CmaCh12G006930 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh12G006930
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionHSP20-like chaperones superfamily protein
LocationCma_Chr12 : 3749381 .. 3752852 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACTTAGCTTTCTCTCTTTCCTTTTTGAACTTCCCAAAAGCCGCCTCCTGAAGAAGCTGCCAATTGCCCACACCAAGCCTCCTGAAGCTGTCAAAACCCGCCTCCAACACCACTTTCAGGTATTCTCTCCGGCCACCACCACCCTTTTCTTCATCTTTTCATCTTGCTTTTCCCGTTTTCCGCTTTTCTCTCTTCCTCTCTGTGTATTGCCAAACGTCTTTCACAATGTGATTTGCAACTTTTTTCAATTATTTCTCCAACATTGCTTCCGTTCTTTATTTCTCGATTTTTCTTCGGGGTTTAACGCTCATTTATTTTGTGCTGATTGCGGCTCTTCTTCTGGTCGCTCGTCGCGAAATCCGTATGTTATTTTCTTGTTCTTGGTTGGTTCTTCAGTAGAATCCCTTGCTGTTTTCTTCTTGTTTATGTGCACACACAAACTTACAAATCATACAGTGGTGGGGAAGGAAGATTCATGTTCTACCCTGTATTTGGTTTTGAAACTTTCAACTTTTTTAACCCTAAACTCAGAATTAGTGATGAAATTAGTACCTCTTAGCTGTATGAAAATAATTGCTAAACCAAAATCAAGCCAAACAAATGGGTTTTTTAGATCCATTCACTGAGTCAATAGCATTGTCCAGCCATTGATAACTCACAACTACTCCCAAGTCTTGTAAAAAAAGAAAATTCAATGCGGGAAGGTATTGGTTTCGTGACTGGACGATTCAGTAAGACGAAATTTAAAACTGAACTTCATGAACTTTACTCAAGAATCAATAAGATTGCTTTACGTGAGATCCTCCTCGGTTGGAGAGGGGAACAAAACATTCCGTATAAGGGTGTGGAAATCTTTTCCTAGTAGACGGGTTTTAAAACTATGAGGCTGAAGACAATATGTAATGGGCCAAAACGGATAATATATACTAGTGGTGGGCTTGGATTGTTAAAAATGGTATCAGAGTCAGACACCAGGCGGTGTGCTAGCGAAGACGCTGGGCCCTTAGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGGGGGAATGAAGCATTCCTTATAAAGATGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACTGTGAGGCTAACGCTGATACGTAATAGGCCAAAACGGACTGTTACACTTTTTGTGATTCTCTGGATTTTAGGAGCTCCCAGCCTTTGCTATGTCACCACTCTGGGAACATATCTATGCTTTAGATTCAAAATTTATCCCATTGTAATTGAAACGTTTTCCTTATTCTAGAGCTTCATTTCTTCAATTGAACAGGTCAATTTTCTTTCAAATATGTCTAAGAGATCCTTCTGTTCTTCATAAGATGTGAAAGGACTGGAAAATATAACTTCTCATATAATATTTAATGATTCAGTATCCATTTGAATATTTTTCGTTTAACAAGTCCTGGTGTGATAATAATTTCTTACTTTTCCCCCTCTGCTAGTGCTGTTGGCCGCGGATTTGATTACTGATCTTTTAGCTATGTGGTTCAATCTTTTTGATCCACTTGTTAAACTTCAAAATTTGATAGCCATATTTGGGGTTAGACACCCCTTCATCTGTCTTTGAGGAGCAGTCGTCTCTTACAGATTCAGGAATATCAACTAAATTATATAGATTATTTATGTGAGCAATAACTTAAAATATCCTTGCATGAAGTTCAATATCTTTCTGTCTTTGCTTGTCAAACAACCATTTGAAGGATATAAACATAGCCAAATTCCTAATTGTGAGTTTATTATTGTAATTCATAGGCATTGGGATATAAACATGGCCTTTCCTTCTGAATCGAGAATATGCTGCAGGTATGTAGAATCCTGTTTCTGTGATGCGTATCATATTGACATAAGCAGATTTATAGCATGCTCGGGTCAACTGGCACGATTTATTCTGTGGTTGGGCTTCGATTTTCAGTTTACGCTTTCAACCAGCATGCATTGCGGTGAAAAGAGAGTTCTCTATGCTTACACAAGTATTAAAATCTTTAGAAGAATATTATGGAGCAATTATTCATTGACCTTCAAATATCTTGTTGCATGTAATCCAGATTTGTCTATGAAAAAGAAGTTCTAAATCAGTGCTTGAAATTTAAAAGGGCATATCTCTTAACGAAGTTACTTCATGGTCCAATACCTTTATCTGGTTTATTAGGTAATGAATTCCTTTTAAGGCAAAAATGAAACAGGTTAGAAGCACCCCACACACCCTAGAACATACACACGTTCAGGTAAATAGCGAAAGCGTGAGAACCTTCTGGCAAATCAACTTATCCCGAACTCGAAGAAACGGTTCACTTATTTTGTGTAAGTTTTTTCTTCGATGATAGTGTAGAGGGAACGAACATATGACAGCAACCATTCTAAAGCGTATTTAGCATTTGATATTTTTCAAATTGTACTCATTTGTACTAAGGTTCCTTTGATCATCATGGATTGTATGTTTCAATATCTTCTATCCCCATTAAGATCTGTGTGCCTCATTAACAGGTGAATTGAAAACATCAAACAAACAATCTACAAAGTTCCATAAGTGGAGACTGGAGCATGGTCATGGAAGGCCATGGCGATCATATGAAGCTGAAGCCATCAGTTATTCTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCGATTGGTCTTGTCGATATTGGCGTGAGTGAAGGTGCATACCTTTTCCGCGTTGCATTGCCTGGTGTACGGAAGGATCGAAGTAAGCTCCTTGATTCGTCTTATTTTTCTCTCAATCTAGCATTCGTGTAGAACTCATCCTTTTATATGTTTGCTTATTAGAAAGATAATCAACTAGATAATTCTTCCAGGTAAGGTAAAGTTTGAGATCAAAAGCGATGGTAGGGTTCACATTGAAGGAGTGATGACAGGTCCAGGCCTTTTGAAGGATTCATCAGCTATGTATCAGATGAAAGTGCAGCAGCTGTGTCCTCCCGGATCTTTTACGGTTTCTTTTAAACTGCCCGGACCAGTAGATCCACGGTTGTCGTCTCCTAGTTTTCGGCCCGATGGCATTCTGGAAGTAGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCCTTCCTCCGCCGTGAGTGTGATGGAGGTAGGTACATGGTTTTGCTGTCTCCTTATGTTAGTTTTCTATGAAAAAGGGTCACTTTACAACGTAGTTTAGCTCATTAACCTGTTGGTTTTGGAGTTTGAATTATGTGTTTAACAAGACCTTGTCGTTAATGTTATAACTTTAATAGTTAAATCACATGTTGAATGTATTATTAGGGATTATGGGTAACATTCTAGGTGGACTTGTTTTGTACACCTAGAAAACAAAACCCTTTTCTCTTGGTCTTAAGCACGTCTCATTGGCCTATTAACCCGATCGAAACTAGTCTACCTAGGATGTGTTGTTGACTATATAATCTCTAATCAAAACCATTATCGTTTCA

mRNA sequence

CAACTTAGCTTTCTCTCTTTCCTTTTTGAACTTCCCAAAAGCCGCCTCCTGAAGAAGCTGCCAATTGCCCACACCAAGCCTCCTGAAGCTGTCAAAACCCGCCTCCAACACCACTTTCAGGCATTGGGATATAAACATGGCCTTTCCTTCTGAATCGAGAATATGCTGCAGTGGAGACTGGAGCATGGTCATGGAAGGCCATGGCGATCATATGAAGCTGAAGCCATCAGTTATTCTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCGATTGGTCTTGTCGATATTGGCGTGAGTGAAGGTGCATACCTTTTCCGCGTTGCATTGCCTGGTGTACGGAAGGATCGAAGTAAGGTAAAGTTTGAGATCAAAAGCGATGGTAGGGTTCACATTGAAGGAGTGATGACAGGTCCAGGCCTTTTGAAGGATTCATCAGCTATGTATCAGATGAAAGTGCAGCAGCTGTGTCCTCCCGGATCTTTTACGGTTTCTTTTAAACTGCCCGGACCAGTAGATCCACGGTTGTCGTCTCCTAGTTTTCGGCCCGATGGCATTCTGGAAGTAGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCCTTCCTCCGCCGTGAGTGTGATGGAGGTAGGTACATGGTTTTGCTGTCTCCTTATGTTAGTTTTCTATGAAAAAGGGTCACTTTACAACGTAGTTTAGCTCATTAACCTGTTGGTTTTGGAGTTTGAATTATGTGTTTAACAAGACCTTGTCGTTAATGTTATAACTTTAATAGTTAAATCACATGTTGAATGTATTATTAGGGATTATGGGTAACATTCTAGGTGGACTTGTTTTGTACACCTAGAAAACAAAACCCTTTTCTCTTGGTCTTAAGCACGTCTCATTGGCCTATTAACCCGATCGAAACTAGTCTACCTAGGATGTGTTGTTGACTATATAATCTCTAATCAAAACCATTATCGTTTCA

Coding sequence (CDS)

ATGGCCTTTCCTTCTGAATCGAGAATATGCTGCAGTGGAGACTGGAGCATGGTCATGGAAGGCCATGGCGATCATATGAAGCTGAAGCCATCAGTTATTCTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCGATTGGTCTTGTCGATATTGGCGTGAGTGAAGGTGCATACCTTTTCCGCGTTGCATTGCCTGGTGTACGGAAGGATCGAAGTAAGGTAAAGTTTGAGATCAAAAGCGATGGTAGGGTTCACATTGAAGGAGTGATGACAGGTCCAGGCCTTTTGAAGGATTCATCAGCTATGTATCAGATGAAAGTGCAGCAGCTGTGTCCTCCCGGATCTTTTACGGTTTCTTTTAAACTGCCCGGACCAGTAGATCCACGGTTGTCGTCTCCTAGTTTTCGGCCCGATGGCATTCTGGAAGTAGTGGTTATGAAGTCCAGAGCACCTCCAACAGTGGCTGATTCCCTTCCTCCGCCGTGA

Protein sequence

MAFPSESRICCSGDWSMVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAPPTVADSLPPP
Homology
[Close]
BLAST of CmaCh12G006930 vs. Swiss-Prot
Match: IDM3_ARATH (Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.4e-30
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1 

Query: 29  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIE 88
           +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDG+V +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 89  GVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGILEVVVM 148
           G  T G   +K  S +++M +++LCPPG F + F LPGPVDPRL SP+FR DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 149 KSR 151
           + +
Sbjct: 459 RHK 461

[Close]
BLAST of CmaCh12G006930 vs. Swiss-Prot
Match: IDM2_ARATH (Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-23
Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 1 

Query: 21  GHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIK 80
           G    +  KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++
Sbjct: 219 GEESDVAAKPEV-----KSEAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVE 278

Query: 81  SDGRVHIEGVMTGPGL-LKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPD 140
            +G+V + GV T  G  +K  S +++M+ + LCPPG+F+VSF+LPGPV P   S +F  D
Sbjct: 279 DNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTD 338

Query: 141 GILEVVVMKSRAPPTV 156
           GILE VVMK+    TV
Sbjct: 339 GILEGVVMKNLQKQTV 349

[Close]
BLAST of CmaCh12G006930 vs. Swiss-Prot
Match: IDM2L_ARATH (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22.3 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 8.4e-23
Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 1 

Query: 29  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIE 88
           K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DG++ I+
Sbjct: 81  KTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKIMIK 140

Query: 89  G-VMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGILEVVVM 148
           G   TG   +   + +++M  Q LCPPG FT++F+LPGPV     + +F  DG+LE VV 
Sbjct: 141 GATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEGVVK 200

[Close]
BLAST of CmaCh12G006930 vs. TrEMBL
Match: A0A0A0KDF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355370 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-67
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 1 

Query: 19  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 78
           MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 79  IKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRP 138
           IKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 139 DGILEVVVMKSRAPPTVADSLPP 162
           DGILEVVVMKSRA PTVADS PP
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPP 143

[Close]
BLAST of CmaCh12G006930 vs. TrEMBL
Match: W9QWS3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024812 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.7e-51
Identity = 105/138 (76.09%), Postives = 117/138 (84.78%), Query Frame = 1 

Query: 19  MEGH--GDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVK 78
           MEG     + +LKPSV+ TGTAKEGS GPP+GLVD+G SEGAYLFRVALPGV+KD+ K+K
Sbjct: 1   MEGQKFAGNPQLKPSVVFTGTAKEGSVGPPVGLVDVGESEGAYLFRVALPGVKKDQCKIK 60

Query: 79  FEIKSDGRVHIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPS 138
            EI+ DGRVHIEGVMT G G L+DSS +YQMKVQQLCPPG FT+SF LPGPVDPRL SPS
Sbjct: 61  CEIQRDGRVHIEGVMTGGVGPLRDSSTVYQMKVQQLCPPGPFTISFSLPGPVDPRLFSPS 120

Query: 139 FRPDGILEVVVMKSRAPP 154
           FRPDGILEVVVMK R PP
Sbjct: 121 FRPDGILEVVVMKHRKPP 138

[Close]
BLAST of CmaCh12G006930 vs. TrEMBL
Match: B9GJA0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s24980g PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.8e-46
Identity = 93/136 (68.38%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 27  KLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVH 86
           KLKP VIL+GTAKEGS+GPPIGLVDIGVSE AYLFRVALPG+R++ S +K +I+ +G VH
Sbjct: 11  KLKPLVILSGTAKEGSAGPPIGLVDIGVSENAYLFRVALPGIRRNESNLKCDIQHNGTVH 70

Query: 87  IEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGILEVV 146
           I+GV+T   G+LKDSS+++QM+VQQLCPPG FT+SFKLPGPVDPRL  P+FR DG+LEV 
Sbjct: 71  IKGVVTVDAGMLKDSSSVFQMRVQQLCPPGPFTISFKLPGPVDPRLFCPNFRNDGVLEVA 130

Query: 147 VMKSRAPPTVADSLPP 162
           VMK R P    + +PP
Sbjct: 131 VMKYRPPSAPTNGVPP 146

[Close]
BLAST of CmaCh12G006930 vs. TrEMBL
Match: M5WFA9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013125mg PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-45
Identity = 92/136 (67.65%), Postives = 110/136 (80.88%), Query Frame = 1 

Query: 17  MVMEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVK 76
           M +E   D   L P+V+L GTAK G+ GPP GLVDIGVSE AYLFRVALPG+RK+  +VK
Sbjct: 1   MGVENVADLPPLDPAVVLIGTAKGGNVGPPSGLVDIGVSEAAYLFRVALPGIRKNECRVK 60

Query: 77  FEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSF 136
            +I+ DG+VHIEG+MTG GLL++SS +Y  +VQQLCPPG F++SF+LPGPVDPRL SP F
Sbjct: 61  CDIQRDGKVHIEGIMTGVGLLRNSSTVYHSRVQQLCPPGEFSISFRLPGPVDPRLFSPYF 120

Query: 137 RPDGILEVVVMKSRAP 153
           R DGILEVVVMK RAP
Sbjct: 121 RHDGILEVVVMKGRAP 136

[Close]
BLAST of CmaCh12G006930 vs. TrEMBL
Match: B9R8S9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1602000 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-44
Identity = 90/131 (68.70%), Postives = 107/131 (81.68%), Query Frame = 1 

Query: 23  GDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSD 82
           G+H +LKP ++LTGTA EGS+GPPIGL DIGVSE AYLFRVALPG+RK+   VK EI  D
Sbjct: 7   GNHPRLKPPMVLTGTANEGSAGPPIGLTDIGVSEDAYLFRVALPGLRKNECSVKCEILHD 66

Query: 83  GRVHIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGI 142
           G VH+ GV+T   G+L+DSS ++Q++VQQLCPPG FT+SFKLPGPVDPRL  P+FR DGI
Sbjct: 67  GTVHVRGVVTPDGGILRDSSGVFQLRVQQLCPPGPFTISFKLPGPVDPRLFCPNFRADGI 126

Query: 143 LEVVVMKSRAP 153
           LE VVMK R P
Sbjct: 127 LEGVVMKQRVP 137

[Close]
BLAST of CmaCh12G006930 vs. TAIR10
Match: AT1G76440.1 (AT1G76440.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 157.5 bits (397), Expect = 6.8e-39
Identity = 75/124 (60.48%), Postives = 96/124 (77.42%), Query Frame = 1 

Query: 25  HMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGR 84
           H K+   V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +GR
Sbjct: 12  HSKVISHVFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGR 71

Query: 85  VHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGILEV 144
           V I+GV+    +  D+  +Y+M+VQQLCPPG F+++F LPG VDPRL SP+FR DGI EV
Sbjct: 72  VCIQGVIPEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEV 131

Query: 145 VVMK 149
           VV+K
Sbjct: 132 VVVK 135

[Close]
BLAST of CmaCh12G006930 vs. TAIR10
Match: AT1G20870.1 (AT1G20870.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 133.3 bits (334), Expect = 1.4e-31
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1 

Query: 29  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIE 88
           +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDG+V +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 89  GVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGILEVVVM 148
           G  T G   +K  S +++M +++LCPPG F + F LPGPVDPRL SP+FR DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 149 KSR 151
           + +
Sbjct: 459 RHK 461

[Close]
BLAST of CmaCh12G006930 vs. TAIR10
Match: AT1G54840.1 (AT1G54840.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 108.6 bits (270), Expect = 3.6e-24
Identity = 60/136 (44.12%), Postives = 83/136 (61.03%), Query Frame = 1 

Query: 21  GHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIK 80
           G    +  KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++
Sbjct: 219 GEESDVAAKPEV-----KSEAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVE 278

Query: 81  SDGRVHIEGVMTGPGL-LKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPD 140
            +G+V + GV T  G  +K  S +++M+ + LCPPG+F+VSF+LPGPV P   S +F  D
Sbjct: 279 DNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTD 338

Query: 141 GILEVVVMKSRAPPTV 156
           GILE VVMK+    TV
Sbjct: 339 GILEGVVMKNLQKQTV 349

[Close]
BLAST of CmaCh12G006930 vs. TAIR10
Match: AT1G54850.1 (AT1G54850.1 HSP20-like chaperones superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-24
Identity = 57/121 (47.11%), Postives = 76/121 (62.81%), Query Frame = 1 

Query: 29  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGRVHIE 88
           K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DG++ I+
Sbjct: 81  KTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKIMIK 140

Query: 89  G-VMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPDGILEVVVM 148
           G   TG   +   + +++M  Q LCPPG FT++F+LPGPV     + +F  DG+LE VV 
Sbjct: 141 GATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEGVVK 200

[Close]
BLAST of CmaCh12G006930 vs. NCBI nr
Match: gi|449453005|ref|XP_004144249.1| (PREDICTED: uncharacterized protein LOC101218704 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 3.3e-67
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 1 

Query: 19  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 78
           MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 79  IKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRP 138
           IKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 139 DGILEVVVMKSRAPPTVADSLPP 162
           DGILEVVVMKSRA PTVADS PP
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPP 143

[Close]
BLAST of CmaCh12G006930 vs. NCBI nr
Match: gi|659129724|ref|XP_008464812.1| (PREDICTED: uncharacterized protein LOC103502607 isoform X2 [Cucumis melo])

HSP 1 Score: 263.1 bits (671), Expect = 3.3e-67
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 1 

Query: 19  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 78
           MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 79  IKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRP 138
           IKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 139 DGILEVVVMKSRAPPTVADSLPP 162
           DGILEVVVMKSRA PTVADS PP
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPP 143

[Close]
BLAST of CmaCh12G006930 vs. NCBI nr
Match: gi|659129720|ref|XP_008464810.1| (PREDICTED: uncharacterized protein LOC103502607 isoform X1 [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 4.0e-65
Identity = 130/147 (88.44%), Postives = 135/147 (91.84%), Query Frame = 1 

Query: 19  MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----K 78
           MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDR+    K
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRNESSGK 60

Query: 79  VKFEIKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSP 138
           VKFEIKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FTVSFKLPGPVDPRLSSP
Sbjct: 61  VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP 120

Query: 139 SFRPDGILEVVVMKSRAPPTVADSLPP 162
           SFRPDGILEVVVMKSRA PTVADS PP
Sbjct: 121 SFRPDGILEVVVMKSRAQPTVADSQPP 147

[Close]
BLAST of CmaCh12G006930 vs. NCBI nr
Match: gi|703092055|ref|XP_010094520.1| (hypothetical protein L484_024812 [Morus notabilis])

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 105/138 (76.09%), Postives = 117/138 (84.78%), Query Frame = 1 

Query: 19  MEGH--GDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVK 78
           MEG     + +LKPSV+ TGTAKEGS GPP+GLVD+G SEGAYLFRVALPGV+KD+ K+K
Sbjct: 1   MEGQKFAGNPQLKPSVVFTGTAKEGSVGPPVGLVDVGESEGAYLFRVALPGVKKDQCKIK 60

Query: 79  FEIKSDGRVHIEGVMT-GPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPS 138
            EI+ DGRVHIEGVMT G G L+DSS +YQMKVQQLCPPG FT+SF LPGPVDPRL SPS
Sbjct: 61  CEIQRDGRVHIEGVMTGGVGPLRDSSTVYQMKVQQLCPPGPFTISFSLPGPVDPRLFSPS 120

Query: 139 FRPDGILEVVVMKSRAPP 154
           FRPDGILEVVVMK R PP
Sbjct: 121 FRPDGILEVVVMKHRKPP 138

[Close]
BLAST of CmaCh12G006930 vs. NCBI nr
Match: gi|1009133828|ref|XP_015884114.1| (PREDICTED: increased DNA methylation 3 [Ziziphus jujuba])

HSP 1 Score: 209.1 bits (531), Expect = 5.6e-51
Identity = 98/129 (75.97%), Postives = 114/129 (88.37%), Query Frame = 1 

Query: 20  EGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEI 79
           +   D  +LKPS++LTGTAKEGS+GPP+GLVDIG SE AYLFR+ALPGVRKD+SK+K +I
Sbjct: 9   QSSADQPQLKPSIVLTGTAKEGSAGPPVGLVDIGESENAYLFRLALPGVRKDQSKMKCQI 68

Query: 80  KSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRPD 139
           + DGRVHIEGVMTG GLL+DSS +YQMKVQQLCPPG F++ F LPGPVDPRL SP+FRPD
Sbjct: 69  QRDGRVHIEGVMTGVGLLRDSSTVYQMKVQQLCPPGPFSICFNLPGPVDPRLFSPNFRPD 128

Query: 140 GILEVVVMK 149
           GILEVVVMK
Sbjct: 129 GILEVVVMK 137

The following BLAST results are available for this feature:
BLAST of CmaCh12G006930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IDM3_ARATH2.4e-3052.03Increased DNA methylation 3 OS=Arabidopsis thaliana GN=IDM3 PE=1 SV=1[more]
IDM2_ARATH6.4e-2344.12Increased DNA methylation 2 OS=Arabidopsis thaliana GN=IDM2 PE=1 SV=1[more]
IDM2L_ARATH8.4e-2347.11Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana GN=ACD22... [more]
BLAST of CmaCh12G006930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDF2_CUCSA2.3e-6791.61Uncharacterized protein OS=Cucumis sativus GN=Csa_6G355370 PE=4 SV=1[more]
W9QWS3_9ROSA1.7e-5176.09Uncharacterized protein OS=Morus notabilis GN=L484_024812 PE=4 SV=1[more]
B9GJA0_POPTR3.8e-4668.38Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s24980g PE=4 SV=1[more]
M5WFA9_PRUPE1.4e-4567.65Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013125mg PE=4 SV=1[more]
B9R8S9_RICCO1.2e-4468.70Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1602000 PE=4 SV=1[more]
BLAST of CmaCh12G006930 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G76440.16.8e-3960.48 HSP20-like chaperones superfamily protein[more]
AT1G20870.11.4e-3152.03 HSP20-like chaperones superfamily protein[more]
AT1G54840.13.6e-2444.12 HSP20-like chaperones superfamily protein[more]
AT1G54850.14.7e-2447.11 HSP20-like chaperones superfamily protein[more]
BLAST of CmaCh12G006930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449453005|ref|XP_004144249.1|3.3e-6791.61PREDICTED: uncharacterized protein LOC101218704 [Cucumis sativus][more]
gi|659129724|ref|XP_008464812.1|3.3e-6791.61PREDICTED: uncharacterized protein LOC103502607 isoform X2 [Cucumis melo][more]
gi|659129720|ref|XP_008464810.1|4.0e-6588.44PREDICTED: uncharacterized protein LOC103502607 isoform X1 [Cucumis melo][more]
gi|703092055|ref|XP_010094520.1|2.5e-5176.09hypothetical protein L484_024812 [Morus notabilis][more]
gi|1009133828|ref|XP_015884114.1|5.6e-5175.97PREDICTED: increased DNA methylation 3 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G006930.1CmaCh12G006930.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002068Alpha crystallin/Hsp20 domainPROFILEPS01031HSP20coord: 51..148
score: 10
IPR008978HSP20-like chaperoneGENE3DG3DSA:2.60.40.790coord: 50..152
score: 1.
IPR008978HSP20-like chaperoneunknownSSF49764HSP20-like chaperonescoord: 47..151
score: 4.1
NoneNo IPR availablePANTHERPTHR34661FAMILY NOT NAMEDcoord: 15..154
score: 7.9
NoneNo IPR availablePANTHERPTHR34661:SF2SUBFAMILY NOT NAMEDcoord: 15..154
score: 7.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh12G006930Cla021916Watermelon (97103) v1cmawmB153
CmaCh12G006930Csa6G355370Cucumber (Chinese Long) v2cmacuB195
CmaCh12G006930MELO3C026520Melon (DHL92) v3.5.1cmameB164
CmaCh12G006930ClCG08G009210Watermelon (Charleston Gray)cmawcgB175
CmaCh12G006930CSPI06G18450Wild cucumber (PI 183967)cmacpiB198
CmaCh12G006930CmoCh12G006280Cucurbita moschata (Rifu)cmacmoB176
CmaCh12G006930CmoCh05G009830Cucurbita moschata (Rifu)cmacmoB201
CmaCh12G006930Cp4.1LG07g05710Cucurbita pepo (Zucchini)cmacpeB203
CmaCh12G006930Cp4.1LG11g07720Cucurbita pepo (Zucchini)cmacpeB181
CmaCh12G006930MELO3C026520.2Melon (DHL92) v3.6.1cmamedB179
CmaCh12G006930CsaV3_6G031340Cucumber (Chinese Long) v3cmacucB0224
CmaCh12G006930Cla97C08G152040Watermelon (97103) v2cmawmbB200
CmaCh12G006930Bhi04G000957Wax gourdcmawgoB0213
CmaCh12G006930CsGy6G017950Cucumber (Gy14) v2cgybcmaB718
CmaCh12G006930Carg21893Silver-seed gourdcarcmaB0289
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh12G006930CmaCh05G009640Cucurbita maxima (Rimu)cmacmaB201
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh12G006930Bottle gourd (USVL1VR-Ls)cmalsiB190
CmaCh12G006930Cucumber (Gy14) v2cgybcmaB480
CmaCh12G006930Melon (DHL92) v3.6.1cmamedB199
CmaCh12G006930Silver-seed gourdcarcmaB0172
CmaCh12G006930Silver-seed gourdcarcmaB0502
CmaCh12G006930Wax gourdcmawgoB0202
CmaCh12G006930Cucurbita maxima (Rimu)cmacmaB181
CmaCh12G006930Wild cucumber (PI 183967)cmacpiB188
CmaCh12G006930Melon (DHL92) v3.5.1cmameB183