CsGy6G017960 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G017960
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein CUP-SHAPED COTYLEDON 3 isoform X1
Location	Chr6 : 18778393 .. 18781495 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTATTTGTCTACATCAACCCCTTCATAACTTAGTTTATTCATTTAATTTCTCACATTTTCTAAATTCTTTCCAAAAAAAAAAAAAAAAATCATTCCCTCTCTTATATCTTAGACCCTTCTCAAATTATTATTACACTCATTATTGTTATTATTGTTATTATTATTTCTCCTTGTAGCTCTAATAACAAATGTTTGGAATTGAAGAAGTTATTGGAGAACTAAATAGAGAAGATGATCATGAAGAAAAAAGTGGAAGTGGTAAAGAGTTCATCATCAAGAAGCACCATAGATTATTGCCACCAGGTTATAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAAGTCTTCAAACCTTCAAACTTTGATCTCGGTGTCAACATTGCGGAAGTCGACCTCAATAGATGTGAGCCGTGGGAACTTCCAGGTAACTTAATGTACGTGTGTGTGTGTATTACGTACTAGCTAATTCAAAAGCTTAAGGTAATGATGAGTTGTTTTTGTGTTTTTTTTAGAAGAGGCAAAGATGGGTGAAAAAGAGTGGTATTTTTTCAGCTTAAGAGTGAGGAAATACCCAACAGGATTAAGAACAAATAGAGCAACAGTGGCTGGTTATTGGAAAGCAACAGGAAAAGATAGGCAAATTCATAGTAGTTGTAATGGAGTTAAGCTTGGAACTAAGAAAACACTTGTGTTTTATAAAGGAGGTGCTCCTAGAGGCATTAAAACCAAGTGGGTTATGCATGAATATCGCCTTCATTCTGATCTTGCTTCTCCTAATGTCTGCAAGGTGGGGTTCATTTTCTCATATCCATATATCTTCACGTTTCGTGACTGAATTTTATGCTGTTCCTTTACATTAATTACTTTAGCTTCCCTTTTTGTTAATCTTTTAGTTAGACTGTTTCAAATGAATAATTTCGATGTTTTAAAATGATGGGTTTTTAAAATTTAGTAACTTCTTAAACAAATGATAAAATTTTAGTGAAAAAGACAATGAGAAATGGCCAAATTTCATATATTTTAAGCCTTTCGTATCTACTTTTTAAAGTTTCTTTAGTTTATAAAGCTTTAATTGACTCTTTCCAAAAATCAAGTCAAGTTCGAAATTTCTTATAAAGAAAATAAGTTTTAAAAATTTGTTTATGTTTTGAAATTTGACGAAGAATGTTGCTCTTTTGCTTAAGCTAGATTGAAGAAAATGGTTGGACGAAATCCCAACCTACCATTTTTTTTCTAAACGAAACTGGAAATCAAATTGTTACTGCAATGTTAGCAAATTTTGTAACATGAAGAGATCAAAGGGGTATCTTTCTTTTCTTTTGTATTTTAATTATATTCTTTCAAATGATCTTTTGTAGCAGGACGAGTGGGTTCTATGTAGAATAATTCACAAATCCGGAGAGAAGATAAAACCTAAATCGTCCTTCCAAGAAACAGTTCCCTCTCCCATCTCTCTACCATCATTGTTACTCAACGCAACTCAATCCATAAACCATATCAACATCCAATCCCAACCACCTCTACACAACATTCAGCACCATGAAAATGGCCTGGAAAGCTTCATCATCAACAACCCACACTTCATTTTCCAACCCAACCTCTTTCCATTTGGCTTAAATAACCACGACCCACATTTGACGACACCACCGCCGCCGCCACCATCAATTCAAATGACCGACACGAACTATCACCCCCATTTTAACCCATCCTTGTTGCTCGACGGCGGCTGCGACAGCCAGCAGGCCTCCAGTTTTGGTGTTGACAGTGGCGGCACGTTGGTCGACGTCGCTGCTTATAGAGGTGCTCGGGGTGATCAATCCGATGAAAATTGGTCCGGAGGGTGCTGATGATTGGGTGTCAGTCTGTCAGATGTTTTGTGTTAAGATTATTATTATAATTATTATTATTATTCTCTACTACACAGATCCCGAAGCATTATTCTTCTTACTATTTTGCTTCTGTTTGATGATGCTCCAAGATCGATGTTATAGTACAATAATATTAATATCTCTACTTCGGACTTGCTTTATTTATGACATTTTCGTAGAATTGTTTGCATATATCCATGTTCAACTTTTCTTTTAAATGATCATTGTATTTTATTTATTTTTGAAAAATATAAGACACTACTTCAGTTCTTTGGGTTTGAGTTAGATTATAATCTAGGGCTCTTACTTTTCAAATTAAATAACTTTAGCTCTAAGTTTTGTTTTTGGAAACACCCAAGTGTTTATTCCTCACATTTTCTGTTAGTTATTATCAGAAAGTTTACTAGACATTCATTAGTGTAACAATTTTTTTTTTCTCACTCTTCTCTTCTTTTCATTCTTTTAATCTCCAATACTTATTGAGTCTTAGGTAAGAAAAGTTTTTTTAATTATTGTTTTTTAAATGAAAAGTTGATCATACTTGTCAATTTTCATTAGGTACAACAGATGTTGTACAAGAGACTAGTGTAATCAACTTGCACCTAATTATTTTCTTTCTTTCTCCTTGTACTCCAAATCTTTTTCGTCTCATGATTGTCCAGCCACCTATCGGTGTTGGGAAAAAGGAAAGAAAGAAAAAAAGAAAAACAATCCAATGTCAAGCCGTGTGTACAACTACAACGCAACGATGGGCGGTGGCGAGGTCGGAGATGACAACAGCGACAACGGTTGAGAAACATGGAGCCCAAAACAGATCAAGGTCCATCATGTCAGTAATATATATAAAATAACTGCATGTGGACTAGGTTGTAGCATTGTAGGTGAGAAGAAAAAATATATCTTTGTGGGAAAAAGAAGAAGCAGTGGGCAGTAACAATTTCACTCTCTCTCCCATTGTGGCTATTTTTGCTGAAGAAGACGATGAAAACCTCATTGTTTCTCTTGGTGTTTTCACTGCTTGTATTTTCCTTTCTTTCTATTAGAGAGAGTTTGAATGTTATTGTAAAATTAAGTGATCCATGAGCATTTTTCCATTTAAAGAAAATTGATAGAAATTATTCTTCGACCATTGTAAACTCTTGACAGTTTCTTCTTCAAATCATTTTACCGGAACCTGTATCGGTAGCAGAGAATTGGATATAGCTCACACATTTGGA

mRNA sequence

AGTATTTGTCTACATCAACCCCTTCATAACTTAGTTTATTCATTTAATTTCTCACATTTTCTAAATTCTTTCCAAAAAAAAAAAAAAAAATCATTCCCTCTCTTATATCTTAGACCCTTCTCAAATTATTATTACACTCATTATTGTTATTATTGTTATTATTATTTCTCCTTGTAGCTCTAATAACAAATGTTTGGAATTGAAGAAGTTATTGGAGAACTAAATAGAGAAGATGATCATGAAGAAAAAAGTGGAAGTGGTAAAGAGTTCATCATCAAGAAGCACCATAGATTATTGCCACCAGGTTATAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAAGTCTTCAAACCTTCAAACTTTGATCTCGGTGTCAACATTGCGGAAGTCGACCTCAATAGATGTGAGCCGTGGGAACTTCCAGAAGAGGCAAAGATGGGTGAAAAAGAGTGGTATTTTTTCAGCTTAAGAGTGAGGAAATACCCAACAGGATTAAGAACAAATAGAGCAACAGTGGCTGGTTATTGGAAAGCAACAGGAAAAGATAGGCAAATTCATAGTAGTTGTAATGGAGTTAAGCTTGGAACTAAGAAAACACTTGTGTTTTATAAAGGAGGTGCTCCTAGAGGCATTAAAACCAAGTGGGTTATGCATGAATATCGCCTTCATTCTGATCTTGCTTCTCCTAATGTCTGCAAGCAGGACGAGTGGGTTCTATGTAGAATAATTCACAAATCCGGAGAGAAGATAAAACCTAAATCGTCCTTCCAAGAAACAGTTCCCTCTCCCATCTCTCTACCATCATTGTTACTCAACGCAACTCAATCCATAAACCATATCAACATCCAATCCCAACCACCTCTACACAACATTCAGCACCATGAAAATGGCCTGGAAAGCTTCATCATCAACAACCCACACTTCATTTTCCAACCCAACCTCTTTCCATTTGGCTTAAATAACCACGACCCACATTTGACGACACCACCGCCGCCGCCACCATCAATTCAAATGACCGACACGAACTATCACCCCCATTTTAACCCATCCTTGTTGCTCGACGGCGGCTGCGACAGCCAGCAGGCCTCCAGTTTTGGTGTTGACAGTGGCGGCACGTTGGTCGACGTCGCTGCTTATAGAGGTGCTCGGGGTGATCAATCCGATGAAAATTGGTCCGGAGGGTGCTGATGATTGGGTGTCAGTCTGTCAGATGTTTTGTGTTAAGATTATTATTATAATTATTATTATTATTCTCTACTACACAGATCCCGAAGCATTATTCTTCTTACTATTTTGCTTCTGTTTGATGATGCTCCAAGATCGATGTTATAGTACAATAATATTAATATCTCTACTTCGGACTTGCTTTATTTATGACATTTTCGTAGAATTGTTTGCATATATCCATGTTCAACTTTTCTTTTAAATGATCATTGTATTTTATTTATTTTTGAAAAATATAAGACACTACTTCAGTTCTTTGGGTTTGAGTTAGATTATAATCTAGGGCTCTTACTTTTCAAATTAAATAACTTTAGCTCTAAGTTTTGTTTTTGGAAACACCCAAGTGTTTATTCCTCACATTTTCTGTTAGTTATTATCAGAAAGTTTACTAGACATTCATTAGTGTAACAATTTTTTTTTTCTCACTCTTCTCTTCTTTTCATTCTTTTAATCTCCAATACTTATTGAGTCTTAGGTAAGAAAAGTTTTTTTAATTATTGTTTTTTAAATGAAAAGTTGATCATACTTGTCAATTTTCATTAGGTACAACAGATGTTGTACAAGAGACTAGTGTAATCAACTTGCACCTAATTATTTTCTTTCTTTCTCCTTGTACTCCAAATCTTTTTCGTCTCATGATTGTCCAGCCACCTATCGGTGTTGGGAAAAAGGAAAGAAAGAAAAAAAGAAAAACAATCCAATGTCAAGCCGTGTGTACAACTACAACGCAACGATGGGCGGTGGCGAGGTCGGAGATGACAACAGCGACAACGGTTGAGAAACATGGAGCCCAAAACAGATCAAGGTCCATCATGTCAGTAATATATATAAAATAACTGCATGTGGACTAGGTTGTAGCATTGTAGGTGAGAAGAAAAAATATATCTTTGTGGGAAAAAGAAGAAGCAGTGGGCAGTAACAATTTCACTCTCTCTCCCATTGTGGCTATTTTTGCTGAAGAAGACGATGAAAACCTCATTGTTTCTCTTGGTGTTTTCACTGCTTGTATTTTCCTTTCTTTCTATTAGAGAGAGTTTGAATGTTATTGTAAAATTAAGTGATCCATGAGCATTTTTCCATTTAAAGAAAATTGATAGAAATTATTCTTCGACCATTGTAAACTCTTGACAGTTTCTTCTTCAAATCATTTTACCGGAACCTGTATCGGTAGCAGAGAATTGGATATAGCTCACACATTTGGA

Coding sequence (CDS)

ATGTTTGGAATTGAAGAAGTTATTGGAGAACTAAATAGAGAAGATGATCATGAAGAAAAAAGTGGAAGTGGTAAAGAGTTCATCATCAAGAAGCACCATAGATTATTGCCACCAGGTTATAGGTTTCACCCTACTGATGAAGAACTCATTGCCTTTTATCTTGCTTCAAAAGTCTTCAAACCTTCAAACTTTGATCTCGGTGTCAACATTGCGGAAGTCGACCTCAATAGATGTGAGCCGTGGGAACTTCCAGAAGAGGCAAAGATGGGTGAAAAAGAGTGGTATTTTTTCAGCTTAAGAGTGAGGAAATACCCAACAGGATTAAGAACAAATAGAGCAACAGTGGCTGGTTATTGGAAAGCAACAGGAAAAGATAGGCAAATTCATAGTAGTTGTAATGGAGTTAAGCTTGGAACTAAGAAAACACTTGTGTTTTATAAAGGAGGTGCTCCTAGAGGCATTAAAACCAAGTGGGTTATGCATGAATATCGCCTTCATTCTGATCTTGCTTCTCCTAATGTCTGCAAGCAGGACGAGTGGGTTCTATGTAGAATAATTCACAAATCCGGAGAGAAGATAAAACCTAAATCGTCCTTCCAAGAAACAGTTCCCTCTCCCATCTCTCTACCATCATTGTTACTCAACGCAACTCAATCCATAAACCATATCAACATCCAATCCCAACCACCTCTACACAACATTCAGCACCATGAAAATGGCCTGGAAAGCTTCATCATCAACAACCCACACTTCATTTTCCAACCCAACCTCTTTCCATTTGGCTTAAATAACCACGACCCACATTTGACGACACCACCGCCGCCGCCACCATCAATTCAAATGACCGACACGAACTATCACCCCCATTTTAACCCATCCTTGTTGCTCGACGGCGGCTGCGACAGCCAGCAGGCCTCCAGTTTTGGTGTTGACAGTGGCGGCACGTTGGTCGACGTCGCTGCTTATAGAGGTGCTCGGGGTGATCAATCCGATGAAAATTGGTCCGGAGGGTGCTGA

Protein sequence

MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEWVLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENGLESFIINNPHFIFQPNLFPFGLNNHDPHLTTPPPPPPSIQMTDTNYHPHFNPSLLLDGGCDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC

Homology

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BLAST of CsGy6G017960 vs. NCBI nr
Match: XP_011657330.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 694.5 bits (1791), Expect = 1.8e-196
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240
           VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG
Sbjct: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240

Query: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300
           LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC
Sbjct: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300

Query: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC
Sbjct: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 338

[Close]

BLAST of CsGy6G017960 vs. NCBI nr
Match: XP_011657331.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis sativus])

HSP 1 Score: 688.3 bits (1775), Expect = 1.3e-194
Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELP EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELP-EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240
           VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG
Sbjct: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240

Query: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300
           LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC
Sbjct: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300

Query: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC
Sbjct: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 337

[Close]

BLAST of CsGy6G017960 vs. NCBI nr
Match: XP_004144293.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis sativus] >KGN47519.1 hypothetical protein Csa_6G355380 [Cucumis sativus])

HSP 1 Score: 688.0 bits (1774), Expect = 1.7e-194
Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCK DEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCK-DEW 180

Query: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240
           VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG
Sbjct: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240

Query: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300
           LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC
Sbjct: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300

Query: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC
Sbjct: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 337

[Close]

BLAST of CsGy6G017960 vs. NCBI nr
Match: XP_008464816.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis melo])

HSP 1 Score: 660.2 bits (1702), Expect = 3.7e-186
Identity = 324/339 (95.58%), Postives = 328/339 (96.76%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKS +GKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKIKPK-SSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHEN 240
           VLCRIIHKSGEKIKPK SSFQET+PSPISLPSLLLNATQSINH NIQ QPP HNIQHHEN
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQSINHNNIQFQPPPHNIQHHEN 240

Query: 241 GLESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300
           GLESFIINNPHFIFQPNLF FGL+N D HL+ XXXXXXXIQMTDTNYHPHFNPSLLLDGG
Sbjct: 241 GLESFIINNPHFIFQPNLFSFGLHNPDTHLSTXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300

Query: 301 CDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           CDSQQASSFGVDSGGTLVDVA Y GARGDQSDENWSGGC
Sbjct: 301 CDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGGC 339

[Close]

BLAST of CsGy6G017960 vs. NCBI nr
Match: XP_008464818.1 (PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis melo])

HSP 1 Score: 654.1 bits (1686), Expect = 2.7e-184
Identity = 323/339 (95.28%), Postives = 327/339 (96.46%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKS +GKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELP EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELP-EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKIKPK-SSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHEN 240
           VLCRIIHKSGEKIKPK SSFQET+PSPISLPSLLLNATQSINH NIQ QPP HNIQHHEN
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQSINHNNIQFQPPPHNIQHHEN 240

Query: 241 GLESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300
           GLESFIINNPHFIFQPNLF FGL+N D HL+ XXXXXXXIQMTDTNYHPHFNPSLLLDGG
Sbjct: 241 GLESFIINNPHFIFQPNLFSFGLHNPDTHLSTXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300

Query: 301 CDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           CDSQQASSFGVDSGGTLVDVA Y GARGDQSDENWSGGC
Sbjct: 301 CDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGGC 338

[Close]

BLAST of CsGy6G017960 vs. TAIR10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-65
Identity = 117/192 (60.94%), Postives = 144/192 (75.00%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           M  +E+V+ EL  E+ +E               R LPPG+RFHPTDEELI FYLASK+F 
Sbjct: 2   MLAVEDVLSELAGEERNE---------------RGLPPGFRFHPTDEELITFYLASKIFH 61

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
                 G++I+EVDLNRCEPWELPE AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWK
Sbjct: 62  GGL--SGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWK 121

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKD+++ S   G  +G KKTLVFYKG APRG+KTKWVMHEYRL +D +  + CK +EW
Sbjct: 122 ATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCK-EEW 175

Query: 181 VLCRIIHKSGEK 193
           V+CR+ +K+G++
Sbjct: 182 VICRVFNKTGDR 175

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BLAST of CsGy6G017960 vs. TAIR10
Match: AT2G24430.1 (NAC domain containing protein 38)

HSP 1 Score: 221.5 bits (563), Expect = 8.0e-58
Identity = 105/160 (65.62%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 30  KKHHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEEAKM 89
           KK    LPPG+RFHPTDEELI++YL +K+    NF  G  IA+VDLN+ EPWELPE+AKM
Sbjct: 10  KKEEEALPPGFRFHPTDEELISYYLVNKI-ADQNF-TGKAIADVDLNKSEPWELPEKAKM 69

Query: 90  GEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGG 149
           G KEWYFFSLR RKYPTG+RTNRAT  GYWK TGKD++I +S     +G KKTLVFY+G 
Sbjct: 70  GGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGR 129

Query: 150 APRGIKTKWVMHEYRLHSDLASPNVCKQDEWVLCRIIHKS 190
           APRG KT WVMHEYRLHS  +S    KQDEWV+CR+  K+
Sbjct: 130 APRGEKTCWVMHEYRLHSK-SSYRTSKQDEWVVCRVFKKT 166

[Close]

BLAST of CsGy6G017960 vs. TAIR10
Match: AT3G15170.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 216.9 bits (551), Expect = 2.0e-56
Identity = 105/158 (66.46%), Postives = 121/158 (76.58%), Query Frame = 0


Query: 35  LLPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEW 94
           L+PPG+RFHPTDEELI +YL  KV   SNF     I++VDLN+ EPWELPE+AKMGEKEW
Sbjct: 19  LMPPGFRFHPTDEELITYYLLKKVL-DSNFSCAA-ISQVDLNKSEPWELPEKAKMGEKEW 78

Query: 95  YFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGI 154
           YFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP+G 
Sbjct: 79  YFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGE 138

Query: 155 KTKWVMHEYRLHSDLASPNVCK--QDEWVLCRIIHKSG 191
           K+ WVMHEYRL    +   +    +DEWVLC++  KSG
Sbjct: 139 KSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]

BLAST of CsGy6G017960 vs. TAIR10
Match: AT5G39610.1 (NAC domain containing protein 6)

HSP 1 Score: 210.3 bits (534), Expect = 1.8e-54
Identity = 116/240 (48.33%), Postives = 147/240 (61.25%), Query Frame = 0


Query: 26  EFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPE 85
           E +  + H  LPPG+RFHPTDEELI  YL  KVF  + F     I EVDLN+ EPW+LP 
Sbjct: 10  EMVEDEEHIDLPPGFRFHPTDEELITHYLKPKVF--NTFFSATAIGEVDLNKIEPWDLPW 69

Query: 86  EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVF 145
           +AKMGEKEWYFF +R RKYPTGLRTNRAT AGYWKATGKD++I    + V  G KKTLVF
Sbjct: 70  KAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLV--GMKKTLVF 129

Query: 146 YKGGAPRGIKTKWVMHEYRLHSDLASPNV--CKQDEWVLCRIIHKSGEKIK-PKSSFQET 205
           YKG AP+G+KT WVMHEYRL       N+    ++EWV+CR+  K  +  K P S     
Sbjct: 130 YKGRAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTKVPMSMLDPH 189

Query: 206 V--PSPISLPSLL-----LNATQSINHINIQSQPPLHN---IQHHENGLESFIINNPHFI 253
           +    P  LPSL+      + T S +H+   S     +   +   ++G  S   ++P F+
Sbjct: 190 INRMEPAGLPSLMDCSQRDSFTGSSSHVTCFSDQETEDKRLVHESKDGFGSLFYSDPLFL 245

[Close]

BLAST of CsGy6G017960 vs. TAIR10
Match: AT3G18400.1 (NAC domain containing protein 58)

HSP 1 Score: 208.8 bits (530), Expect = 5.4e-54
Identity = 111/211 (52.61%), Postives = 140/211 (66.35%), Query Frame = 0


Query: 36  LPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVN---IAEVDLNRCEPWELPEEAKMGEK 95
           LPPG+RFHPTDEELI  YL  KV      D+G     + +VDLN+CEPW+LP +A MGEK
Sbjct: 5   LPPGFRFHPTDEELITHYLCRKV-----SDIGFTGKAVVDVDLNKCEPWDLPAKASMGEK 64

Query: 96  EWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPR 155
           EWYFFS R RKYPTGLRTNRAT AGYWK TGKD++I+ S  GV +G KKTLVFYKG AP+
Sbjct: 65  EWYFFSQRDRKYPTGLRTNRATEAGYWKTTGKDKEIYRS--GVLVGMKKTLVFYKGRAPK 124

Query: 156 GIKTKWVMHEYRLHSDLASPNVCKQDEWVLCRIIHKS-----GEKIKPKSSFQETVPSPI 215
           G K+ WVMHEYRL S     N   ++EWV+CR+  KS      ++ +P+SS Q +  SP 
Sbjct: 125 GEKSNWVMHEYRLESKQPF-NPTNKEEWVVCRVFEKSTAAKKAQEQQPQSS-QPSFGSPC 184

Query: 216 SLPSLLLNATQSINHI-NIQSQPPLHNIQHH 238
              S + N  + I+ + N+ S     +  +H
Sbjct: 185 DANSSMANEFEDIDELPNLNSNSSTIDYNNH 206

[Close]

BLAST of CsGy6G017960 vs. Swiss-Prot
Match: sp|Q9S851|NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.5e-64
Identity = 117/192 (60.94%), Postives = 144/192 (75.00%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           M  +E+V+ EL  E+ +E               R LPPG+RFHPTDEELI FYLASK+F 
Sbjct: 2   MLAVEDVLSELAGEERNE---------------RGLPPGFRFHPTDEELITFYLASKIFH 61

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
                 G++I+EVDLNRCEPWELPE AKMGE+EWYF+SLR RKYPTGLRTNRAT AGYWK
Sbjct: 62  GGL--SGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWK 121

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKD+++ S   G  +G KKTLVFYKG APRG+KTKWVMHEYRL +D +  + CK +EW
Sbjct: 122 ATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCK-EEW 175

Query: 181 VLCRIIHKSGEK 193
           V+CR+ +K+G++
Sbjct: 182 VICRVFNKTGDR 175

[Close]

BLAST of CsGy6G017960 vs. Swiss-Prot
Match: sp|Q9FRV4|NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.6e-55
Identity = 105/158 (66.46%), Postives = 121/158 (76.58%), Query Frame = 0


Query: 35  LLPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEW 94
           L+PPG+RFHPTDEELI +YL  KV   SNF     I++VDLN+ EPWELPE+AKMGEKEW
Sbjct: 19  LMPPGFRFHPTDEELITYYLLKKVL-DSNFSCAA-ISQVDLNKSEPWELPEKAKMGEKEW 78

Query: 95  YFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGI 154
           YFF+LR RKYPTGLRTNRAT AGYWKATGKDR+I SS     LG KKTLVFYKG AP+G 
Sbjct: 79  YFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGE 138

Query: 155 KTKWVMHEYRLHSDLASPNVCK--QDEWVLCRIIHKSG 191
           K+ WVMHEYRL    +   +    +DEWVLC++  KSG
Sbjct: 139 KSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174

[Close]

BLAST of CsGy6G017960 vs. Swiss-Prot
Match: sp|Q9FKA0|NAC92_ARATH (NAC domain-containing protein 92 OS=Arabidopsis thaliana OX=3702 GN=NAC92 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.3e-53
Identity = 116/240 (48.33%), Postives = 147/240 (61.25%), Query Frame = 0


Query: 26  EFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPE 85
           E +  + H  LPPG+RFHPTDEELI  YL  KVF  + F     I EVDLN+ EPW+LP 
Sbjct: 10  EMVEDEEHIDLPPGFRFHPTDEELITHYLKPKVF--NTFFSATAIGEVDLNKIEPWDLPW 69

Query: 86  EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVF 145
           +AKMGEKEWYFF +R RKYPTGLRTNRAT AGYWKATGKD++I    + V  G KKTLVF
Sbjct: 70  KAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLV--GMKKTLVF 129

Query: 146 YKGGAPRGIKTKWVMHEYRLHSDLASPNV--CKQDEWVLCRIIHKSGEKIK-PKSSFQET 205
           YKG AP+G+KT WVMHEYRL       N+    ++EWV+CR+  K  +  K P S     
Sbjct: 130 YKGRAPKGVKTNWVMHEYRLEGKYCIENLPQTAKNEWVICRVFQKRADGTKVPMSMLDPH 189

Query: 206 V--PSPISLPSLL-----LNATQSINHINIQSQPPLHN---IQHHENGLESFIINNPHFI 253
           +    P  LPSL+      + T S +H+   S     +   +   ++G  S   ++P F+
Sbjct: 190 INRMEPAGLPSLMDCSQRDSFTGSSSHVTCFSDQETEDKRLVHESKDGFGSLFYSDPLFL 245

[Close]

BLAST of CsGy6G017960 vs. Swiss-Prot
Match: sp|O04017|NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.2e-52
Identity = 100/156 (64.10%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 36  LPPGYRFHPTDEELIAFYLASKVFKPSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWY 95
           LPPG+RFHPTDEELI  YL  KV           IAEVDLN+CEPW+LP  AKMGEKEWY
Sbjct: 17  LPPGFRFHPTDEELITHYLLRKVLDGCFSSRA--IAEVDLNKCEPWQLPGRAKMGEKEWY 76

Query: 96  FFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIK 155
           FFSLR RKYPTGLRTNRAT AGYWKATGKDR+I SS     +G KKTLVFYKG AP+G K
Sbjct: 77  FFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEK 136

Query: 156 TKWVMHEYRLHSDLASPNVCK--QDEWVLCRIIHKS 190
           + WVMHEYRL    +   + +  +DEWV+ R+  K+
Sbjct: 137 SNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQKT 170

[Close]

BLAST of CsGy6G017960 vs. Swiss-Prot
Match: sp|Q9FLR3|NAC79_ARATH (NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.7e-52
Identity = 109/195 (55.90%), Postives = 132/195 (67.69%), Query Frame = 0


Query: 6   EVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFKPSNFD 65
           E  G  ++EDD +                 LPPG+RFHPTDEELI  YL  KV      D
Sbjct: 2   ETFGVFHKEDDEQMD---------------LPPGFRFHPTDEELITHYLHKKV-----LD 61

Query: 66  LGVN---IAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKAT 125
           LG +   I EVDLN+ EPWELP +AK+GEKEWYFF +R RKYPTGLRTNRAT AGYWKAT
Sbjct: 62  LGFSAKAIGEVDLNKAEPWELPYKAKIGEKEWYFFCVRDRKYPTGLRTNRATQAGYWKAT 121

Query: 126 GKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCK--QDEW 185
           GKD++I    + V  G KKTLVFY+G AP+G KT WVMHEYRL   L++ N+ K  ++EW
Sbjct: 122 GKDKEIFRGKSLV--GMKKTLVFYRGRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEW 174

Query: 186 VLCRIIHKS--GEKI 194
           V+CR+ HK+  G+KI
Sbjct: 182 VICRVFHKTAGGKKI 174

[Close]

BLAST of CsGy6G017960 vs. TrEMBL
Match: tr|A0A0A0KFF1|A0A0A0KFF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355380 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 1.1e-194
Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCK DEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCK-DEW 180

Query: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240
           VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG
Sbjct: 181 VLCRIIHKSGEKIKPKSSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHENG 240

Query: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300
           LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC
Sbjct: 241 LESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGGC 300

Query: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC
Sbjct: 301 DSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 337

[Close]

BLAST of CsGy6G017960 vs. TrEMBL
Match: tr|A0A1S3CMC2|A0A1S3CMC2_CUCME (protein CUP-SHAPED COTYLEDON 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502608 PE=4 SV=1)

HSP 1 Score: 660.2 bits (1702), Expect = 2.5e-186
Identity = 324/339 (95.58%), Postives = 328/339 (96.76%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKS +GKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKIKPK-SSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHEN 240
           VLCRIIHKSGEKIKPK SSFQET+PSPISLPSLLLNATQSINH NIQ QPP HNIQHHEN
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQSINHNNIQFQPPPHNIQHHEN 240

Query: 241 GLESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300
           GLESFIINNPHFIFQPNLF FGL+N D HL+ XXXXXXXIQMTDTNYHPHFNPSLLLDGG
Sbjct: 241 GLESFIINNPHFIFQPNLFSFGLHNPDTHLSTXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300

Query: 301 CDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           CDSQQASSFGVDSGGTLVDVA Y GARGDQSDENWSGGC
Sbjct: 301 CDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGGC 339

[Close]

BLAST of CsGy6G017960 vs. TrEMBL
Match: tr|A0A1S3CMV9|A0A1S3CMV9_CUCME (protein CUP-SHAPED COTYLEDON 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103502608 PE=4 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 1.8e-184
Identity = 323/339 (95.28%), Postives = 327/339 (96.46%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKS +GKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELP EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELP-EAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180

Query: 181 VLCRIIHKSGEKIKPK-SSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHEN 240
           VLCRIIHKSGEKIKPK SSFQET+PSPISLPSLLLNATQSINH NIQ QPP HNIQHHEN
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQSINHNNIQFQPPPHNIQHHEN 240

Query: 241 GLESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300
           GLESFIINNPHFIFQPNLF FGL+N D HL+ XXXXXXXIQMTDTNYHPHFNPSLLLDGG
Sbjct: 241 GLESFIINNPHFIFQPNLFSFGLHNPDTHLSTXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300

Query: 301 CDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           CDSQQASSFGVDSGGTLVDVA Y GARGDQSDENWSGGC
Sbjct: 301 CDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGGC 338

[Close]

BLAST of CsGy6G017960 vs. TrEMBL
Match: tr|A0A1S3CMG2|A0A1S3CMG2_CUCME (protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502608 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 2.3e-184
Identity = 323/339 (95.28%), Postives = 327/339 (96.46%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           MFGIEEVIGELNREDDHEEKS +GKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK
Sbjct: 1   MFGIEEVIGELNREDDHEEKSDNGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
           PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK
Sbjct: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCK DEW
Sbjct: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCK-DEW 180

Query: 181 VLCRIIHKSGEKIKPK-SSFQETVPSPISLPSLLLNATQSINHINIQSQPPLHNIQHHEN 240
           VLCRIIHKSGEKIKPK SSFQET+PSPISLPSLLLNATQSINH NIQ QPP HNIQHHEN
Sbjct: 181 VLCRIIHKSGEKIKPKSSSFQETIPSPISLPSLLLNATQSINHNNIQFQPPPHNIQHHEN 240

Query: 241 GLESFIINNPHFIFQPNLFPFGLNNHDPHLTXXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300
           GLESFIINNPHFIFQPNLF FGL+N D HL+ XXXXXXXIQMTDTNYHPHFNPSLLLDGG
Sbjct: 241 GLESFIINNPHFIFQPNLFSFGLHNPDTHLSTXXXXXXXIQMTDTNYHPHFNPSLLLDGG 300

Query: 301 CDSQQASSFGVDSGGTLVDVAAYRGARGDQSDENWSGGC 339
           CDSQQASSFGVDSGGTLVDVA Y GARGDQSDENWSGGC
Sbjct: 301 CDSQQASSFGVDSGGTLVDVAGYGGARGDQSDENWSGGC 338

[Close]

BLAST of CsGy6G017960 vs. TrEMBL
Match: tr|A0A1Q3BD03|A0A1Q3BD03_CEPFO (NAM domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_09352 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.7e-70
Identity = 156/278 (56.12%), Postives = 185/278 (66.55%), Query Frame = 0


Query: 1   MFGIEEVIGELNREDDHEEKSGSGKEFIIKKHHRLLPPGYRFHPTDEELIAFYLASKVFK 60
           M  +EE++ ELN E+ +E+                LPPG+RFHPTDEELI FYLASKVF 
Sbjct: 1   MLAVEELLCELNGEEVNEQG---------------LPPGFRFHPTDEELITFYLASKVFN 60

Query: 61  PSNFDLGVNIAEVDLNRCEPWELPEEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWK 120
             NF  G+ IAEVDLNRCEPWELP+ AKMGE+EWYFFSLR RKYPTGLRTNRAT AGYWK
Sbjct: 61  -GNF-CGIEIAEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWK 120

Query: 121 ATGKDRQIHSSCNGVKLGTKKTLVFYKGGAPRGIKTKWVMHEYRLHSDLASPNVCKQDEW 180
           ATGKDR+++S+ NG  LG KKTLVFYKG APRG KTKWVMHEYRL  D +  + CK +EW
Sbjct: 121 ATGKDREVYSATNGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHTCK-EEW 180

Query: 181 VLCRIIHKSGEK----IKPKSSFQETVPSPI--SLPSLLLNATQSINHINIQSQPPLHN- 240
           V+CRI HK+G+K    +K +S   E   SP   SLP LL   T  ++  +  S+  L N 
Sbjct: 181 VICRIFHKTGDKKNGHVKGQSYLLEAASSPANSSLPPLLETPTTILDCHSQSSRQELQNQ 240

Query: 241 ----IQHHENGLESFIINNPHFIFQPNLFPFGLNNHDP 268
               I H EN L+S I  NP  + Q  LFP  +N   P
Sbjct: 241 NPFLIPHQENDLKSLI--NP-VVSQSLLFP--MNGFQP 255

The following BLAST results are available for this feature:

BLAST of CsGy6G017960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657330.1	1.8e-196	100.00	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis sativus]	[more]
XP_011657331.1	1.3e-194	99.70	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis sativus]	[more]
XP_004144293.1	1.7e-194	99.70	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X2 [Cucumis sativus] >KGN47519...	[more]
XP_008464816.1	3.7e-186	95.58	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X1 [Cucumis melo]	[more]
XP_008464818.1	2.7e-184	95.28	PREDICTED: protein CUP-SHAPED COTYLEDON 3 isoform X3 [Cucumis melo]	[more]

BLAST of CsGy6G017960 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76420.1	1.4e-65	60.94	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT2G24430.1	8.0e-58	65.63	NAC domain containing protein 38	[more]
AT3G15170.1	2.0e-56	66.46	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G39610.1	1.8e-54	48.33	NAC domain containing protein 6	[more]
AT3G18400.1	5.4e-54	52.61	NAC domain containing protein 58	[more]

BLAST of CsGy6G017960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9S851\|NAC31_ARATH	2.5e-64	60.94	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV...	[more]
sp\|Q9FRV4\|NAC54_ARATH	3.6e-55	66.46	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV...	[more]
sp\|Q9FKA0\|NAC92_ARATH	3.3e-53	48.33	NAC domain-containing protein 92 OS=Arabidopsis thaliana OX=3702 GN=NAC92 PE=1 S...	[more]
sp\|O04017\|NAC98_ARATH	2.2e-52	64.10	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV...	[more]
sp\|Q9FLR3\|NAC79_ARATH	3.7e-52	55.90	NAC domain-containing protein 79 OS=Arabidopsis thaliana OX=3702 GN=NAC079 PE=2 ...	[more]

BLAST of CsGy6G017960 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KFF1\|A0A0A0KFF1_CUCSA	1.1e-194	99.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G355380 PE=4 SV=1	[more]
tr\|A0A1S3CMC2\|A0A1S3CMC2_CUCME	2.5e-186	95.58	protein CUP-SHAPED COTYLEDON 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10350260...	[more]
tr\|A0A1S3CMV9\|A0A1S3CMV9_CUCME	1.8e-184	95.28	protein CUP-SHAPED COTYLEDON 3 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10350260...	[more]
tr\|A0A1S3CMG2\|A0A1S3CMG2_CUCME	2.3e-184	95.28	protein CUP-SHAPED COTYLEDON 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350260...	[more]
tr\|A0A1Q3BD03\|A0A1Q3BD03_CEPFO	1.7e-70	56.12	NAM domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_0935...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR036093	NAC_dom_sf
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G017960.1	CsGy6G017960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 37..165 e-value: 4.1E-34 score: 118.0
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 36..188 score: 55.678
IPR036093	NAC domain superfamily	GENE3D	G3DSA:3.30.310.150		coord: 45..193 e-value: 2.3E-54 score: 185.3
IPR036093	NAC domain superfamily	SUPERFAMILY	SSF101941	NAC domain	coord: 33..188
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 30..239
None	No IPR available	PANTHER	PTHR31744:SF50	SUBFAMILY NOT NAMED	coord: 30..239

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G017960	Cla021917	Watermelon (97103) v1	cgybwmB427
CsGy6G017960	Csa6G355380	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G017960	MELO3C026521	Melon (DHL92) v3.5.1	cgybmeB406
CsGy6G017960	ClCG08G009220	Watermelon (Charleston Gray)	cgybwcgB454
CsGy6G017960	CSPI06G18460	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G017960	CmaCh12G006920	Cucurbita maxima (Rimu)	cgybcmaB718
CsGy6G017960	CmaCh05G009650	Cucurbita maxima (Rimu)	cgybcmaB845
CsGy6G017960	CmoCh05G009840	Cucurbita moschata (Rifu)	cgybcmoB826
CsGy6G017960	CmoCh12G006270	Cucurbita moschata (Rifu)	cgybcmoB702
CsGy6G017960	Lsi08G007710	Bottle gourd (USVL1VR-Ls)	cgyblsiB437
CsGy6G017960	Cp4.1LG07g05720	Cucurbita pepo (Zucchini)	cgybcpeB879
CsGy6G017960	Cp4.1LG11g07710	Cucurbita pepo (Zucchini)	cgybcpeB715
CsGy6G017960	MELO3C026521.2	Melon (DHL92) v3.6.1	cgybmedB405
CsGy6G017960	CsaV3_6G031350	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G017960	Cla97C08G152050	Watermelon (97103) v2	cgybwmbB463
CsGy6G017960	Bhi04G000958	Wax gourd	cgybwgoB551
CsGy6G017960	Carg21892	Silver-seed gourd	carcgybB0225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None