Cp4.1LG07g03520 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g03520
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBnaC05g15590D protein
LocationCp4.1LG07 : 2293985 .. 2294554 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCGGTTTTGATTCCCCATAATTTCTCTCCGGCCGCCCCGGCTGTCACATTTTATAGCCATCGCCGTCGCCATCGTCGTCGCCACCGCCGGCAGCCGCCTCGCTTCCCTTTTCCCCGTCGTTCATTTCCCCCTTCAGCGGCGGAATCCCAGCCGTCGTGCCGCCCAAAGGGTGTGAGATTCAGAGACCAATCTCTTGCCCCAAAGAAACCAAAATCAATTAAACGATGCAGAGAGCTGCCGGTTGAAATGACGGCGGAGGCTTTGATCGTTGATTCCACGAATCGAATGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGGTCGTTTTAGGATTACGTTTGCCGCCGCCGCTTCCGCCGCCGTGGGAAGGTAGCAGGAGTTTGGGGGTGGCGGCAGAGATTGAGTTTTCTGGTTCGGCGTTTAACGTTTCGCCGCCGCCGAGTAGCGTGCCGCTTCCGAATTTCTCTCTGATGCGGAAGCTGAATTGTAATGTAGAGGCCGCTGCCGGAATTGACGCCGGAGCCACCGACAATCTCCGGCGACTTCTACGCCTCCGATGA

mRNA sequence

ATGGAGGCGGTTTTGATTCCCCATAATTTCTCTCCGGCCGCCCCGGCTGTCACATTTTATAGCCATCGCCGTCGCCATCGTCGTCGCCACCGCCGGCAGCCGCCTCGCTTCCCTTTTCCCCGTCGTTCATTTCCCCCTTCAGCGGCGGAATCCCAGCCGTCGTGCCGCCCAAAGGGTGTGAGATTCAGAGACCAATCTCTTGCCCCAAAGAAACCAAAATCAATTAAACGATGCAGAGAGCTGCCGGTTGAAATGACGGCGGAGGCTTTGATCGTTGATTCCACGAATCGAATGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGGTCGTTTTAGGATTACGTTTGCCGCCGCCGCTTCCGCCGCCGTGGGAAGGTAGCAGGAGTTTGGGGGTGGCGGCAGAGATTGAGTTTTCTGGTTCGGCGTTTAACGTTTCGCCGCCGCCGAGTAGCGTGCCGCTTCCGAATTTCTCTCTGATGCGGAAGCTGAATTGTAATGTAGAGGCCGCTGCCGGAATTGACGCCGGAGCCACCGACAATCTCCGGCGACTTCTACGCCTCCGATGA

Coding sequence (CDS)

ATGGAGGCGGTTTTGATTCCCCATAATTTCTCTCCGGCCGCCCCGGCTGTCACATTTTATAGCCATCGCCGTCGCCATCGTCGTCGCCACCGCCGGCAGCCGCCTCGCTTCCCTTTTCCCCGTCGTTCATTTCCCCCTTCAGCGGCGGAATCCCAGCCGTCGTGCCGCCCAAAGGGTGTGAGATTCAGAGACCAATCTCTTGCCCCAAAGAAACCAAAATCAATTAAACGATGCAGAGAGCTGCCGGTTGAAATGACGGCGGAGGCTTTGATCGTTGATTCCACGAATCGAATGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGGTCGTTTTAGGATTACGTTTGCCGCCGCCGCTTCCGCCGCCGTGGGAAGGTAGCAGGAGTTTGGGGGTGGCGGCAGAGATTGAGTTTTCTGGTTCGGCGTTTAACGTTTCGCCGCCGCCGAGTAGCGTGCCGCTTCCGAATTTCTCTCTGATGCGGAAGCTGAATTGTAATGTAGAGGCCGCTGCCGGAATTGACGCCGGAGCCACCGACAATCTCCGGCGACTTCTACGCCTCCGATGA

Protein sequence

MEAVLIPHNFSPAAPAVTFYSHRRRHRRRHRRQPPRFPFPRRSFPPSAAESQPSCRPKGVRFRDQSLAPKKPKSIKRCRELPVEMTAEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPPPLPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFSLMRKLNCNVEAAAGIDAGATDNLRRLLRLR
Homology
[Close]
BLAST of Cp4.1LG07g03520 vs. TrEMBL
Match: A0A0A0LN70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-43
Identity = 112/195 (57.44%), Postives = 130/195 (66.67%), Query Frame = 1 

Query: 7   PHNFSPA----------APAVTFYSHRRRHRRRHRRQPPRFPFPRRSFPPSAAESQPSCR 66
           P NFSPA           P +++ S R+       +QPP  P PRR  PPS   +  S R
Sbjct: 18  PQNFSPANVHGGFLNFPLPGISYNSCRQH------QQPPLLPLPRRPLPPSEIGATVSSR 77

Query: 67  PKGVRFRDQSLAPKKPKSIKRCRELPV-EMTAEALIVDSTNRMGPEPSHVPKDLWVVLGL 126
           PK + FRDQSL PKK K IKR R  P  + T E +IVDSTNR+GPEPSHVPKDL  +LGL
Sbjct: 78  PKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSHVPKDLLTLLGL 137

Query: 127 RLPPPLPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFSLMRK-LNCNVEAAAGI 186
           R   P  P  E +RS   AAEIEFSGSA++ SPPPSSVPLP FSL RK + CNVE A+G+
Sbjct: 138 R---PSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGCNVE-ASGV 197

Query: 187 DAGATDNLRRLLRLR 190
           DAGATDNLRRLLR+R
Sbjct: 198 DAGATDNLRRLLRIR 202

[Close]
BLAST of Cp4.1LG07g03520 vs. TrEMBL
Match: M5Y1B3_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.2e-24
Identity = 85/196 (43.37%), Postives = 117/196 (59.69%), Query Frame = 1 

Query: 9   NFSPAAPAVTFYSHRR-RHRRRHRRQ-PPRFPFPRRSFPPSAAESQPSC--------RPK 68
           +++P A     Y +++ +H +R ++Q PP  P P  + PP   +S PS         RP 
Sbjct: 31  SYNPPASLYNQYRYQQLQHVQRQQQQHPPLLPLPVPNRPPHHHQSLPSLPSRTRGLSRPP 90

Query: 69  GVR----FRDQSLAPKKPKSIKRCRELPVEMTAEALIVDSTNRMGPEPSHVPKDLWVVLG 128
             R     R QSL PKKPKS K  ++   +  ++ LI+ STNR+GP+P+ +PKD+  VL 
Sbjct: 91  TTRKANNARSQSLTPKKPKS-KPSKKEEAKQISDCLIIASTNRLGPDPNDLPKDVTKVL- 150

Query: 129 LRLPPPLPPPWEGSRSLGVAAEIE-FSGSAFNVSPPPSSVPLPNFSLMRKLNCNVEAAAG 188
                 +      S S   + +++ FSGS F +SPPPSS+PLP FSL R+L+ N E AAG
Sbjct: 151 ------MTSSSSSSSSSSSSIDMDKFSGSIFTLSPPPSSLPLPRFSLQRRLSRNAE-AAG 210

Query: 189 IDAGATDNLRRLLRLR 190
           IDAGATDNLRRLLRLR
Sbjct: 211 IDAGATDNLRRLLRLR 217

[Close]
BLAST of Cp4.1LG07g03520 vs. TrEMBL
Match: F6H1M4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.4e-20
Identity = 72/165 (43.64%), Postives = 93/165 (56.36%), Query Frame = 1 

Query: 30  HRRQPPRFPFPRRSFPPSAAESQPSCRP--KGVRFRDQSLAPKKPK----SIKRCRELPV 89
           H +QPP  P P    P + A   P   P  K  + RDQSL PKK K    S K+      
Sbjct: 72  HHQQPPLLPLP---VPKTYASLPPRSPPLNKKTKIRDQSLTPKKSKPSSRSPKKEDSKST 131

Query: 90  EMTAEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPPPLPPPWEGSRSLGVAAEIEFSGSA 149
            ++  +++  STNR+GP+P  +PKD    +              S ++ +    +FSGS 
Sbjct: 132 AISDGSVMAASTNRLGPDPKDLPKDAVSRILT------------SGNIVIEDLDKFSGSV 191

Query: 150 FNVSPPPSSVPLPNFSLMRKLNCNVEAAAGIDAGATDNLRRLLRL 189
           F +SPPPSS+PLP FSL  KL+CN E AAGIDAGAT+NLRRLLRL
Sbjct: 192 FTLSPPPSSLPLPKFSLRPKLSCNAE-AAGIDAGATNNLRRLLRL 220

[Close]
BLAST of Cp4.1LG07g03520 vs. TrEMBL
Match: V4SL18_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.2e-20
Identity = 80/192 (41.67%), Postives = 106/192 (55.21%), Query Frame = 1 

Query: 14  APAVTFYSHRR----RHRRRHRRQPPRFPFPRRSFPPSAAESQPSCRPKGVRFRDQSLAP 73
           AP +T YS+       + ++ ++ PP  P P  +  P  + S+     K  R RDQSL P
Sbjct: 45  APPLTTYSYPPLSLDNYHQQQQQPPPLLPLPIHN--PLPSRSRYPINRKSNRTRDQSLTP 104

Query: 74  KKPKSIKRCRE---------LPVEMT-AEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPP 133
           KK  S +  +           P+E T +E+ IV S N  GP+P+ +PKD+  VL      
Sbjct: 105 KKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDVSKVL------ 164

Query: 134 PLPPPWEGSRSLGVAAEIE-FSGSAFNVSPPPSSVPLPNFSLMRKL-NCNVEAAAGIDAG 190
                   S  +    ++E FSGS F VSPPPSS+PLP F+L  KL +CN E AAG+DAG
Sbjct: 165 --------SAGIVAVKDLEKFSGSLFTVSPPPSSLPLPKFALRPKLISCNAE-AAGVDAG 219

[Close]
BLAST of Cp4.1LG07g03520 vs. TrEMBL
Match: A0A067H1W0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-19
Identity = 79/192 (41.15%), Postives = 106/192 (55.21%), Query Frame = 1 

Query: 14  APAVTFYSHRR----RHRRRHRRQPPRFPFPRRSFPPSAAESQPSCRPKGVRFRDQSLAP 73
           AP +T YS+       + ++ ++ PP  P P  +  P  + S+     K  R RDQSL P
Sbjct: 45  APPLTTYSYPPLSLDNYHQQQQQPPPLLPLPIHN--PLPSRSRYPINRKSNRTRDQSLTP 104

Query: 74  KKPKSIKRCRE---------LPVEMT-AEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPP 133
           KK  S +  +           P+E T +E+ IV S N  GP+P+ +PKD+  VL      
Sbjct: 105 KKSNSKRPNKREDESKIELLKPIEKTISESFIVTSVNPSGPDPNDLPKDVSKVL------ 164

Query: 134 PLPPPWEGSRSLGVAAEIE-FSGSAFNVSPPPSSVPLPNFSLMRK-LNCNVEAAAGIDAG 190
                   S  +    ++E FSGS F VSPPPSS+PLP F+L  K ++CN E AAG+DAG
Sbjct: 165 --------SAGIVAVKDLEKFSGSLFTVSPPPSSLPLPKFALRPKPISCNAE-AAGVDAG 219

[Close]
BLAST of Cp4.1LG07g03520 vs. TAIR10
Match: AT1G20070.1 (AT1G20070.1 unknown protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-08
Identity = 27/44 (61.36%), Postives = 35/44 (79.55%), Query Frame = 1 

Query: 146 VSPPPSSVPLPNFSLMRKLNCNVEAAAGIDAGATDNLRRLLRLR 190
           +SPPPSS+P+P FS+  KL CNVEAA   D  AT+N+RR+L+LR
Sbjct: 151 LSPPPSSLPMPRFSIKPKLRCNVEAAGKSDV-ATNNIRRVLQLR 193

[Close]
BLAST of Cp4.1LG07g03520 vs. NCBI nr
Match: gi|700207133|gb|KGN62252.1| (hypothetical protein Csa_2G345930 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-43
Identity = 112/195 (57.44%), Postives = 130/195 (66.67%), Query Frame = 1 

Query: 7   PHNFSPA----------APAVTFYSHRRRHRRRHRRQPPRFPFPRRSFPPSAAESQPSCR 66
           P NFSPA           P +++ S R+       +QPP  P PRR  PPS   +  S R
Sbjct: 18  PQNFSPANVHGGFLNFPLPGISYNSCRQH------QQPPLLPLPRRPLPPSEIGATVSSR 77

Query: 67  PKGVRFRDQSLAPKKPKSIKRCRELPV-EMTAEALIVDSTNRMGPEPSHVPKDLWVVLGL 126
           PK + FRDQSL PKK K IKR R  P  + T E +IVDSTNR+GPEPSHVPKDL  +LGL
Sbjct: 78  PKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPSHVPKDLLTLLGL 137

Query: 127 RLPPPLPPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFSLMRK-LNCNVEAAAGI 186
           R   P  P  E +RS   AAEIEFSGSA++ SPPPSSVPLP FSL RK + CNVE A+G+
Sbjct: 138 R---PSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVGCNVE-ASGV 197

Query: 187 DAGATDNLRRLLRLR 190
           DAGATDNLRRLLR+R
Sbjct: 198 DAGATDNLRRLLRIR 202

[Close]
BLAST of Cp4.1LG07g03520 vs. NCBI nr
Match: gi|694316652|ref|XP_009334864.1| (PREDICTED: uncharacterized protein LOC103927644 [Pyrus x bretschneideri])

HSP 1 Score: 124.0 bits (310), Expect = 2.8e-25
Identity = 84/188 (44.68%), Postives = 104/188 (55.32%), Query Frame = 1 

Query: 20  YSHRRRHRRRHRRQPPRFPFPRRSFPPSAAESQPSC--------RPKGVR------FRDQ 79
           Y H ++ +R+  + PP  P P  + PP    S PS         RP   R       R Q
Sbjct: 53  YQHLQQAQRQQHQNPPLLPLPVPNRPPHHHRSLPSLPSRTRGASRPPAARKTNNMITRSQ 112

Query: 80  SLAPKKPKSIKRCRE----LPVEMTAEALIVDSTNRMGPEPSHVPKDLWVVLGLRLPPPL 139
           SL PKKPKS    +E       +  +E LI+ STNR+GP+P+ +PKD+  VL   +   L
Sbjct: 113 SLTPKKPKSKPSKKEEANKQDFKAISECLIIASTNRLGPDPNDLPKDVTRVLSSSIGKSL 172

Query: 140 PPPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFSLMRKLNCNVEAAAGIDAGATDN 190
                     GV    +FSGS F +SPPPSS+PLP FSL  +L CN EAAAGIDAGATDN
Sbjct: 173 ------GGGGGVGDMEKFSGSIFTLSPPPSSLPLPRFSLQPRLGCNAEAAAGIDAGATDN 232

[Close]
BLAST of Cp4.1LG07g03520 vs. NCBI nr
Match: gi|596294279|ref|XP_007226809.1| (hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica])

HSP 1 Score: 119.0 bits (297), Expect = 8.9e-24
Identity = 85/196 (43.37%), Postives = 117/196 (59.69%), Query Frame = 1 

Query: 9   NFSPAAPAVTFYSHRR-RHRRRHRRQ-PPRFPFPRRSFPPSAAESQPSC--------RPK 68
           +++P A     Y +++ +H +R ++Q PP  P P  + PP   +S PS         RP 
Sbjct: 31  SYNPPASLYNQYRYQQLQHVQRQQQQHPPLLPLPVPNRPPHHHQSLPSLPSRTRGLSRPP 90

Query: 69  GVR----FRDQSLAPKKPKSIKRCRELPVEMTAEALIVDSTNRMGPEPSHVPKDLWVVLG 128
             R     R QSL PKKPKS K  ++   +  ++ LI+ STNR+GP+P+ +PKD+  VL 
Sbjct: 91  TTRKANNARSQSLTPKKPKS-KPSKKEEAKQISDCLIIASTNRLGPDPNDLPKDVTKVL- 150

Query: 129 LRLPPPLPPPWEGSRSLGVAAEIE-FSGSAFNVSPPPSSVPLPNFSLMRKLNCNVEAAAG 188
                 +      S S   + +++ FSGS F +SPPPSS+PLP FSL R+L+ N E AAG
Sbjct: 151 ------MTSSSSSSSSSSSSIDMDKFSGSIFTLSPPPSSLPLPRFSLQRRLSRNAE-AAG 210

Query: 189 IDAGATDNLRRLLRLR 190
           IDAGATDNLRRLLRLR
Sbjct: 211 IDAGATDNLRRLLRLR 217

[Close]
BLAST of Cp4.1LG07g03520 vs. NCBI nr
Match: gi|657991400|ref|XP_008387926.1| (PREDICTED: uncharacterized protein LOC103450369 [Malus domestica])

HSP 1 Score: 116.3 bits (290), Expect = 5.8e-23
Identity = 79/187 (42.25%), Postives = 103/187 (55.08%), Query Frame = 1 

Query: 20  YSHRRRHRRRHRRQPPRFPFPRRSFPPSAAESQPSC--------RPKGVR------FRDQ 79
           Y H ++ +R+  + PP  P P  + PP   +S PS         RP   R       R Q
Sbjct: 53  YQHLQQAQRQQHQNPPLLPLPVPNRPPYHHQSLPSLPSRTRSASRPPAARKTNNMITRSQ 112

Query: 80  SLAPKKPKSIKRCRELPVEMTAEAL---IVDSTNRMGPEPSHVPKDLWVVLGLRLPPPLP 139
           SL PKKPKS    +E   +   +A+   ++ STNR+GP+P+ +P D+  V    +   L 
Sbjct: 113 SLTPKKPKSKPSKKEEANKQDFKAISECLIASTNRLGPDPNDLPIDVTRVFSSSIGKSL- 172

Query: 140 PPWEGSRSLGVAAEIEFSGSAFNVSPPPSSVPLPNFSLMRKLNCNVEAAAGIDAGATDNL 190
                    GV    +FSGS F +SPPPSS+PLP FSL  +L CN EAAAG+DAGATDNL
Sbjct: 173 -----GGGGGVGDMEKFSGSIFTLSPPPSSLPLPRFSLQPRLGCNAEAAAGVDAGATDNL 232

[Close]
BLAST of Cp4.1LG07g03520 vs. NCBI nr
Match: gi|645228963|ref|XP_008221238.1| (PREDICTED: IQ motif and SEC7 domain-containing protein 3 [Prunus mume])

HSP 1 Score: 115.9 bits (289), Expect = 7.5e-23
Identity = 86/207 (41.55%), Postives = 113/207 (54.59%), Query Frame = 1 

Query: 9   NFSPAAPAVTFYSHRRRH----RRRHRRQPPRFPFPRRSFPPSAAESQPSC--------R 68
           +FS   PA  +  +R +     +R+ ++ PP  P P  + PP   +S PS         R
Sbjct: 50  SFSYNPPASLYNKYRYQQLQQVQRQQQQHPPLLPLPVPNRPPHHHQSLPSLPSRTRGLSR 109

Query: 69  PKGVR----FRDQSLAPKKPKSIKRCRELPVEMTAEALIVDSTNRMGPEPSHVPKDLWVV 128
           P   R     R QSL PKKPKS K  ++   +  ++ LI+ STNR+GP+P+ +PKD+  V
Sbjct: 110 PPPTRKANNARSQSLTPKKPKS-KPSKKEEAKQISDCLIIASTNRLGPDPNDLPKDVTKV 169

Query: 129 LGLRLPPPLPPPWEGSR----------SLGVAAEIEFSGSAFNVSPPPSSVPLPNFSLMR 188
           L              S            +GV    +FSGS F +SPPPSS+PLP FSL R
Sbjct: 170 LMTSSSSSSSSSSSSSSIGNMRDLSGGGVGVGDMDKFSGSIFTLSPPPSSLPLPRFSLQR 229

Query: 189 KLNCNVEAAAGIDAGATDNLRRLLRLR 190
           +L+ N E AAGIDAGATDNLRRLLRLR
Sbjct: 230 RLSRNAE-AAGIDAGATDNLRRLLRLR 254

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g03520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG07g03520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LN70_CUCSA1.2e-4357.44Uncharacterized protein OS=Cucumis sativus GN=Csa_2G345930 PE=4 SV=1[more]
M5Y1B3_PRUPE6.2e-2443.37Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024785mg PE=4 S... [more]
F6H1M4_VITVI5.4e-2043.64Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g14640 PE=4 SV=... [more]
V4SL18_9ROSI9.2e-2041.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002425mg PE=4 SV=1[more]
A0A067H1W0_CITSI1.6e-1941.15Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039600mg PE=4 SV=1[more]
BLAST of Cp4.1LG07g03520 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G20070.12.5e-0861.36 unknown protein[more]
BLAST of Cp4.1LG07g03520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207133|gb|KGN62252.1|1.7e-4357.44hypothetical protein Csa_2G345930 [Cucumis sativus][more]
gi|694316652|ref|XP_009334864.1|2.8e-2544.68PREDICTED: uncharacterized protein LOC103927644 [Pyrus x bretschneideri][more]
gi|596294279|ref|XP_007226809.1|8.9e-2443.37hypothetical protein PRUPE_ppa024785mg, partial [Prunus persica][more]
gi|657991400|ref|XP_008387926.1|5.8e-2342.25PREDICTED: uncharacterized protein LOC103450369 [Malus domestica][more]
gi|645228963|ref|XP_008221238.1|7.5e-2341.55PREDICTED: IQ motif and SEC7 domain-containing protein 3 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g03520.1Cp4.1LG07g03520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33670FAMILY NOT NAMEDcoord: 126..189
score: 1.5E-32coord: 10..108
score: 1.5
NoneNo IPR availablePANTHERPTHR33670:SF2SUBFAMILY NOT NAMEDcoord: 126..189
score: 1.5E-32coord: 10..108
score: 1.5
NoneNo IPR availablePFAMPF15365PNRCcoord: 139..187
score: 1.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g03520CmoCh12G003510Cucurbita moschata (Rifu)cmocpeB174
Cp4.1LG07g03520CmoCh05G003190Cucurbita moschata (Rifu)cmocpeB750
Cp4.1LG07g03520Cla022411Watermelon (97103) v1cpewmB782
Cp4.1LG07g03520Csa2G345930Cucumber (Chinese Long) v2cpecuB824
Cp4.1LG07g03520MELO3C011356Melon (DHL92) v3.5.1cpemeB761
Cp4.1LG07g03520ClCG08G014190Watermelon (Charleston Gray)cpewcgB748
Cp4.1LG07g03520CSPI02G16680Wild cucumber (PI 183967)cpecpiB825
Cp4.1LG07g03520Lsi08G013070Bottle gourd (USVL1VR-Ls)cpelsiB685
Cp4.1LG07g03520MELO3C011356.2Melon (DHL92) v3.6.1cpemedB897
Cp4.1LG07g03520CsaV3_2G024250Cucumber (Chinese Long) v3cpecucB1018
Cp4.1LG07g03520Bhi04G000107Wax gourdcpewgoB1029
Cp4.1LG07g03520Carg09396Silver-seed gourdcarcpeB0205
Cp4.1LG07g03520Carg03984Silver-seed gourdcarcpeB1368
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g03520Cp4.1LG11g02570Cucurbita pepo (Zucchini)cpecpeB146
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g03520Cucurbita pepo (Zucchini)cpecpeB427
Cp4.1LG07g03520Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g03520Cucurbita maxima (Rimu)cmacpeB797
Cp4.1LG07g03520Wild cucumber (PI 183967)cpecpiB850
Cp4.1LG07g03520Bottle gourd (USVL1VR-Ls)cpelsiB662
Cp4.1LG07g03520Watermelon (Charleston Gray)cpewcgB732
Cp4.1LG07g03520Watermelon (Charleston Gray)cpewcgB735
Cp4.1LG07g03520Watermelon (97103) v1cpewmB808
Cp4.1LG07g03520Cucumber (Gy14) v2cgybcpeB987
Cp4.1LG07g03520Silver-seed gourdcarcpeB0572