Cp4.1LG11g07710 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g07710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	NAC domain protein,
Location	Cp4.1LG11 : 6287183 .. 6290375 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAACCAATCGTCCTGAAAAGTTGAAATAATTGTAATAAAGTGTTTGTCTTCTCCAACTTCTTCATCATGTTCTAAGTTTCAAAGCTTTTAAGCTCTTAAAATTCTCTTTATTATTTCCCAATAACTCATATCTCTCTCTACAAAATGTTTGGAATTGAAGAAGTTATTGATGAACTAAATGGAGAAGAAGCTGATAATGCTAAGGAAAGGCATAGATTATTGCCACCAGGCTTTAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAGGTCTTTAAACCTTCAAATTTTCATGGTGTCAATATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGGTACTCGTAATTTCTTTACAATCTTCTCGCTCGGGATTCACTCTCGAATCGAAAGTATCATGTCGTGTAAGCTTACCCTATTGAAATAATCGTGAAAGTAATAATCGCATGAAACTCGTTTTCTAGGGTTTGTTTGGTTTGTGTTTCTGTTTGAGTCTGTGAGTCAATAAGCTTGACTTGTTTAAATCCGAACATTAAGCATCATGTTAGAATCGTGATATGTAGTAGCCGTGCATTGAGAAGTTATTGATCGTAGAGTATTTCTAAGAGAAGTTAGTGGAACATTTTTTAATATTTCTATGAGAATAATTGTCATGATTTTGTTGGTTTAAATAGTTGTACAATTTTTTTTGTGGGTGTTTTGTTCTACTTCGATGATTTGTTTTGGTGTACTTAGATCGATAGTGAATGATCAAGAAAGGAAAACCCAACGAGGACAATATCAGCTAGCGGTGGGCTTGAGCTGTTACAAACGGTATTAGAGCTAGACACCGGGTGGTGTACCAGCTAGGACACTGTGCCTCCAAGGGGGGTGGATTGTGAGATCCCACGTCGGTTGGAGAGGAGAACAAAACATTCCTTATAACGGGATGAAAACCACTCCCTAGTAAATGCGTTTTAAAAACATTGAAGAAAGTCGAGAAAAGACAATATCTGCTAGCAGTGGGCTTAGACTTCTTCAAAGATTCATTTTTAATGTGTTTTCAAATGAATTGTAGCGATTTTTTTTTTTCATTCGACCCAAAATCTTAGATTGATGAGTTATATGATCGAATATTCGATCATTAGTTCGTATAAATGATGATTATAATGATTTTGTTCTTCAGATGAGGCAAAGATGGGAGAGAAAGAATGGTATTTCTTCAGCTTAAGAGTGAGGAAGTATCCGACAGGATTAAGAACCAACAGAGCCACAGTGGCTGGTTACTGGAAAGCCACAGGGAAAGACAGGCAAATTCACAGTAGTTCCAATGGAGTGAAGCTTGGAACAAAGAAAACTCTCGTGTTCTACAAAGGAGGAGCTCCAAGAGGCACTAAAACCAAGTGGGTTATGCATGAATATCGTCTCCACTCTGATCTTGCTTCCCCTAATGCCTGCAAGGTTCGTATTTGTTTCTTTCAAGCTAGATCCTATATTATTTGGAGAGGAGAACGAAACATTCTTTATACGGGTGTGGAAACCTCTCTTTAACAAACGCGTTTTAAAAATCTTGAGAGGACAATATCTACTAGTGGTGGGTTTAGGCTGTTACAAATGGTATCAAAGCCAGACACTGGACGGTGTGTCAGTGAGGACGCTGGGCATCGAATGGGGTGGATTGTGAGATCTCACATCAGTTGTAGAACGAAACGTTTTTATAAGGGTGTGAAAACCTCTTATTAGCAAAAGTGTTTTAAAAATCTTGAGAAAAGTCTGAAAGGGAAAGCTCAAAGCCGACAATATTGGCTAGATGTGGGCTTAAACTATTACAAATGATATTAGAGTAAATTTTGATGGAAGTCCGAAAGGAAAAGCCCACAATATCAGCTAGCTGTGGGCTTAATGGTTACAAATAGTATCAGAGCAAATCTTGAAAGAAACCGGAAAAGAAAAGCCCAAAGAGGACAATATGTGCTAGTGGTGAGCTTGAATTTTTACAAATAGTATCAGAGTCCGACTTCGGGCGGTGTGTCGGTGAAGACACTGGCCCCAAATGAGGTGGATTATGAGATCCCACATCGGTTGGAGAGAAAAACGAAACATTCTTATAAAGACGTCTCCTTAGAATACGTATTTTAAAAATTTTGAGGGAAGCGTGAAAGGGAAAACTCAAATCGGACAATATTTGCTAGCACTAGGCTTCACCTGTTACAAATGGTTTCAGAGCCATACACCAAGCCGTATGAGAGCAAGGATGGTAGCCACTAAGCTTGGACGGTTACAAATGGTATCAGAAGTGTACCAGCAAGAATGCTGGCCCGAAGAAGTAGATTGTAAATTCTTACGTCAATTGGAGAGAGAACAAGTACCAACAAGGAGGCTAGGCCCGAAAGGAGATGGACGAAGAGAACGGAACATTCTTAATCTTTTTAAGTGTCAAAATTTTGCTAATTTTATGTGTGATTTGATGCAGGATGAATGGGTTCTATGCAGAATAATTCACAAATCAGGAGAGAAGACAAAACCAAGATCCTTCCAACAACAACAAACATGTCACCAAGAATCATCTCCCTTGTCGGTCCCCTCTCCCATTTCTCCGCCGCCATTACTACTCGACACATCTCAAACCATAGACCATAACAACATCCGCCTCCAAGCAGCTCTACACAACCTTCACCGCCATGAAAATGGCCTCGACAGCTTCAACATGAACAACCCACATTTCATGTTCCAACCAAACCCCTTTCCATTTGGCTTAAATCTCGACACCCATTTCTGCCCGCCGTCAATTCAGGGGACCAACACCGACTTTCATGGCCATTTTAACCCACAGTTGTTGTTCGAAGGCGGCGGAGGAGGTAGTCGGGAGGCGTCGAGCTTTGCTGTGGATGGTGGCGCGTTGGTTGATGTGGCTGCTTATGCTGGTGGTCGTGGTGAGTTGGATGAGAATTGGAGCGGAGGGAGGTGATGAGATGTTTGCGTTAGATTATAATTGTTATTCTCCACCTGTATGGATATGGAACGATACAACCACGAAATGTTTACGAAATGGTTAGGATATGGAACGATATTTGTACGGATCCCCAAGCATTTTTGCTTCGTGGTGTTGGATGATGGTCGAAAATGGATGTCTACTACAATAATATCTACTTGGAACTTAGCTTAATTTATGACATTTTCGTGGGA

mRNA sequence

CACAACCAATCGTCCTGAAAAGTTGAAATAATTGTAATAAAGTGTTTGTCTTCTCCAACTTCTTCATCATGTTCTAAGTTTCAAAGCTTTTAAGCTCTTAAAATTCTCTTTATTATTTCCCAATAACTCATATCTCTCTCTACAAAATGTTTGGAATTGAAGAAGTTATTGATGAACTAAATGGAGAAGAAGCTGATAATGCTAAGGAAAGGCATAGATTATTGCCACCAGGCTTTAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAGGTCTTTAAACCTTCAAATTTTCATGGTGTCAATATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGATGAGGCAAAGATGGGAGAGAAAGAATGGTATTTCTTCAGCTTAAGAGTGAGGAAGTATCCGACAGGATTAAGAACCAACAGAGCCACAGTGGCTGGTTACTGGAAAGCCACAGGGAAAGACAGGCAAATTCACAGTAGTTCCAATGGAGTGAAGCTTGGAACAAAGAAAACTCTCGTGTTCTACAAAGGAGGAGCTCCAAGAGGCACTAAAACCAAGTGGGATGAATGGGTTCTATGCAGAATAATTCACAAATCAGGAGAGAAGACAAAACCAAGATCCTTCCAACAACAACAAACATGTCACCAAGAATCATCTCCCTTGTCGGTCCCCTCTCCCATTTCTCCGCCGCCATTACTACTCGACACATCTCAAACCATAGACCATAACAACATCCGCCTCCAAGCAGCTCTACACAACCTTCACCGCCATGAAAATGGCCTCGACAGCTTCAACATGAACAACCCACATTTCATGTTCCAACCAAACCCCTTTCCATTTGGCTTAAATCTCGACACCCATTTCTGCCCGCCGTCAATTCAGGGGACCAACACCGACTTTCATGGCCATTTTAACCCACAGTTGTTGTTCGAAGGCGGCGGAGGAGGTAGTCGGGAGGCGTCGAGCTTTGCTGTGGATGGTGGCGCGTTGGTTGATGTGGCTGCTTATGCTGGTGGTCGTGGTGAGTTGGATGAGAATTGGAGCGGAGGGAGGTGATGAGATGTTTGCGTTAGATTATAATTGTTATTCTCCACCTGTATGGATATGGAACGATACAACCACGAAATGTTTACGAAATGGTTAGGATATGGAACGATATTTGTACGGATCCCCAAGCATTTTTGCTTCGTGGTGTTGGATGATGGTCGAAAATGGATGTCTACTACAATAATATCTACTTGGAACTTAGCTTAATTTATGACATTTTCGTGGGA

Coding sequence (CDS)

ATGTTTGGAATTGAAGAAGTTATTGATGAACTAAATGGAGAAGAAGCTGATAATGCTAAGGAAAGGCATAGATTATTGCCACCAGGCTTTAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAGGTCTTTAAACCTTCAAATTTTCATGGTGTCAATATTGCTGAAGTTGACCTCAATAGATGTGAGCCTTGGGAGCTTCCAGATGAGGCAAAGATGGGAGAGAAAGAATGGTATTTCTTCAGCTTAAGAGTGAGGAAGTATCCGACAGGATTAAGAACCAACAGAGCCACAGTGGCTGGTTACTGGAAAGCCACAGGGAAAGACAGGCAAATTCACAGTAGTTCCAATGGAGTGAAGCTTGGAACAAAGAAAACTCTCGTGTTCTACAAAGGAGGAGCTCCAAGAGGCACTAAAACCAAGTGGGATGAATGGGTTCTATGCAGAATAATTCACAAATCAGGAGAGAAGACAAAACCAAGATCCTTCCAACAACAACAAACATGTCACCAAGAATCATCTCCCTTGTCGGTCCCCTCTCCCATTTCTCCGCCGCCATTACTACTCGACACATCTCAAACCATAGACCATAACAACATCCGCCTCCAAGCAGCTCTACACAACCTTCACCGCCATGAAAATGGCCTCGACAGCTTCAACATGAACAACCCACATTTCATGTTCCAACCAAACCCCTTTCCATTTGGCTTAAATCTCGACACCCATTTCTGCCCGCCGTCAATTCAGGGGACCAACACCGACTTTCATGGCCATTTTAACCCACAGTTGTTGTTCGAAGGCGGCGGAGGAGGTAGTCGGGAGGCGTCGAGCTTTGCTGTGGATGGTGGCGCGTTGGTTGATGTGGCTGCTTATGCTGGTGGTCGTGGTGAGTTGGATGAGAATTGGAGCGGAGGGAGGTGA

Protein sequence

MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKWDEWVLCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLDSFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQGTNTDFHGHFNPQLLFEGGGGGSREASSFAVDGGALVDVAAYAGGRGELDENWSGGR

Homology

[Close]

BLAST of Cp4.1LG11g07710 vs. Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.8e-58
Identity = 108/180 (60.00%), Postives = 130/180 (72.22%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +E+V+ EL GEE +      R LPPGFRFHPTDEELI FYLASK+F      G++I+
Sbjct: 2   MLAVEDVLSELAGEERNE-----RGLPPGFRFHPTDEELITFYLASKIFH-GGLSGIHIS 61

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELP+ AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWKATGKD+++ S 
Sbjct: 62  EVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSG 121

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 163
             G  +G KKTLVFYKG APRG KTKW                  +EWV+CR+ +K+G++
Sbjct: 122 GGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDR 175

[Close]

BLAST of Cp4.1LG11g07710 vs. Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 4.5e-49
Identity = 98/161 (60.87%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 21  ERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGE 80
           E   L+PPGFRFHPTDEELI +YL  KV   SNF    I++VDLN+ EPWELP++AKMGE
Sbjct: 15  EDESLMPPGFRFHPTDEELITYYLLKKVLD-SNFSCAAISQVDLNKSEPWELPEKAKMGE 74

Query: 81  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAP 140
           KEWYFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP
Sbjct: 75  KEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAP 134

Query: 141 RGTKTKWD---------------------EWVLCRIIHKSG 161
           +G K+ W                      EWVLC++  KSG
Sbjct: 135 KGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]

BLAST of Cp4.1LG11g07710 vs. Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.0e-48
Identity = 138/352 (39.20%), Postives = 168/352 (47.73%), Query Frame = 1


Query: 26  LPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYF 85
           LPPGFRFHPTDEELI  YL  KV     F    IAEVDLN+CEPW+LP  AKMGEKEWYF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGC-FSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 76

Query: 86  FSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKT 145
           FSLR RKYPTGLRTNRAT AGYWKATGKDR+I SS     +G KKTLVFYKG AP+G K+
Sbjct: 77  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 136

Query: 146 KW---------------------DEWVLCRIIHKS------------------------- 205
            W                     DEWV+ R+  K+                         
Sbjct: 137 NWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGT 196

Query: 206 --GEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLL--------LDTSQTIDHNNIRLQA 265
              +KTK  S   +    Q SS    PS +S PPLL         D+S + D  +     
Sbjct: 197 GPSKKTKVPSTISRNYQEQPSS----PSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTV 256

Query: 266 ALHNLHRHEN------------GLD--SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQG 308
               +  H +            GLD  SF+   P   F  +PFP  ++ +      S Q 
Sbjct: 257 TASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSRNV-----STQS 316

[Close]

BLAST of Cp4.1LG11g07710 vs. Swiss-Prot
Match: NAC92_ARATH (NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.7e-46
Identity = 104/200 (52.00%), Postives = 119/200 (59.50%), Query Frame = 1


Query: 21  ERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGE 80
           E H  LPPGFRFHPTDEELI  YL  KVF  + F    I EVDLN+ EPW+LP +AKMGE
Sbjct: 15  EEHIDLPPGFRFHPTDEELITHYLKPKVFN-TFFSATAIGEVDLNKIEPWDLPWKAKMGE 74

Query: 81  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAP 140
           KEWYFF +R RKYPTGLRTNRAT AGYWKATGKD++I    + V  G KKTLVFYKG AP
Sbjct: 75  KEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLV--GMKKTLVFYKGRAP 134

Query: 141 RGTKTKW---------------------DEWVLCRIIHKSGEKTK-PRSFQQQQTCHQES 199
           +G KT W                     +EWV+CR+  K  + TK P S         E 
Sbjct: 135 KGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTKVPMSMLDPHINRMEP 194

[Close]

BLAST of Cp4.1LG11g07710 vs. Swiss-Prot
Match: NAC79_ARATH (NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.6e-44
Identity = 94/164 (57.32%), Postives = 107/164 (65.24%), Query Frame = 1


Query: 26  LPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYF 85
           LPPGFRFHPTDEELI  YL  KV     F    I EVDLN+ EPWELP +AK+GEKEWYF
Sbjct: 17  LPPGFRFHPTDEELITHYLHKKVLD-LGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYF 76

Query: 86  FSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKT 145
           F +R RKYPTGLRTNRAT AGYWKATGKD++I    + V  G KKTLVFY+G AP+G KT
Sbjct: 77  FCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKSLV--GMKKTLVFYRGRAPKGQKT 136

Query: 146 KW---------------------DEWVLCRIIHK-SGEKTKPRS 168
            W                     +EWV+CR+ HK +G K  P S
Sbjct: 137 NWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPIS 177

[Close]

BLAST of Cp4.1LG11g07710 vs. TrEMBL
Match: A0A0A0KFF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355380 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 2.0e-120
Identity = 237/347 (68.30%), Postives = 260/347 (74.93%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAK----------ERHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+    K          + HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWV 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                  DEWV
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEWV 180

Query: 181 LCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAAL 240
           LCRIIHKSGEK KP+S  Q+          +VPSPIS P LLL+ +Q+I+H NI+ Q  L
Sbjct: 181 LCRIIHKSGEKIKPKSSFQE----------TVPSPISLPSLLLNATQSINHINIQSQPPL 240

Query: 241 HNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHFN 300
           HN+  HENGL+SF +NNPHF+FQPN FPFGL N D H       PPSIQ T+T++H HFN
Sbjct: 241 HNIQHHENGLESFIINNPHFIFQPNLFPFGLNNHDPHLTTPPPPPPSIQMTDTNYHPHFN 300

Query: 301 PQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRG-ELDENWSGG 311
           P LL + GG  S++ASSF VD GG LVDVAAY G RG + DENWSGG
Sbjct: 301 PSLLLD-GGCDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGG 336

[Close]

BLAST of Cp4.1LG11g07710 vs. TrEMBL
Match: A0A0A0L1E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664400 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.5e-64
Identity = 139/229 (60.70%), Postives = 159/229 (69.43%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +E+++ ELNGEE +        LPPGFRFHPTDEELI FYLASKVFK S F GV IA
Sbjct: 1   MLTMEQILSELNGEELNEQG-----LPPGFRFHPTDEELITFYLASKVFKGS-FCGVEIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPD AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWKATGKDR+++S+
Sbjct: 61  EVDLNRCEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSA 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           SNG  LG KKTLVFYKG APRG KTKW                  +EWV+CRI HK+GE 
Sbjct: 121 SNGSLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGE- 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAAL 212
            K  S  Q QT   ES+  S  +  S PP LL+T+ T      + QAA+
Sbjct: 181 -KKNSMFQCQTYLLESALSSSTTSNSLPP-LLETNPTTTLVECQSQAAM 220

[Close]

BLAST of Cp4.1LG11g07710 vs. TrEMBL
Match: A0A0D2TMA2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G186000 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-63
Identity = 139/246 (56.50%), Postives = 160/246 (65.04%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +EE++ EL  EE +        LPPGFRFHPTDEEL+ FYLASKVF  S F GV IA
Sbjct: 1   MLAVEEILSELAEEEVNGHG-----LPPGFRFHPTDEELVTFYLASKVFHGS-FCGVEIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPD AKMGE+EWYFFSLR RKYP+GLRTNRAT AGYWKATGKDR+++S+
Sbjct: 61  EVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPSGLRTNRATGAGYWKATGKDREVYSA 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           S G  LG KKTLVFYKG APRG KTKW                  +EWV+CRI HK+ EK
Sbjct: 121 STGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSCRPSCKEEWVICRIFHKTSEK 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPI--SPPPLLLDTSQTIDHNNIRLQAALHN---LHRH 224
               +  Q       SS  +   P+  +P PLL   SQT+      +QA  HN   +HRH
Sbjct: 181 KNALAQGQSYVLAMSSSSTTFLPPLLETPTPLLKSESQTL------MQA--HNSFLIHRH 232

[Close]

BLAST of Cp4.1LG11g07710 vs. TrEMBL
Match: W6JAN5_GOSHI (NAC domain protein NAC28 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-63
Identity = 139/246 (56.50%), Postives = 160/246 (65.04%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +EE++ EL  EE +        LPPGFRFHPTDEEL+ FYLASKVF  S F GV IA
Sbjct: 1   MLAVEEILSELAEEEVNGHG-----LPPGFRFHPTDEELVTFYLASKVFHGS-FCGVEIA 60

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPD AKMGE+EWYFFSLR RKYP+GLRTNRAT AGYWKATGKDR+++S+
Sbjct: 61  EVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPSGLRTNRATGAGYWKATGKDREVYSA 120

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           S G  LG KKTLVFYKG APRG KTKW                  +EWV+CRI HK+ EK
Sbjct: 121 STGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSCRPSCKEEWVICRIFHKTSEK 180

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPI--SPPPLLLDTSQTIDHNNIRLQAALHN---LHRH 224
               +  Q       SS  +   P+  +P PLL   SQT+      +QA  HN   +HRH
Sbjct: 181 KNALAQGQSYVLAMSSSSTTFLPPLLETPTPLLKSESQTL------MQA--HNSFLIHRH 232

[Close]

BLAST of Cp4.1LG11g07710 vs. TrEMBL
Match: A0A061FGR2_THECC (NAC domain transcriptional regulator superfamily protein OS=Theobroma cacao GN=TCM_034835 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.9e-63
Identity = 151/283 (53.36%), Postives = 176/283 (62.19%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +EE++ EL GEE +        LPPGFRFHPTDEELI FYLASKVF  S F GV IA
Sbjct: 38  MLSVEELLSELAGEELNEQG-----LPPGFRFHPTDEELITFYLASKVFNGS-FCGVEIA 97

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELPD AKMGE+EWYFFSLR RKYPTGLRTNRAT AGYWKATGKDR+++S+
Sbjct: 98  EVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSA 157

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 180
           S+G  LG KKTLVFY+G APRG KTKW                  +EWV+CRI HK+GEK
Sbjct: 158 SSGALLGMKKTLVFYRGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKTGEK 217

Query: 181 TKPRSFQQQQTCHQESSPLSVPSPI--SPPPLLLDTSQTIDHNNIRLQAA-LHNLHRHEN 240
               +  Q       SSP S   P+  +P P L   SQT       +QA     +HR EN
Sbjct: 218 KTALAQGQSFILEVSSSPASSLPPLLETPTPFLESQSQT------PMQAQNSFVIHRQEN 277

Query: 241 GLDSFNMNNPHFMFQPNPFPF-GLNLDTHFC--PPSIQGTNTD 260
            L S  + NP  + Q   FP  GL +   F   P +I  + T+
Sbjct: 278 DLKS--LINP-VVSQTPLFPADGLQVQPSFSANPTTITSSTTN 305

[Close]

BLAST of Cp4.1LG11g07710 vs. TAIR10
Match: AT1G76420.1 (AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 227.6 bits (579), Expect = 1.0e-59
Identity = 108/180 (60.00%), Postives = 130/180 (72.22%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAKERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIA 60
           M  +E+V+ EL GEE +      R LPPGFRFHPTDEELI FYLASK+F      G++I+
Sbjct: 2   MLAVEDVLSELAGEERNE-----RGLPPGFRFHPTDEELITFYLASKIFH-GGLSGIHIS 61

Query: 61  EVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSS 120
           EVDLNRCEPWELP+ AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWKATGKD+++ S 
Sbjct: 62  EVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSG 121

Query: 121 SNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWVLCRIIHKSGEK 163
             G  +G KKTLVFYKG APRG KTKW                  +EWV+CR+ +K+G++
Sbjct: 122 GGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDR 175

[Close]

BLAST of Cp4.1LG11g07710 vs. TAIR10
Match: AT3G18400.1 (AT3G18400.1 NAC domain containing protein 58)

HSP 1 Score: 201.4 bits (511), Expect = 7.9e-52
Identity = 110/227 (48.46%), Postives = 134/227 (59.03%), Query Frame = 1


Query: 26  LPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYF 85
           LPPGFRFHPTDEELI  YL  KV     F G  + +VDLN+CEPW+LP +A MGEKEWYF
Sbjct: 5   LPPGFRFHPTDEELITHYLCRKV-SDIGFTGKAVVDVDLNKCEPWDLPAKASMGEKEWYF 64

Query: 86  FSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKT 145
           FS R RKYPTGLRTNRAT AGYWK TGKD++I+ S  GV +G KKTLVFYKG AP+G K+
Sbjct: 65  FSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRS--GVLVGMKKTLVFYKGRAPKGEKS 124

Query: 146 KW------------------DEWVLCRIIHKSGEKTKPRSFQQQQT-------CHQESSP 205
            W                  +EWV+CR+  KS    K +  Q Q +       C   SS 
Sbjct: 125 NWVMHEYRLESKQPFNPTNKEEWVVCRVFEKSTAAKKAQEQQPQSSQPSFGSPCDANSSM 184

Query: 206 LSVPSPISPPPLLLDTSQTIDHNNIRLQAALHNLHRHENGLDSFNMN 228
            +    I   P L   S TID+NN   Q +  N++  +N   +  +N
Sbjct: 185 ANEFEDIDELPNLNSNSSTIDYNNHIHQYSQRNVYSEDNTTSTAGLN 228

[Close]

BLAST of Cp4.1LG11g07710 vs. TAIR10
Match: AT2G24430.1 (AT2G24430.1 NAC domain containing protein 38)

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-50
Identity = 96/178 (53.93%), Postives = 117/178 (65.73%), Query Frame = 1


Query: 20  KERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMG 79
           K+    LPPGFRFHPTDEELI++YL +K+    NF G  IA+VDLN+ EPWELP++AKMG
Sbjct: 10  KKEEEALPPGFRFHPTDEELISYYLVNKI-ADQNFTGKAIADVDLNKSEPWELPEKAKMG 69

Query: 80  EKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGA 139
            KEWYFFSLR RKYPTG+RTNRAT  GYWK TGKD++I +S+    +G KKTLVFY+G A
Sbjct: 70  GKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRA 129

Query: 140 PRGTKTKW------------------DEWVLCRIIHKSGEKTKPRSFQQQQTCHQESS 180
           PRG KT W                  DEWV+CR+  K+    K  S     T H  ++
Sbjct: 130 PRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKYISTSSSSTSHHHNN 186

[Close]

BLAST of Cp4.1LG11g07710 vs. TAIR10
Match: AT3G15170.1 (AT3G15170.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-50
Identity = 98/161 (60.87%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 21  ERHRLLPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGE 80
           E   L+PPGFRFHPTDEELI +YL  KV   SNF    I++VDLN+ EPWELP++AKMGE
Sbjct: 15  EDESLMPPGFRFHPTDEELITYYLLKKVLD-SNFSCAAISQVDLNKSEPWELPEKAKMGE 74

Query: 81  KEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAP 140
           KEWYFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP
Sbjct: 75  KEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAP 134

Query: 141 RGTKTKWD---------------------EWVLCRIIHKSG 161
           +G K+ W                      EWVLC++  KSG
Sbjct: 135 KGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]

BLAST of Cp4.1LG11g07710 vs. TAIR10
Match: AT5G53950.1 (AT5G53950.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 193.0 bits (489), Expect = 2.8e-49
Identity = 138/352 (39.20%), Postives = 168/352 (47.73%), Query Frame = 1


Query: 26  LPPGFRFHPTDEELIAFYLASKVFKPSNFHGVNIAEVDLNRCEPWELPDEAKMGEKEWYF 85
           LPPGFRFHPTDEELI  YL  KV     F    IAEVDLN+CEPW+LP  AKMGEKEWYF
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGC-FSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYF 76

Query: 86  FSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKT 145
           FSLR RKYPTGLRTNRAT AGYWKATGKDR+I SS     +G KKTLVFYKG AP+G K+
Sbjct: 77  FSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKS 136

Query: 146 KW---------------------DEWVLCRIIHKS------------------------- 205
            W                     DEWV+ R+  K+                         
Sbjct: 137 NWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKTTLASTGAVSEGGGGGGATVSVSSGT 196

Query: 206 --GEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLL--------LDTSQTIDHNNIRLQA 265
              +KTK  S   +    Q SS    PS +S PPLL         D+S + D  +     
Sbjct: 197 GPSKKTKVPSTISRNYQEQPSS----PSSVSLPPLLDPTTTLGYTDSSCSYDSRSTNTTV 256

Query: 266 ALHNLHRHEN------------GLD--SFNMNNPHFMFQPNPFPFGLNLDTHFCPPSIQG 308
               +  H +            GLD  SF+   P   F  +PFP  ++ +      S Q 
Sbjct: 257 TASAITEHVSCFSTVPTTTTALGLDVNSFSRLPPPLGFDFDPFPRFVSRNV-----STQS 316

[Close]

BLAST of Cp4.1LG11g07710 vs. NCBI nr
Match: gi|659129734|ref|XP_008464817.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo])

HSP 1 Score: 445.3 bits (1144), Expect = 8.9e-122
Identity = 239/347 (68.88%), Postives = 262/347 (75.50%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEE-----ADNAKE-----RHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+     +DN KE      HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWV 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                  DEWV
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEWV 180

Query: 181 LCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAAL 240
           LCRIIHKSGEK KP+S   Q+T         +PSPIS P LLL+ +Q+I+HNNI+ Q   
Sbjct: 181 LCRIIHKSGEKIKPKSSSFQET---------IPSPISLPSLLLNATQSINHNNIQFQPPP 240

Query: 241 HNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHFN 300
           HN+  HENGL+SF +NNPHF+FQPN F FGL N DTH       PPSIQ T+T++H HFN
Sbjct: 241 HNIQHHENGLESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHFN 300

Query: 301 PQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRG-ELDENWSGG 311
           P LL + GG  S++ASSF VD GG LVDVA Y G RG + DENWSGG
Sbjct: 301 PSLLLD-GGCDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGG 337

[Close]

BLAST of Cp4.1LG11g07710 vs. NCBI nr
Match: gi|659129732|ref|XP_008464816.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis melo])

HSP 1 Score: 444.9 bits (1143), Expect = 1.2e-121
Identity = 239/348 (68.68%), Postives = 262/348 (75.29%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEE-----ADNAKE-----RHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+     +DN KE      HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW-------------------DEW 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                   DEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAA 240
           VLCRIIHKSGEK KP+S   Q+T         +PSPIS P LLL+ +Q+I+HNNI+ Q  
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQET---------IPSPISLPSLLLNATQSINHNNIQFQPP 240

Query: 241 LHNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHF 300
            HN+  HENGL+SF +NNPHF+FQPN F FGL N DTH       PPSIQ T+T++H HF
Sbjct: 241 PHNIQHHENGLESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHF 300

Query: 301 NPQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRG-ELDENWSGG 311
           NP LL + GG  S++ASSF VD GG LVDVA Y G RG + DENWSGG
Sbjct: 301 NPSLLLD-GGCDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGG 338

[Close]

BLAST of Cp4.1LG11g07710 vs. NCBI nr
Match: gi|449453093|ref|XP_004144293.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 440.3 bits (1131), Expect = 2.9e-120
Identity = 237/347 (68.30%), Postives = 260/347 (74.93%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAK----------ERHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+    K          + HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW------------------DEWV 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                  DEWV
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKDEWV 180

Query: 181 LCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAAL 240
           LCRIIHKSGEK KP+S  Q+          +VPSPIS P LLL+ +Q+I+H NI+ Q  L
Sbjct: 181 LCRIIHKSGEKIKPKSSFQE----------TVPSPISLPSLLLNATQSINHINIQSQPPL 240

Query: 241 HNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHFN 300
           HN+  HENGL+SF +NNPHF+FQPN FPFGL N D H       PPSIQ T+T++H HFN
Sbjct: 241 HNIQHHENGLESFIINNPHFIFQPNLFPFGLNNHDPHLTTPPPPPPSIQMTDTNYHPHFN 300

Query: 301 PQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRG-ELDENWSGG 311
           P LL + GG  S++ASSF VD GG LVDVAAY G RG + DENWSGG
Sbjct: 301 PSLLLD-GGCDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGG 336

[Close]

BLAST of Cp4.1LG11g07710 vs. NCBI nr
Match: gi|778715024|ref|XP_011657330.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 3.7e-120
Identity = 237/348 (68.10%), Postives = 260/348 (74.71%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEEADNAK----------ERHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+    K          + HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP+EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW-------------------DEW 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                   DEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAA 240
           VLCRIIHKSGEK KP+S  Q+          +VPSPIS P LLL+ +Q+I+H NI+ Q  
Sbjct: 181 VLCRIIHKSGEKIKPKSSFQE----------TVPSPISLPSLLLNATQSINHINIQSQPP 240

Query: 241 LHNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHF 300
           LHN+  HENGL+SF +NNPHF+FQPN FPFGL N D H       PPSIQ T+T++H HF
Sbjct: 241 LHNIQHHENGLESFIINNPHFIFQPNLFPFGLNNHDPHLTTPPPPPPSIQMTDTNYHPHF 300

Query: 301 NPQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRG-ELDENWSGG 311
           NP LL + GG  S++ASSF VD GG LVDVAAY G RG + DENWSGG
Sbjct: 301 NPSLLLD-GGCDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGG 337

[Close]

BLAST of Cp4.1LG11g07710 vs. NCBI nr
Match: gi|659129736|ref|XP_008464818.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 4.9e-120
Identity = 239/348 (68.68%), Postives = 261/348 (75.00%), Query Frame = 1


Query: 1   MFGIEEVIDELNGEE-----ADNAKE-----RHRLLPPGFRFHPTDEELIAFYLASKVFK 60
           MFGIEEVI ELN E+     +DN KE      HRLLPPG+RFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFH-GVNIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNF  GVNIAEVDLNRCEPWELP EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELP-EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSSNGVKLGTKKTLVFYKGGAPRGTKTKW-------------------DEW 180
           ATGKDRQIHSS NGVKLGTKKTLVFYKGGAPRG KTKW                   DEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKTKPRSFQQQQTCHQESSPLSVPSPISPPPLLLDTSQTIDHNNIRLQAA 240
           VLCRIIHKSGEK KP+S   Q+T         +PSPIS P LLL+ +Q+I+HNNI+ Q  
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQET---------IPSPISLPSLLLNATQSINHNNIQFQPP 240

Query: 241 LHNLHRHENGLDSFNMNNPHFMFQPNPFPFGL-NLDTHFC-----PPSIQGTNTDFHGHF 300
            HN+  HENGL+SF +NNPHF+FQPN F FGL N DTH       PPSIQ T+T++H HF
Sbjct: 241 PHNIQHHENGLESFIINNPHFIFQPNLFSFGLHNPDTHLSTPPPPPPSIQMTDTNYHPHF 300

Query: 301 NPQLLFEGGGGGSREASSFAVD-GGALVDVAAYAGGRG-ELDENWSGG 311
           NP LL + GG  S++ASSF VD GG LVDVA Y G RG + DENWSGG
Sbjct: 301 NPSLLLD-GGCDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGG 337

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g07710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC31_ARATH	1.8e-58	60.00	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1	[more]
NAC54_ARATH	4.5e-49	60.87	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1	[more]
NAC98_ARATH	5.0e-48	39.20	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1	[more]
NAC92_ARATH	2.7e-46	52.00	NAC domain-containing protein 92 OS=Arabidopsis thaliana GN=NAC92 PE=1 SV=1	[more]
NAC79_ARATH	2.6e-44	57.32	NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1	[more]

BLAST of Cp4.1LG11g07710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFF1_CUCSA	2.0e-120	68.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355380 PE=4 SV=1	[more]
A0A0A0L1E7_CUCSA	3.5e-64	60.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664400 PE=4 SV=1	[more]
A0A0D2TMA2_GOSRA	2.2e-63	56.50	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G186000 PE=4 SV=1	[more]
W6JAN5_GOSHI	2.2e-63	56.50	NAC domain protein NAC28 OS=Gossypium hirsutum PE=2 SV=1	[more]
A0A061FGR2_THECC	2.9e-63	53.36	NAC domain transcriptional regulator superfamily protein OS=Theobroma cacao GN=T...	[more]

BLAST of Cp4.1LG11g07710 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76420.1	1.0e-59	60.00	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT3G18400.1	7.9e-52	48.46	NAC domain containing protein 58	[more]
AT2G24430.1	1.5e-50	53.93	NAC domain containing protein 38	[more]
AT3G15170.1	2.5e-50	60.87	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT5G53950.1	2.8e-49	39.20	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]

BLAST of Cp4.1LG11g07710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129734\|ref\|XP_008464817.1\|	8.9e-122	68.88	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis melo]	[more]
gi\|659129732\|ref\|XP_008464816.1\|	1.2e-121	68.68	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis melo]	[more]
gi\|449453093\|ref\|XP_004144293.1\|	2.9e-120	68.30	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis sativus]	[more]
gi\|778715024\|ref\|XP_011657330.1\|	3.7e-120	68.10	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis sativus]	[more]
gi\|659129736\|ref\|XP_008464818.1\|	4.9e-120	68.68	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009887	animal organ morphogenesis
biological_process	GO:0048507	meristem development
biological_process	GO:0007389	pattern specification process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0010014	meristem initiation
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0010199	organ boundary specification between lateral organs and the meristem
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g07710.1	Cp4.1LG11g07710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 27..147 score: 2.6
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 26..170 score: 44
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 25..158 score: 1.16
None	No IPR available	unknown	Coil	Coil	coord: 4..24 scor
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 4..236 score: 1.3E
None	No IPR available	PANTHER	PTHR31744:SF17	PROTEIN CUP-SHAPED COTYLEDON 3	coord: 4..236 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g07710	Cucsa.077390	Cucumber (Gy14) v1	cgycpeB0126
Cp4.1LG11g07710	CmaCh12G006920	Cucurbita maxima (Rimu)	cmacpeB181
Cp4.1LG11g07710	CmaCh05G009650	Cucurbita maxima (Rimu)	cmacpeB767
Cp4.1LG11g07710	CmoCh05G009840	Cucurbita moschata (Rifu)	cmocpeB721
Cp4.1LG11g07710	CmoCh12G006270	Cucurbita moschata (Rifu)	cmocpeB155
Cp4.1LG11g07710	Cla021917	Watermelon (97103) v1	cpewmB100
Cp4.1LG11g07710	Csa6G355380	Cucumber (Chinese Long) v2	cpecuB120
Cp4.1LG11g07710	MELO3C026521	Melon (DHL92) v3.5.1	cpemeB090
Cp4.1LG11g07710	ClCG08G009220	Watermelon (Charleston Gray)	cpewcgB123
Cp4.1LG11g07710	CSPI06G18460	Wild cucumber (PI 183967)	cpecpiB118
Cp4.1LG11g07710	Lsi08G007710	Bottle gourd (USVL1VR-Ls)	cpelsiB099
Cp4.1LG11g07710	MELO3C026521.2	Melon (DHL92) v3.6.1	cpemedB113
Cp4.1LG11g07710	CsaV3_6G031350	Cucumber (Chinese Long) v3	cpecucB0132
Cp4.1LG11g07710	Bhi04G000958	Wax gourd	cpewgoB0139
Cp4.1LG11g07710	CsGy6G017960	Cucumber (Gy14) v2	cgybcpeB715
Cp4.1LG11g07710	Carg21351	Silver-seed gourd	carcpeB0497
Cp4.1LG11g07710	Carg21892	Silver-seed gourd	carcpeB0297

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG11g07710	Cp4.1LG02g08680	Cucurbita pepo (Zucchini)	cpecpeB124
Cp4.1LG11g07710	Cp4.1LG07g05720	Cucurbita pepo (Zucchini)	cpecpeB149

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g07710	Silver-seed gourd	carcpeB0191
Cp4.1LG11g07710	Silver-seed gourd	carcpeB0483