Lsi08G007710 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi08G007710
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNAC-domain containing protein 2
Locationchr08 : 16099082 .. 16109859 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTATTAGTTTCATGACCAGAGGATTCAATTTGATGAAATTTAAACCTGCACTAAATGAATTGTTCTCAAGAATCAATATGATTACATACGATTCTTGGTTTTTAGGGAGATACAAGGCTGATGATATAGCCACCATTGAATCGTTTTCCTTATTCAAGAACTGCCAACCTTTTTTCAAATATGTTTATGAGGTCTTTCTGTCCTTCATAAGATGATGAGGGTCTGACAAAGACAGCTTCTATATAATGTATAATGATTTAGTATCCATTTGATATTTTTAGCTTTACGAGTTCCGGTGTGATAATAATTTCTTGTCCCTTCTGCTATCGGCCTTGGATTTGTTTTACTAATTTTTTATTAAATGCATGATTTTGCACCTTGATATTATTGTTTATCCCATCTTCAATCTTTTTGATACACATGGTGGCAAACTTAAAATTTTAATAGCAAAATTCGGGGTTTAGACACCTGTTCATTGGTCATTGTGTTGCTTTATTATTGAAAGTGTTGAATTGCACTCACCTCTTAAAAAAATTCAGGAATATCAACTTAGTTATGTTGAATATATACGTGAGGAATAAGTGAAAATATCCTTGCATTAAGTTTAATGACTATCTGGCTTTGTTTGTCAAACAGCCGTTTGGCCCCCAGAATATAGCATCGTTGATTTATAGTCAAATTCCTAATTGTTGATTTATTATTTTACTGCTTAGGCATTGGGATATAGTCATGGCCGTTCTTACACTGGGAATATGCAGCAGGTATGTAGATTCCTATTTCTGTGTTATCATATTGACATCAGCAGATTACTAACATGCATTACCATGAAAAGAGAGTTCTTGCTTACACATGCGCGAAAAACTTTAGAAGAACGTTATGGAACAATTATGATTTTTGTAGGTTAGCCATTTAAGTTAAGTTCATTGAAGTTCAAATATCTTGTTGTAATCCAGATTTGTCTTTGCAAAAGAAGTTCTAAATGTCGGCTCGGAATTTAAAAGGGAATATCTCTTAATGGAACTTACTTTACGGTTAAATACCTTTATCTGGTTTATTAGGCAATGTATTCTTTGTAAGGCAAAATTGTAACAGGTAAAAGGGATACAAAGGGAAGCACCCCACACAGCCAAGAAACAAACACACACACATACACACGCAATACACACGCAAGATAAGGAAAGCACGAGAACCTTCTGGCAAATGAAGTTGTCTCAAACTCAAAGAAACAGTTCACTAATTTTATGATTTTTTATTTTCAATGACAAAGGAGAGGGAACAGATATATGAAGGCAACCATTTTAACGAGTATTTAGTCCTGCCGTAAATGTGGATTAAGGATACTGAGTTGTATTTACTTAGTTCCTTTGAATTTAGGATGGATGCATTTTTATAGATGACAGAACTGAAATATCATTGCTGTATTTTTTTTGCAAGTTAGGAAAGGGTTACGCGTTATTTTTCTGTCAATTATTGCAATTTCTTCATATTTTTTTGTTCTACATTCTTTTATATCTTCCAAGTTTTAGACATTTATACAAAGGTTCCTTCGATCGTCATGGATCAAATGCTACAAGTTCTTGTATCCCCGCTAAGATATATCAACCGCATTAACAGGTGAGTTGAAAAACATCAGACAAATACTCTAGAAAGTGCCTTAAGTTGGCATGGAAGGCCATGGTGATCAGAAGATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTTCGTGTTGCACTTCCTGGCGTGCGAAAAGATCGAAGTAAGCCTTGTTTTGTCTTGTTATCTTTTATCATTCTAGCTTTTGCATTGATCTGATCCTGCTTATACCTATGAAATGTTAAATCCGGGACCGATCCGTTATATCATATGTTTGCTTATTAGAGAGATAACCAATTAGACAAATCTCCAGGTAAGGTAAAATTTGAGATACAAAGCGACGGTAAGGTTCAGATTGAAGGAGTGATGACAGGTCCAAGCTTTTTAAAAGAATCATCCGCTATGTACCAGATGAAAGTCCAGCAACTGTGTCCTCCAGGACCTTTTACAGTTTCTTTTAAGCTGCCTGGACCGGTTGACCCGCGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCACATCCTACAGTGGCTGATTCCCACCCACCACTGTGAGTATGATGTAGGTACATGAATTTGCTCTCCTTTTGTTTTTGATTACCAGGCACTGGCATTACCCAAAGACTTAAAAATGATGGCAATGGATTTTTTTTTTTCTTTGGGAATAGAGTATTCATATTTTTCTATGTTAATTTTATTTTTGTATGAACCTAGGGCGTTAAATTTATGAACTGTTCTCCCTGAACTTGTCAAAGTTTTACTGTGTTTATCAAGTCCTTGCTAATTCTATAACATCCATGCTACATGACATGTTGATTGTATGTCGTATAATCTCTTATTAATATAATTATCATTTCGTATAGGTGTTAAATTGATGAAGTTAATAACCACAAATTCAAAGTTTCATAAACTTATTTGAAAATTTTAAAAGTTTATGGACTAAATCAATAGACATCAACAAAATTTAGGGACTAAATTTGTAATCGAGTACACCATAATACATGGAACGAAAAGACAAACAATGAAAAAAATATATGATGAAATATATGATGAAGATGAATTGTTATGAGTAATGGGCATGCGACTATAAGCAACACGCTTTGAACAAGTATGACTATGACACTATGTGACTCTAATACATGCCCCTCTCACTAATATTTCTTTTCTTGTACATGTAAAAAAATTGCTAAGGTCCTCAGAGCTTAATTTTCTTAATGTTCTCCAAATAGTTTCAAAGTTCAAGGTTTTCCACGTCCAAAATTCTATTCAATTGTGTTATATATTACTATTAGATATAATCTTTGGACCATCTTCCTAATATAATTTTGTTTCTAGACATCTTTTAATCTATTATAAGATTAAGAGTGTGTTTGATTTAACTTTTCAAGTGTTTAATTTTAAAAATAAGTCATTTTAGAATAACTTGAACGGTTTGGCAACTACTCAAAATAGCTTATAAAACAATTAAGTTTAAGAAATAAGTTAGTTTAGGAGAAACACTTGAAACCAACTTTTAGAAAAATAACTTTTGAGTGTTTAATGGTTATTCTTTTTCTAATTTGTAAAATTTTTAAAATTACCAAAATGTCTTCAATGTTGTTGTGGCTACCACTACTCTCTGCGGGCCACCTCTGATGATCACCTTCGACAATTTACTCTGGCGAAATTTTTGGCAATCATCTTCGACAACCAACTCTGATGGCCACTTCTGGCGACCACCTCTGACCACCACCCCTGGCCAACTATGGCAACCACTAGCCAATTTTGTCCACCTCTGTTGACGACCAACTCTGGCAACAATAGCCGTCGACCACTGTCACCGGAAAACTCTAGCGACCACCCACCAAGACAACCAACTCTAGCGACAATTATTTTAAATTATTAGTTCATAGTATTTTATAGTCGTCCATTATAATAATTTGACATTAATAAAAATATAATAAACCAAACAAACTTGTATATAAAAATATTTTAACAAAGAGTTGCTAAATATGTTTTTATTTTAAACAGTTTTTATAAAAAATATTTAAAGTTATTTTCAAATATAAAAAATGTGCCAAACTATTTACAAATATAGAAAAATTTTACTATAGACAGCGATAAACAATGAAAATTTTCTATATTTGTAAATAGTTTGATATTTCTTTTTGTTTGTAATAATTTCTCAAATATTTAAATCAAATGACTATTCAAATCAATAAATCGTGATAAGAACAAAAAAGGACAATGAAAATTGAAATGAAAATATAGTGTAAGTAAGACTTAATGGCAATAAACTCATACAAACTATTATTGCTACAAAGAGAAGAATCTGTTTCCGAATCTAGCCATTCCAATCTCAAGCCTTGGAAGCCTTCATCATTAGATCCTAATTAGTCTCTTTGTCCCTATGTAGTGGTTTCTCATCTTCAAATTCCCTTTATTTCCCCATCTTTTAGCAATATTTGGATAATCAATCTTTATCCATTTCATTCTAATTTTTTTTTTAAAAAAAGGTATGAAGATCGAGTTTATTATGTGAAATCTATACGGGGACATTAAATGAGATGCACAAAAATGAGTACAACTTAAGATGCACCTAAATATTTTTTTCTCTCTCCTGTGTTCTTGCCCAAAAATTTCAGTTTTTAAGCATCTAACATGAAGGTGCTTTGGATACTAACTTTTCTTAGGTTGATCTTTTTGTTAAGGAGGTTTTCAACTTCATTGGTTCTGTAAATATCTTCCATTTTTGTAAAATTTTAAAGAGGAGAATAAAGCTGTGCACAATTTAACATAACTTTCTCTTATGGGTTTTCTTAGATTTGAAAAGATGTCTTTCCAACTTCTATTCTCTCTCCTTCTTTGATGGAGGTCGATATATTTGGTGTTTAGCTATTTCAGTGCTTAATGAATTCCTGTTTTTTTTCTCTCTCTTTAAAAATGTGTTTTCAAGGCGCTTAGAATTTTATGTTTTGTGATCAAATAAGATGCCATAATATCTAATCCACACTGTCCATAATGTCAATGGTCATTGAGACATTGTTCTCTTGAAAGTTCTTGCTATAACACTCCTCATTACAATCTTAATGCTCCAAAACACTCCTCCCAAAGCTAACCGTAACTAAGTCTAAGAATAGCTCACTTTGTGGGCGCTATATAGTACACCTAACCAATTCTTCCAATTGTCCTAATGAAGACGAGACATGTATCGCAATATAACCTAGACAACATTCTAGGTGATCATCAAACATTTTAGTTAGGAGAGTCTTTTTATATGAATCAGAGTAACTGTCATTAAAAGTCGTCTTGGTCGCCACCATGATGCTTTCTCTCAATATGGTTTATACTACATGAATTGGTATTTTCTAAGTTTCTTTAGTCATTGCATTGCTATTATCATAATAGAGTTGAGTGTGCTATTCCTAATCATATCTGAAACATTTTTCAAATTTTCAAAGAACTATGAATCATAGAAGTCCTTTTGCTCCTTTACAATCAAAACCATTTAACTTGTATACCATATTTCACTATTTAGGGTAAAACTTATCTTACTATAGATTTCTCTAAATCTTTGTAAGAATGAGTATATCGTGTAAAGATCAAATCATATACAATTTTTTTTCTTAATTATCCATATATACTTTGAGAGTTTTAATTTCTTGCTTAATAGTCATACCATTAGTTTAATTATAATATGCTAACCAATTGTATATTAAATATTATTAAATCTCATTCTATATTAATTATTTCTTGTACTTATGATAGATAGTTAATCATATGCTCTCAACCTTTGAGGTATCTTAGAATACACTTCCTATGACAAAATAACTCAATATTTAGAATGATATACATACTTGACAATAATTTTATCAATATTAAGAAATAGTAGACAAATTTATTATCATCGACATTTACATCTGAATATGAATTTGAATCTACATCGACATGTGAGAAAAACAAATAGGAATTGAACCAAATCTAGAAAGTTCATCGTATATATATTTTCATCTCTTAGCTATTTCTAACCTCAGAAAACGACATATCTAAAACAAAACCAAACCCCACATTATTTGAGAGAGTGGCCATAACCTAATTTAAGCTCACAAATGAATTGTTGTAGTCAAGATGGTCCAATAAAACAAGAGTAGATTCCTAGGCAGTCCATGCTCTATATAGTGGGGGCTAATACAACAAAGAAATGGCCCTACCCCTACATATAATGACACTCTTCTACATTACACTACTATATACATGTCCTTATTATTATTATTATTATTATTATTATTATTATTATATCATATCCTCCTGAAAACAAGAATCCAAGGCTTTTCCCACTTATCACAGTCAATCTGACGACATATCCTTCTATTATTTTTCATAGACCGATTGAAGGTCGGTCATAGCCTTCGCTTTCTAATGAATGCATGGTCTCACAACTCTCCACCCTTCTCATTTTTCTCCTTATTCAAAACTCTTCACATTTAATTATTTTTAGCTCATACCAAATCAAGCCCCACATGGCTCACCAGTCACCACCTTTCTTTATTATAAGCTACCTCCCGGTCGATGATTCTCGCTCCGATGCTAACCGTTGCAGTCTCGGTTTTGTAGTTTTAGTCTCTTTTTCTTAGCTTTCTGGTCTATTTGCTCGTGAGGGTTGGCAAGGGTGGAGATGGAGTAGAAAATAGTGATTTTTTTTTTTTTGTTAGGGAGGTGGGGGGGAAATATCTTGTTATTGTTTAAAGTGGTTTGAATTTTGGTTGTTCAAATGAAATAAAAGAAAGAGTTAATAAATTTGAGCATTAGTCAAGAGTGTTAAGAGTAGCCCCCACTTGATGTGTCCACTATTGACTTGTTTCATGCACCAACTACATTTGGAAAAAAAGAGATTTAAGGAAGGAGCGTGTACGTGTAATTCCCATTTTGACTGTCTTCTATCATAATTTTATAGGAAATTTTTACGAAAAGAAAAAATGTCAAACTATTTATAAAAAATAGTAAAAAAAAGATACTAATAGACATTGATAGACTTTTCTCATCATCTATCAATGATAGACTTCTATCAGCATCTATCACTGATAGACTTCTATCATTTCTATCACTGGTAGACCCTAGTAAACTTTTATCAGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTGTGTTAATAGTTTCCTTATTTCTCTATTTTAAAAATTCCTGACTTATAAGGTTAAATTTTAAAATTTTCTCATTCATAATTGGAAGACTATGTTTTATAGATAAAAAATAAAAGGAAGTAGAAATATAATGTACAATTTTATCTTTCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGTTAAAATCTAGCTATTTCTCAATAGAAATGTATTACTCTGCCCCGCTTTCGAGAAAATGAGATCTTACTCCAAAACAAAAGGACTTGTCTGATTTACACAAGAAAAACGAAAGATAAAATAAAGGTCTATTTTGTAGGGAATTCAAATTCTATTTTATATTTTTATATCTATTAAATTTAATAAATATGCGTTTGGTAGGCCGTTTGAATTTTATTTTTAAAAACTATTTATGGATTATGTGATCTAAATAGTGCAAATTCTAAAAACTACATTTTTATGTTTTCAATATATTCTGATTTTGATATTGAAATTATCAATTGTTTAAATAGATTATCCATCAAATTTTAAACAATTGTTTAAATTGAAATCTAATTTATGAATTTGCTACTAAACACATATCTAAAAATATGAAATACAACTATGTTTTCAATAAATTTCTTATTTTCAAATTTCTATTTTCAGATTACCTATCTAACATGCCTAGGTTTCTTAAGACTACCATTAATGTAAGATTACATTTTAAATGAGAATATCACTATTTTTAGTTTAACAATATCAAACTTCCAATTTTTTTTTGAAAACATATATGCTTAAACCAATTAAACTATGCTGCTCAAATTAAATAAATGAAAATATTTTTTTTTTAAAAAAAAACACTTTCCAAATCGATTCTTATTTGTTTTCTAGTGAAAGGGTAGCTTTAGTGGTTGAATTATTTTGTATGAATCCACCTATTTACTAAATCAAATAGAATTAAACTCATAAAAACAACACCGTAAAATATTTAAATTTCTAATCTTTTAGTTGATGATATATATATCTTAACCAGTTGAACTACATTTAGATCGATTAAAAGTCGGCAGGAGTTGATCTGTATATCCAAGTAGGGTTTTTAATGAACCTTAATAACAATTTAGCAAAGGACCAAAAAAAAAGTAAAAGTGAGTAGTAGTTTGAAGAGAATAAGGGATTCAAAGGTTTTTTTTTTTTTTTTTTTCAATTCAACGGAAAAAGCATCTTTCTTTTGAGCTATTCATTTTGCATTCAATGGCTTCTCCATTGACCCACCAATTCGTTAACTTTAAAATTTCATTTTTATTTTATTTCATTTTATTTCTTTTGTCCTTTCTAAGACAACCAATCGTCCGGAAAAAGGTGAAATAATTATAATAAAGTGTTTGTCTTGATTTATTTATTTATTTTCTCACAATTTCTTCAAAAGGCCTTTTAAATTCTAAAAATTATTCCCCCTTTCTCTACAGTAACTTACAAAAACCACATTATTATTATTACTACTATTATTATTATTTCTCTCTAGCTTCAACAAATGTTTGGAATTGAAGAAGTTATTGGAGAACTAAATAGAGAAGAAGAAGAAGAAGGTGGTGATAATGGTAAAGAGATCATCAACAAGAATAATAAGCATAGATTATTGCCACCAGGTTATAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAAGTCTTCAAACCTTCCAATTTTCATCATGGTGTCAACATTGCTGAAGTTGACCTCAATCGATGCGAGCCTTGGGAACTTCCAGGTACGTACTGATTAATTCAAAAACTTAAGTTGATAAGTTACGAGCATACGTAATAATTTGTTTTTGTTTTTCAGAAGAGGCAAAGATGGGGGAAAGAGAATGGTATTTTTTCAGTTTAAGAGTGAGAAAATACCCAACAGGATTAAGAACTAATAGAGCAACAGTGGCTGGTTATTGGAAAGCAACAGGGAAAGATAGGCAAATTCACAGTAGTTCTAATGGAATGAAGCTTGGAAGTAAGAAAACTCTTGTGTTTTATAAAGGAGGTGCTCCAAGAGGCATTAAAACCAAGTGGGTTATGCATGAATATCGCCTTCACTCTGATCTTGCTTCTCCTAATCTTTGCAAGGTTCATTTTTCATATCATTATATTCATTTCCTTCATTCAAATATTTGTTTTTCTAACATTATTTTGAGTGATTTTGAGATTTTGATTTACAATGAATTCTGTTGTTTGTTCGTGGTTAGAAGTTTTGTGTAAATACTTTAATATCCTTCTTTATTATCTCATTGATTTTGTTTTTGGATTGATTTCAAATGAATTTCAATGTTAAAGGATGGATTTTTAAATTTTGTTTTTAATTAGTAATTGTTGTGGCTTGATTGCTTCTCTTCATGAGGTTTTTCTTTATATTAAAGAGATTTTTCTTTTATGGTTGATTATAGTGTCTTGTAATTGTCGTGTTCGTCTTAATTAAAAAAAATGTTATGATATAAGTTGAAGGTTTAAATCTCCACCCTCTTGTATTATTAAAGAAACACTTGACAAACAAAAGATAAAATTCTAGAGACAAAAATAATAGAATTTACAAATTTTTTTTTATGTACATTTGATAACCATTTGATTTTGGTTTTTAGTTTTTGAAAATTAAGTTTATAGACGCCCATTTCACCTTGATTTTTTTTTCTTTTTTGGTTTATTATCCACTTTCTATCAAGGTTTTTAAAAATCAAGAAGTCAAGTTGTGAAACTAAAAAAAAAAAGTCTTTTTTAAAAGTGGTTTTTATTTTTGGAATTTGGACTAAGAATTGATCCACTCTTCTACTTAAGAAAGATGAATATCATTGTAAGAAATTGAAAGAAAATAGACTTAGTTTTCAACAACAAAAAGCAAAAAGCTAAGATCTTGATTTGTAACCATTTGGTTTTTTGTTTTTTGTTTTTGAAATTTATGCTTGTTTTCTTCTAATTTCTTATTCGGAATTTTCGTATTTCCCATGTAATCATTTGGATTCTTAGCCAATTTTCAAAAACAAAAATAAGTTTTTGAAAACTACTTATCCAAAATTTTGAAAACACTCCTAAAACCTAGATACAAAACATAGAAACCAATGAATGTAAATAAATTTTTAAAAACCGAAAACAGTAAATGATTATAGGACTTTGATTTTCAATCAACATACTAAATGAAAAGACTATATTAGTAAACATTTTTGTCTTTCCATTTCCTAACATGAACATCAAAATAGTATTTTTCTTCGGTATTTTTTTAAATTACATTCATTTCAAATCTTTTTAGCAGGACGAGTGGGTTCTATGCAGGATAATTCATAAATCTGGAGAGAAAATAAAACCAAGATCCTTCCAAGAAGCAATTCCCTCTCCCATTTCTCTTCCTCCATTATCACTCGACACACCTCAAACAACCATCCACCATAACAACATCCGATTCCAAACATCTCTAAACAACAACAACAACATTATTCAGCATCGCCATGAAAATGACCTCCAAAGCTTCATCATCAACAACCCACATTTCATTTTCCAATCCAACCTCTTTCCATTTGGCTTAAATAATAACCTCGACGACACGCCGCCATCGATTCAATCGACCGACGCGAACTATCACGCCCATTTTAACCCATCCTTGTTGCTCGATGGCGGCTGCGACAGCCAGCAGGCCTCGAGTTTCGGTGTGGACAGCGGCGGTGCGTTGGTTGATGCCGCTGCTTATGGAGGTGGTCGGGGTGATCAGTCTGATGTTTTGTGTTAGATTATTATTATTATTATTATTATTCTCCCAAACACACAGATCCCGAAGCATTTTTCTTTCTCTCTTTTGCTGTGTTTTGAATGATGATGCTCGAAGATCGATGTTAGTACAATAATATTAATATCTACTTGGGATCGACTTGCTAAATTTATGACATTTTCGTGGAAGAGTTTGTGC

mRNA sequence

ATGAAGGCATTGGGATATAGTCATGGCCGTTCTTACACTGGGAATATGCAGCAGAGAGATAACCAATTAGACAAATCTCCAGGTAAGGTAAAATTTGAGATACAAAGCGACGGTAAGGTTCAGATTGAAGGAGTGATGACAGGTCCAAGCTTTTTAAAAGAATCATCCGCTATGTACCAGATGAAAGTCCAGCAACTGTGTCCTCCAGGACCTTTTACAGTTTCTTTTAAGCTGCCTGGACCGGTTGACCCGCGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCACATCCTACAGTGGCTGATTCCCACCCACCACTCTCATACCAAATCAAGCCCCACATGGCTCACCAGTCACCACCTTTCTTTATTATAAGCTACCTCCCGGTCGATGATTCTCGCTCCGATGCTAACCGTTGCAGTCTCGGTTTTCTTCAACAAATGTTTGGAATTGAAGAAGTTATTGGAGAACTAAATAGAGAAGAAGAAGAAGAAGGTGGTGATAATGGTAAAGAGATCATCAACAAGAATAATAAGCATAGATTATTGCCACCAGGTTATAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAAGTCTTCAAACCTTCCAATTTTCATCATGGTGTCAACATTGCTGAAGTTGACCTCAATCGATGCGAGCCTTGGGAACTTCCAGAAGAGGCAAAGATGGGGGAAAGAGAATGGTATTTTTTCAGTTTAAGAGTGAGAAAATACCCAACAGGATTAAGAACTAATAGAGCAACAGTGGCTGGTTATTGGAAAGCAACAGGGAAAGATAGGCAAATTCACAGTAGTTCTAATGGAATGAAGCTTGGAAGTAAGAAAACTCTTGTGTTTTATAAAGGAGGTGCTCCAAGAGGCATTAAAACCAAGTGGGTTATGCATGAATATCGCCTTCACTCTGATCTTGCTTCTCCTAATCTTTGCAAGGACGAGTGGGTTCTATGCAGGATAATTCATAAATCTGGAGAGAAAATAAAACCAAGATCCTTCCAAGAAGCAATTCCCTCTCCCATTTCTCTTCCTCCATTATCACTCGACACACCTCAAACAACCATCCACCATAACAACATCCGATTCCAAACATCTCTAAACAACAACAACAACATTATTCAGCATCGCCATGAAAATGACCTCCAAAGCTTCATCATCAACAACCCACATTTCATTTTCCAATCCAACCTCTTTCCATTTGGCTTAAATAATAACCTCGACGACACGCCGCCATCGATTCAATCGACCGACGCGAACTATCACGCCCATTTTAACCCATCCTTGTTGCTCGATGGCGGCTGCGACAGCCAGCAGGCCTCGAGTTTCGGTGTGGACAGCGGCGGTGCGTTGGTTGATGCCGCTGCTTATGGAGGTGGTCGGGGTGATCAGTCTGATGTTTTGTGTTAGATTATTATTATTATTATTATTATTCTCCCAAACACACAGATCCCGAAGCATTTTTCTTTCTCTCTTTTGCTGTGTTTTGAATGATGATGCTCGAAGATCGATGTTAGTACAATAATATTAATATCTACTTGGGATCGACTTGCTAAATTTATGACATTTTCGTGGAAGAGTTTGTGC

Coding sequence (CDS)

ATGAAGGCATTGGGATATAGTCATGGCCGTTCTTACACTGGGAATATGCAGCAGAGAGATAACCAATTAGACAAATCTCCAGGTAAGGTAAAATTTGAGATACAAAGCGACGGTAAGGTTCAGATTGAAGGAGTGATGACAGGTCCAAGCTTTTTAAAAGAATCATCCGCTATGTACCAGATGAAAGTCCAGCAACTGTGTCCTCCAGGACCTTTTACAGTTTCTTTTAAGCTGCCTGGACCGGTTGACCCGCGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCCAGAGCACATCCTACAGTGGCTGATTCCCACCCACCACTCTCATACCAAATCAAGCCCCACATGGCTCACCAGTCACCACCTTTCTTTATTATAAGCTACCTCCCGGTCGATGATTCTCGCTCCGATGCTAACCGTTGCAGTCTCGGTTTTCTTCAACAAATGTTTGGAATTGAAGAAGTTATTGGAGAACTAAATAGAGAAGAAGAAGAAGAAGGTGGTGATAATGGTAAAGAGATCATCAACAAGAATAATAAGCATAGATTATTGCCACCAGGTTATAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAAGTCTTCAAACCTTCCAATTTTCATCATGGTGTCAACATTGCTGAAGTTGACCTCAATCGATGCGAGCCTTGGGAACTTCCAGAAGAGGCAAAGATGGGGGAAAGAGAATGGTATTTTTTCAGTTTAAGAGTGAGAAAATACCCAACAGGATTAAGAACTAATAGAGCAACAGTGGCTGGTTATTGGAAAGCAACAGGGAAAGATAGGCAAATTCACAGTAGTTCTAATGGAATGAAGCTTGGAAGTAAGAAAACTCTTGTGTTTTATAAAGGAGGTGCTCCAAGAGGCATTAAAACCAAGTGGGTTATGCATGAATATCGCCTTCACTCTGATCTTGCTTCTCCTAATCTTTGCAAGGACGAGTGGGTTCTATGCAGGATAATTCATAAATCTGGAGAGAAAATAAAACCAAGATCCTTCCAAGAAGCAATTCCCTCTCCCATTTCTCTTCCTCCATTATCACTCGACACACCTCAAACAACCATCCACCATAACAACATCCGATTCCAAACATCTCTAAACAACAACAACAACATTATTCAGCATCGCCATGAAAATGACCTCCAAAGCTTCATCATCAACAACCCACATTTCATTTTCCAATCCAACCTCTTTCCATTTGGCTTAAATAATAACCTCGACGACACGCCGCCATCGATTCAATCGACCGACGCGAACTATCACGCCCATTTTAACCCATCCTTGTTGCTCGATGGCGGCTGCGACAGCCAGCAGGCCTCGAGTTTCGGTGTGGACAGCGGCGGTGCGTTGGTTGATGCCGCTGCTTATGGAGGTGGTCGGGGTGATCAGTCTGATGTTTTGTGTTAG

Protein sequence

MKALGYSHGRSYTGNMQQRDNQLDKSPGKVKFEIQSDGKVQIEGVMTGPSFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAHPTVADSHPPLSYQIKPHMAHQSPPFFIISYLPVDDSRSDANRCSLGFLQQMFGIEEVIGELNREEEEEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEWVLCRIIHKSGEKIKPRSFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNIIQHRHENDLQSFIINNPHFIFQSNLFPFGLNNNLDDTPPSIQSTDANYHAHFNPSLLLDGGCDSQQASSFGVDSGGALVDAAAYGGGRGDQSDVLC
Homology
[Close]
BLAST of Lsi08G007710 vs. Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.8e-67
Identity = 140/292 (47.95%), Postives = 182/292 (62.33%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEEEEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVFK 217
           M  +E+V+ EL  EE  E G               LPPG+RFHPTDEELI FYLASK+F 
Sbjct: 2   MLAVEDVLSELAGEERNERG---------------LPPGFRFHPTDEELITFYLASKIFH 61

Query: 218 PSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYWK 277
                 G++I+EVDLNRCEPWELPE AKMGEREWYF+SLR RKYPTGLRTNRAT AGYWK
Sbjct: 62  GGL--SGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWK 121

Query: 278 ATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEWV 337
           ATGKD+++ S   G  +G KKTLVFYKG APRG+KTKWVMHEYRL +D +  + CK+EWV
Sbjct: 122 ATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWV 181

Query: 338 LCRIIHKSGEKIKPRSFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNIIQHR 397
           +CR+ +K+G+    R     I + IS   L   +  TT HH++      +  +N  +   
Sbjct: 182 ICRVFNKTGD----RKNVGLIHNQISY--LHNHSLSTTHHHHHEALPLLIEPSNKTL--- 241

Query: 398 HENDLQSFIINNPHFIFQSNLFPFGLN-NNLDDTPPSIQSTDANYHAHFNPS 449
              +  S + ++PH  + +N F  G + +N+D+    I    +  +    PS
Sbjct: 242 --TNFPSLLYDDPHQNYNNNNFLHGSSGHNIDELKALINPVVSQLNGIIFPS 265

[Close]
BLAST of Lsi08G007710 vs. Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.6e-55
Identity = 105/158 (66.46%), Postives = 121/158 (76.58%), Query Frame = 1 

Query: 192 LLPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREW 251
           L+PPG+RFHPTDEELI +YL  KV   SNF     I++VDLN+ EPWELPE+AKMGE+EW
Sbjct: 19  LMPPGFRFHPTDEELITYYLLKKVLD-SNFSCAA-ISQVDLNKSEPWELPEKAKMGEKEW 78

Query: 252 YFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGI 311
           YFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP+G 
Sbjct: 79  YFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGE 138

Query: 312 KTKWVMHEYRLHSDLA---SPNLCKDEWVLCRIIHKSG 347
           K+ WVMHEYRL    +     +  KDEWVLC++  KSG
Sbjct: 139 KSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]
BLAST of Lsi08G007710 vs. Swiss-Prot
Match: NAC92_ARATH (NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.2e-53
Identity = 100/168 (59.52%), Postives = 120/168 (71.43%), Query Frame = 1 

Query: 186 KNNKHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAK 245
           ++ +H  LPPG+RFHPTDEELI  YL  KVF  + F     I EVDLN+ EPW+LP +AK
Sbjct: 13  EDEEHIDLPPGFRFHPTDEELITHYLKPKVF--NTFFSATAIGEVDLNKIEPWDLPWKAK 72

Query: 246 MGEREWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKG 305
           MGE+EWYFF +R RKYPTGLRTNRAT AGYWKATGKD++I    +   +G KKTLVFYKG
Sbjct: 73  MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKS--LVGMKKTLVFYKG 132

Query: 306 GAPRGIKTKWVMHEYRLHSDLASPNL---CKDEWVLCRIIHKSGEKIK 351
            AP+G+KT WVMHEYRL       NL    K+EWV+CR+  K  +  K
Sbjct: 133 RAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTK 176

[Close]
BLAST of Lsi08G007710 vs. Swiss-Prot
Match: NAC79_ARATH (NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.2e-52
Identity = 109/187 (58.29%), Postives = 129/187 (68.98%), Query Frame = 1 

Query: 193 LPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWY 252
           LPPG+RFHPTDEELI  YL  KV           I EVDLN+ EPWELP +AK+GE+EWY
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLG--FSAKAIGEVDLNKAEPWELPYKAKIGEKEWY 76

Query: 253 FFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIK 312
           FF +R RKYPTGLRTNRAT AGYWKATGKD++I    +   +G KKTLVFY+G AP+G K
Sbjct: 77  FFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYRGRAPKGQK 136

Query: 313 TKWVMHEYRLHSDLASPNL---CKDEWVLCRIIHK-SGEKIKPRSFQEAIPS---PISLP 372
           T WVMHEYRL   L++ NL    K+EWV+CR+ HK +G K  P S    I S     SLP
Sbjct: 137 TNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGSSLP 196

[Close]
BLAST of Lsi08G007710 vs. Swiss-Prot
Match: NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 2.6e-51
Identity = 102/169 (60.36%), Postives = 120/169 (71.01%), Query Frame = 1 

Query: 186 KNNKHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAK 245
           K  +   LPPG+RFHPTDEELI  YL  KV   S       I EVDLN+ EPWELP  AK
Sbjct: 9   KEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTS--FSAKAIGEVDLNKSEPWELPWMAK 68

Query: 246 MGEREWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKG 305
           MGE+EWYFF +R RKYPTGLRTNRAT AGYWKATGKD++I+   +   +G KKTLVFY+G
Sbjct: 69  MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKS--LVGMKKTLVFYRG 128

Query: 306 GAPRGIKTKWVMHEYRLHSDLASPNL---CKDEWVLCRIIHKS--GEKI 350
            AP+G KT WVMHEYRL    ++ NL    K+EWV+CR+  KS  G+KI
Sbjct: 129 RAPKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKI 173

[Close]
BLAST of Lsi08G007710 vs. TrEMBL
Match: A0A0A0KFF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355380 PE=4 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 7.9e-148
Identity = 274/337 (81.31%), Postives = 291/337 (86.35%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEE-EEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVF 217
           MFGIEEVIGELNRE++ EE   +GKE I K + HRLLPPGYRFHPTDEELIAFYLASKVF
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKH-HRLLPPGYRFHPTDEELIAFYLASKVF 60

Query: 218 KPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYW 277
           KPSNF  GVNIAEVDLNRCEPWELPEEAKMGE+EWYFFSLRVRKYPTGLRTNRATVAGYW
Sbjct: 61  KPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYW 120

Query: 278 KATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEW 337
           KATGKDRQIHSS NG+KLG+KKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPN+CKDEW
Sbjct: 121 KATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEW 180

Query: 338 VLCRIIHKSGEKIKPR-SFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNIIQ 397
           VLCRIIHKSGEKIKP+ SFQE +PSPISLP L L+  Q +I+H NI+ Q  L+N    IQ
Sbjct: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQ-SINHINIQSQPPLHN----IQ 240

Query: 398 HRHENDLQSFIINNPHFIFQSNLFPFGLNNN------LDDTPPSIQSTDANYHAHFNPSL 457
           H HEN L+SFIINNPHFIFQ NLFPFGLNN+          PPSIQ TD NYH HFNPSL
Sbjct: 241 H-HENGLESFIINNPHFIFQPNLFPFGLNNHDPHLTTPPPPPPSIQMTDTNYHPHFNPSL 300

Query: 458 LLDGGCDSQQASSFGVDSGGALVDAAAYGGGRGDQSD 487
           LLDGGCDSQQASSFGVDSGG LVD AAY G RGDQSD
Sbjct: 301 LLDGGCDSQQASSFGVDSGGTLVDVAAYRGARGDQSD 330

[Close]
BLAST of Lsi08G007710 vs. TrEMBL
Match: A0A061FGR2_THECC (NAC domain transcriptional regulator superfamily protein OS=Theobroma cacao GN=TCM_034835 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.9e-73
Identity = 163/294 (55.44%), Postives = 196/294 (66.67%), Query Frame = 1 

Query: 156 QQMFGIEEVIGELNREEEEEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKV 215
           ++M  +EE++ EL  EE  E G               LPPG+RFHPTDEELI FYLASKV
Sbjct: 36  EKMLSVEELLSELAGEELNEQG---------------LPPGFRFHPTDEELITFYLASKV 95

Query: 216 FKPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGY 275
           F  S    GV IAEVDLNRCEPWELP+ AKMGEREWYFFSLR RKYPTGLRTNRAT AGY
Sbjct: 96  FNGS--FCGVEIAEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGY 155

Query: 276 WKATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDE 335
           WKATGKDR+++S+S+G  LG KKTLVFY+G APRG KTKWVMHEYRL  D +  + CK+E
Sbjct: 156 WKATGKDREVYSASSGALLGMKKTLVFYRGRAPRGEKTKWVMHEYRLDGDFSYRHACKEE 215

Query: 336 WVLCRIIHKSGEK----IKPRSF-QEAIPSPI-SLPPLSLDTPQTTIHHNNIRFQTSLNN 395
           WV+CRI HK+GEK     + +SF  E   SP  SLPPL L+TP   +   +   QT +  
Sbjct: 216 WVICRIFHKTGEKKTALAQGQSFILEVSSSPASSLPPL-LETPTPFLESQS---QTPMQA 275

Query: 396 NNNIIQHRHENDLQSFIINNPHFIFQSNLFP---FGLNNNLDDTPPSIQSTDAN 441
            N+ + HR ENDL+S I  NP  + Q+ LFP     +  +    P +I S+  N
Sbjct: 276 QNSFVIHRQENDLKSLI--NP-VVSQTPLFPADGLQVQPSFSANPTTITSSTTN 305

[Close]
BLAST of Lsi08G007710 vs. TrEMBL
Match: W9QWF7_9ROSA (Protein CUP-SHAPED COTYLEDON 3 OS=Morus notabilis GN=L484_024816 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.5e-71
Identity = 153/282 (54.26%), Postives = 188/282 (66.67%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEEEEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVFK 217
           M  IEEV+ EL+ E+  E G               LPPG+RFHPTDEELI FYLASKV+ 
Sbjct: 1   MLAIEEVLRELSGEDVNEQG---------------LPPGFRFHPTDEELITFYLASKVYN 60

Query: 218 PSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYWK 277
            S    GV+IAEVDLNRCEPWELP+ AKMGEREWYFFSLR RKYPTGLRTNRAT AGYWK
Sbjct: 61  GS--FCGVDIAEVDLNRCEPWELPDAAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWK 120

Query: 278 ATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEWV 337
           ATGKDR+++S+S+G  LG KKTLVFYKG APRG KTKWVMHEYRL  D +S + CK+EWV
Sbjct: 121 ATGKDREVYSASSGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSSRHTCKEEWV 180

Query: 338 LCRIIHKSGEKIKP--RSFQEAIPSPI--SLPPLSLDTPQTTI-----HHNNIRFQTSLN 397
           +CRI HK+G+K  P  +  Q +  S +  +LP L   TP T+I      +NN    +S  
Sbjct: 181 ICRIYHKTGDKKNPLFQGRQSSSSSYLLEALPALMETTPPTSITNCTATNNNTNTNSSST 240

Query: 398 NNNN------------IIQHRHENDLQSFIINNPHFIFQSNL 419
           NNNN            +++ + +N +Q  + N+P F+   N+
Sbjct: 241 NNNNSTNISANISSVLMLECQTQNPMQGLLQNHPLFLNHVNV 265

[Close]
BLAST of Lsi08G007710 vs. TrEMBL
Match: A0A0B0MN74_GOSAR (Cup-shaped cotyledon 3-like protein OS=Gossypium arboreum GN=F383_18115 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.0e-71
Identity = 160/290 (55.17%), Postives = 192/290 (66.21%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEEEEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVFK 217
           M  +EE++ EL  EE    G               LPPG+RFHPTDEEL+ FYLASKVF 
Sbjct: 1   MLAVEEILSELAEEEVNGHG---------------LPPGFRFHPTDEELVTFYLASKVFN 60

Query: 218 PSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYWK 277
            S    GV IAEVDLNRCEPWELP+ AKMGEREWYFFSLR RKYP+GLRTNRAT AGYWK
Sbjct: 61  GS--FCGVEIAEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPSGLRTNRATGAGYWK 120

Query: 278 ATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEWV 337
           ATGKDR+++S+S G  LG KKTLVFYKG APRG KTKWVMHEYRL  D +    CK+EWV
Sbjct: 121 ATGKDREVYSASTGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSCRPSCKEEWV 180

Query: 338 LCRIIHKSGEK----IKPRSFQEAIPSPIS--LPPLSLDTPQTTIHHNNIRFQTSLNNNN 397
           +CRI HK+ EK     + +S+  A+ S  +  LPPL L+TP   +   +   QT +  +N
Sbjct: 181 ICRIFHKTIEKKNALAQGQSYVLAVSSSSTTFLPPL-LETPTPLLKSES---QTLMQAHN 240

Query: 398 NIIQHRHENDLQSFIINNPHFIFQSNLFPF-GLNNNLDDTPPSIQSTDAN 441
           + + HRHENDL+S +IN      QS LFP  GL  +   T  +  +TD N
Sbjct: 241 SFLIHRHENDLKS-LINPVVSQSQSQLFPSNGLQPSYSPT-STFATTDKN 267

[Close]
BLAST of Lsi08G007710 vs. TrEMBL
Match: A0A0D2TMA2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G186000 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 7.8e-71
Identity = 155/272 (56.99%), Postives = 183/272 (67.28%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEEEEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVFK 217
           M  +EE++ EL  EE    G               LPPG+RFHPTDEEL+ FYLASKVF 
Sbjct: 1   MLAVEEILSELAEEEVNGHG---------------LPPGFRFHPTDEELVTFYLASKVFH 60

Query: 218 PSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYWK 277
            S    GV IAEVDLNRCEPWELP+ AKMGEREWYFFSLR RKYP+GLRTNRAT AGYWK
Sbjct: 61  GS--FCGVEIAEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPSGLRTNRATGAGYWK 120

Query: 278 ATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEWV 337
           ATGKDR+++S+S G  LG KKTLVFYKG APRG KTKWVMHEYRL  D +    CK+EWV
Sbjct: 121 ATGKDREVYSASTGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSCRPSCKEEWV 180

Query: 338 LCRIIHKSGEK----IKPRSFQEAIPSPIS--LPPLSLDTPQTTIHHNNIRFQTSLNNNN 397
           +CRI HK+ EK     + +S+  A+ S  +  LPPL L+TP   +   +   QT +  +N
Sbjct: 181 ICRIFHKTSEKKNALAQGQSYVLAMSSSSTTFLPPL-LETPTPLLKSES---QTLMQAHN 240

Query: 398 NIIQHRHENDLQSFIINNP---HFIFQSNLFP 421
           + + HRHENDL+S I  NP       QS LFP
Sbjct: 241 SFLIHRHENDLKSLI--NPVVSESQSQSQLFP 249

[Close]
BLAST of Lsi08G007710 vs. TAIR10
Match: AT1G76420.1 (AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 256.5 bits (654), Expect = 3.3e-68
Identity = 140/292 (47.95%), Postives = 182/292 (62.33%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEEEEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVFK 217
           M  +E+V+ EL  EE  E G               LPPG+RFHPTDEELI FYLASK+F 
Sbjct: 2   MLAVEDVLSELAGEERNERG---------------LPPGFRFHPTDEELITFYLASKIFH 61

Query: 218 PSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYWK 277
                 G++I+EVDLNRCEPWELPE AKMGEREWYF+SLR RKYPTGLRTNRAT AGYWK
Sbjct: 62  GGL--SGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWK 121

Query: 278 ATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEWV 337
           ATGKD+++ S   G  +G KKTLVFYKG APRG+KTKWVMHEYRL +D +  + CK+EWV
Sbjct: 122 ATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWV 181

Query: 338 LCRIIHKSGEKIKPRSFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNIIQHR 397
           +CR+ +K+G+    R     I + IS   L   +  TT HH++      +  +N  +   
Sbjct: 182 ICRVFNKTGD----RKNVGLIHNQISY--LHNHSLSTTHHHHHEALPLLIEPSNKTL--- 241

Query: 398 HENDLQSFIINNPHFIFQSNLFPFGLN-NNLDDTPPSIQSTDANYHAHFNPS 449
              +  S + ++PH  + +N F  G + +N+D+    I    +  +    PS
Sbjct: 242 --TNFPSLLYDDPHQNYNNNNFLHGSSGHNIDELKALINPVVSQLNGIIFPS 265

[Close]
BLAST of Lsi08G007710 vs. TAIR10
Match: AT2G24430.1 (AT2G24430.1 NAC domain containing protein 38)

HSP 1 Score: 216.9 bits (551), Expect = 2.9e-56
Identity = 110/200 (55.00%), Postives = 136/200 (68.00%), Query Frame = 1 

Query: 193 LPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWY 252
           LPPG+RFHPTDEELI++YL +K+    NF  G  IA+VDLN+ EPWELPE+AKMG +EWY
Sbjct: 16  LPPGFRFHPTDEELISYYLVNKI-ADQNFT-GKAIADVDLNKSEPWELPEKAKMGGKEWY 75

Query: 253 FFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIK 312
           FFSLR RKYPTG+RTNRAT  GYWK TGKD++I +S+    +G KKTLVFY+G APRG K
Sbjct: 76  FFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGEK 135

Query: 313 TKWVMHEYRLHSDLASPNLCKDEWVLCRIIHKSGEKIKPRSFQEAIPSPISLPPLSLDTP 372
           T WVMHEYRLHS  +     +DEWV+CR+  K+    K                +S  + 
Sbjct: 136 TCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK---------------YISTSSS 195

Query: 373 QTTIHHNNIRFQTSLNNNNN 393
            T+ HHNN    + L+ NNN
Sbjct: 196 STSHHHNNHTRASILSTNNN 198

[Close]
BLAST of Lsi08G007710 vs. TAIR10
Match: AT3G15170.1 (AT3G15170.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-56
Identity = 105/158 (66.46%), Postives = 121/158 (76.58%), Query Frame = 1 

Query: 192 LLPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREW 251
           L+PPG+RFHPTDEELI +YL  KV   SNF     I++VDLN+ EPWELPE+AKMGE+EW
Sbjct: 19  LMPPGFRFHPTDEELITYYLLKKVLD-SNFSCAA-ISQVDLNKSEPWELPEKAKMGEKEW 78

Query: 252 YFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGI 311
           YFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP+G 
Sbjct: 79  YFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGE 138

Query: 312 KTKWVMHEYRLHSDLA---SPNLCKDEWVLCRIIHKSG 347
           K+ WVMHEYRL    +     +  KDEWVLC++  KSG
Sbjct: 139 KSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]
BLAST of Lsi08G007710 vs. TAIR10
Match: AT5G39610.1 (AT5G39610.1 NAC domain containing protein 6)

HSP 1 Score: 209.9 bits (533), Expect = 3.5e-54
Identity = 100/168 (59.52%), Postives = 120/168 (71.43%), Query Frame = 1 

Query: 186 KNNKHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAK 245
           ++ +H  LPPG+RFHPTDEELI  YL  KVF  + F     I EVDLN+ EPW+LP +AK
Sbjct: 13  EDEEHIDLPPGFRFHPTDEELITHYLKPKVF--NTFFSATAIGEVDLNKIEPWDLPWKAK 72

Query: 246 MGEREWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKG 305
           MGE+EWYFF +R RKYPTGLRTNRAT AGYWKATGKD++I    +   +G KKTLVFYKG
Sbjct: 73  MGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKS--LVGMKKTLVFYKG 132

Query: 306 GAPRGIKTKWVMHEYRLHSDLASPNL---CKDEWVLCRIIHKSGEKIK 351
            AP+G+KT WVMHEYRL       NL    K+EWV+CR+  K  +  K
Sbjct: 133 RAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTK 176

[Close]
BLAST of Lsi08G007710 vs. TAIR10
Match: AT5G07680.1 (AT5G07680.1 NAC domain containing protein 80)

HSP 1 Score: 206.8 bits (525), Expect = 3.0e-53
Identity = 109/187 (58.29%), Postives = 129/187 (68.98%), Query Frame = 1 

Query: 193 LPPGYRFHPTDEELIAFYLASKVFKPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWY 252
           LPPG+RFHPTDEELI  YL  KV           I EVDLN+ EPWELP +AK+GE+EWY
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLDLG--FSAKAIGEVDLNKAEPWELPYKAKIGEKEWY 76

Query: 253 FFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIK 312
           FF +R RKYPTGLRTNRAT AGYWKATGKD++I    +   +G KKTLVFY+G AP+G K
Sbjct: 77  FFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKS--LVGMKKTLVFYRGRAPKGQK 136

Query: 313 TKWVMHEYRLHSDLASPNL---CKDEWVLCRIIHK-SGEKIKPRSFQEAIPS---PISLP 372
           T WVMHEYRL   L++ NL    K+EWV+CR+ HK +G K  P S    I S     SLP
Sbjct: 137 TNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLIRIGSYGTGSSLP 196

[Close]
BLAST of Lsi08G007710 vs. NCBI nr
Match: gi|659129734|ref|XP_008464817.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo])

HSP 1 Score: 537.0 bits (1382), Expect = 3.5e-149
Identity = 278/340 (81.76%), Postives = 293/340 (86.18%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEE-EEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVF 217
           MFGIEEVIGELNRE++ EE  DNGKE I K + HRLLPPGYRFHPTDEELIAFYLASKVF
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKH-HRLLPPGYRFHPTDEELIAFYLASKVF 60

Query: 218 KPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYW 277
           KPSNF  GVNIAEVDLNRCEPWELPEEAKMGE+EWYFFSLRVRKYPTGLRTNRATVAGYW
Sbjct: 61  KPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYW 120

Query: 278 KATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEW 337
           KATGKDRQIHSS NG+KLG+KKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPN+CKDEW
Sbjct: 121 KATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEW 180

Query: 338 VLCRIIHKSGEKIKPR--SFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNII 397
           VLCRIIHKSGEKIKP+  SFQE IPSPISLP L L+  Q +I+HNNI+FQ   +N    I
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQ-SINHNNIQFQPPPHN----I 240

Query: 398 QHRHENDLQSFIINNPHFIFQSNLFPFGLNNNLDDT--------PPSIQSTDANYHAHFN 457
           QH HEN L+SFIINNPHFIFQ NLF FGL+N   DT        PPSIQ TD NYH HFN
Sbjct: 241 QH-HENGLESFIINNPHFIFQPNLFSFGLHN--PDTHLSTPPPPPPSIQMTDTNYHPHFN 300

Query: 458 PSLLLDGGCDSQQASSFGVDSGGALVDAAAYGGGRGDQSD 487
           PSLLLDGGCDSQQASSFGVDSGG LVD A YGG RGDQSD
Sbjct: 301 PSLLLDGGCDSQQASSFGVDSGGTLVDVAGYGGARGDQSD 331

[Close]
BLAST of Lsi08G007710 vs. NCBI nr
Match: gi|659129732|ref|XP_008464816.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis melo])

HSP 1 Score: 532.3 bits (1370), Expect = 8.7e-148
Identity = 278/341 (81.52%), Postives = 293/341 (85.92%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEE-EEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVF 217
           MFGIEEVIGELNRE++ EE  DNGKE I K + HRLLPPGYRFHPTDEELIAFYLASKVF
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKH-HRLLPPGYRFHPTDEELIAFYLASKVF 60

Query: 218 KPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYW 277
           KPSNF  GVNIAEVDLNRCEPWELPEEAKMGE+EWYFFSLRVRKYPTGLRTNRATVAGYW
Sbjct: 61  KPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYW 120

Query: 278 KATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCK-DE 337
           KATGKDRQIHSS NG+KLG+KKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPN+CK DE
Sbjct: 121 KATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDE 180

Query: 338 WVLCRIIHKSGEKIKPR--SFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNI 397
           WVLCRIIHKSGEKIKP+  SFQE IPSPISLP L L+  Q +I+HNNI+FQ   +N    
Sbjct: 181 WVLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQ-SINHNNIQFQPPPHN---- 240

Query: 398 IQHRHENDLQSFIINNPHFIFQSNLFPFGLNNNLDDT--------PPSIQSTDANYHAHF 457
           IQH HEN L+SFIINNPHFIFQ NLF FGL+N   DT        PPSIQ TD NYH HF
Sbjct: 241 IQH-HENGLESFIINNPHFIFQPNLFSFGLHN--PDTHLSTPPPPPPSIQMTDTNYHPHF 300

Query: 458 NPSLLLDGGCDSQQASSFGVDSGGALVDAAAYGGGRGDQSD 487
           NPSLLLDGGCDSQQASSFGVDSGG LVD A YGG RGDQSD
Sbjct: 301 NPSLLLDGGCDSQQASSFGVDSGGTLVDVAGYGGARGDQSD 332

[Close]
BLAST of Lsi08G007710 vs. NCBI nr
Match: gi|449453093|ref|XP_004144293.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 531.9 bits (1369), Expect = 1.1e-147
Identity = 274/337 (81.31%), Postives = 291/337 (86.35%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEE-EEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVF 217
           MFGIEEVIGELNRE++ EE   +GKE I K + HRLLPPGYRFHPTDEELIAFYLASKVF
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKH-HRLLPPGYRFHPTDEELIAFYLASKVF 60

Query: 218 KPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYW 277
           KPSNF  GVNIAEVDLNRCEPWELPEEAKMGE+EWYFFSLRVRKYPTGLRTNRATVAGYW
Sbjct: 61  KPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYW 120

Query: 278 KATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCKDEW 337
           KATGKDRQIHSS NG+KLG+KKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPN+CKDEW
Sbjct: 121 KATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEW 180

Query: 338 VLCRIIHKSGEKIKPR-SFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNIIQ 397
           VLCRIIHKSGEKIKP+ SFQE +PSPISLP L L+  Q +I+H NI+ Q  L+N    IQ
Sbjct: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQ-SINHINIQSQPPLHN----IQ 240

Query: 398 HRHENDLQSFIINNPHFIFQSNLFPFGLNNN------LDDTPPSIQSTDANYHAHFNPSL 457
           H HEN L+SFIINNPHFIFQ NLFPFGLNN+          PPSIQ TD NYH HFNPSL
Sbjct: 241 H-HENGLESFIINNPHFIFQPNLFPFGLNNHDPHLTTPPPPPPSIQMTDTNYHPHFNPSL 300

Query: 458 LLDGGCDSQQASSFGVDSGGALVDAAAYGGGRGDQSD 487
           LLDGGCDSQQASSFGVDSGG LVD AAY G RGDQSD
Sbjct: 301 LLDGGCDSQQASSFGVDSGGTLVDVAAYRGARGDQSD 330

[Close]
BLAST of Lsi08G007710 vs. NCBI nr
Match: gi|778715024|ref|XP_011657330.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 527.3 bits (1357), Expect = 2.8e-146
Identity = 274/338 (81.07%), Postives = 291/338 (86.09%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEE-EEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVF 217
           MFGIEEVIGELNRE++ EE   +GKE I K + HRLLPPGYRFHPTDEELIAFYLASKVF
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKH-HRLLPPGYRFHPTDEELIAFYLASKVF 60

Query: 218 KPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYW 277
           KPSNF  GVNIAEVDLNRCEPWELPEEAKMGE+EWYFFSLRVRKYPTGLRTNRATVAGYW
Sbjct: 61  KPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYW 120

Query: 278 KATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCK-DE 337
           KATGKDRQIHSS NG+KLG+KKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPN+CK DE
Sbjct: 121 KATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDE 180

Query: 338 WVLCRIIHKSGEKIKPR-SFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNII 397
           WVLCRIIHKSGEKIKP+ SFQE +PSPISLP L L+  Q +I+H NI+ Q  L+N    I
Sbjct: 181 WVLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQ-SINHINIQSQPPLHN----I 240

Query: 398 QHRHENDLQSFIINNPHFIFQSNLFPFGLNNN------LDDTPPSIQSTDANYHAHFNPS 457
           QH HEN L+SFIINNPHFIFQ NLFPFGLNN+          PPSIQ TD NYH HFNPS
Sbjct: 241 QH-HENGLESFIINNPHFIFQPNLFPFGLNNHDPHLTTPPPPPPSIQMTDTNYHPHFNPS 300

Query: 458 LLLDGGCDSQQASSFGVDSGGALVDAAAYGGGRGDQSD 487
           LLLDGGCDSQQASSFGVDSGG LVD AAY G RGDQSD
Sbjct: 301 LLLDGGCDSQQASSFGVDSGGTLVDVAAYRGARGDQSD 331

[Close]
BLAST of Lsi08G007710 vs. NCBI nr
Match: gi|659129736|ref|XP_008464818.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis melo])

HSP 1 Score: 525.8 bits (1353), Expect = 8.1e-146
Identity = 277/341 (81.23%), Postives = 292/341 (85.63%), Query Frame = 1 

Query: 158 MFGIEEVIGELNREEE-EEGGDNGKEIINKNNKHRLLPPGYRFHPTDEELIAFYLASKVF 217
           MFGIEEVIGELNRE++ EE  DNGKE I K + HRLLPPGYRFHPTDEELIAFYLASKVF
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKH-HRLLPPGYRFHPTDEELIAFYLASKVF 60

Query: 218 KPSNFHHGVNIAEVDLNRCEPWELPEEAKMGEREWYFFSLRVRKYPTGLRTNRATVAGYW 277
           KPSNF  GVNIAEVDLNRCEPWELPE AKMGE+EWYFFSLRVRKYPTGLRTNRATVAGYW
Sbjct: 61  KPSNFDLGVNIAEVDLNRCEPWELPE-AKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYW 120

Query: 278 KATGKDRQIHSSSNGMKLGSKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNLCK-DE 337
           KATGKDRQIHSS NG+KLG+KKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPN+CK DE
Sbjct: 121 KATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDE 180

Query: 338 WVLCRIIHKSGEKIKPR--SFQEAIPSPISLPPLSLDTPQTTIHHNNIRFQTSLNNNNNI 397
           WVLCRIIHKSGEKIKP+  SFQE IPSPISLP L L+  Q +I+HNNI+FQ   +N    
Sbjct: 181 WVLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQ-SINHNNIQFQPPPHN---- 240

Query: 398 IQHRHENDLQSFIINNPHFIFQSNLFPFGLNNNLDDT--------PPSIQSTDANYHAHF 457
           IQH HEN L+SFIINNPHFIFQ NLF FGL+N   DT        PPSIQ TD NYH HF
Sbjct: 241 IQH-HENGLESFIINNPHFIFQPNLFSFGLHN--PDTHLSTPPPPPPSIQMTDTNYHPHF 300

Query: 458 NPSLLLDGGCDSQQASSFGVDSGGALVDAAAYGGGRGDQSD 487
           NPSLLLDGGCDSQQASSFGVDSGG LVD A YGG RGDQSD
Sbjct: 301 NPSLLLDGGCDSQQASSFGVDSGGTLVDVAGYGGARGDQSD 331

The following BLAST results are available for this feature:
BLAST of Lsi08G007710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NAC31_ARATH5.8e-6747.95Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1[more]
NAC54_ARATH6.6e-5566.46Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1[more]
NAC92_ARATH6.2e-5359.52NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1[more]
NAC79_ARATH5.2e-5258.29NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1[more]
NC100_ARATH2.6e-5160.36NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1[more]
BLAST of Lsi08G007710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFF1_CUCSA7.9e-14881.31Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355380 PE=4 SV=1[more]
A0A061FGR2_THECC2.9e-7355.44NAC domain transcriptional regulator superfamily protein OS=Theobroma cacao GN=T... [more]
W9QWF7_9ROSA3.5e-7154.26Protein CUP-SHAPED COTYLEDON 3 OS=Morus notabilis GN=L484_024816 PE=4 SV=1[more]
A0A0B0MN74_GOSAR6.0e-7155.17Cup-shaped cotyledon 3-like protein OS=Gossypium arboreum GN=F383_18115 PE=4 SV=... [more]
A0A0D2TMA2_GOSRA7.8e-7156.99Uncharacterized protein OS=Gossypium raimondii GN=B456_009G186000 PE=4 SV=1[more]
BLAST of Lsi08G007710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76420.13.3e-6847.95 NAC (No Apical Meristem) domain transcriptional regulator superfamil... [more]
AT2G24430.12.9e-5655.00 NAC domain containing protein 38[more]
AT3G15170.13.7e-5666.46 NAC (No Apical Meristem) domain transcriptional regulator superfamil... [more]
AT5G39610.13.5e-5459.52 NAC domain containing protein 6[more]
AT5G07680.13.0e-5358.29 NAC domain containing protein 80[more]
BLAST of Lsi08G007710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659129734|ref|XP_008464817.1|3.5e-14981.76PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo][more]
gi|659129732|ref|XP_008464816.1|8.7e-14881.52PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis melo][more]
gi|449453093|ref|XP_004144293.1|1.1e-14781.31PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis sativus][more]
gi|778715024|ref|XP_011657330.1|2.8e-14681.07PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis sativus][more]
gi|659129736|ref|XP_008464818.1|8.1e-14681.23PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003441NAC-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
biological_process GO:0009855 determination of bilateral symmetry
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0010014 meristem initiation
biological_process GO:0010073 meristem maintenance
biological_process GO:0010199 organ boundary specification between lateral organs and the meristem
biological_process GO:0009887 animal organ morphogenesis
biological_process GO:0048507 meristem development
biological_process GO:0007389 pattern specification process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G007710.1Lsi08G007710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 194..322
score: 7.6
IPR003441NAC domainPROFILEPS51005NACcoord: 193..344
score: 55
IPR003441NAC domainunknownSSF101941NAC domaincoord: 191..344
score: 9.15
NoneNo IPR availablePANTHERPTHR31744FAMILY NOT NAMEDcoord: 161..177
score: 4.4E-117coord: 193..440
score: 4.4E
NoneNo IPR availablePANTHERPTHR31744:SF17PROTEIN CUP-SHAPED COTYLEDON 3coord: 193..440
score: 4.4E-117coord: 161..177
score: 4.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi08G007710Csa6G355370Cucumber (Chinese Long) v2culsiB470
Lsi08G007710CSPI04G27200Wild cucumber (PI 183967)cpilsiB320
Lsi08G007710CSPI06G18450Wild cucumber (PI 183967)cpilsiB478
Lsi08G007710Cucsa.077390Cucumber (Gy14) v1cgylsiB078
Lsi08G007710CmaCh01G020350Cucurbita maxima (Rimu)cmalsiB461
Lsi08G007710CmaCh05G009640Cucurbita maxima (Rimu)cmalsiB738
Lsi08G007710CmaCh12G006920Cucurbita maxima (Rimu)cmalsiB190
Lsi08G007710CmoCh12G006270Cucurbita moschata (Rifu)cmolsiB180
Lsi08G007710CmoCh01G020920Cucurbita moschata (Rifu)cmolsiB446
Lsi08G007710CmoCh05G009830Cucurbita moschata (Rifu)cmolsiB729
Lsi08G007710Cla021916Watermelon (97103) v1lsiwmB465
Lsi08G007710MELO3C026520Melon (DHL92) v3.5.1lsimeB470
Lsi08G007710MELO3C017052Melon (DHL92) v3.5.1lsimeB487
Lsi08G007710ClCG08G009210Watermelon (Charleston Gray)lsiwcgB438
Lsi08G007710MELO3C026521.2Melon (DHL92) v3.6.1lsimedB490
Lsi08G007710MELO3C017052.2Melon (DHL92) v3.6.1lsimedB506
Lsi08G007710Cla97C08G152050Watermelon (97103) v2lsiwmbB444
Lsi08G007710Bhi04G000958Wax gourdlsiwgoB598
Lsi08G007710Cp4.1LG11g07710Cucurbita pepo (Zucchini)cpelsiB099
Lsi08G007710Cp4.1LG07g05720Cucurbita pepo (Zucchini)cpelsiB692
Lsi08G007710CsGy4G025500Cucumber (Gy14) v2cgyblsiB292
Lsi08G007710CsGy6G017960Cucumber (Gy14) v2cgyblsiB437
Lsi08G007710Carg21351Silver-seed gourdcarlsiB326
Lsi08G007710Carg21892Silver-seed gourdcarlsiB188
Lsi08G007710CsaV3_6G031350Cucumber (Chinese Long) v3cuclsiB500
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G007710Silver-seed gourdcarlsiB120
Lsi08G007710Silver-seed gourdcarlsiB318