CmaCh05G009640 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh05G009640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	HSP20-like chaperones superfamily protein
Location	Cma_Chr05 : 7781704 .. 7782514 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGCTCCTTGTTTTGCCTTATTTTTCTATCATTCTAACATTTGCATAGATCCCATCCTGATTATACCTCTGGAATGTTAATCCCGGACCGATCCATTTAGAGCGATAACTTGTTGGTCAAATCTCTAGGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAGTGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTTACGATTTCTTTTAAGCTGCCTGGACCAGTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTGAGGAGTATGATGGAGAGAGGTATCTGGTTTTGCTGTCTCCTTTTGTTCTTCATTTCCAGTCACTTGAATTACCCAAAGACACAAAAATGATTATAGTTTTCTATGTTAACTATTTCTTTTCATATGAAGTAGGGTTTTTAAATCACTTGCAATGTAATTTAATCCATAGTTTTGCCCATTTAAAGTCTAGCCTTTTTTACTTGATCGTAGCTTTTGTCTTGTTATTTTACTTTCAATTCTG

mRNA sequence

ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAGTGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTTACGATTTCTTTTAAGCTGCCTGGACCAGTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTGAGGAGTATGATGGAGAGAGGTATCTGGTTTTGCTGTCTCCTTTTGTTCTTCATTTCCAGTCACTTGAATTACCCAAAGACACAAAAATGATTATAGTTTTCTATGTTAACTATTTCTTTTCATATGAAGTAGGGTTTTTAAATCACTTGCAATGTAATTTAATCCATAGTTTTGCCCATTTAAAGTCTAGCCTTTTTTACTTGATCGTAGCTTTTGTCTTGTTATTTTACTTTCAATTCTG

Coding sequence (CDS)

ATGGACATGGAAGGCCATGGCGATCAGACGAGGCTCAAACCATCAGTTATTTTAACTGGAACAGCCAATGAAGGTAGCTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTCCGCGTTGCAATGCCTGGTGTACGAAAGGATCCAAGTAAGGTAAAATTTGAGATCAAAAGGGATGGTAAGGTTCAGATTGAAGGAGTGATGGCAGGTCCAGGCCTCTTAAAAGAATCATCAGCTATGTACGAGATGAAAGTCCAGCAACTGTGTCCTCCGGGACCTCTTACGATTTCTTTTAAGCTGCCTGGACCAGTCGATCCACGGTTGTCGTCTCCTAGTTTCCGGGCTGATGGCATTCTGGAAGTGGTGGTTATGAAGTCTAAAGCACCTCCAACAGTGTCTGATTCCTACCCACCATTGTGA

Protein sequence

MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRADGILEVVVMKSKAPPTVSDSYPPL

Homology

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BLAST of CmaCh05G009640 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.7e-30
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1


Query: 13  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIE 72
           +PSV+ TGTA++ + G  +G+VDIGV++ AY F+VA+PGVRKD  +   EI+ DGKV +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 73  G-VMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRADGILEVVVM 132
           G    G   +K  S ++EM +++LCPPGP  + F LPGPVDPRL SP+FR+DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 133 KSK 135
           + K
Sbjct: 459 RHK 461

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BLAST of CmaCh05G009640 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.4e-22
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 10  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKV 69
           ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVA+PGV +D  +   EI+ DGK+
Sbjct: 78  SQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKI 137

Query: 70  QIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRADGILEV 129
            I+G    G   + + + +++M  Q LCPPG  TI+F+LPGPV     + +F +DG+LE 
Sbjct: 138 MIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEG 197

Query: 130 VVMK 133
           VV K
Sbjct: 198 VVKK 201

[Close]

BLAST of CmaCh05G009640 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 1


Query: 5   GHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIK 64
           G       KP V      +E   G  +GL+DIG  + AYLFRV++PGV++D      E++
Sbjct: 219 GEESDVAAKPEV-----KSEAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVE 278

Query: 65  RDGKVQIEGVMAGPGL-LKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRAD 124
            +GKV + GV    G  +K  S ++EM+ + LCPPG  ++SF+LPGPV P   S +F  D
Sbjct: 279 DNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTD 338

Query: 125 GILEVVVMKSKAPPTV 140
           GILE VVMK+    TV
Sbjct: 339 GILEGVVMKNLQKQTV 349

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BLAST of CmaCh05G009640 vs. TrEMBL
Match: A0A0A0KDF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355370 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 2.3e-66
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 1


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFE 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 63  IKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRA 122
           IK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T+SFKLPGPVDPRLSSPSFR 
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 123 DGILEVVVMKSKAPPTVSDSYPPL 147
           DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPL 144

[Close]

BLAST of CmaCh05G009640 vs. TrEMBL
Match: W9QWS3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024812 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.1e-47
Identity = 96/138 (69.57%), Postives = 112/138 (81.16%), Query Frame = 1


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           M+ +      +LKPSV+ TGTA EGS GPP+GLVD+G SEGAYLFRVA+PGV+KD  K+K
Sbjct: 1   MEGQKFAGNPQLKPSVVFTGTAKEGSVGPPVGLVDVGESEGAYLFRVALPGVKKDQCKIK 60

Query: 61  FEIKRDGKVQIEGVM-AGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPS 120
            EI+RDG+V IEGVM  G G L++SS +Y+MKVQQLCPPGP TISF LPGPVDPRL SPS
Sbjct: 61  CEIQRDGRVHIEGVMTGGVGPLRDSSTVYQMKVQQLCPPGPFTISFSLPGPVDPRLFSPS 120

Query: 121 FRADGILEVVVMKSKAPP 138
           FR DGILEVVVMK + PP
Sbjct: 121 FRPDGILEVVVMKHRKPP 138

[Close]

BLAST of CmaCh05G009640 vs. TrEMBL
Match: B9GJA0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s24980g PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.4e-44
Identity = 90/147 (61.22%), Postives = 116/147 (78.91%), Query Frame = 1


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           MD     +Q +LKP VIL+GTA EGS+GPPIGLVDIGVSE AYLFRVA+PG+R++ S +K
Sbjct: 1   MDACDSANQPKLKPLVILSGTAKEGSAGPPIGLVDIGVSENAYLFRVALPGIRRNESNLK 60

Query: 61  FEIKRDGKVQIEGVMA-GPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPS 120
            +I+ +G V I+GV+    G+LK+SS++++M+VQQLCPPGP TISFKLPGPVDPRL  P+
Sbjct: 61  CDIQHNGTVHIKGVVTVDAGMLKDSSSVFQMRVQQLCPPGPFTISFKLPGPVDPRLFCPN 120

Query: 121 FRADGILEVVVMKSKAPPTVSDSYPPL 147
           FR DG+LEV VMK + P   ++  PPL
Sbjct: 121 FRNDGVLEVAVMKYRPPSAPTNGVPPL 147

[Close]

BLAST of CmaCh05G009640 vs. TrEMBL
Match: B9R8S9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1602000 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43
Identity = 89/137 (64.96%), Postives = 108/137 (78.83%), Query Frame = 1


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           MD    G+  RLKP ++LTGTANEGS+GPPIGL DIGVSE AYLFRVA+PG+RK+   VK
Sbjct: 1   MDPHNFGNHPRLKPPMVLTGTANEGSAGPPIGLTDIGVSEDAYLFRVALPGLRKNECSVK 60

Query: 61  FEIKRDGKVQIEGVMA-GPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPS 120
            EI  DG V + GV+    G+L++SS +++++VQQLCPPGP TISFKLPGPVDPRL  P+
Sbjct: 61  CEILHDGTVHVRGVVTPDGGILRDSSGVFQLRVQQLCPPGPFTISFKLPGPVDPRLFCPN 120

Query: 121 FRADGILEVVVMKSKAP 137
           FRADGILE VVMK + P
Sbjct: 121 FRADGILEGVVMKQRVP 137

[Close]

BLAST of CmaCh05G009640 vs. TrEMBL
Match: M5WFA9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013125mg PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.0e-43
Identity = 89/136 (65.44%), Postives = 106/136 (77.94%), Query Frame = 1


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           M +E   D   L P+V+L GTA  G+ GPP GLVDIGVSE AYLFRVA+PG+RK+  +VK
Sbjct: 1   MGVENVADLPPLDPAVVLIGTAKGGNVGPPSGLVDIGVSEAAYLFRVALPGIRKNECRVK 60

Query: 61  FEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSF 120
            +I+RDGKV IEG+M G GLL+ SS +Y  +VQQLCPPG  +ISF+LPGPVDPRL SP F
Sbjct: 61  CDIQRDGKVHIEGIMTGVGLLRNSSTVYHSRVQQLCPPGEFSISFRLPGPVDPRLFSPYF 120

Query: 121 RADGILEVVVMKSKAP 137
           R DGILEVVVMK +AP
Sbjct: 121 RHDGILEVVVMKGRAP 136

[Close]

BLAST of CmaCh05G009640 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 7.5e-37
Identity = 71/117 (60.68%), Postives = 92/117 (78.63%), Query Frame = 1


Query: 16  VILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIEGVM 75
           V  TGTA  GS GPPIGLVDIGVSE AY+FRV++PG+ K+  K+K EI+R+G+V I+GV+
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query: 76  AGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRADGILEVVVMK 133
               +  ++  +Y M+VQQLCPPGP +I+F LPG VDPRL SP+FR+DGI EVVV+K
Sbjct: 79  PEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of CmaCh05G009640 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 9.5e-32
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1


Query: 13  KPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKVQIE 72
           +PSV+ TGTA++ + G  +G+VDIGV++ AY F+VA+PGVRKD  +   EI+ DGKV +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 73  G-VMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRADGILEVVVM 132
           G    G   +K  S ++EM +++LCPPGP  + F LPGPVDPRL SP+FR+DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 133 KSK 135
           + K
Sbjct: 459 RHK 461

[Close]

BLAST of CmaCh05G009640 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.6e-23
Identity = 56/124 (45.16%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 10  TRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIKRDGKV 69
           ++ K  V LTG+A  G  G  IGLVDI  SE +Y FRVA+PGV +D  +   EI+ DGK+
Sbjct: 78  SQTKTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKI 137

Query: 70  QIEG-VMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRADGILEV 129
            I+G    G   + + + +++M  Q LCPPG  TI+F+LPGPV     + +F +DG+LE 
Sbjct: 138 MIKGATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEG 197

Query: 130 VVMK 133
           VV K
Sbjct: 198 VVKK 201

[Close]

BLAST of CmaCh05G009640 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 6.2e-23
Identity = 58/136 (42.65%), Postives = 80/136 (58.82%), Query Frame = 1


Query: 5   GHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFEIK 64
           G       KP V      +E   G  +GL+DIG  + AYLFRV++PGV++D      E++
Sbjct: 219 GEESDVAAKPEV-----KSEAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVE 278

Query: 65  RDGKVQIEGVMAGPGL-LKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRAD 124
            +GKV + GV    G  +K  S ++EM+ + LCPPG  ++SF+LPGPV P   S +F  D
Sbjct: 279 DNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTD 338

Query: 125 GILEVVVMKSKAPPTV 140
           GILE VVMK+    TV
Sbjct: 339 GILEGVVMKNLQKQTV 349

[Close]

BLAST of CmaCh05G009640 vs. NCBI nr
Match: gi|449453005|ref|XP_004144249.1| (PREDICTED: uncharacterized protein LOC101218704 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 3.3e-66
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 1


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFE 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 63  IKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRA 122
           IK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T+SFKLPGPVDPRLSSPSFR 
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 123 DGILEVVVMKSKAPPTVSDSYPPL 147
           DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPL 144

[Close]

BLAST of CmaCh05G009640 vs. NCBI nr
Match: gi|659129724|ref|XP_008464812.1| (PREDICTED: uncharacterized protein LOC103502607 isoform X2 [Cucumis melo])

HSP 1 Score: 259.6 bits (662), Expect = 3.3e-66
Identity = 128/144 (88.89%), Postives = 135/144 (93.75%), Query Frame = 1


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKFE 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD SKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 63  IKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFRA 122
           IK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T+SFKLPGPVDPRLSSPSFR 
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 123 DGILEVVVMKSKAPPTVSDSYPPL 147
           DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPL 144

[Close]

BLAST of CmaCh05G009640 vs. NCBI nr
Match: gi|659129720|ref|XP_008464810.1| (PREDICTED: uncharacterized protein LOC103502607 isoform X1 [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 4.0e-64
Identity = 127/148 (85.81%), Postives = 135/148 (91.22%), Query Frame = 1


Query: 3   MEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPS----K 62
           MEG+GDQT LKPSVILTGTA EGSSGPPIGLVDIGVSEGAYLFRVA+PGVRKD +    K
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRNESSGK 60

Query: 63  VKFEIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSP 122
           VKFEIK DGKVQIEGVM+GPG LKESSAMY+MKVQQLCPPGP T+SFKLPGPVDPRLSSP
Sbjct: 61  VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP 120

Query: 123 SFRADGILEVVVMKSKAPPTVSDSYPPL 147
           SFR DGILEVVVMKS+A PTV+DS PPL
Sbjct: 121 SFRPDGILEVVVMKSRAQPTVADSQPPL 148

[Close]

BLAST of CmaCh05G009640 vs. NCBI nr
Match: gi|1009133828|ref|XP_015884114.1| (PREDICTED: increased DNA methylation 3 [Ziziphus jujuba])

HSP 1 Score: 200.7 bits (509), Expect = 1.8e-48
Identity = 95/133 (71.43%), Postives = 113/133 (84.96%), Query Frame = 1


Query: 2   DMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVKF 61
           D +   DQ +LKPS++LTGTA EGS+GPP+GLVDIG SE AYLFR+A+PGVRKD SK+K 
Sbjct: 7   DEQSSADQPQLKPSIVLTGTAKEGSAGPPVGLVDIGESENAYLFRLALPGVRKDQSKMKC 66

Query: 62  EIKRDGKVQIEGVMAGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPSFR 121
           +I+RDG+V IEGVM G GLL++SS +Y+MKVQQLCPPGP +I F LPGPVDPRL SP+FR
Sbjct: 67  QIQRDGRVHIEGVMTGVGLLRDSSTVYQMKVQQLCPPGPFSICFNLPGPVDPRLFSPNFR 126

Query: 122 ADGILEVVVMKSK 135
            DGILEVVVMK K
Sbjct: 127 PDGILEVVVMKYK 139

[Close]

BLAST of CmaCh05G009640 vs. NCBI nr
Match: gi|703092055|ref|XP_010094520.1| (hypothetical protein L484_024812 [Morus notabilis])

HSP 1 Score: 196.1 bits (497), Expect = 4.4e-47
Identity = 96/138 (69.57%), Postives = 112/138 (81.16%), Query Frame = 1


Query: 1   MDMEGHGDQTRLKPSVILTGTANEGSSGPPIGLVDIGVSEGAYLFRVAMPGVRKDPSKVK 60
           M+ +      +LKPSV+ TGTA EGS GPP+GLVD+G SEGAYLFRVA+PGV+KD  K+K
Sbjct: 1   MEGQKFAGNPQLKPSVVFTGTAKEGSVGPPVGLVDVGESEGAYLFRVALPGVKKDQCKIK 60

Query: 61  FEIKRDGKVQIEGVM-AGPGLLKESSAMYEMKVQQLCPPGPLTISFKLPGPVDPRLSSPS 120
            EI+RDG+V IEGVM  G G L++SS +Y+MKVQQLCPPGP TISF LPGPVDPRL SPS
Sbjct: 61  CEIQRDGRVHIEGVMTGGVGPLRDSSTVYQMKVQQLCPPGPFTISFSLPGPVDPRLFSPS 120

Query: 121 FRADGILEVVVMKSKAPP 138
           FR DGILEVVVMK + PP
Sbjct: 121 FRPDGILEVVVMKHRKPP 138

The following BLAST results are available for this feature:

BLAST of CmaCh05G009640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IDM3_ARATH	1.7e-30	52.03	Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1	[more]
IDM2L_ARATH	6.4e-22	45.16	Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22...	[more]
IDM2_ARATH	1.1e-21	42.65	Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1	[more]

BLAST of CmaCh05G009640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDF2_CUCSA	2.3e-66	88.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355370 PE=4 SV=1	[more]
W9QWS3_9ROSA	3.1e-47	69.57	Uncharacterized protein OS=Morus notabilis GN=L484_024812 PE=4 SV=1	[more]
B9GJA0_POPTR	5.4e-44	61.22	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s24980g PE=4 SV=1	[more]
B9R8S9_RICCO	2.1e-43	64.96	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1602000 PE=4 SV=1	[more]
M5WFA9_PRUPE	6.0e-43	65.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013125mg PE=4 SV=1	[more]

BLAST of CmaCh05G009640 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76440.1	7.5e-37	60.68	HSP20-like chaperones superfamily protein	[more]
AT1G20870.1	9.5e-32	52.03	HSP20-like chaperones superfamily protein	[more]
AT1G54850.1	3.6e-23	45.16	HSP20-like chaperones superfamily protein	[more]
AT1G54840.1	6.2e-23	42.65	HSP20-like chaperones superfamily protein	[more]

BLAST of CmaCh05G009640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449453005\|ref\|XP_004144249.1\|	3.3e-66	88.89	PREDICTED: uncharacterized protein LOC101218704 [Cucumis sativus]	[more]
gi\|659129724\|ref\|XP_008464812.1\|	3.3e-66	88.89	PREDICTED: uncharacterized protein LOC103502607 isoform X2 [Cucumis melo]	[more]
gi\|659129720\|ref\|XP_008464810.1\|	4.0e-64	85.81	PREDICTED: uncharacterized protein LOC103502607 isoform X1 [Cucumis melo]	[more]
gi\|1009133828\|ref\|XP_015884114.1\|	1.8e-48	71.43	PREDICTED: increased DNA methylation 3 [Ziziphus jujuba]	[more]
gi\|703092055\|ref\|XP_010094520.1\|	4.4e-47	69.57	hypothetical protein L484_024812 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002068	A-crystallin/Hsp20_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G009640.1	CmaCh05G009640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PROFILE	PS01031	HSP20	coord: 35..132 score: 9
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 34..136 score: 1.
IPR008978	HSP20-like chaperone	unknown	SSF49764	HSP20-like chaperones	coord: 32..136 score: 3.3
None	No IPR available	PANTHER	PTHR34661	FAMILY NOT NAMED	coord: 1..138 score: 3.6
None	No IPR available	PANTHER	PTHR34661:SF2	SUBFAMILY NOT NAMED	coord: 1..138 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh05G009640	Cla021916	Watermelon (97103) v1	cmawmB752
CmaCh05G009640	Csa6G355370	Cucumber (Chinese Long) v2	cmacuB806
CmaCh05G009640	MELO3C026520	Melon (DHL92) v3.5.1	cmameB726
CmaCh05G009640	ClCG08G009210	Watermelon (Charleston Gray)	cmawcgB710
CmaCh05G009640	CSPI06G18450	Wild cucumber (PI 183967)	cmacpiB817
CmaCh05G009640	CmoCh12G006280	Cucurbita moschata (Rifu)	cmacmoB771
CmaCh05G009640	CmoCh05G009830	Cucurbita moschata (Rifu)	cmacmoB787
CmaCh05G009640	Lsi08G007710	Bottle gourd (USVL1VR-Ls)	cmalsiB738
CmaCh05G009640	Cp4.1LG11g07720	Cucurbita pepo (Zucchini)	cmacpeB767
CmaCh05G009640	Cp4.1LG07g05710	Cucurbita pepo (Zucchini)	cmacpeB800
CmaCh05G009640	MELO3C026520.2	Melon (DHL92) v3.6.1	cmamedB819
CmaCh05G009640	CsaV3_6G031340	Cucumber (Chinese Long) v3	cmacucB0951
CmaCh05G009640	Cla97C08G152040	Watermelon (97103) v2	cmawmbB831
CmaCh05G009640	Bhi04G000957	Wax gourd	cmawgoB0941
CmaCh05G009640	CsGy6G017950	Cucumber (Gy14) v2	cgybcmaB845
CmaCh05G009640	Carg21893	Silver-seed gourd	carcmaB0290

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh05G009640	CmaCh12G006930	Cucurbita maxima (Rimu)	cmacmaB201

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh05G009640	Silver-seed gourd	carcmaB0174
CmaCh05G009640	Silver-seed gourd	carcmaB0492
CmaCh05G009640	Silver-seed gourd	carcmaB0504
CmaCh05G009640	Cucurbita maxima (Rimu)	cmacmaB433
CmaCh05G009640	Cucurbita maxima (Rimu)	cmacmaB489
CmaCh05G009640	Cucurbita maxima (Rimu)	cmacmaB541
CmaCh05G009640	Wild cucumber (PI 183967)	cmacpiB811
CmaCh05G009640	Melon (DHL92) v3.5.1	cmameB742
CmaCh05G009640	Cucumber (Gy14) v2	cgybcmaB559
CmaCh05G009640	Melon (DHL92) v3.6.1	cmamedB837