Carg08047 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08047
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tyrosine--tRNA ligase
Location	Cucurbita_argyrosperma_scaffold_050 : 398799 .. 400274 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGGCTGCTTCTGCTCGAAGCTCCATGACCTTCCTTCTCTCTCAGCGGACCCTCTTCTTCTCCAATTCCATCATTTCCTCTAAGCCCTCTTTGTCCTTCTCCCTCAAAAGCACTTTCAGCTGCCTCGCTTCCTCTGCAAGTTCTCTCCAATCTTCCACTCTCGAGCCCCAAACCGCTTCTCGGCGCAACGTCGTCGAAATTCTCGAAGAACGAGGCCTTCTCGAGTCCATCACCAGCGACAGTCTCCGCTCTGCTTGTCTCAGCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACCGCCGAGAGCTTACATTTAGGTAATCTTCTTGGTCTCATCGTCCTCTCTTGGTTTCGCCGATGCGGCCACACCACCGTCGCTCTCATCGGCGGTGCCACTGCCCGCGTCGGCGATCCCTCAGGCAAGAGCCTTGAACGGCCAGAGCTCGATCTCCAGACCTTGGAGACCAACACTCTCGGAATTACAAATATTATAACTAGAATTTTGGGGAACTCGGGCTTGGATTCCAATTTTAGCTCTGATTTTGTGATTCTTAATAATTACGATTGGTGGAAGGAGTTCAGATTTCTAGATTTCTTGAAAGAAGTAGGTCGGTTTGCTAGAGTAGGAACGATGATGGCTAAGGAGAGCGTTAAGAGGAGATTGGAATCGGATCAAGGAATGAGCTATACTGAATTTACTTACCAGCTCTTGCAGGGATACGATTTTCTGTATCTGTATCAAAACCAGGGCGTTTCTGTTCAGATTGGAGGAAGTGATCAATGGGGGAATATCACTGCAGGGACTGAGCTCATTAGGAAAATTTTGCCACAGGCTGATGGCGTTTATGGCTTGACATTCCCTCTTCTTCTGAAGAGCGATGGCACCAAATTCGGCAAGTCCGTAGACGGCGCCATTTGGCTTTCGCCGTCGAAGTTATCTCCATACAAGTTTTATCAGTATTTCTTCAGTGTCCCAGATGCAGATGTGATTAGATTTCTCAGAATTCTCACGTTTTTGGATATTGAGGAGATTCGAGACTTGGAAAGTCAAATGGCTAGCCCTGGATATGTACCGAACACGGCGCAGAGGCGGCTGGCCGAAGAAGTTACTCGATTTGTTCATGGAGAAGATGGTTTGAATGAGGCCCTTGAGGCCACTGAAGCATTGAAACCAGGAGCAGAGACAAAGTTGGATTGGAAGACTATTGTGGGGATTGGTGAGGATGTTCCATGCTGCTCGTTGGAGTACGATCAAGTGTTGAATCTTTCGGTTGTCGATCTTGCAGTTATGTCTGGTTTGCTCGAAAGCAAGTCGGCTGCCCGTCGTTTGCTGAAGCAAGGGGGACTCTATTTGAATAACAGTAGAGTGGATTCTGAGAGTAAAAAAATTGAAGCTATAGACATTATTGATGGGAAAGTTCTACTTTTATCTGCAGGAAAGAAGAACAAGATGGTTGTGAGGATATCATAA

mRNA sequence

ATGGCGATGGCTGCTTCTGCTCGAAGCTCCATGACCTTCCTTCTCTCTCAGCGGACCCTCTTCTTCTCCAATTCCATCATTTCCTCTAAGCCCTCTTTGTCCTTCTCCCTCAAAAGCACTTTCAGCTGCCTCGCTTCCTCTGCAAGTTCTCTCCAATCTTCCACTCTCGAGCCCCAAACCGCTTCTCGGCGCAACGTCGTCGAAATTCTCGAAGAACGAGGCCTTCTCGAGTCCATCACCAGCGACAGTCTCCGCTCTGCTTGTCTCAGCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACCGCCGAGAGCTTACATTTAGGTAATCTTCTTGGTCTCATCGTCCTCTCTTGGTTTCGCCGATGCGGCCACACCACCGTCGCTCTCATCGGCGGTGCCACTGCCCGCGTCGGCGATCCCTCAGGCAAGAGCCTTGAACGGCCAGAGCTCGATCTCCAGACCTTGGAGACCAACACTCTCGGAATTACAAATATTATAACTAGAATTTTGGGGAACTCGGGCTTGGATTCCAATTTTAGCTCTGATTTTGTGATTCTTAATAATTACGATTGGTGGAAGGAGTTCAGATTTCTAGATTTCTTGAAAGAAGTAGGTCGGTTTGCTAGAGTAGGAACGATGATGGCTAAGGAGAGCGTTAAGAGGAGATTGGAATCGGATCAAGGAATGAGCTATACTGAATTTACTTACCAGCTCTTGCAGGGATACGATTTTCTGTATCTGTATCAAAACCAGGGCGTTTCTGTTCAGATTGGAGGAAGTGATCAATGGGGGAATATCACTGCAGGGACTGAGCTCATTAGGAAAATTTTGCCACAGGCTGATGGCGTTTATGGCTTGACATTCCCTCTTCTTCTGAAGAGCGATGGCACCAAATTCGGCAAGTCCGTAGACGGCGCCATTTGGCTTTCGCCGTCGAAGTTATCTCCATACAAGTTTTATCAGTATTTCTTCAGTGTCCCAGATGCAGATGTGATTAGATTTCTCAGAATTCTCACGTTTTTGGATATTGAGGAGATTCGAGACTTGGAAAGTCAAATGGCTAGCCCTGGATATGTACCGAACACGGCGCAGAGGCGGCTGGCCGAAGAAGTTACTCGATTTGTTCATGGAGAAGATGGTTTGAATGAGGCCCTTGAGGCCACTGAAGCATTGAAACCAGGAGCAGAGACAAAGTTGGATTGGAAGACTATTGTGGGGATTGGTGAGGATGTTCCATGCTGCTCGTTGGAGTACGATCAAGTGTTGAATCTTTCGGTTGTCGATCTTGCAGTTATGTCTGGTTTGCTCGAAAGCAAGTCGGCTGCCCGTCGTTTGCTGAAGCAAGGGGGACTCTATTTGAATAACAGTAGAGTGGATTCTGAGAGTAAAAAAATTGAAGCTATAGACATTATTGATGGGAAAGTTCTACTTTTATCTGCAGGAAAGAAGAACAAGATGGTTGTGAGGATATCATAA

Coding sequence (CDS)

ATGGCGATGGCTGCTTCTGCTCGAAGCTCCATGACCTTCCTTCTCTCTCAGCGGACCCTCTTCTTCTCCAATTCCATCATTTCCTCTAAGCCCTCTTTGTCCTTCTCCCTCAAAAGCACTTTCAGCTGCCTCGCTTCCTCTGCAAGTTCTCTCCAATCTTCCACTCTCGAGCCCCAAACCGCTTCTCGGCGCAACGTCGTCGAAATTCTCGAAGAACGAGGCCTTCTCGAGTCCATCACCAGCGACAGTCTCCGCTCTGCTTGTCTCAGCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACCGCCGAGAGCTTACATTTAGGTAATCTTCTTGGTCTCATCGTCCTCTCTTGGTTTCGCCGATGCGGCCACACCACCGTCGCTCTCATCGGCGGTGCCACTGCCCGCGTCGGCGATCCCTCAGGCAAGAGCCTTGAACGGCCAGAGCTCGATCTCCAGACCTTGGAGACCAACACTCTCGGAATTACAAATATTATAACTAGAATTTTGGGGAACTCGGGCTTGGATTCCAATTTTAGCTCTGATTTTGTGATTCTTAATAATTACGATTGGTGGAAGGAGTTCAGATTTCTAGATTTCTTGAAAGAAGTAGGTCGGTTTGCTAGAGTAGGAACGATGATGGCTAAGGAGAGCGTTAAGAGGAGATTGGAATCGGATCAAGGAATGAGCTATACTGAATTTACTTACCAGCTCTTGCAGGGATACGATTTTCTGTATCTGTATCAAAACCAGGGCGTTTCTGTTCAGATTGGAGGAAGTGATCAATGGGGGAATATCACTGCAGGGACTGAGCTCATTAGGAAAATTTTGCCACAGGCTGATGGCGTTTATGGCTTGACATTCCCTCTTCTTCTGAAGAGCGATGGCACCAAATTCGGCAAGTCCGTAGACGGCGCCATTTGGCTTTCGCCGTCGAAGTTATCTCCATACAAGTTTTATCAGTATTTCTTCAGTGTCCCAGATGCAGATGTGATTAGATTTCTCAGAATTCTCACGTTTTTGGATATTGAGGAGATTCGAGACTTGGAAAGTCAAATGGCTAGCCCTGGATATGTACCGAACACGGCGCAGAGGCGGCTGGCCGAAGAAGTTACTCGATTTGTTCATGGAGAAGATGGTTTGAATGAGGCCCTTGAGGCCACTGAAGCATTGAAACCAGGAGCAGAGACAAAGTTGGATTGGAAGACTATTGTGGGGATTGGTGAGGATGTTCCATGCTGCTCGTTGGAGTACGATCAAGTGTTGAATCTTTCGGTTGTCGATCTTGCAGTTATGTCTGGTTTGCTCGAAAGCAAGTCGGCTGCCCGTCGTTTGCTGAAGCAAGGGGGACTCTATTTGAATAACAGTAGAGTGGATTCTGAGAGTAAAAAAATTGAAGCTATAGACATTATTGATGGGAAAGTTCTACTTTTATCTGCAGGAAAGAAGAACAAGATGGTTGTGAGGATATCATAA

Protein sequence

MAMAASARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQTASRRNVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFSSDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQGYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGKKNKMVVRIS

Homology

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BLAST of Carg08047 vs. NCBI nr
Match: XP_022942360.1 (tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 944.1 bits (2439), Expect = 1.9e-271
Identity = 490/491 (99.80%), Postives = 491/491 (100.00%), Query Frame = 0


Query: 1   MAMAASARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQT 60
           MAMAASARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQT
Sbjct: 1   MAMAASARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQT 60

Query: 61  ASRRNVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR 120
           ASRRNVVEILEERGLLESITSD+LRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR
Sbjct: 61  ASRRNVVEILEERGLLESITSDNLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR 120

Query: 121 RCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS 180
           RCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS
Sbjct: 121 RCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS 180

Query: 181 SDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ 240
           SDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ
Sbjct: 181 SDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ 240

Query: 241 GYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFG 300
           GYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFG
Sbjct: 241 GYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFG 300

Query: 301 KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVP 360
           KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVP
Sbjct: 301 KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVP 360

Query: 361 NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ 420
           NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ
Sbjct: 361 NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ 420

Query: 421 VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSA 480
           VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSA
Sbjct: 421 VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSA 480

Query: 481 GKKNKMVVRIS 492
           GKKNKMVVRIS
Sbjct: 481 GKKNKMVVRIS 491

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BLAST of Carg08047 vs. NCBI nr
Match: XP_022989417.1 (tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 932.6 bits (2409), Expect = 5.6e-268
Identity = 483/491 (98.37%), Postives = 487/491 (99.19%), Query Frame = 0


Query: 1   MAMAASARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQT 60
           MAMAASARSS+TFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQT
Sbjct: 1   MAMAASARSSITFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQT 60

Query: 61  ASRRNVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR 120
           ASRRNVVEILEERGLLESITSD+LR ACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR
Sbjct: 61  ASRRNVVEILEERGLLESITSDNLRFACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR 120

Query: 121 RCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS 180
           RCGHT+VALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS
Sbjct: 121 RCGHTSVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS 180

Query: 181 SDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ 240
           SDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ
Sbjct: 181 SDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ 240

Query: 241 GYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFG 300
           GYDFLYLYQNQGV VQIGGSDQWGNITAGTELIRKILPQAD VYGLTFPLLLKSDGTKFG
Sbjct: 241 GYDFLYLYQNQGVCVQIGGSDQWGNITAGTELIRKILPQADAVYGLTFPLLLKSDGTKFG 300

Query: 301 KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVP 360
           KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQM SPGYVP
Sbjct: 301 KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMVSPGYVP 360

Query: 361 NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ 420
           NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ
Sbjct: 361 NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ 420

Query: 421 VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSA 480
           VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEA+DIIDGKVLLLSA
Sbjct: 421 VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAVDIIDGKVLLLSA 480

Query: 481 GKKNKMVVRIS 492
           GKKNKMVVRIS
Sbjct: 481 GKKNKMVVRIS 491

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BLAST of Carg08047 vs. NCBI nr
Match: XP_023535379.1 (tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 931.4 bits (2406), Expect = 1.3e-267
Identity = 483/491 (98.37%), Postives = 489/491 (99.59%), Query Frame = 0


Query: 1   MAMAASARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQT 60
           MAMAASARSS+TFLLSQRTLFFSNSIISSKPSL+FSLKSTFSCLASSASSLQSSTLEPQT
Sbjct: 1   MAMAASARSSITFLLSQRTLFFSNSIISSKPSLTFSLKSTFSCLASSASSLQSSTLEPQT 60

Query: 61  ASRRNVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR 120
           ASRRNVVEILEERGLLESITSD+LRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR
Sbjct: 61  ASRRNVVEILEERGLLESITSDNLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFR 120

Query: 121 RCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS 180
           RCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS
Sbjct: 121 RCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFS 180

Query: 181 SDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ 240
           S+FVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ
Sbjct: 181 SNFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQ 240

Query: 241 GYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFG 300
           GYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQAD VYGLTFPLLLKSDGTKFG
Sbjct: 241 GYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADAVYGLTFPLLLKSDGTKFG 300

Query: 301 KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVP 360
           KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEI+DLE+QMAS GYVP
Sbjct: 301 KSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIQDLENQMASAGYVP 360

Query: 361 NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ 420
           NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ
Sbjct: 361 NTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQ 420

Query: 421 VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSA 480
           VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSA
Sbjct: 421 VLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSA 480

Query: 481 GKKNKMVVRIS 492
           GKKNKMVVRIS
Sbjct: 481 GKKNKMVVRIS 491

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BLAST of Carg08047 vs. NCBI nr
Match: XP_022141006.1 (tyrosine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia] >XP_022141007.1 tyrosine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 825.1 bits (2130), Expect = 1.3e-235
Identity = 427/492 (86.79%), Postives = 457/492 (92.89%), Query Frame = 0


Query: 1   MAMAASARSSMTFLLSQRTLFFSNSIISSKPSLSF-SLKSTFSCLASSASSLQSSTLEPQ 60
           MA  ASA  S TFLLSQR+LFFS   ISSK ++SF S++S+  C+ASSASSLQSSTLEP 
Sbjct: 1   MAAIASACGSRTFLLSQRSLFFSTFNISSKSTVSFSSVRSSCRCIASSASSLQSSTLEPH 60

Query: 61  TASRRNVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWF 120
           +ASRRNVVEILEERGLLESITSD+LRSA LSPLKVYCGFDPTAESLHLGNLLGLIVLSWF
Sbjct: 61  SASRRNVVEILEERGLLESITSDNLRSASLSPLKVYCGFDPTAESLHLGNLLGLIVLSWF 120

Query: 121 RRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNF 180
           RRCGH TVALIGGATARVGDPSGKSLERPELDL+TLE NTLGITN I RILGNSG DSNF
Sbjct: 121 RRCGHATVALIGGATARVGDPSGKSLERPELDLKTLEANTLGITNSIARILGNSGSDSNF 180

Query: 181 SSDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLL 240
           S +FVILNNYDWWKEFRFLDFLK VGRFARVGTMMAKESV+RRLES+QGMSYTEFTYQLL
Sbjct: 181 SPNFVILNNYDWWKEFRFLDFLKGVGRFARVGTMMAKESVRRRLESEQGMSYTEFTYQLL 240

Query: 241 QGYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKF 300
           Q YDFL+L+QN+GVSVQIGGSDQWGNITAGTELIRKILP ADGVYGLTFPLLLKSDGTKF
Sbjct: 241 QAYDFLHLFQNEGVSVQIGGSDQWGNITAGTELIRKILPHADGVYGLTFPLLLKSDGTKF 300

Query: 301 GKSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYV 360
           GKS DGA+WLSPS LSPYKFYQYFFSVPDADV RFL+ILTFLD+++I+DLESQM S GYV
Sbjct: 301 GKSEDGAVWLSPSMLSPYKFYQYFFSVPDADVARFLKILTFLDMKDIQDLESQMGSSGYV 360

Query: 361 PNTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYD 420
           PNTAQRRLAEEVTRFVHGEDGL+EAL+ATEALKPGAETKLDWKTI GI EDVPCCSL YD
Sbjct: 361 PNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLGYD 420

Query: 421 QVLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLS 480
           QVLNL +VDL+V SGLLESKSAARRLLKQGGLYLNNSRVDSE K++EA DI+DGKVLLLS
Sbjct: 421 QVLNLLIVDLSVTSGLLESKSAARRLLKQGGLYLNNSRVDSEGKRVEAADIVDGKVLLLS 480

Query: 481 AGKKNKMVVRIS 492
           AGKKNK+VVRIS
Sbjct: 481 AGKKNKVVVRIS 492

[Close]

BLAST of Carg08047 vs. NCBI nr
Match: XP_016901583.1 (PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 784.3 bits (2024), Expect = 2.5e-223
Identity = 403/486 (82.92%), Postives = 439/486 (90.33%), Query Frame = 0


Query: 6   SARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQTASRRN 65
           S  +S  FLLSQR+ FFS   ISSKPS            ASS+ +  S    P  +   N
Sbjct: 12  SCYTSKAFLLSQRSFFFST--ISSKPSXXXXXXXXXXXXASSSPT--SLRYSPTPSPPTN 71

Query: 66  VVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHT 125
           V++ILE+RGLL+SITSD+LRSA LSPLKVYCGFDPTA+SLHLGNLLGLIVLSWFRRCGH+
Sbjct: 72  VIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHS 131

Query: 126 TVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFSSDFVI 185
           TVALIGGATAR+GDPSGKSLERPELDLQTLE NTLGITNIIT+ILGNSG DS+F  +F+I
Sbjct: 132 TVALIGGATARIGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCPNFLI 191

Query: 186 LNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQGYDFL 245
           LNNYDWWKEFRFLDFLK+VGRFARVG+M+AKESV+RRLES+QGMSYTEFTYQLLQGYDFL
Sbjct: 192 LNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQGYDFL 251

Query: 246 YLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKSVDG 305
           +LYQN+GVSVQIGGSDQWGNITAGTELIRK LPQADGVYGLTFPLLLKSDGTKFGKS DG
Sbjct: 252 HLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLLLKSDGTKFGKSEDG 311

Query: 306 AIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNTAQR 365
           AIWLSPS LSPYKFYQYFFSVPDADV+RFLRILTFLDIEEI+DLESQM  PGYVPNT QR
Sbjct: 312 AIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMTKPGYVPNTVQR 371

Query: 366 RLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVLNLS 425
           RLAEEVTRFVHGE+GL+EAL+ATEALKPGAETKLDWKTI GI EDVPCCSLEYDQVLNLS
Sbjct: 372 RLAEEVTRFVHGENGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLS 431

Query: 426 VVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGKKNK 485
           VVDL+V +GLLESKSAARRLLKQGGLYLNN RVDSESK++EA+D+IDGKVLLLSAGKKNK
Sbjct: 432 VVDLSVTTGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDVIDGKVLLLSAGKKNK 491

Query: 486 MVVRIS 492
           +VVRIS
Sbjct: 492 VVVRIS 493

[Close]

BLAST of Carg08047 vs. TAIR10
Match: AT3G02660.1 (Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)

HSP 1 Score: 647.1 bits (1668), Expect = 8.6e-186
Identity = 327/462 (70.78%), Postives = 381/462 (82.47%), Query Frame = 0


Query: 34  SFSLKSTFSCLASSASSLQSSTLEPQTASRRNVVEILEERGLLESITSDSLRSAC----L 93
           S S  + FS +  S  S  S   E Q   R NVV+ILEERGLLESITS++LRSAC    +
Sbjct: 53  STSTTTLFSSVKCSIHSTSSPETENQAVFRPNVVDILEERGLLESITSENLRSACSDPKV 112

Query: 94  SPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPE 153
           +PL+VYCGFDPTAESLHLGNLLG+IVLSWF+RCGH  V LIGGAT RVGDPSGKSLERPE
Sbjct: 113 APLRVYCGFDPTAESLHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPE 172

Query: 154 LDLQTLETNTLGITNIITRILGNSGLDSNFSSDFVILNNYDWWKEFRFLDFLKEVGRFAR 213
           LD  TLE N  GIT II +ILG+   + +    +VI NNYDWWK+   LDFL +VGRFAR
Sbjct: 173 LDADTLEKNIAGITKIIIKILGS---NPSPGGSYVIFNNYDWWKDMTMLDFLNKVGRFAR 232

Query: 214 VGTMMAKESVKRRLESDQGMSYTEFTYQLLQGYDFLYLYQNQGVSVQIGGSDQWGNITAG 273
           VGTMMAKESVK+RLES+QGMSYTEFTYQLLQ YDFL+L++N+G++VQIGGSDQWGNITAG
Sbjct: 233 VGTMMAKESVKKRLESEQGMSYTEFTYQLLQAYDFLHLFKNEGINVQIGGSDQWGNITAG 292

Query: 274 TELIRKILPQADGVYGLTFPLLLKSDGTKFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDA 333
           T+LIRKIL   +  YGLTFPLLLK+DGTKFGKS DGAIWLSPS LSPYKFYQYFFSVPD 
Sbjct: 293 TDLIRKILQAEEAAYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDV 352

Query: 334 DVIRFLRILTFLDIEEIRDLESQMASPGYVPNTAQRRLAEEVTRFVHGEDGLNEALEATE 393
           DVIRFL+ LTFL ++EI+ LE QM+ PGYVPNTAQ +LAEEVTRFVHGE+GL EA++ATE
Sbjct: 353 DVIRFLKTLTFLSLDEIKILEDQMSKPGYVPNTAQIKLAEEVTRFVHGEEGLKEAIKATE 412

Query: 394 ALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVLNLSVVDLAVMSGLLESKSAARRLLKQG 453
           AL+PGAETKLDW  I  I ED+P CSL  D+V  LS+VDL+V +GL ESKSAARR+LKQG
Sbjct: 413 ALRPGAETKLDWNLIERIAEDIPSCSLPIDRVSGLSIVDLSVSAGLFESKSAARRMLKQG 472

Query: 454 GLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGKKNKMVVRIS 492
           G Y+NN RVD E+K+++  DI++G+ L+LSAGKKNK+VVRIS
Sbjct: 473 GFYMNNERVDDENKRVDEEDIVEGRGLVLSAGKKNKVVVRIS 511

[Close]

BLAST of Carg08047 vs. Swiss-Prot
Match: sp|Q9M876|SYYM_ARATH (Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB2768 PE=2 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.5e-184
Identity = 327/462 (70.78%), Postives = 381/462 (82.47%), Query Frame = 0


Query: 34  SFSLKSTFSCLASSASSLQSSTLEPQTASRRNVVEILEERGLLESITSDSLRSAC----L 93
           S S  + FS +  S  S  S   E Q   R NVV+ILEERGLLESITS++LRSAC    +
Sbjct: 53  STSTTTLFSSVKCSIHSTSSPETENQAVFRPNVVDILEERGLLESITSENLRSACSDPKV 112

Query: 94  SPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPE 153
           +PL+VYCGFDPTAESLHLGNLLG+IVLSWF+RCGH  V LIGGAT RVGDPSGKSLERPE
Sbjct: 113 APLRVYCGFDPTAESLHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPE 172

Query: 154 LDLQTLETNTLGITNIITRILGNSGLDSNFSSDFVILNNYDWWKEFRFLDFLKEVGRFAR 213
           LD  TLE N  GIT II +ILG+   + +    +VI NNYDWWK+   LDFL +VGRFAR
Sbjct: 173 LDADTLEKNIAGITKIIIKILGS---NPSPGGSYVIFNNYDWWKDMTMLDFLNKVGRFAR 232

Query: 214 VGTMMAKESVKRRLESDQGMSYTEFTYQLLQGYDFLYLYQNQGVSVQIGGSDQWGNITAG 273
           VGTMMAKESVK+RLES+QGMSYTEFTYQLLQ YDFL+L++N+G++VQIGGSDQWGNITAG
Sbjct: 233 VGTMMAKESVKKRLESEQGMSYTEFTYQLLQAYDFLHLFKNEGINVQIGGSDQWGNITAG 292

Query: 274 TELIRKILPQADGVYGLTFPLLLKSDGTKFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDA 333
           T+LIRKIL   +  YGLTFPLLLK+DGTKFGKS DGAIWLSPS LSPYKFYQYFFSVPD 
Sbjct: 293 TDLIRKILQAEEAAYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDV 352

Query: 334 DVIRFLRILTFLDIEEIRDLESQMASPGYVPNTAQRRLAEEVTRFVHGEDGLNEALEATE 393
           DVIRFL+ LTFL ++EI+ LE QM+ PGYVPNTAQ +LAEEVTRFVHGE+GL EA++ATE
Sbjct: 353 DVIRFLKTLTFLSLDEIKILEDQMSKPGYVPNTAQIKLAEEVTRFVHGEEGLKEAIKATE 412

Query: 394 ALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVLNLSVVDLAVMSGLLESKSAARRLLKQG 453
           AL+PGAETKLDW  I  I ED+P CSL  D+V  LS+VDL+V +GL ESKSAARR+LKQG
Sbjct: 413 ALRPGAETKLDWNLIERIAEDIPSCSLPIDRVSGLSIVDLSVSAGLFESKSAARRMLKQG 472

Query: 454 GLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGKKNKMVVRIS 492
           G Y+NN RVD E+K+++  DI++G+ L+LSAGKKNK+VVRIS
Sbjct: 473 GFYMNNERVDDENKRVDEEDIVEGRGLVLSAGKKNKVVVRIS 511

[Close]

BLAST of Carg08047 vs. Swiss-Prot
Match: sp|Q6MC06|SYY_PARUW (Tyrosine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=tyrS PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 7.5e-131
Identity = 226/427 (52.93%), Postives = 314/427 (73.54%), Query Frame = 0


Query: 65  NVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGH 124
           NV+++L ERG ++++TS+ +R     P+KVYCGFDPTA+SLHLGNL+ ++ L+WF+R GH
Sbjct: 3   NVMDVLRERGFIDAVTSEEIRQLTNQPIKVYCGFDPTADSLHLGNLVAIMGLAWFQRFGH 62

Query: 125 TTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNF-SSDF 184
           T VA++GGAT  +GDPSGK+ ER  LD + ++ N  GI+  +  I     LD N  ++  
Sbjct: 63  TPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAI-----LDFNHPTAPA 122

Query: 185 VILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQGYD 244
           +ILNN DW+K F F+ FL++VG+  R+  M+AK+SVK RL S++GMS+TEF YQ+LQGYD
Sbjct: 123 IILNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYD 182

Query: 245 FLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKSV 304
           FL+L++N GV+V++GGSDQWGNITAGT+LIRK+   A   YG+TFPLL KSDG KFGKS 
Sbjct: 183 FLHLFENYGVTVELGGSDQWGNITAGTDLIRKV--HAKPAYGITFPLLTKSDGQKFGKSE 242

Query: 305 DGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNTA 364
            GA+WLSP KLS Y+FYQ+   V DADVI  +R+LTFLD+ EIR  E  M    YVP TA
Sbjct: 243 KGAVWLSPDKLSSYEFYQHLIRVEDADVINLMRMLTFLDMGEIRHYEQMMKEADYVPRTA 302

Query: 365 QRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVLN 424
           Q+RLAEE+TR VHGE+GL  A++ TE + PG++T L+   +  +  D+P C ++ + VLN
Sbjct: 303 QKRLAEEITRLVHGEEGLKIAIKVTEGVAPGSQTSLNADILEKLAADMPSCEMKLENVLN 362

Query: 425 LSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGKK 484
             ++DL V + L  SKS ARRLL+ GG+Y+NN +++ E+  I    +I  +++LL+AGKK
Sbjct: 363 KKLIDLLVETKLQTSKSEARRLLRNGGVYINNKKIEDENHIISVECLISSRLILLAAGKK 422

Query: 485 NKMVVRI 491
           NKM++R+
Sbjct: 423 NKMIIRL 422

[Close]

BLAST of Carg08047 vs. Swiss-Prot
Match: sp|A5UUZ9|SYY_ROSS1 (Tyrosine--tRNA ligase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=tyrS PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.1e-92
Identity = 183/427 (42.86%), Postives = 268/427 (62.76%), Query Frame = 0


Query: 66  VVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHT 125
           +++ L  RGLL   +           + +Y GFDP+A+SLH+G+LL L+ L+ F+R GHT
Sbjct: 4   ILDELRWRGLLYESSDGLDELLTRERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWGHT 63

Query: 126 TVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFSSDFVI 185
            +AL GG T  +GDPSGK+ ERP L  + +  N   I   + + L  +  D +     ++
Sbjct: 64  PIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKGQLAQFLDFNAGDHS----ALL 123

Query: 186 LNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQGYDFL 245
           LNN DW      +DFL++VG+   V  M+AK+SV+ R+ S+ G+S+TEF+Y LLQ YDF 
Sbjct: 124 LNNADWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMTSETGISFTEFSYMLLQAYDFA 183

Query: 246 YLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKSVDG 305
           YL+++ G  +Q GGSDQWGNITAG ELIR+ L Q    YGL +PL+ K+DGTKFGK+  G
Sbjct: 184 YLFEHYGCKLQAGGSDQWGNITAGIELIRRTLGQK--AYGLVYPLVTKADGTKFGKTESG 243

Query: 306 AIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNTAQR 365
           A+WL P + SPY+FYQ++++V DADV ++LR  T+L  +EI +LE   AS      TAQ+
Sbjct: 244 AVWLDPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSADEIEELERITASQP-ERRTAQQ 303

Query: 366 RLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVL--N 425
           RLA EVTR VHGE  L  A EA++AL  G+  +L    ++ I EDVP  +L         
Sbjct: 304 RLAREVTRMVHGETALARAEEASQALFGGSLARLSAGDVIDIFEDVPSTTLPRQDFEGDG 363

Query: 426 LSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGKK 485
             ++D+ +  G+  SKS ARR ++ GG+Y+NN +     +++   D IDG+ ++L  G+K
Sbjct: 364 FPLIDVLLRCGIATSKSDARRTIEGGGIYVNNIQCPDVGRRLTLNDSIDGQFIVLRKGRK 423

Query: 486 NKMVVRI 491
              +V++
Sbjct: 424 QYHLVKV 423

[Close]

BLAST of Carg08047 vs. Swiss-Prot
Match: sp|Q8A2S5|SYY_BACTN (Tyrosine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=tyrS PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 4.0e-92
Identity = 190/428 (44.39%), Postives = 269/428 (62.85%), Query Frame = 0


Query: 65  NVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGH 124
           N VE L  RG+L+ I   +        +  Y G DPTA+SLH+G+L G+++L   +RCGH
Sbjct: 2   NFVEELRWRGMLQDIMPGTEELLNKEQVTAYLGIDPTADSLHIGHLCGVMILRHLQRCGH 61

Query: 125 TTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFSSDFV 184
             +ALIGGAT  +GDPSGKS ER  L+ +TL  N   I   + + L     +S+  +   
Sbjct: 62  KPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFL---DFESDVPNRAE 121

Query: 185 ILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRL--ESDQGMSYTEFTYQLLQGY 244
           ++NNYDW KEF FLDF++EVG+   V  MMAK+SVKRRL  E+  G+S+TEFTYQLLQGY
Sbjct: 122 LVNNYDWMKEFSFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGY 181

Query: 245 DFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKS 304
           DFL+LY+ +G  +Q+GGSDQWGNIT G ELIR+       V+ LT PL+ K+DG KFGK+
Sbjct: 182 DFLHLYETKGCKLQMGGSDQWGNITTGAELIRR--TNGGEVFALTCPLITKADGGKFGKT 241

Query: 305 VDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNT 364
             G IWL P   SPYKFYQ++ +V D+D  R+++I T ++ EEI  L ++     ++   
Sbjct: 242 ESGNIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALVAEHQQAPHL-RA 301

Query: 365 AQRRLAEEVTRFVHGEDGLNEALEATEALKPGAET----KLDWKTIVGIGEDVPCCSLEY 424
            Q+RLA+EVT  VH E+  N A++A+  L   A +    KLD  T++ + E VP   +  
Sbjct: 302 LQKRLAKEVTIMVHSEEDYNAAVDASNILFGNATSESLRKLDEDTLLAVFEGVPQFEISR 361

Query: 425 DQVL-NLSVVDLAV-MSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVL 484
           D +   +  VDL V  + +  SK   R+L++ GG+ LN  ++++  + I   D++DGK L
Sbjct: 362 DALAEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITTADLLDGKYL 421

[Close]

BLAST of Carg08047 vs. Swiss-Prot
Match: sp|Q650K7|SYY_BACFR (Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=tyrS PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.3e-92
Identity = 192/432 (44.44%), Postives = 268/432 (62.04%), Query Frame = 0


Query: 65  NVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGH 124
           N VE L  RG++  +   +        +  Y G DPTA+SLH+G+L G+++L  F+RCGH
Sbjct: 2   NFVEELRWRGMVHDMMPGTEELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGH 61

Query: 125 TTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFSSDFV 184
             +ALIGGAT  +GDPSGKS ER  LD +TL  N   I   + + L     +S+  +   
Sbjct: 62  KPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFL---DFESDAPNRAE 121

Query: 185 ILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRL--ESDQGMSYTEFTYQLLQGY 244
           ++NNYDW KEF FLDF +EVG+   V  MMAKESVK+RL  E+  G+S+TEFTYQLLQGY
Sbjct: 122 LVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGY 181

Query: 245 DFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKS 304
           DFL+LY+ +G  +Q+GGSDQWGNIT GTELIR+        Y LT PL+ K+DG KFGK+
Sbjct: 182 DFLHLYETKGCKLQMGGSDQWGNITTGTELIRR--TNGGEAYALTCPLITKADGGKFGKT 241

Query: 305 VDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNT 364
             G IWL P   SPYKFYQ++ +V DAD  R+++I T LD  EI  L ++     ++   
Sbjct: 242 ESGNIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLVAEHNEAPHL-RV 301

Query: 365 AQRRLAEEVTRFVHGEDGLNEALEATEALKPGAET----KLDWKTIVGIGEDVPCCSLEY 424
            Q+RLA+EVT  VH E+  N A++A+  L   A +    KLD  T++ + E VP   +  
Sbjct: 302 LQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISR 361

Query: 425 DQVL-NLSVVDLAV-MSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVL 484
           D ++  +  VDL V  + +  SK   R+L++ GG+ LN  ++ +  + I   D++D K L
Sbjct: 362 DALVEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYL 421

Query: 485 LLSAGKKNKMVV 489
           L+  GKKN  ++
Sbjct: 422 LVQRGKKNYYLI 427

[Close]

BLAST of Carg08047 vs. TrEMBL
Match: tr|A0A1S4E026|A0A1S4E026_CUCME (Tyrosine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103494447 PE=3 SV=1)

HSP 1 Score: 784.3 bits (2024), Expect = 1.6e-223
Identity = 403/486 (82.92%), Postives = 439/486 (90.33%), Query Frame = 0


Query: 6   SARSSMTFLLSQRTLFFSNSIISSKPSLSFSLKSTFSCLASSASSLQSSTLEPQTASRRN 65
           S  +S  FLLSQR+ FFS   ISSKPS            ASS+ +  S    P  +   N
Sbjct: 12  SCYTSKAFLLSQRSFFFST--ISSKPSXXXXXXXXXXXXASSSPT--SLRYSPTPSPPTN 71

Query: 66  VVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHT 125
           V++ILE+RGLL+SITSD+LRSA LSPLKVYCGFDPTA+SLHLGNLLGLIVLSWFRRCGH+
Sbjct: 72  VIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHS 131

Query: 126 TVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDSNFSSDFVI 185
           TVALIGGATAR+GDPSGKSLERPELDLQTLE NTLGITNIIT+ILGNSG DS+F  +F+I
Sbjct: 132 TVALIGGATARIGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCPNFLI 191

Query: 186 LNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQGYDFL 245
           LNNYDWWKEFRFLDFLK+VGRFARVG+M+AKESV+RRLES+QGMSYTEFTYQLLQGYDFL
Sbjct: 192 LNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQGYDFL 251

Query: 246 YLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKSVDG 305
           +LYQN+GVSVQIGGSDQWGNITAGTELIRK LPQADGVYGLTFPLLLKSDGTKFGKS DG
Sbjct: 252 HLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLLLKSDGTKFGKSEDG 311

Query: 306 AIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNTAQR 365
           AIWLSPS LSPYKFYQYFFSVPDADV+RFLRILTFLDIEEI+DLESQM  PGYVPNT QR
Sbjct: 312 AIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMTKPGYVPNTVQR 371

Query: 366 RLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVLNLS 425
           RLAEEVTRFVHGE+GL+EAL+ATEALKPGAETKLDWKTI GI EDVPCCSLEYDQVLNLS
Sbjct: 372 RLAEEVTRFVHGENGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLS 431

Query: 426 VVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGKKNK 485
           VVDL+V +GLLESKSAARRLLKQGGLYLNN RVDSESK++EA+D+IDGKVLLLSAGKKNK
Sbjct: 432 VVDLSVTTGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDVIDGKVLLLSAGKKNK 491

Query: 486 MVVRIS 492
           +VVRIS
Sbjct: 492 VVVRIS 493

[Close]

BLAST of Carg08047 vs. TrEMBL
Match: tr|A0A0A0KU70|A0A0A0KU70_CUCSA (Tyrosine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_4G025150 PE=3 SV=1)

HSP 1 Score: 778.5 bits (2009), Expect = 9.0e-222
Identity = 387/434 (89.17%), Postives = 414/434 (95.39%), Query Frame = 0


Query: 58  PQTASRRNVVEILEERGLLESITSDSLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLS 117
           P  +   NV++ILE+RGLL+SITSD+LRSA LSPLKVYCGFDPTA+SLHLGNLLGLIVLS
Sbjct: 60  PTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLS 119

Query: 118 WFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDS 177
           WFRRCGH+TVALIGGATARVGDPSGKSLERPELDLQTLE NTLGITNIIT+ILGNSG DS
Sbjct: 120 WFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDS 179

Query: 178 NFSSDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQ 237
           +F  +FVILNNYDWWKEFRFLDFLK+VGRFARVG+M+AKESV+RRLES+QGMSYTEFTYQ
Sbjct: 180 DFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQ 239

Query: 238 LLQGYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGT 297
           LLQGYDFL+LYQN+GVSVQIGGSDQWGNITAGTELIRK LPQADGVYGLTFPLLLKSDGT
Sbjct: 240 LLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLLLKSDGT 299

Query: 298 KFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPG 357
           KFGKS DGAIWLSPS LSPYKFYQYFFSVPDADV+RFLRILTFLDIEEI+DLESQM  PG
Sbjct: 300 KFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMMKPG 359

Query: 358 YVPNTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLE 417
           YVPNTAQRRLAEEVTRFVHGEDGL EAL+ATEALKPGAETKLDWKTI GI EDVPCCSLE
Sbjct: 360 YVPNTAQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLE 419

Query: 418 YDQVLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLL 477
           YDQVLNLSVVDL+V SGLLESKSAARRLLKQGGLYLNN RVDSESK++EA+DI+DGKVLL
Sbjct: 420 YDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIVDGKVLL 479

Query: 478 LSAGKKNKMVVRIS 492
           LSAGKKNK+VVRIS
Sbjct: 480 LSAGKKNKVVVRIS 493

[Close]

BLAST of Carg08047 vs. TrEMBL
Match: tr|A0A1R3JCS9|A0A1R3JCS9_9ROSI (Tyrosine--tRNA ligase OS=Corchorus olitorius OX=93759 GN=COLO4_17457 PE=3 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 2.0e-197
Identity = 353/444 (79.50%), Postives = 395/444 (88.96%), Query Frame = 0


Query: 55   TLEP--QTASRRNVVEILEERGLLESITSDSLRSAC----LSPLKVYCGFDPTAESLHLG 114
            TLEP  Q  S  NVV+ILEERGLLESIT++++R AC      PL+ YCGFDPTAESLHLG
Sbjct: 598  TLEPKSQLGSPPNVVKILEERGLLESITNENIRLACSDQTAGPLRAYCGFDPTAESLHLG 657

Query: 115  NLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITR 174
            NLLGLIVLSWF+RCGH  VALIGGAT R+GDPSGKS ERPELDL+ LE N +GI + I +
Sbjct: 658  NLLGLIVLSWFQRCGHKAVALIGGATGRIGDPSGKSQERPELDLEALEKNIVGIMDTINK 717

Query: 175  ILG-NSGLDSNFSSDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQ 234
            IL  N+ L S  +S+FVILNNYDWWKE R LDFLK+VGR+ARVG+MM+KESVK+RLES+Q
Sbjct: 718  ILSKNANLGSQDNSNFVILNNYDWWKEVRLLDFLKQVGRYARVGSMMSKESVKKRLESEQ 777

Query: 235  GMSYTEFTYQLLQGYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLT 294
            GMSYTEFTYQLLQGYDFLYL++N+GV+VQIGGSDQWGNITAGTELIRKIL QA+G YGLT
Sbjct: 778  GMSYTEFTYQLLQGYDFLYLFKNEGVNVQIGGSDQWGNITAGTELIRKIL-QAEGAYGLT 837

Query: 295  FPLLLKSDGTKFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIR 354
            FPLLLKSDGTKFGKS DGAIWLSPS LSPYKFYQYFFSVPDADV+RFL+ILTFLD+EEI 
Sbjct: 838  FPLLLKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLKILTFLDMEEIN 897

Query: 355  DLESQMASPGYVPNTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGI 414
            +LES M  PGYVPNTAQRRLAEE+TRFVHGEDGLNEAL+ATEAL+PG+ETKLDWKTI GI
Sbjct: 898  ELESAMTRPGYVPNTAQRRLAEEITRFVHGEDGLNEALKATEALRPGSETKLDWKTIEGI 957

Query: 415  GEDVPCCSLEYDQVLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEA 474
             EDVP CSL YDQVLNLS++DL+V SGL +SKSAARRLLKQGG+YLNNSRV+ ESK IEA
Sbjct: 958  AEDVPSCSLPYDQVLNLSIIDLSVSSGLFDSKSAARRLLKQGGIYLNNSRVEKESKIIEA 1017

Query: 475  IDIIDGKVLLLSAGKKNKMVVRIS 492
             DI+DGKVLLLSAGKKNK+VVRIS
Sbjct: 1018 DDIVDGKVLLLSAGKKNKVVVRIS 1040

[Close]

BLAST of Carg08047 vs. TrEMBL
Match: tr|A0A1R3HWC9|A0A1R3HWC9_COCAP (Tyrosine--tRNA ligase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16552 PE=3 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 2.6e-197
Identity = 352/444 (79.28%), Postives = 395/444 (88.96%), Query Frame = 0


Query: 55   TLEP--QTASRRNVVEILEERGLLESITSDSLRSAC----LSPLKVYCGFDPTAESLHLG 114
            TLEP  Q  S  NVV+ILEERGLLESIT++++R AC      PL+ YCGFDPTAESLHLG
Sbjct: 613  TLEPKSQLGSPPNVVKILEERGLLESITNENIRLACSDQTAGPLRAYCGFDPTAESLHLG 672

Query: 115  NLLGLIVLSWFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITR 174
            NLLGLIVLSWF+RCGH  VALIGGAT R+GDPSGKS ERPELDL+ LE N +GI + I +
Sbjct: 673  NLLGLIVLSWFQRCGHKAVALIGGATGRIGDPSGKSQERPELDLEALEKNIVGIMDTINK 732

Query: 175  ILG-NSGLDSNFSSDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQ 234
            +L  N+ L S  +S+FVILNNYDWWKE R LDFLK+VGR+ARVG+MM+KESVK+RLES+Q
Sbjct: 733  VLSKNANLGSQDNSNFVILNNYDWWKEVRLLDFLKQVGRYARVGSMMSKESVKKRLESEQ 792

Query: 235  GMSYTEFTYQLLQGYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLT 294
            GMSYTEFTYQLLQGYDFLYL++N+GV+VQIGGSDQWGNITAGTELIRKIL QA+G YGLT
Sbjct: 793  GMSYTEFTYQLLQGYDFLYLFKNEGVNVQIGGSDQWGNITAGTELIRKIL-QAEGAYGLT 852

Query: 295  FPLLLKSDGTKFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIR 354
            FPLLLKSDGTKFGKS DGAIWLSPS LSPYKFYQYFFSVPDADV+RFL+ILTFLD+EEI 
Sbjct: 853  FPLLLKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLKILTFLDMEEIN 912

Query: 355  DLESQMASPGYVPNTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGI 414
            +LES M  PGYVPNTAQRRLAEE+TRFVHGEDGLNEAL+ATEAL+PG+ETKLDWKTI GI
Sbjct: 913  ELESAMTRPGYVPNTAQRRLAEEITRFVHGEDGLNEALKATEALRPGSETKLDWKTIEGI 972

Query: 415  GEDVPCCSLEYDQVLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEA 474
             EDVP CSL YDQVLNLS++DL+V SGL +SKSAARRLLKQGG+YLNNSRV+ ESK IEA
Sbjct: 973  AEDVPSCSLPYDQVLNLSIIDLSVSSGLFDSKSAARRLLKQGGIYLNNSRVEKESKIIEA 1032

Query: 475  IDIIDGKVLLLSAGKKNKMVVRIS 492
             DI+DGKVLLLSAGKKNK+VVRIS
Sbjct: 1033 DDIVDGKVLLLSAGKKNKVVVRIS 1055

[Close]

BLAST of Carg08047 vs. TrEMBL
Match: tr|A0A2P5CYK6|A0A2P5CYK6_PARAD (Tyrosine--tRNA ligase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_111740 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 3.8e-196
Identity = 371/489 (75.87%), Postives = 411/489 (84.05%), Query Frame = 0


Query: 16  SQRTLF---FSNSIISS-KPSLSFSLKSTFSCLASSASSLQSSTLEPQTASRRNVVEILE 75
           +QRTLF   F+N + SS + + S   +  FS L S+ + + S         R NVV+IL+
Sbjct: 21  NQRTLFHFPFTNPLYSSARTTPSLKARRLFSSLTSTQNDVVS---VESLRHRPNVVDILD 80

Query: 76  ERGLLESITSDSLRSAC----LSPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHTTV 135
           ERGLLES+TSD LR AC    L PLKVYCGFDPTA+SLHLGNLLG+IVLSWF+RCGH  V
Sbjct: 81  ERGLLESLTSDHLRVACSDPSLPPLKVYCGFDPTAQSLHLGNLLGIIVLSWFQRCGHQVV 140

Query: 136 ALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILG-----NSGLDSNFSSD 195
           ALIGGAT RVGDPSGKSLERPELD +TL  NT GIT II+RILG     N G DSN  S 
Sbjct: 141 ALIGGATVRVGDPSGKSLERPELDPETLVKNTKGITEIISRILGRTPISNPGSDSNLGS- 200

Query: 196 FVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQLLQGY 255
             ILNNYDWWKE R LDFLKEVGRFARVGTMMAKESV++RLES+QGMSYTEFTYQLLQGY
Sbjct: 201 VAILNNYDWWKEVRLLDFLKEVGRFARVGTMMAKESVRKRLESEQGMSYTEFTYQLLQGY 260

Query: 256 DFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGTKFGKS 315
           DFL+L+    VSVQIGGSDQWGNITAGTELIRKIL Q DG YGLTFPLLLKSDGTKFGKS
Sbjct: 261 DFLHLFDKMRVSVQIGGSDQWGNITAGTELIRKIL-QVDGAYGLTFPLLLKSDGTKFGKS 320

Query: 316 VDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPGYVPNT 375
            DGAIWLSPS LSP+KFYQYFFSVPD+DV+RFL+ILTFLD+EEI +LE  M  PGYVPNT
Sbjct: 321 EDGAIWLSPSMLSPFKFYQYFFSVPDSDVVRFLKILTFLDMEEIMELERDMKRPGYVPNT 380

Query: 376 AQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLEYDQVL 435
           AQRRLAEEVTRFVHGE+GL EAL+ATEAL+PGAETKLDW+TI GI EDVP C+L YDQVL
Sbjct: 381 AQRRLAEEVTRFVHGEEGLIEALKATEALRPGAETKLDWQTIEGIAEDVPSCALAYDQVL 440

Query: 436 NLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLLLSAGK 492
           NLS+VDL+V SGLLESKSAARRLLKQGGLYLNNSRVDSESK++EA DI+DGKVLLLSAGK
Sbjct: 441 NLSLVDLSVSSGLLESKSAARRLLKQGGLYLNNSRVDSESKRVEADDIVDGKVLLLSAGK 500

The following BLAST results are available for this feature:

BLAST of Carg08047 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022942360.1	1.9e-271	99.80	tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata]	[more]
XP_022989417.1	5.6e-268	98.37	tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita maxima]	[more]
XP_023535379.1	1.3e-267	98.37	tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]	[more]
XP_022141006.1	1.3e-235	86.79	tyrosine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia] >XP_022...	[more]
XP_016901583.1	2.5e-223	82.92	PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo]	[more]

BLAST of Carg08047 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02660.1	8.6e-186	70.78	Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial	[more]

BLAST of Carg08047 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M876\|SYYM_ARATH	1.5e-184	70.78	Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
sp\|Q6MC06\|SYY_PARUW	7.5e-131	52.93	Tyrosine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=...	[more]
sp\|A5UUZ9\|SYY_ROSS1	3.1e-92	42.86	Tyrosine--tRNA ligase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=tyrS PE=3 SV...	[more]
sp\|Q8A2S5\|SYY_BACTN	4.0e-92	44.39	Tyrosine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2...	[more]
sp\|Q650K7\|SYY_BACFR	5.3e-92	44.44	Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=tyrS P...	[more]

BLAST of Carg08047 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E026\|A0A1S4E026_CUCME	1.6e-223	82.92	Tyrosine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103494447 PE=3 SV=1	[more]
tr\|A0A0A0KU70\|A0A0A0KU70_CUCSA	9.0e-222	89.17	Tyrosine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_4G025150 PE=3 SV=1	[more]
tr\|A0A1R3JCS9\|A0A1R3JCS9_9ROSI	2.0e-197	79.50	Tyrosine--tRNA ligase OS=Corchorus olitorius OX=93759 GN=COLO4_17457 PE=3 SV=1	[more]
tr\|A0A1R3HWC9\|A0A1R3HWC9_COCAP	2.6e-197	79.28	Tyrosine--tRNA ligase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16552 PE=3 SV...	[more]
tr\|A0A2P5CYK6\|A0A2P5CYK6_PARAD	3.8e-196	75.87	Tyrosine--tRNA ligase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_111740 PE=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004812	aminoacyl-tRNA ligase activity
GO:0003723	RNA binding
GO:0005524	ATP binding
GO:0000166	nucleotide binding
GO:0004831	tyrosine-tRNA ligase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006418	tRNA aminoacylation for protein translation
GO:0006437	tyrosyl-tRNA aminoacylation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR024107	Tyr-tRNA-ligase_bac_1
IPR001412	aa-tRNA-synth_I_CS
IPR024088	Tyr-tRNA-ligase_bac-type
IPR002305	aa-tRNA-synth_Ic
IPR002942	S4_RNA-bd
IPR014729	Rossmann-like_a/b/a_fold
IPR036986	S4_RNA-bd_sf
IPR002307	Tyr-tRNA-ligase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
biological_process	GO:0006437	tyrosyl-tRNA aminoacylation
biological_process	GO:0006418	tRNA aminoacylation for protein translation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004831	tyrosine-tRNA ligase activity
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08047-RA	Carg08047-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002307	Tyrosine-tRNA ligase	PRINTS	PR01040	TRNASYNTHTYR	coord: 228..243 score: 51.67 coord: 284..296 score: 46.92 coord: 104..126 score: 34.64 coord: 249..271 score: 46.96
IPR002307	Tyrosine-tRNA ligase	TIGRFAM	TIGR00234	TIGR00234	coord: 65..489 e-value: 1.7E-106 score: 354.7
IPR002307	Tyrosine-tRNA ligase	CDD	cd00805	TyrRS_core	coord: 92..374 e-value: 2.94536E-106 score: 319.552
IPR036986	RNA-binding S4 domain superfamily	GENE3D	G3DSA:3.10.290.10		coord: 397..491 e-value: 4.5E-23 score: 82.8
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 37..290 e-value: 3.8E-92 score: 310.6
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 431..469 e-value: 3.4E-5 score: 23.4
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 424..490 score: 11.298
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 433..490 e-value: 9.3314E-6 score: 42.6218
IPR002305	Aminoacyl-tRNA synthetase, class Ic	PFAM	PF00579	tRNA-synt_1b	coord: 91..390 e-value: 2.6E-73 score: 246.8
None	No IPR available	GENE3D	G3DSA:1.10.240.10		coord: 291..396 e-value: 1.6E-33 score: 117.0
None	No IPR available	PANTHER	PTHR11766:SF0	TYROSINE--TRNA LIGASE, MITOCHONDRIAL	coord: 47..490
None	No IPR available	SUPERFAMILY	SSF55174	Alpha-L RNA-binding motif	coord: 393..489
None	No IPR available	SUPERFAMILY	SSF52374	Nucleotidylyl transferase	coord: 65..390
IPR024088	Tyrosine-tRNA ligase, bacterial-type	PANTHER	PTHR11766	TYROSYL-TRNA SYNTHETASE	coord: 47..490
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 100..110
IPR024107	Tyrosine-tRNA ligase, bacterial-type, type 1	HAMAP	MF_02006	Tyr_tRNA_synth_type1	coord: 64..490 score: 39.984

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08047	Cla010694	Watermelon (97103) v1	carwmB0369
Carg08047	Csa4G025150	Cucumber (Chinese Long) v2	carcuB0403
Carg08047	MELO3C017627	Melon (DHL92) v3.5.1	carmeB0384
Carg08047	ClCG07G017190	Watermelon (Charleston Gray)	carwcgB0373
Carg08047	CSPI04G04300	Wild cucumber (PI 183967)	carcpiB0408
Carg08047	Cucsa.093940	Cucumber (Gy14) v1	carcgyB0431
Carg08047	CmaCh04G003730	Cucurbita maxima (Rimu)	carcmaB0529
Carg08047	CmoCh04G003940	Cucurbita moschata (Rifu)	carcmoB0514
Carg08047	Lsi07G001370	Bottle gourd (USVL1VR-Ls)	carlsiB347
Carg08047	Cp4.1LG01g03350	Cucurbita pepo (Zucchini)	carcpeB0527
Carg08047	CsGy4G004210	Cucumber (Gy14) v2	carcgybB0382
Carg08047	MELO3C017627.2	Melon (DHL92) v3.6.1	carmedB0388
Carg08047	CsaV3_4G004390	Cucumber (Chinese Long) v3	carcucB0405
Carg08047	Cla97C07G144210	Watermelon (97103) v2	carwmbB0400
Carg08047	Bhi01G001987	Wax gourd	carwgoB0460

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08047	Wax gourd	carwgoB0456
Carg08047	Silver-seed gourd	carcarB406
Carg08047	Cucurbita maxima (Rimu)	carcmaB0526
Carg08047	Cucurbita moschata (Rifu)	carcmoB0509
Carg08047	Cucurbita pepo (Zucchini)	carcpeB0523
Carg08047	Bottle gourd (USVL1VR-Ls)	carlsiB339
Carg08047	Bottle gourd (USVL1VR-Ls)	carlsiB341
Carg08047	Watermelon (Charleston Gray)	carwcgB0367
Carg08047	Watermelon (97103) v1	carwmB0374