Lsi07G001370 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G001370
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Tyrosine--tRNA ligase
Location	chr07 : 1493925 .. 1495397 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCATTGTTGCTTCTTCTTCCTCTTCTTGTTATGGCTCCAGAGCCTTCCTTCTTTCTCAACGATCCTTCTTCTTCTCCAAACCCTCTTTCTCCTTCTTCCTCAAAACCACTTCCCGGTGCTTCGCTTCTTCCTCTCCAACTTCTCTTCAATCTTCAACTCTCCACCCTCCAACCCCTTCTCCGCCTAACGTCGTCCAAATTCTCGAACAACGCGGCCTTCTCGACTCCATCACCAGCGACAATCTCCGCTCCGCTTGTCTCACCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACCGCCCAGAGCTTACATTTAGGTAATCTTCTTGGTCTCATTGTTCTCTCTTGGTTCCGCCGATGTGGCCACACCACCGTCGCTCTCATTGGCGGTGCCACTGCCCGCGTCGGCGACCCCTCGGGCAAGAGCCTCGAGCGCCCCGAACTCGATCTCCAGACCTTGGAGGCTAATACTCTCGGAATTACTAATATTATCACTAGAATTTTGGGGAATTCGGTCTCGGATTCTAATTTTTGCCCTAATTTTGTGATTCTTAATAATTATGATTGGTGGAAAGAGTTTAGGTTTCTGGATTTCTTGAAAGAAGTGGGTCGGTTTGCGAGAGTGGGACAGATGATGGCTAAGGAGAGTGTTAGGAGGAGATTGGAATCGGAGCAAGGAATGAGCTATACTGAGTTCACTTACCAGCTCTTGCAGGGATATGATTTTCTTCATCTCTATCAAAACGAGGGCGTTTCTGTTCAGATTGGAGGTAGTGATCAATGGGGGAATATCACTGCAGGGACAGAGCTAATTAGAAAACGTTTGCCTGATGCTGATGGCATTTACGGTTTAACATTCCCTCTTCTTCTGAAGAGTGATGGCACCAAATTTGGCAAATCCGAAGACGGCGCTATTTGGCTTTCGCCATTGATGTTATCTCCATACAAGTTCTATCAATATTTCTTCAGTGTCCCTGATGCTGATGTGGTGAGATTTCTCAGAATTCTCACATTTTTGGATATTAAGGAGATTCAGGACTTGGAAAGCCAAATGGCAGAACCTGGGTATGTGCCGAACACGGCGCAGAGGCGGCTGGCTGAAGAAGTTACTCGGTTTGTTCATGGAGAAGATGGTTTGAGTGAGGCCCTGAAGGCCACTGAAGCATTGAAACCAGGTGCAGAGACAAAGTTGGATTGGAAGACTATCGAGGGCATTGCTGAGGATGTTCCATGCTGCTCATTGGAGTATGATCAAGTGTTGAATCTTTCGGTTGTTGATCTTTCAGTTATGTCTGGTTTGCTCGAAAGCAAGTCGGCTGCCCGTCGTTTGCTGAAACAAGGGGGACTTTATTTGAATAATAGTAGAGTGGATTCTGAGAGTAAAAGAGTTGAAGCTGTAGACATTGTTGATGGAAAAATTCTACTTTTATCTGCAGGAAAGAAGAACAAGGTGGTTGTAAGGATATCATAA

mRNA sequence

ATGGTCATTGTTGCTTCTTCTTCCTCTTCTTGTTATGGCTCCAGAGCCTTCCTTCTTTCTCAACGATCCTTCTTCTTCTCCAAACCCTCTTTCTCCTTCTTCCTCAAAACCACTTCCCGGTGCTTCGCTTCTTCCTCTCCAACTTCTCTTCAATCTTCAACTCTCCACCCTCCAACCCCTTCTCCGCCTAACGTCGTCCAAATTCTCGAACAACGCGGCCTTCTCGACTCCATCACCAGCGACAATCTCCGCTCCGCTTGTCTCACCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACCGCCCAGAGCTTACATTTAGGTAATCTTCTTGGTCTCATTGTTCTCTCTTGGTTCCGCCGATGTGGCCACACCACCGTCGCTCTCATTGGCGGTGCCACTGCCCGCGTCGGCGACCCCTCGGGCAAGAGCCTCGAGCGCCCCGAACTCGATCTCCAGACCTTGGAGGCTAATACTCTCGGAATTACTAATATTATCACTAGAATTTTGGGGAATTCGGTCTCGGATTCTAATTTTTGCCCTAATTTTGTGATTCTTAATAATTATGATTGGTGGAAAGAGTTTAGGTTTCTGGATTTCTTGAAAGAAGTGGGTCGGTTTGCGAGAGTGGGACAGATGATGGCTAAGGAGAGTGTTAGGAGGAGATTGGAATCGGAGCAAGGAATGAGCTATACTGAGTTCACTTACCAGCTCTTGCAGGGATATGATTTTCTTCATCTCTATCAAAACGAGGGCGTTTCTGTTCAGATTGGAGGTAGTGATCAATGGGGGAATATCACTGCAGGGACAGAGCTAATTAGAAAACGTTTGCCTGATGCTGATGGCATTTACGGTTTAACATTCCCTCTTCTTCTGAAGAGTGATGGCACCAAATTTGGCAAATCCGAAGACGGCGCTATTTGGCTTTCGCCATTGATGTTATCTCCATACAAGTTCTATCAATATTTCTTCAGTGTCCCTGATGCTGATGTGGTGAGATTTCTCAGAATTCTCACATTTTTGGATATTAAGGAGATTCAGGACTTGGAAAGCCAAATGGCAGAACCTGGGTATGTGCCGAACACGGCGCAGAGGCGGCTGGCTGAAGAAGTTACTCGGTTTGTTCATGGAGAAGATGGTTTGAGTGAGGCCCTGAAGGCCACTGAAGCATTGAAACCAGGTGCAGAGACAAAGTTGGATTGGAAGACTATCGAGGGCATTGCTGAGGATGTTCCATGCTGCTCATTGGAGTATGATCAAGTGTTGAATCTTTCGGTTGTTGATCTTTCAGTTATGTCTGGTTTGCTCGAAAGCAAGTCGGCTGCCCGTCGTTTGCTGAAACAAGGGGGACTTTATTTGAATAATAGTAGAGTGGATTCTGAGAGTAAAAGAGTTGAAGCTGTAGACATTGTTGATGGAAAAATTCTACTTTTATCTGCAGGAAAGAAGAACAAGGTGGTTGTAAGGATATCATAA

Coding sequence (CDS)

ATGGTCATTGTTGCTTCTTCTTCCTCTTCTTGTTATGGCTCCAGAGCCTTCCTTCTTTCTCAACGATCCTTCTTCTTCTCCAAACCCTCTTTCTCCTTCTTCCTCAAAACCACTTCCCGGTGCTTCGCTTCTTCCTCTCCAACTTCTCTTCAATCTTCAACTCTCCACCCTCCAACCCCTTCTCCGCCTAACGTCGTCCAAATTCTCGAACAACGCGGCCTTCTCGACTCCATCACCAGCGACAATCTCCGCTCCGCTTGTCTCACCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACCGCCCAGAGCTTACATTTAGGTAATCTTCTTGGTCTCATTGTTCTCTCTTGGTTCCGCCGATGTGGCCACACCACCGTCGCTCTCATTGGCGGTGCCACTGCCCGCGTCGGCGACCCCTCGGGCAAGAGCCTCGAGCGCCCCGAACTCGATCTCCAGACCTTGGAGGCTAATACTCTCGGAATTACTAATATTATCACTAGAATTTTGGGGAATTCGGTCTCGGATTCTAATTTTTGCCCTAATTTTGTGATTCTTAATAATTATGATTGGTGGAAAGAGTTTAGGTTTCTGGATTTCTTGAAAGAAGTGGGTCGGTTTGCGAGAGTGGGACAGATGATGGCTAAGGAGAGTGTTAGGAGGAGATTGGAATCGGAGCAAGGAATGAGCTATACTGAGTTCACTTACCAGCTCTTGCAGGGATATGATTTTCTTCATCTCTATCAAAACGAGGGCGTTTCTGTTCAGATTGGAGGTAGTGATCAATGGGGGAATATCACTGCAGGGACAGAGCTAATTAGAAAACGTTTGCCTGATGCTGATGGCATTTACGGTTTAACATTCCCTCTTCTTCTGAAGAGTGATGGCACCAAATTTGGCAAATCCGAAGACGGCGCTATTTGGCTTTCGCCATTGATGTTATCTCCATACAAGTTCTATCAATATTTCTTCAGTGTCCCTGATGCTGATGTGGTGAGATTTCTCAGAATTCTCACATTTTTGGATATTAAGGAGATTCAGGACTTGGAAAGCCAAATGGCAGAACCTGGGTATGTGCCGAACACGGCGCAGAGGCGGCTGGCTGAAGAAGTTACTCGGTTTGTTCATGGAGAAGATGGTTTGAGTGAGGCCCTGAAGGCCACTGAAGCATTGAAACCAGGTGCAGAGACAAAGTTGGATTGGAAGACTATCGAGGGCATTGCTGAGGATGTTCCATGCTGCTCATTGGAGTATGATCAAGTGTTGAATCTTTCGGTTGTTGATCTTTCAGTTATGTCTGGTTTGCTCGAAAGCAAGTCGGCTGCCCGTCGTTTGCTGAAACAAGGGGGACTTTATTTGAATAATAGTAGAGTGGATTCTGAGAGTAAAAGAGTTGAAGCTGTAGACATTGTTGATGGAAAAATTCTACTTTTATCTGCAGGAAAGAAGAACAAGGTGGTTGTAAGGATATCATAA

Protein sequence

MVIVASSSSSCYGSRAFLLSQRSFFFSKPSFSFFLKTTSRCFASSSPTSLQSSTLHPPTPSPPNVVQILEQRGLLDSITSDNLRSACLTPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSDSNFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAGKKNKVVVRIS

Homology

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BLAST of Lsi07G001370 vs. Swiss-Prot
Match: SYYM_ARATH (Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=EMB2768 PE=2 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 4.7e-186
Identity = 348/509 (68.37%), Postives = 400/509 (78.59%), Query Frame = 1


Query: 2   VIVASSSSSCYGSRAFLLSQRS----FFFSKPSFSFFLKTTSRCFASSSPTSLQSS---T 61
           +  AS S     SR FL   R      F  K S +FF +       S+S T+L SS   +
Sbjct: 7   ITFASRSILPICSRTFLSPLRVASLLVFPEKSSATFFRRVQVPHLFSTSTTTLFSSVKCS 66

Query: 62  LHPPTPSP---------PNVVQILEQRGLLDSITSDNLRSAC----LTPLKVYCGFDPTA 121
           +H  T SP         PNVV ILE+RGLL+SITS+NLRSAC    + PL+VYCGFDPTA
Sbjct: 67  IHS-TSSPETENQAVFRPNVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTA 126

Query: 122 QSLHLGNLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGI 181
           +SLHLGNLLG+IVLSWF+RCGH  V LIGGAT RVGDPSGKSLERPELD  TLE N  GI
Sbjct: 127 ESLHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGI 186

Query: 182 TNIITRILGNSVSDSNFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRR 241
           T II +ILG++ S      ++VI NNYDWWK+   LDFL +VGRFARVG MMAKESV++R
Sbjct: 187 TKIIIKILGSNPSPGG---SYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKR 246

Query: 242 LESEQGMSYTEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADG 301
           LESEQGMSYTEFTYQLLQ YDFLHL++NEG++VQIGGSDQWGNITAGT+LIRK L   + 
Sbjct: 247 LESEQGMSYTEFTYQLLQAYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEA 306

Query: 302 IYGLTFPLLLKSDGTKFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLD 361
            YGLTFPLLLK+DGTKFGKSEDGAIWLSP MLSPYKFYQYFFSVPD DV+RFL+ LTFL 
Sbjct: 307 AYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLS 366

Query: 362 IKEIQDLESQMAEPGYVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWK 421
           + EI+ LE QM++PGYVPNTAQ +LAEEVTRFVHGE+GL EA+KATEAL+PGAETKLDW 
Sbjct: 367 LDEIKILEDQMSKPGYVPNTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWN 426

Query: 422 TIEGIAEDVPCCSLEYDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSES 481
            IE IAED+P CSL  D+V  LS+VDLSV +GL ESKSAARR+LKQGG Y+NN RVD E+
Sbjct: 427 LIERIAEDIPSCSLPIDRVSGLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDEN 486

Query: 482 KRVEAVDIVDGKILLLSAGKKNKVVVRIS 491
           KRV+  DIV+G+ L+LSAGKKNKVVVRIS
Sbjct: 487 KRVDEEDIVEGRGLVLSAGKKNKVVVRIS 511

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BLAST of Lsi07G001370 vs. Swiss-Prot
Match: SYY_PARUW (Tyrosine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25) GN=tyrS PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 7.4e-131
Identity = 226/427 (52.93%), Postives = 312/427 (73.07%), Query Frame = 1


Query: 64  NVVQILEQRGLLDSITSDNLRSACLTPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGH 123
           NV+ +L +RG +D++TS+ +R     P+KVYCGFDPTA SLHLGNL+ ++ L+WF+R GH
Sbjct: 3   NVMDVLRERGFIDAVTSEEIRQLTNQPIKVYCGFDPTADSLHLGNLVAIMGLAWFQRFGH 62

Query: 124 TTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSDSNF-CPNF 183
           T VA++GGAT  +GDPSGK+ ER  LD + ++ N  GI+  +  IL     D N      
Sbjct: 63  TPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAIL-----DFNHPTAPA 122

Query: 184 VILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGYD 243
           +ILNN DW+K F F+ FL++VG+  R+  M+AK+SV+ RL SE+GMS+TEF YQ+LQGYD
Sbjct: 123 IILNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYD 182

Query: 244 FLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKSE 303
           FLHL++N GV+V++GGSDQWGNITAGT+LIRK    A   YG+TFPLL KSDG KFGKSE
Sbjct: 183 FLHLFENYGVTVELGGSDQWGNITAGTDLIRK--VHAKPAYGITFPLLTKSDGQKFGKSE 242

Query: 304 DGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNTA 363
            GA+WLSP  LS Y+FYQ+   V DADV+  +R+LTFLD+ EI+  E  M E  YVP TA
Sbjct: 243 KGAVWLSPDKLSSYEFYQHLIRVEDADVINLMRMLTFLDMGEIRHYEQMMKEADYVPRTA 302

Query: 364 QRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLN 423
           Q+RLAEE+TR VHGE+GL  A+K TE + PG++T L+   +E +A D+P C ++ + VLN
Sbjct: 303 QKRLAEEITRLVHGEEGLKIAIKVTEGVAPGSQTSLNADILEKLAADMPSCEMKLENVLN 362

Query: 424 LSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAGKK 483
             ++DL V + L  SKS ARRLL+ GG+Y+NN +++ E+  +    ++  +++LL+AGKK
Sbjct: 363 KKLIDLLVETKLQTSKSEARRLLRNGGVYINNKKIEDENHIISVECLISSRLILLAAGKK 422

Query: 484 NKVVVRI 490
           NK+++R+
Sbjct: 423 NKMIIRL 422

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BLAST of Lsi07G001370 vs. Swiss-Prot
Match: SYY_BACFR (Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain YCH46) GN=tyrS PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.2e-92
Identity = 194/433 (44.80%), Postives = 269/433 (62.12%), Query Frame = 1


Query: 64  NVVQILEQRGLLDSITSDNLRSACLTPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGH 123
           N V+ L  RG++  +            +  Y G DPTA SLH+G+L G+++L  F+RCGH
Sbjct: 2   NFVEELRWRGMVHDMMPGTEELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGH 61

Query: 124 TTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSDSNFCPNFV 183
             +ALIGGAT  +GDPSGKS ER  LD +TL  N   I   + + L +  SD+   PN  
Sbjct: 62  KPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFL-DFESDA---PNRA 121

Query: 184 -ILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRL--ESEQGMSYTEFTYQLLQG 243
            ++NNYDW KEF FLDF +EVG+   V  MMAKESV++RL  E+  G+S+TEFTYQLLQG
Sbjct: 122 ELVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQG 181

Query: 244 YDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGK 303
           YDFLHLY+ +G  +Q+GGSDQWGNIT GTELIR+   +    Y LT PL+ K+DG KFGK
Sbjct: 182 YDFLHLYETKGCKLQMGGSDQWGNITTGTELIRR--TNGGEAYALTCPLITKADGGKFGK 241

Query: 304 SEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPN 363
           +E G IWL P   SPYKFYQ++ +V DAD  R+++I T LD  EI  L ++  E  ++  
Sbjct: 242 TESGNIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLVAEHNEAPHL-R 301

Query: 364 TAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAET----KLDWKTIEGIAEDVPCCSLE 423
             Q+RLA+EVT  VH E+  + A+ A+  L   A +    KLD  T+  + E VP   + 
Sbjct: 302 VLQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEIS 361

Query: 424 YDQVL-NLSVVDLSV-MSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKI 483
            D ++  +  VDL V  + +  SK   R+L++ GG+ LN  ++ +  + +   D++D K 
Sbjct: 362 RDALVEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKY 421

Query: 484 LLLSAGKKNKVVV 488
           LL+  GKKN  ++
Sbjct: 422 LLVQRGKKNYYLI 427

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BLAST of Lsi07G001370 vs. Swiss-Prot
Match: SYY_ROSS1 (Tyrosine--tRNA ligase OS=Roseiflexus sp. (strain RS-1) GN=tyrS PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.8e-92
Identity = 189/429 (44.06%), Postives = 270/429 (62.94%), Query Frame = 1


Query: 65  VVQILEQRGLLDSITSDNLRSACLTPLKV--YCGFDPTAQSLHLGNLLGLIVLSWFRRCG 124
           ++  L  RGLL   +SD L    LT  +V  Y GFDP+A SLH+G+LL L+ L+ F+R G
Sbjct: 4   ILDELRWRGLLYE-SSDGL-DELLTRERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWG 63

Query: 125 HTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSDSNFCPNF 184
           HT +AL GG T  +GDPSGK+ ERP L  + + AN   I   + + L  +  D +     
Sbjct: 64  HTPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKGQLAQFLDFNAGDHSA---- 123

Query: 185 VILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGYD 244
           ++LNN DW      +DFL++VG+   V  M+AK+SVR R+ SE G+S+TEF+Y LLQ YD
Sbjct: 124 LLLNNADWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMTSETGISFTEFSYMLLQAYD 183

Query: 245 FLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKSE 304
           F +L+++ G  +Q GGSDQWGNITAG ELIR+ L      YGL +PL+ K+DGTKFGK+E
Sbjct: 184 FAYLFEHYGCKLQAGGSDQWGNITAGIELIRRTL--GQKAYGLVYPLVTKADGTKFGKTE 243

Query: 305 DGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNTA 364
            GA+WL P   SPY+FYQ++++V DADV ++LR  T+L   EI++LE   A       TA
Sbjct: 244 SGAVWLDPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSADEIEELERITASQP-ERRTA 303

Query: 365 QRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVL- 424
           Q+RLA EVTR VHGE  L+ A +A++AL  G+  +L    +  I EDVP  +L       
Sbjct: 304 QQRLAREVTRMVHGETALARAEEASQALFGGSLARLSAGDVIDIFEDVPSTTLPRQDFEG 363

Query: 425 -NLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAG 484
               ++D+ +  G+  SKS ARR ++ GG+Y+NN +     +R+   D +DG+ ++L  G
Sbjct: 364 DGFPLIDVLLRCGIATSKSDARRTIEGGGIYVNNIQCPDVGRRLTLNDSIDGQFIVLRKG 423

Query: 485 KKNKVVVRI 490
           +K   +V++
Sbjct: 424 RKQYHLVKV 423

[Close]

BLAST of Lsi07G001370 vs. Swiss-Prot
Match: SYY_BACFN (Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) GN=tyrS PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.2e-91
Identity = 194/433 (44.80%), Postives = 268/433 (61.89%), Query Frame = 1


Query: 64  NVVQILEQRGLLDSITSDNLRSACLTPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGH 123
           N V+ L  RG++  +            +  Y G DPTA SLH+G+L G+++L  F+RCGH
Sbjct: 2   NFVEELRWRGMVHDMMPGTEELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGH 61

Query: 124 TTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSDSNFCPNFV 183
             +ALIGGAT  +GDPSGKS ER  LD +TL  N   I   + + L +  SD+   PN  
Sbjct: 62  KPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFL-DFESDA---PNRA 121

Query: 184 -ILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRL--ESEQGMSYTEFTYQLLQG 243
            ++NNYDW KEF FLDF +EVG+   V  MMAKESV++RL  E+  G+S+TEFTYQLLQG
Sbjct: 122 ELVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQG 181

Query: 244 YDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGK 303
           YDFLHLY+ +G  +Q+GGSDQWGNIT GTELIR+   +    Y LT PL+ K+DG KFGK
Sbjct: 182 YDFLHLYETKGCKLQMGGSDQWGNITTGTELIRR--TNGGEAYALTCPLITKADGGKFGK 241

Query: 304 SEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPN 363
           +E G IWL P   SPYKFYQ++ +V DAD  R+++I T LD  EI  L ++  E  ++  
Sbjct: 242 TESGNIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLIAEHNEAPHL-R 301

Query: 364 TAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAET----KLDWKTIEGIAEDVPCCSLE 423
             Q+RLA+EVT  VH E+  + A+ A+  L   A +    KLD  T+  + E VP   + 
Sbjct: 302 VLQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEIS 361

Query: 424 YDQVL-NLSVVDLSV-MSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKI 483
            D +   +  VDL V  + +  SK   R+L++ GG+ LN  ++ +  + +   D++D K 
Sbjct: 362 RDALAEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKY 421

Query: 484 LLLSAGKKNKVVV 488
           LL+  GKKN  ++
Sbjct: 422 LLVQRGKKNYYLI 427

[Close]

BLAST of Lsi07G001370 vs. TrEMBL
Match: A0A0A0KU70_CUCSA (Tyrosine--tRNA ligase OS=Cucumis sativus GN=Csa_4G025150 PE=3 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 2.6e-252
Identity = 455/495 (91.92%), Postives = 468/495 (94.55%), Query Frame = 1


Query: 1   MVIVASSSSSCYGSRAFLLSQRSFFFS----KPSFSFFLKTTSRCFASSSPTSLQSSTLH 60
           M I ASSSSSCY S+AFLLSQRSFFFS    KPS SFF K TSR F+SSSPTSL  S   
Sbjct: 3   MAIFASSSSSCYTSKAFLLSQRSFFFSTISSKPSSSFFFKPTSRFFSSSSPTSLHYS--- 62

Query: 61  PPTPSPP-NVVQILEQRGLLDSITSDNLRSACLTPLKVYCGFDPTAQSLHLGNLLGLIVL 120
            PTPSPP NV+QILEQRGLLDSITSDNLRSA L+PLKVYCGFDPTAQSLHLGNLLGLIVL
Sbjct: 63  -PTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVL 122

Query: 121 SWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSD 180
           SWFRRCGH+TVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIIT+ILGNS SD
Sbjct: 123 SWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSD 182

Query: 181 SNFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTY 240
           S+FCPNFVILNNYDWWKEFRFLDFLK+VGRFARVG M+AKESVRRRLESEQGMSYTEFTY
Sbjct: 183 SDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTY 242

Query: 241 QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDG 300
           QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLP ADG+YGLTFPLLLKSDG
Sbjct: 243 QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLLLKSDG 302

Query: 301 TKFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEP 360
           TKFGKSEDGAIWLSP MLSPYKFYQYFFSVPDADVVRFLRILTFLDI+EIQDLESQM +P
Sbjct: 303 TKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMMKP 362

Query: 361 GYVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSL 420
           GYVPNTAQRRLAEEVTRFVHGEDGL EALKATEALKPGAETKLDWKTIEGIAEDVPCCSL
Sbjct: 363 GYVPNTAQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSL 422

Query: 421 EYDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKIL 480
           EYDQVLNLSVVDLSV SGLLESKSAARRLLKQGGLYLNN RVDSESKRVEAVDIVDGK+L
Sbjct: 423 EYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIVDGKVL 482

Query: 481 LLSAGKKNKVVVRIS 491
           LLSAGKKNKVVVRIS
Sbjct: 483 LLSAGKKNKVVVRIS 493

[Close]

BLAST of Lsi07G001370 vs. TrEMBL
Match: K7M864_SOYBN (Tyrosine--tRNA ligase OS=Glycine max GN=GLYMA_14G202100 PE=3 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 8.9e-200
Identity = 371/483 (76.81%), Postives = 404/483 (83.64%), Query Frame = 1


Query: 22  RSFFFSKPSFSFF--LKTTSRCFASSSPTSLQSSTLHPPTPSPP------NVVQILEQRG 81
           RS  F+  +  FF   K +S  F     T    STL      P       NV+ ILE+RG
Sbjct: 9   RSLLFTHTTKCFFRPFKPSSSPFPLHCATKTTCSTLQQQQQQPRRNNSNNNVIGILEERG 68

Query: 82  LLDSITSDNLRSACLTP--LKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHTTVALIGG 141
           L++SITSD LRSACLTP  LKVYCGFDPTA+SLHLGNLLGLIVLSWFRRCGH  VALIGG
Sbjct: 69  LVESITSDALRSACLTPPPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHRAVALIGG 128

Query: 142 ATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSDSNFCPN----FVILNN 201
           ATARVGDPSGKSLERPELD +TLE N +GI+N I  ILG + + +   P+     VILNN
Sbjct: 129 ATARVGDPSGKSLERPELDAETLERNQMGISNTIHEILGRAQNSNLVGPDSDSSVVILNN 188

Query: 202 YDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGYDFLHLY 261
           Y+WWKEF  LDFLK VGRFARVG MMAKESVR+RLESEQGMSYTEFTYQLLQGYDFLHL+
Sbjct: 189 YNWWKEFSLLDFLKRVGRFARVGSMMAKESVRKRLESEQGMSYTEFTYQLLQGYDFLHLF 248

Query: 262 QNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKSEDGAIW 321
           QNEGVSVQIGGSDQWGNITAGTELIRK L   +G YGLTFPLLLKSDGTKFGKSEDGAIW
Sbjct: 249 QNEGVSVQIGGSDQWGNITAGTELIRKIL-QVEGAYGLTFPLLLKSDGTKFGKSEDGAIW 308

Query: 322 LSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNTAQRRLA 381
           LSP  LSPYKFYQYFFSVPD DV+RFL+ILTFLDI+EI  LE +M +PGYVPNTAQRRLA
Sbjct: 309 LSPTFLSPYKFYQYFFSVPDDDVIRFLKILTFLDIEEIVSLEGEMGKPGYVPNTAQRRLA 368

Query: 382 EEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLSVVD 441
           EEVTRFVHGEDGL+EALKATEAL+PG+ETKLDWKTIEGIAEDVP CSL YD VLNLS+VD
Sbjct: 369 EEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVPSCSLAYDAVLNLSLVD 428

Query: 442 LSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAGKKNKVVV 491
           LSV SGL ESKSAARRLLKQGGLYLNN+RVDSESKR+EA DIVDGK+LLLSAGKKNKV+V
Sbjct: 429 LSVSSGLFESKSAARRLLKQGGLYLNNNRVDSESKRIEAADIVDGKVLLLSAGKKNKVLV 488

[Close]

BLAST of Lsi07G001370 vs. TrEMBL
Match: A0A059APG6_EUCGR (Tyrosine--tRNA ligase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I01565 PE=3 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 1.3e-198
Identity = 362/479 (75.57%), Postives = 405/479 (84.55%), Query Frame = 1


Query: 28  KPSFSF--FLKTTSRCFASSSPTSLQSSTLHP-PTPSP-------PNVVQILEQRGLLDS 87
           +PSF F     T      +S+  S  S+TL P P PS        PNVV +LE+RGLL+S
Sbjct: 2   RPSFLFPALAPTLLPSPLNSASRSAHSTTLSPQPPPSSSSGRRPRPNVVDVLEERGLLES 61

Query: 88  ITSDNLRSACLTP--LKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHTTVALIGGATAR 147
           +TS+NLRSAC +   L+VYCGFDPTA+SLHLGNLLG+IVLSWFRRCGH TVAL+GGATAR
Sbjct: 62  VTSENLRSACSSGSGLRVYCGFDPTAESLHLGNLLGIIVLSWFRRCGHRTVALLGGATAR 121

Query: 148 VGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVS----DSNFCPNFVILNNYDWW 207
           VGDPSGKSLERPELDL+TLE NT GI   +TRILG        D +   +FVILNNYDWW
Sbjct: 122 VGDPSGKSLERPELDLETLERNTAGIAATVTRILGKGGDGDDDDDDGDGSFVILNNYDWW 181

Query: 208 KEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGYDFLHLYQNEG 267
           K+ + LDFLK VGR+ARVG M+AKESV++RLESEQGMSYTEFTYQLLQGYDFLHL+QNEG
Sbjct: 182 KDVKLLDFLKRVGRYARVGTMVAKESVKKRLESEQGMSYTEFTYQLLQGYDFLHLFQNEG 241

Query: 268 VSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKSEDGAIWLSPL 327
           V+VQIGGSDQWGNITAGTELIRK L   +G YGLTFPLLLKSDGTKFGKSEDGAIWLSP 
Sbjct: 242 VNVQIGGSDQWGNITAGTELIRKIL-QLEGAYGLTFPLLLKSDGTKFGKSEDGAIWLSPS 301

Query: 328 MLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNTAQRRLAEEVT 387
           MLSPYKFYQYFFSVPD D++RFL++LTFL+I+EI ++E  M  PGYVPNTAQRRLAEEVT
Sbjct: 302 MLSPYKFYQYFFSVPDTDIIRFLKVLTFLEIEEINEIEKDMKRPGYVPNTAQRRLAEEVT 361

Query: 388 RFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLSVVDLSVM 447
           RFVHGEDGL EALKATEAL+PGAETKLDWKTIEGIAEDVP CSL YD VLN S+VDLSV+
Sbjct: 362 RFVHGEDGLQEALKATEALRPGAETKLDWKTIEGIAEDVPSCSLNYDDVLNCSLVDLSVL 421

Query: 448 SGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAGKKNKVVVRIS 491
           +GL+ESKSAARRLLKQGG+YLNN RVD ESKR+EA DIVDGK+LLLSAGKKNKVVVRIS
Sbjct: 422 AGLMESKSAARRLLKQGGMYLNNGRVDGESKRIEAEDIVDGKVLLLSAGKKNKVVVRIS 479

[Close]

BLAST of Lsi07G001370 vs. TrEMBL
Match: K7KAB4_SOYBN (Tyrosine--tRNA ligase OS=Glycine max GN=GLYMA_02G234500 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 2.1e-196
Identity = 370/489 (75.66%), Postives = 402/489 (82.21%), Query Frame = 1


Query: 22  RSFFFSKPSFSFF--LKTTSRCFASSSPTSLQSSTLH----PPTPSPPNVVQILEQRGLL 81
           R+  F+  +  FF   K +S  F     T    STL     P   +  NV+ ILE+RGL+
Sbjct: 9   RTLLFTHSTKRFFRPFKPSSSPFPLQCTTKTTCSTLQQQQQPRRNNNYNVIGILEERGLV 68

Query: 82  DSITSDNLRSACLTP--LKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHTTVALIGGAT 141
           +SITSD LRSACLTP  LKVYCGFDPTA+SLHLGNLLGLIVLSWFR CGH  VALIGGAT
Sbjct: 69  ESITSDALRSACLTPAPLKVYCGFDPTAESLHLGNLLGLIVLSWFRCCGHRAVALIGGAT 128

Query: 142 ARVGDPSGKSLERPELDLQTLEANTLGITNIITRILG----------NSVSDSNFCPN-- 201
           A VGDPSGKSLERPELD +TLE N LGI+N I +ILG          NS SDSN   N  
Sbjct: 129 ALVGDPSGKSLERPELDAETLERNQLGISNTIHQILGRAQDSNLVGPNSNSDSNSDSNSS 188

Query: 202 FVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGY 261
            VILNNYDWWKEF  LDFLK VG+FARVG MMAKESVR+RLESEQGMSYTEFTYQLLQGY
Sbjct: 189 VVILNNYDWWKEFSLLDFLKRVGKFARVGSMMAKESVRKRLESEQGMSYTEFTYQLLQGY 248

Query: 262 DFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKS 321
           DFLHL+QNEGVSVQIGGSDQWGNITAGTELIRK L   +G YGLTFPLLLKSDGTKFGKS
Sbjct: 249 DFLHLFQNEGVSVQIGGSDQWGNITAGTELIRKIL-QVEGAYGLTFPLLLKSDGTKFGKS 308

Query: 322 EDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNT 381
           EDGAIWLSP  LSPYKFYQYFFSVPD DV+RFL+ILTFLDI+EI  LE +M +PGYVPNT
Sbjct: 309 EDGAIWLSPTFLSPYKFYQYFFSVPDDDVIRFLKILTFLDIEEIVALEGEMGKPGYVPNT 368

Query: 382 AQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVL 441
           AQRRLAEEVTRFVHGEDGL+EALKATEAL+PG+ETKLDWKTIEGIAEDVPCCSL YD VL
Sbjct: 369 AQRRLAEEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVPCCSLAYDAVL 428

Query: 442 NLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAGK 491
           NLS+VDL V SGL ESKSAARRLLKQGGLYLNN+RVD+E KR+EA DIVDGK+LLLSAGK
Sbjct: 429 NLSLVDLLVSSGLFESKSAARRLLKQGGLYLNNNRVDNEGKRIEAADIVDGKVLLLSAGK 488

[Close]

BLAST of Lsi07G001370 vs. TrEMBL
Match: A0A067L0B5_JATCU (Tyrosine--tRNA ligase OS=Jatropha curcas GN=JCGZ_26914 PE=3 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 3.5e-196
Identity = 353/449 (78.62%), Postives = 394/449 (87.75%), Query Frame = 1


Query: 46  SPTSLQSSTLHPPTPSPPNVVQILEQRGLLDSITSDNLRSACLTP--LKVYCGFDPTAQS 105
           SPT   S+T        PNVV ILE+RGLL+S+TSDNLRS   T   ++VYCGFDPTA+S
Sbjct: 64  SPTHQASTTQIQEAIRHPNVVDILEERGLLESLTSDNLRSISSTSNNVRVYCGFDPTAES 123

Query: 106 LHLGNLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITN 165
           LHLGNLLG+IVLSWF+RCGH  VALIGGATAR+GDPSGKSLERPELD+ TLE NT+GI+N
Sbjct: 124 LHLGNLLGIIVLSWFQRCGHKAVALIGGATARIGDPSGKSLERPELDVDTLEKNTIGISN 183

Query: 166 IITRILGNSVSDSNFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLE 225
            +TRI   +++ +N     VI+NNYDWWKE + LDFLK+VG++ARVG M++KESV++RLE
Sbjct: 184 TLTRIFNMNMNLNN---QVVIMNNYDWWKEVKLLDFLKQVGKYARVGSMISKESVKKRLE 243

Query: 226 SEQGMSYTEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGI- 285
           SEQGMSYTEFTYQLLQGYDFL+L++NEGV+VQIGGSDQWGNITAGTELIRK L    G  
Sbjct: 244 SEQGMSYTEFTYQLLQGYDFLYLFENEGVNVQIGGSDQWGNITAGTELIRKILQPDGGTE 303

Query: 286 -YGLTFPLLLKSDGTKFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLD 345
            YGLTFPLLLKSDG KFGKSEDGAIWLSP  LSPYKFYQYFFSVPDADV+RFL+ILTFLD
Sbjct: 304 AYGLTFPLLLKSDGIKFGKSEDGAIWLSPSFLSPYKFYQYFFSVPDADVIRFLKILTFLD 363

Query: 346 IKEIQDLESQMAEPGYVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWK 405
           + EI +LE +M +PGYVPN AQRRLAEEVTRFVHGEDGLSEALKATEAL+PGAETKLDWK
Sbjct: 364 LNEIDELEREMKKPGYVPNKAQRRLAEEVTRFVHGEDGLSEALKATEALRPGAETKLDWK 423

Query: 406 TIEGIAEDVPCCSLEYDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSES 465
           TIEGIAEDVP CSL YDQVLNLS+VDLSV +GLLESKSAARRLLKQGGLYLNNSRVDSES
Sbjct: 424 TIEGIAEDVPSCSLAYDQVLNLSLVDLSVSAGLLESKSAARRLLKQGGLYLNNSRVDSES 483

Query: 466 KRVEAVDIVDGKILLLSAGKKNKVVVRIS 491
           KRVEA DIVDGK+LLLSAGKKNKVVVRIS
Sbjct: 484 KRVEAEDIVDGKVLLLSAGKKNKVVVRIS 509

[Close]

BLAST of Lsi07G001370 vs. TAIR10
Match: AT3G02660.1 (AT3G02660.1 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)

HSP 1 Score: 652.1 bits (1681), Expect = 2.7e-187
Identity = 348/509 (68.37%), Postives = 400/509 (78.59%), Query Frame = 1


Query: 2   VIVASSSSSCYGSRAFLLSQRS----FFFSKPSFSFFLKTTSRCFASSSPTSLQSS---T 61
           +  AS S     SR FL   R      F  K S +FF +       S+S T+L SS   +
Sbjct: 7   ITFASRSILPICSRTFLSPLRVASLLVFPEKSSATFFRRVQVPHLFSTSTTTLFSSVKCS 66

Query: 62  LHPPTPSP---------PNVVQILEQRGLLDSITSDNLRSAC----LTPLKVYCGFDPTA 121
           +H  T SP         PNVV ILE+RGLL+SITS+NLRSAC    + PL+VYCGFDPTA
Sbjct: 67  IHS-TSSPETENQAVFRPNVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTA 126

Query: 122 QSLHLGNLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGI 181
           +SLHLGNLLG+IVLSWF+RCGH  V LIGGAT RVGDPSGKSLERPELD  TLE N  GI
Sbjct: 127 ESLHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGI 186

Query: 182 TNIITRILGNSVSDSNFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRR 241
           T II +ILG++ S      ++VI NNYDWWK+   LDFL +VGRFARVG MMAKESV++R
Sbjct: 187 TKIIIKILGSNPSPGG---SYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKR 246

Query: 242 LESEQGMSYTEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADG 301
           LESEQGMSYTEFTYQLLQ YDFLHL++NEG++VQIGGSDQWGNITAGT+LIRK L   + 
Sbjct: 247 LESEQGMSYTEFTYQLLQAYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEA 306

Query: 302 IYGLTFPLLLKSDGTKFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLD 361
            YGLTFPLLLK+DGTKFGKSEDGAIWLSP MLSPYKFYQYFFSVPD DV+RFL+ LTFL 
Sbjct: 307 AYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLS 366

Query: 362 IKEIQDLESQMAEPGYVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWK 421
           + EI+ LE QM++PGYVPNTAQ +LAEEVTRFVHGE+GL EA+KATEAL+PGAETKLDW 
Sbjct: 367 LDEIKILEDQMSKPGYVPNTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWN 426

Query: 422 TIEGIAEDVPCCSLEYDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSES 481
            IE IAED+P CSL  D+V  LS+VDLSV +GL ESKSAARR+LKQGG Y+NN RVD E+
Sbjct: 427 LIERIAEDIPSCSLPIDRVSGLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDEN 486

Query: 482 KRVEAVDIVDGKILLLSAGKKNKVVVRIS 491
           KRV+  DIV+G+ L+LSAGKKNKVVVRIS
Sbjct: 487 KRVDEEDIVEGRGLVLSAGKKNKVVVRIS 511

[Close]

BLAST of Lsi07G001370 vs. NCBI nr
Match: gi|449458313|ref|XP_004146892.1| (PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Cucumis sativus])

HSP 1 Score: 879.0 bits (2270), Expect = 3.8e-252
Identity = 455/495 (91.92%), Postives = 468/495 (94.55%), Query Frame = 1


Query: 1   MVIVASSSSSCYGSRAFLLSQRSFFFS----KPSFSFFLKTTSRCFASSSPTSLQSSTLH 60
           M I ASSSSSCY S+AFLLSQRSFFFS    KPS SFF K TSR F+SSSPTSL  S   
Sbjct: 3   MAIFASSSSSCYTSKAFLLSQRSFFFSTISSKPSSSFFFKPTSRFFSSSSPTSLHYS--- 62

Query: 61  PPTPSPP-NVVQILEQRGLLDSITSDNLRSACLTPLKVYCGFDPTAQSLHLGNLLGLIVL 120
            PTPSPP NV+QILEQRGLLDSITSDNLRSA L+PLKVYCGFDPTAQSLHLGNLLGLIVL
Sbjct: 63  -PTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVL 122

Query: 121 SWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSD 180
           SWFRRCGH+TVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIIT+ILGNS SD
Sbjct: 123 SWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSD 182

Query: 181 SNFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTY 240
           S+FCPNFVILNNYDWWKEFRFLDFLK+VGRFARVG M+AKESVRRRLESEQGMSYTEFTY
Sbjct: 183 SDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTY 242

Query: 241 QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDG 300
           QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLP ADG+YGLTFPLLLKSDG
Sbjct: 243 QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLLLKSDG 302

Query: 301 TKFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEP 360
           TKFGKSEDGAIWLSP MLSPYKFYQYFFSVPDADVVRFLRILTFLDI+EIQDLESQM +P
Sbjct: 303 TKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMMKP 362

Query: 361 GYVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSL 420
           GYVPNTAQRRLAEEVTRFVHGEDGL EALKATEALKPGAETKLDWKTIEGIAEDVPCCSL
Sbjct: 363 GYVPNTAQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSL 422

Query: 421 EYDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKIL 480
           EYDQVLNLSVVDLSV SGLLESKSAARRLLKQGGLYLNN RVDSESKRVEAVDIVDGK+L
Sbjct: 423 EYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIVDGKVL 482

Query: 481 LLSAGKKNKVVVRIS 491
           LLSAGKKNKVVVRIS
Sbjct: 483 LLSAGKKNKVVVRIS 493

[Close]

BLAST of Lsi07G001370 vs. NCBI nr
Match: gi|659107761|ref|XP_008453844.1| (PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Cucumis melo])

HSP 1 Score: 876.3 bits (2263), Expect = 2.5e-251
Identity = 450/495 (90.91%), Postives = 470/495 (94.95%), Query Frame = 1


Query: 1   MVIVASSSSSCYGSRAFLLSQRSFFFS----KPSFSFFLKTTSRCFASSSPTSLQSSTLH 60
           M I+ASSS SCY S+AFLLSQRSFFFS    KPS SFFLK TSR FASSSPTSL+ S   
Sbjct: 3   MAILASSSPSCYTSKAFLLSQRSFFFSTISSKPSSSFFLKPTSRFFASSSPTSLRYS--- 62

Query: 61  PPTPSPP-NVVQILEQRGLLDSITSDNLRSACLTPLKVYCGFDPTAQSLHLGNLLGLIVL 120
            PTPSPP NV+QILEQRGLLDSITSDNLRSA L+PLKVYCGFDPTAQSLHLGNLLGLIVL
Sbjct: 63  -PTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVL 122

Query: 121 SWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSD 180
           SWFRRCGH+TVALIGGATAR+GDPSGKSLERPELDLQTLEANTLGITNIIT+ILGNS SD
Sbjct: 123 SWFRRCGHSTVALIGGATARIGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSD 182

Query: 181 SNFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTY 240
           S+FCPNF+ILNNYDWWKEFRFLDFLK+VGRFARVG M+AKESVRRRLESEQGMSYTEFTY
Sbjct: 183 SDFCPNFLILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTY 242

Query: 241 QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDG 300
           QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLP ADG+YGLTFPLLLKSDG
Sbjct: 243 QLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLLLKSDG 302

Query: 301 TKFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEP 360
           TKFGKSEDGAIWLSP MLSPYKFYQYFFSVPDADVVRFLRILTFLDI+EIQDLESQM +P
Sbjct: 303 TKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMTKP 362

Query: 361 GYVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSL 420
           GYVPNT QRRLAEEVTRFVHGE+GLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSL
Sbjct: 363 GYVPNTVQRRLAEEVTRFVHGENGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSL 422

Query: 421 EYDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKIL 480
           EYDQVLNLSVVDLSV +GLLESKSAARRLLKQGGLYLNN RVDSESKRVEAVD++DGK+L
Sbjct: 423 EYDQVLNLSVVDLSVTTGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDVIDGKVL 482

Query: 481 LLSAGKKNKVVVRIS 491
           LLSAGKKNKVVVRIS
Sbjct: 483 LLSAGKKNKVVVRIS 493

[Close]

BLAST of Lsi07G001370 vs. NCBI nr
Match: gi|356551940|ref|XP_003544330.1| (PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like [Glycine max])

HSP 1 Score: 704.5 bits (1817), Expect = 1.3e-199
Identity = 371/483 (76.81%), Postives = 404/483 (83.64%), Query Frame = 1


Query: 22  RSFFFSKPSFSFF--LKTTSRCFASSSPTSLQSSTLHPPTPSPP------NVVQILEQRG 81
           RS  F+  +  FF   K +S  F     T    STL      P       NV+ ILE+RG
Sbjct: 9   RSLLFTHTTKCFFRPFKPSSSPFPLHCATKTTCSTLQQQQQQPRRNNSNNNVIGILEERG 68

Query: 82  LLDSITSDNLRSACLTP--LKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHTTVALIGG 141
           L++SITSD LRSACLTP  LKVYCGFDPTA+SLHLGNLLGLIVLSWFRRCGH  VALIGG
Sbjct: 69  LVESITSDALRSACLTPPPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHRAVALIGG 128

Query: 142 ATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVSDSNFCPN----FVILNN 201
           ATARVGDPSGKSLERPELD +TLE N +GI+N I  ILG + + +   P+     VILNN
Sbjct: 129 ATARVGDPSGKSLERPELDAETLERNQMGISNTIHEILGRAQNSNLVGPDSDSSVVILNN 188

Query: 202 YDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGYDFLHLY 261
           Y+WWKEF  LDFLK VGRFARVG MMAKESVR+RLESEQGMSYTEFTYQLLQGYDFLHL+
Sbjct: 189 YNWWKEFSLLDFLKRVGRFARVGSMMAKESVRKRLESEQGMSYTEFTYQLLQGYDFLHLF 248

Query: 262 QNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKSEDGAIW 321
           QNEGVSVQIGGSDQWGNITAGTELIRK L   +G YGLTFPLLLKSDGTKFGKSEDGAIW
Sbjct: 249 QNEGVSVQIGGSDQWGNITAGTELIRKIL-QVEGAYGLTFPLLLKSDGTKFGKSEDGAIW 308

Query: 322 LSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNTAQRRLA 381
           LSP  LSPYKFYQYFFSVPD DV+RFL+ILTFLDI+EI  LE +M +PGYVPNTAQRRLA
Sbjct: 309 LSPTFLSPYKFYQYFFSVPDDDVIRFLKILTFLDIEEIVSLEGEMGKPGYVPNTAQRRLA 368

Query: 382 EEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLSVVD 441
           EEVTRFVHGEDGL+EALKATEAL+PG+ETKLDWKTIEGIAEDVP CSL YD VLNLS+VD
Sbjct: 369 EEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVPSCSLAYDAVLNLSLVD 428

Query: 442 LSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAGKKNKVVV 491
           LSV SGL ESKSAARRLLKQGGLYLNN+RVDSESKR+EA DIVDGK+LLLSAGKKNKV+V
Sbjct: 429 LSVSSGLFESKSAARRLLKQGGLYLNNNRVDSESKRIEAADIVDGKVLLLSAGKKNKVLV 488

[Close]

BLAST of Lsi07G001370 vs. NCBI nr
Match: gi|629089480|gb|KCW55733.1| (hypothetical protein EUGRSUZ_I01565, partial [Eucalyptus grandis])

HSP 1 Score: 700.7 bits (1807), Expect = 1.9e-198
Identity = 362/479 (75.57%), Postives = 405/479 (84.55%), Query Frame = 1


Query: 28  KPSFSF--FLKTTSRCFASSSPTSLQSSTLHP-PTPSP-------PNVVQILEQRGLLDS 87
           +PSF F     T      +S+  S  S+TL P P PS        PNVV +LE+RGLL+S
Sbjct: 2   RPSFLFPALAPTLLPSPLNSASRSAHSTTLSPQPPPSSSSGRRPRPNVVDVLEERGLLES 61

Query: 88  ITSDNLRSACLTP--LKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHTTVALIGGATAR 147
           +TS+NLRSAC +   L+VYCGFDPTA+SLHLGNLLG+IVLSWFRRCGH TVAL+GGATAR
Sbjct: 62  VTSENLRSACSSGSGLRVYCGFDPTAESLHLGNLLGIIVLSWFRRCGHRTVALLGGATAR 121

Query: 148 VGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVS----DSNFCPNFVILNNYDWW 207
           VGDPSGKSLERPELDL+TLE NT GI   +TRILG        D +   +FVILNNYDWW
Sbjct: 122 VGDPSGKSLERPELDLETLERNTAGIAATVTRILGKGGDGDDDDDDGDGSFVILNNYDWW 181

Query: 208 KEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQLLQGYDFLHLYQNEG 267
           K+ + LDFLK VGR+ARVG M+AKESV++RLESEQGMSYTEFTYQLLQGYDFLHL+QNEG
Sbjct: 182 KDVKLLDFLKRVGRYARVGTMVAKESVKKRLESEQGMSYTEFTYQLLQGYDFLHLFQNEG 241

Query: 268 VSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGTKFGKSEDGAIWLSPL 327
           V+VQIGGSDQWGNITAGTELIRK L   +G YGLTFPLLLKSDGTKFGKSEDGAIWLSP 
Sbjct: 242 VNVQIGGSDQWGNITAGTELIRKIL-QLEGAYGLTFPLLLKSDGTKFGKSEDGAIWLSPS 301

Query: 328 MLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPGYVPNTAQRRLAEEVT 387
           MLSPYKFYQYFFSVPD D++RFL++LTFL+I+EI ++E  M  PGYVPNTAQRRLAEEVT
Sbjct: 302 MLSPYKFYQYFFSVPDTDIIRFLKVLTFLEIEEINEIEKDMKRPGYVPNTAQRRLAEEVT 361

Query: 388 RFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLSVVDLSVM 447
           RFVHGEDGL EALKATEAL+PGAETKLDWKTIEGIAEDVP CSL YD VLN S+VDLSV+
Sbjct: 362 RFVHGEDGLQEALKATEALRPGAETKLDWKTIEGIAEDVPSCSLNYDDVLNCSLVDLSVL 421

Query: 448 SGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILLLSAGKKNKVVVRIS 491
           +GL+ESKSAARRLLKQGG+YLNN RVD ESKR+EA DIVDGK+LLLSAGKKNKVVVRIS
Sbjct: 422 AGLMESKSAARRLLKQGGMYLNNGRVDGESKRIEAEDIVDGKVLLLSAGKKNKVVVRIS 479

[Close]

BLAST of Lsi07G001370 vs. NCBI nr
Match: gi|702464441|ref|XP_010028900.1| (PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Eucalyptus grandis])

HSP 1 Score: 700.3 bits (1806), Expect = 2.4e-198
Identity = 364/494 (73.68%), Postives = 407/494 (82.39%), Query Frame = 1


Query: 22  RSFFFSKPSFSFFLKTTSRCFASSSPTSLQS----------STLHPPTPSP--------- 81
           R F F+  S S   +  S  F + +PT L S          ST   P P P         
Sbjct: 14  RLFSFNPASLSPLRRRPSFLFPALAPTLLPSPLNSASRSAHSTTLSPQPPPSSSSGRRPR 73

Query: 82  PNVVQILEQRGLLDSITSDNLRSACLTP--LKVYCGFDPTAQSLHLGNLLGLIVLSWFRR 141
           PNVV +LE+RGLL+S+TS+NLRSAC +   L+VYCGFDPTA+SLHLGNLLG+IVLSWFRR
Sbjct: 74  PNVVDVLEERGLLESVTSENLRSACSSGSGLRVYCGFDPTAESLHLGNLLGIIVLSWFRR 133

Query: 142 CGHTTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITRILGNSVS----DS 201
           CGH TVAL+GGATARVGDPSGKSLERPELDL+TLE NT GI   +TRILG        D 
Sbjct: 134 CGHRTVALLGGATARVGDPSGKSLERPELDLETLERNTAGIAATVTRILGKGGDGDDDDD 193

Query: 202 NFCPNFVILNNYDWWKEFRFLDFLKEVGRFARVGQMMAKESVRRRLESEQGMSYTEFTYQ 261
           +   +FVILNNYDWWK+ + LDFLK VGR+ARVG M+AKESV++RLESEQGMSYTEFTYQ
Sbjct: 194 DGDGSFVILNNYDWWKDVKLLDFLKRVGRYARVGTMVAKESVKKRLESEQGMSYTEFTYQ 253

Query: 262 LLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPDADGIYGLTFPLLLKSDGT 321
           LLQGYDFLHL+QNEGV+VQIGGSDQWGNITAGTELIRK L   +G YGLTFPLLLKSDGT
Sbjct: 254 LLQGYDFLHLFQNEGVNVQIGGSDQWGNITAGTELIRKIL-QLEGAYGLTFPLLLKSDGT 313

Query: 322 KFGKSEDGAIWLSPLMLSPYKFYQYFFSVPDADVVRFLRILTFLDIKEIQDLESQMAEPG 381
           KFGKSEDGAIWLSP MLSPYKFYQYFFSVPD D++RFL++LTFL+I+EI ++E  M  PG
Sbjct: 314 KFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDTDIIRFLKVLTFLEIEEINEIEKDMKRPG 373

Query: 382 YVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLE 441
           YVPNTAQRRLAEEVTRFVHGEDGL EALKATEAL+PGAETKLDWKTIEGIAEDVP CSL 
Sbjct: 374 YVPNTAQRRLAEEVTRFVHGEDGLQEALKATEALRPGAETKLDWKTIEGIAEDVPSCSLN 433

Query: 442 YDQVLNLSVVDLSVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEAVDIVDGKILL 491
           YD VLN S+VDLSV++GL+ESKSAARRLLKQGG+YLNN RVD ESKR+EA DIVDGK+LL
Sbjct: 434 YDDVLNCSLVDLSVLAGLMESKSAARRLLKQGGMYLNNGRVDGESKRIEAEDIVDGKVLL 493

The following BLAST results are available for this feature:

BLAST of Lsi07G001370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SYYM_ARATH	4.7e-186	68.37	Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=EM...	[more]
SYY_PARUW	7.4e-131	52.93	Tyrosine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25) GN=tyrS PE=3 ...	[more]
SYY_BACFR	5.2e-92	44.80	Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain YCH46) GN=tyrS PE=3 SV=1	[more]
SYY_ROSS1	6.8e-92	44.06	Tyrosine--tRNA ligase OS=Roseiflexus sp. (strain RS-1) GN=tyrS PE=3 SV=1	[more]
SYY_BACFN	1.2e-91	44.80	Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JC...	[more]

BLAST of Lsi07G001370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU70_CUCSA	2.6e-252	91.92	Tyrosine--tRNA ligase OS=Cucumis sativus GN=Csa_4G025150 PE=3 SV=1	[more]
K7M864_SOYBN	8.9e-200	76.81	Tyrosine--tRNA ligase OS=Glycine max GN=GLYMA_14G202100 PE=3 SV=1	[more]
A0A059APG6_EUCGR	1.3e-198	75.57	Tyrosine--tRNA ligase (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I01565 PE=3 SV...	[more]
K7KAB4_SOYBN	2.1e-196	75.66	Tyrosine--tRNA ligase OS=Glycine max GN=GLYMA_02G234500 PE=3 SV=1	[more]
A0A067L0B5_JATCU	3.5e-196	78.62	Tyrosine--tRNA ligase OS=Jatropha curcas GN=JCGZ_26914 PE=3 SV=1	[more]

BLAST of Lsi07G001370 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02660.1	2.7e-187	68.37	Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial	[more]

BLAST of Lsi07G001370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458313\|ref\|XP_004146892.1\|	3.8e-252	91.92	PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Cucumis sativus]	[more]
gi\|659107761\|ref\|XP_008453844.1\|	2.5e-251	90.91	PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Cucumis melo]	[more]
gi\|356551940\|ref\|XP_003544330.1\|	1.3e-199	76.81	PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial-like [Glycine max]	[more]
gi\|629089480\|gb\|KCW55733.1\|	1.9e-198	75.57	hypothetical protein EUGRSUZ_I01565, partial [Eucalyptus grandis]	[more]
gi\|702464441\|ref\|XP_010028900.1\|	2.4e-198	73.68	PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0004831	tyrosine-tRNA ligase activity
GO:0005524	ATP binding
GO:0004812	aminoacyl-tRNA ligase activity
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006437	tyrosyl-tRNA aminoacylation
GO:0006418	tRNA aminoacylation for protein translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR024107	Tyr-tRNA-ligase_bac_1
IPR024088	Tyr-tRNA-ligase_bac-type
IPR014729	Rossmann-like_a/b/a_fold
IPR002942	S4_RNA-bd
IPR002307	Tyr-tRNA-ligase
IPR002305	aa-tRNA-synth_Ic
IPR001412	aa-tRNA-synth_I_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0048481	plant ovule development
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0006418	tRNA aminoacylation for protein translation
biological_process	GO:0006437	tyrosyl-tRNA aminoacylation
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0004831	tyrosine-tRNA ligase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G001370.1	Lsi07G001370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 99..109 scor
IPR002305	Aminoacyl-tRNA synthetase, class Ic	PFAM	PF00579	tRNA-synt_1b	coord: 90..389 score: 6.3
IPR002307	Tyrosine-tRNA ligase	PRINTS	PR01040	TRNASYNTHTYR	coord: 227..242 score: 1.7E-26coord: 103..125 score: 1.7E-26coord: 248..270 score: 1.7E-26coord: 283..295 score: 1.7
IPR002307	Tyrosine-tRNA ligase	TIGRFAMs	TIGR00234	TIGR00234	coord: 65..488 score: 5.2E
IPR002942	RNA-binding S4 domain	GENE3D	G3DSA:3.10.290.10		coord: 384..489 score: 8.9
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 432..469 score: 7.
IPR002942	RNA-binding S4 domain	PROFILE	PS50889	S4	coord: 423..489 score: 11
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 63..299 score: 5.6
IPR024088	Tyrosine-tRNA ligase, bacterial-type	PANTHER	PTHR11766	TYROSYL-TRNA SYNTHETASE	coord: 24..489 score: 1.4E
IPR024107	Tyrosine-tRNA ligase, bacterial-type, type 1	HAMAP	MF_02006	Tyr_tRNA_synth_type1	coord: 63..489 score: 39
None	No IPR available	GENE3D	G3DSA:1.10.240.10		coord: 300..383 score: 2.8
None	No IPR available	PANTHER	PTHR11766:SF0	TYROSINE--TRNA LIGASE, MITOCHONDRIAL	coord: 24..489 score: 1.4E
None	No IPR available	unknown	SSF52374	Nucleotidylyl transferase	coord: 64..389 score: 4.13
None	No IPR available	unknown	SSF55174	Alpha-L RNA-binding motif	coord: 392..488 score: 8.11

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G001370	Csa4G025150	Cucumber (Chinese Long) v2	culsiB303
Lsi07G001370	CSPI04G04300	Wild cucumber (PI 183967)	cpilsiB303
Lsi07G001370	Cucsa.093940	Cucumber (Gy14) v1	cgylsiB115
Lsi07G001370	CmaCh04G003730	Cucurbita maxima (Rimu)	cmalsiB696
Lsi07G001370	CmoCh04G003940	Cucurbita moschata (Rifu)	cmolsiB690
Lsi07G001370	Cla010694	Watermelon (97103) v1	lsiwmB441
Lsi07G001370	MELO3C017627	Melon (DHL92) v3.5.1	lsimeB454
Lsi07G001370	ClCG07G017190	Watermelon (Charleston Gray)	lsiwcgB407
Lsi07G001370	MELO3C017627.2	Melon (DHL92) v3.6.1	lsimedB471
Lsi07G001370	Cla97C07G144210	Watermelon (97103) v2	lsiwmbB406
Lsi07G001370	Bhi01G001987	Wax gourd	lsiwgoB555
Lsi07G001370	Cp4.1LG01g03350	Cucurbita pepo (Zucchini)	cpelsiB374
Lsi07G001370	CsGy4G004210	Cucumber (Gy14) v2	cgyblsiB277
Lsi07G001370	Carg08047	Silver-seed gourd	carlsiB347
Lsi07G001370	CsaV3_4G004390	Cucumber (Chinese Long) v3	cuclsiB322

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G001370	Bottle gourd (USVL1VR-Ls)	lsilsiB018
Lsi07G001370	Cucurbita maxima (Rimu)	cmalsiB323
Lsi07G001370	Cucurbita maxima (Rimu)	cmalsiB590
Lsi07G001370	Cucurbita moschata (Rifu)	cmolsiB312
Lsi07G001370	Cucurbita moschata (Rifu)	cmolsiB573
Lsi07G001370	Cucurbita pepo (Zucchini)	cpelsiB182
Lsi07G001370	Wild cucumber (PI 183967)	cpilsiB389
Lsi07G001370	Cucumber (Chinese Long) v2	culsiB385
Lsi07G001370	Melon (DHL92) v3.5.1	lsimeB428
Lsi07G001370	Watermelon (Charleston Gray)	lsiwcgB393
Lsi07G001370	Silver-seed gourd	carlsiB653
Lsi07G001370	Silver-seed gourd	carlsiB792
Lsi07G001370	Cucumber (Chinese Long) v3	cuclsiB408
Lsi07G001370	Watermelon (97103) v2	lsiwmbB390