-FSGSGFGVSPPPSSVPLPKFNLRREVSCNV 198
           + +PKD+ RVL          GG   + E FSGS F +SPPPSS+PLP+F+L+  + CN 
Sbjct: 154 NDLPKDVTRVLSSSIGKSLGGGGGVGDMEKFSGSIFTLSPPPSSLPLPRFSLQPRLGCNA 213

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g02570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g02570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN70_CUCSA3.3e-6870.30Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1[more]
F6H1M4_VITVI3.6e-3548.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=... [more]
M5Y1B3_PRUPE1.8e-2949.43Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 S... [more]
A0A067H1W0_CITSI1.8e-2650.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1[more]
V4SL18_9ROSI3.1e-2650.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1[more]
BLAST of Cp4.1LG11g02570 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G20070.14.4e-0830.63 unknown protein[more]
BLAST of Cp4.1LG11g02570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207133|gb|KGN62252.1|4.7e-6870.30hypothetical protein Csa_2G345930 [Cucumis sativus][more]
gi|359492270|ref|XP_003634392.1|5.2e-3548.05PREDICTED: uncharacterized protein LOC100249003 [Vitis vinifera][more]
gi|1009135162|ref|XP_015884838.1|6.6e-3044.71PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Zizi... [more]
gi|596294279|ref|XP_007226809.1|2.5e-2949.43hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica][more]
gi|694316652|ref|XP_009334864.1|4.7e-2844.78PREDICTED: uncharacterized protein LOC103927644 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g02570.1Cp4.1LG11g02570.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33670FAMILY NOT NAMEDcoord: 5..197
score: 5.6
NoneNo IPR availablePANTHERPTHR33670:SF2SUBFAMILY NOT NAMEDcoord: 5..197
score: 5.6
NoneNo IPR availablePFAMPF15365PNRCcoord: 147..195
score: 3.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG11g02570CmoCh12G003510Cucurbita moschata (Rifu)cmocpeB154
Cp4.1LG11g02570CmoCh05G003190Cucurbita moschata (Rifu)cmocpeB720
Cp4.1LG11g02570Cla022411Watermelon (97103) v1cpewmB101
Cp4.1LG11g02570Csa2G345930Cucumber (Chinese Long) v2cpecuB099
Cp4.1LG11g02570MELO3C011356Melon (DHL92) v3.5.1cpemeB089
Cp4.1LG11g02570ClCG08G014190Watermelon (Charleston Gray)cpewcgB125
Cp4.1LG11g02570CSPI02G16680Wild cucumber (PI 183967)cpecpiB096
Cp4.1LG11g02570Lsi08G013070Bottle gourd (USVL1VR-Ls)cpelsiB100
Cp4.1LG11g02570MELO3C011356.2Melon (DHL92) v3.6.1cpemedB112
Cp4.1LG11g02570CsaV3_2G024250Cucumber (Chinese Long) v3cpecucB0109
Cp4.1LG11g02570Bhi04G000107Wax gourdcpewgoB0142
Cp4.1LG11g02570Carg09396Silver-seed gourdcarcpeB0199
Cp4.1LG11g02570Carg03984Silver-seed gourdcarcpeB1352
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG11g02570Cp4.1LG07g03520Cucurbita pepo (Zucchini)cpecpeB146
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG11g02570Cucumber (Chinese Long) v3cpecucB0113
Cp4.1LG11g02570Cucumber (Chinese Long) v3cpecucB0133
Cp4.1LG11g02570Wax gourdcpewgoB0153
Cp4.1LG11g02570Cucurbita pepo (Zucchini)cpecpeB061
Cp4.1LG11g02570Cucurbita pepo (Zucchini)cpecpeB110
Cp4.1LG11g02570Cucurbita pepo (Zucchini)cpecpeB112
Cp4.1LG11g02570Cucurbita maxima (Rimu)cmacpeB179
Cp4.1LG11g02570Cucurbita maxima (Rimu)cmacpeB766
Cp4.1LG11g02570Wild cucumber (PI 183967)cpecpiB124
Cp4.1LG11g02570Watermelon (Charleston Gray)cpewcgB106
Cp4.1LG11g02570Watermelon (97103) v1cpewmB115
Cp4.1LG11g02570Cucumber (Gy14) v2cgybcpeB716
Cp4.1LG11g02570Cucumber (Gy14) v2cgybcpeB897