CsGy4G004210 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy4G004210
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Tyrosine--tRNA ligase
Location	Chr4 : 2762418 .. 2763899 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATGGCCATTTTTGCTTCTTCTTCATCTTCTTGTTACACCTCTAAAGCTTTCCTTCTCTCTCAACGTTCCTTCTTTTTCTCCACTATTTCATCCAAACCCTCTTCCTCCTTCTTCTTCAAACCCACTTCCCGTTTCTTCTCTTCTTCCTCTCCAACTTTTCTTCACTACTCACCAACCCCTTCTCCTCCCACCAACGTCATTCAAATCCTCGAACAACGCGGCCTTCTCGACTCCATCACCAGCGACAATCTCCGCTCCGCTTCTCTCTCCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACTGCCCAGAGCTTACATTTAGGTAATCTTCTTGGTTTAATCGTCCTCTCTTGGTTCCGCCGATGTGGCCACTCCACCGTCGCTCTTATCGGCGGCGCCACTGCCCGTGTCGGAGACCCCTCCGGCAAGAGCCTCGAGCGGCCCGAACTCGACCTCCAAACCTTGGAGGCTAATACTCTCGGAATTACTAATATTATCACTAAAATTTTGGGGAATTCGGGGTCGGATTCTGATTTTTGCCCTAATTTTGTGATTCTGAATAATTATGATTGGTGGAAGGAGTTTAGGTTTTTGGATTTCTTGAAAGATGTGGGTCGGTTTGCGAGAGTGGGATCCATGATTGCTAAGGAGAGTGTTAGGAGGAGATTGGAATCGGAGCAAGGAATGAGTTATACTGAGTTCACTTATCAGCTTTTGCAAGGGTATGATTTTCTTCATTTGTATCAAAACGAGGGTGTTTCTGTTCAGATTGGAGGTAGTGATCAATGGGGGAACATTACTGCTGGGACAGAGCTTATTAGGAAACGTTTGCCTCAAGGTGATGGCGTTTATGGTTTGACATTCCCTCTTCTTCTGAAGAGTGATGGCACCAAATTTGGTAAATCCGAAGACGGTGCTATTTGGCTTTCGCCGTCGATGTTATCTCCGTACAAGTTTTATCAGTATTTCTTCAGTGTTCCTGATGCTGATGTGGTGAGGTTTCTTAGAATTCTCACATTTTTGGATATTGAGGAGATTCAGGACTTGGAAAGCCAAATGGTGAAACCTGGGTATGTTCCTAACACTGTGCAGAGGCGGCTGGCCGAAGAAGTTACTCGGTTTGTTCATGGTGAAGATGGTTTACGTGAGGCCCTTAAGGCTACTGAAGCATTGAAACCAGGAGCAGAGACAAAGTTGGATTGGAAGACTATTGAAGGGATTGCTGAGGATGTTCCATGCTGCTCGTTGGAGTATGATCAAGTGTTGAACCTTTCGGTTGTCGATCTCTCAGTTACGTCTGGTTTGCTTGAAAGCAAGTCGGCTGCCCGTCGGTTACTGAAGCAAGGGGGACTTTATTTGAATAATGGTAGAGTGGATTCCGAGAGTAAAAGGGTTGAAGCTGTAGACATTATTGATGGAAAAGTTCTACTTTTATCTGCAGGAAAGAAGAACAAGGTGGTTGTAAGGATATCATAA

mRNA sequence

ATGGTGATGGCCATTTTTGCTTCTTCTTCATCTTCTTGTTACACCTCTAAAGCTTTCCTTCTCTCTCAACGTTCCTTCTTTTTCTCCACTATTTCATCCAAACCCTCTTCCTCCTTCTTCTTCAAACCCACTTCCCGTTTCTTCTCTTCTTCCTCTCCAACTTTTCTTCACTACTCACCAACCCCTTCTCCTCCCACCAACGTCATTCAAATCCTCGAACAACGCGGCCTTCTCGACTCCATCACCAGCGACAATCTCCGCTCCGCTTCTCTCTCCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACTGCCCAGAGCTTACATTTAGGTAATCTTCTTGGTTTAATCGTCCTCTCTTGGTTCCGCCGATGTGGCCACTCCACCGTCGCTCTTATCGGCGGCGCCACTGCCCGTGTCGGAGACCCCTCCGGCAAGAGCCTCGAGCGGCCCGAACTCGACCTCCAAACCTTGGAGGCTAATACTCTCGGAATTACTAATATTATCACTAAAATTTTGGGGAATTCGGGGTCGGATTCTGATTTTTGCCCTAATTTTGTGATTCTGAATAATTATGATTGGTGGAAGGAGTTTAGGTTTTTGGATTTCTTGAAAGATGTGGGTCGGTTTGCGAGAGTGGGATCCATGATTGCTAAGGAGAGTGTTAGGAGGAGATTGGAATCGGAGCAAGGAATGAGTTATACTGAGTTCACTTATCAGCTTTTGCAAGGGTATGATTTTCTTCATTTGTATCAAAACGAGGGTGTTTCTGTTCAGATTGGAGGTAGTGATCAATGGGGGAACATTACTGCTGGGACAGAGCTTATTAGGAAACGTTTGCCTCAAGGTGATGGCGTTTATGGTTTGACATTCCCTCTTCTTCTGAAGAGTGATGGCACCAAATTTGGTAAATCCGAAGACGGTGCTATTTGGCTTTCGCCGTCGATGTTATCTCCGTACAAGTTTTATCAGTATTTCTTCAGTGTTCCTGATGCTGATGTGGTGAGGTTTCTTAGAATTCTCACATTTTTGGATATTGAGGAGATTCAGGACTTGGAAAGCCAAATGGTGAAACCTGGGTATGTTCCTAACACTGTGCAGAGGCGGCTGGCCGAAGAAGTTACTCGGTTTGTTCATGGTGAAGATGGTTTACGTGAGGCCCTTAAGGCTACTGAAGCATTGAAACCAGGAGCAGAGACAAAGTTGGATTGGAAGACTATTGAAGGGATTGCTGAGGATGTTCCATGCTGCTCGTTGGAGTATGATCAAGTGTTGAACCTTTCGGTTGTCGATCTCTCAGTTACGTCTGGTTTGCTTGAAAGCAAGTCGGCTGCCCGTCGGTTACTGAAGCAAGGGGGACTTTATTTGAATAATGGTAGAGTGGATTCCGAGAGTAAAAGGGTTGAAGCTGTAGACATTATTGATGGAAAAGTTCTACTTTTATCTGCAGGAAAGAAGAACAAGGTGGTTGTAAGGATATCATAA

Coding sequence (CDS)

ATGGTGATGGCCATTTTTGCTTCTTCTTCATCTTCTTGTTACACCTCTAAAGCTTTCCTTCTCTCTCAACGTTCCTTCTTTTTCTCCACTATTTCATCCAAACCCTCTTCCTCCTTCTTCTTCAAACCCACTTCCCGTTTCTTCTCTTCTTCCTCTCCAACTTTTCTTCACTACTCACCAACCCCTTCTCCTCCCACCAACGTCATTCAAATCCTCGAACAACGCGGCCTTCTCGACTCCATCACCAGCGACAATCTCCGCTCCGCTTCTCTCTCCCCTCTCAAGGTCTATTGCGGCTTCGACCCCACTGCCCAGAGCTTACATTTAGGTAATCTTCTTGGTTTAATCGTCCTCTCTTGGTTCCGCCGATGTGGCCACTCCACCGTCGCTCTTATCGGCGGCGCCACTGCCCGTGTCGGAGACCCCTCCGGCAAGAGCCTCGAGCGGCCCGAACTCGACCTCCAAACCTTGGAGGCTAATACTCTCGGAATTACTAATATTATCACTAAAATTTTGGGGAATTCGGGGTCGGATTCTGATTTTTGCCCTAATTTTGTGATTCTGAATAATTATGATTGGTGGAAGGAGTTTAGGTTTTTGGATTTCTTGAAAGATGTGGGTCGGTTTGCGAGAGTGGGATCCATGATTGCTAAGGAGAGTGTTAGGAGGAGATTGGAATCGGAGCAAGGAATGAGTTATACTGAGTTCACTTATCAGCTTTTGCAAGGGTATGATTTTCTTCATTTGTATCAAAACGAGGGTGTTTCTGTTCAGATTGGAGGTAGTGATCAATGGGGGAACATTACTGCTGGGACAGAGCTTATTAGGAAACGTTTGCCTCAAGGTGATGGCGTTTATGGTTTGACATTCCCTCTTCTTCTGAAGAGTGATGGCACCAAATTTGGTAAATCCGAAGACGGTGCTATTTGGCTTTCGCCGTCGATGTTATCTCCGTACAAGTTTTATCAGTATTTCTTCAGTGTTCCTGATGCTGATGTGGTGAGGTTTCTTAGAATTCTCACATTTTTGGATATTGAGGAGATTCAGGACTTGGAAAGCCAAATGGTGAAACCTGGGTATGTTCCTAACACTGTGCAGAGGCGGCTGGCCGAAGAAGTTACTCGGTTTGTTCATGGTGAAGATGGTTTACGTGAGGCCCTTAAGGCTACTGAAGCATTGAAACCAGGAGCAGAGACAAAGTTGGATTGGAAGACTATTGAAGGGATTGCTGAGGATGTTCCATGCTGCTCGTTGGAGTATGATCAAGTGTTGAACCTTTCGGTTGTCGATCTCTCAGTTACGTCTGGTTTGCTTGAAAGCAAGTCGGCTGCCCGTCGGTTACTGAAGCAAGGGGGACTTTATTTGAATAATGGTAGAGTGGATTCCGAGAGTAAAAGGGTTGAAGCTGTAGACATTATTGATGGAAAAGTTCTACTTTTATCTGCAGGAAAGAAGAACAAGGTGGTTGTAAGGATATCATAA

Protein sequence

MVMAIFASSSSSCYTSKAFLLSQRSFFFSTISSKPSSSFFFKPTSRFFSSSSPTFLHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLLLSAGKKNKVVVRIS

Homology

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BLAST of CsGy4G004210 vs. NCBI nr
Match: XP_004146892.1 (PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Cucumis sativus] >KGN53185.1 hypothetical protein Csa_4G025150 [Cucumis sativus])

HSP 1 Score: 868.6 bits (2243), Expect = 1.0e-248
Identity = 435/440 (98.86%), Postives = 437/440 (99.32%), Query Frame = 0


Query: 54  TFLHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113
           T LHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL
Sbjct: 54  TSLHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113

Query: 114 GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173
           GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG
Sbjct: 114 GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173

Query: 174 NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233
           NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY
Sbjct: 174 NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233

Query: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLL 293
           TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQ DGVYGLTFPLL
Sbjct: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLL 293

Query: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353
           LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES
Sbjct: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353

Query: 354 QMVKPGYVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV 413
           QM+KPGYVPNT QRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV
Sbjct: 354 QMMKPGYVPNTAQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV 413

Query: 414 PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDII 473
           PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDI+
Sbjct: 414 PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIV 473

Query: 474 DGKVLLLSAGKKNKVVVRIS 494
           DGKVLLLSAGKKNKVVVRIS
Sbjct: 474 DGKVLLLSAGKKNKVVVRIS 493

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BLAST of CsGy4G004210 vs. NCBI nr
Match: XP_016901583.1 (PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 859.8 bits (2220), Expect = 4.7e-246
Identity = 430/440 (97.73%), Postives = 435/440 (98.86%), Query Frame = 0


Query: 54  TFLHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113
           T L YSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL
Sbjct: 54  TSLRYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113

Query: 114 GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173
           GLIVLSWFRRCGHSTVALIGGATAR+GDPSGKSLERPELDLQTLEANTLGITNIITKILG
Sbjct: 114 GLIVLSWFRRCGHSTVALIGGATARIGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173

Query: 174 NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233
           NSGSDSDFCPNF+ILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY
Sbjct: 174 NSGSDSDFCPNFLILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233

Query: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLL 293
           TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQ DGVYGLTFPLL
Sbjct: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLL 293

Query: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353
           LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES
Sbjct: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353

Query: 354 QMVKPGYVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV 413
           QM KPGYVPNTVQRRLAEEVTRFVHGE+GL EALKATEALKPGAETKLDWKTIEGIAEDV
Sbjct: 354 QMTKPGYVPNTVQRRLAEEVTRFVHGENGLSEALKATEALKPGAETKLDWKTIEGIAEDV 413

Query: 414 PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDII 473
           PCCSLEYDQVLNLSVVDLSVT+GLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVD+I
Sbjct: 414 PCCSLEYDQVLNLSVVDLSVTTGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDVI 473

Query: 474 DGKVLLLSAGKKNKVVVRIS 494
           DGKVLLLSAGKKNKVVVRIS
Sbjct: 474 DGKVLLLSAGKKNKVVVRIS 493

[Close]

BLAST of CsGy4G004210 vs. NCBI nr
Match: XP_022141006.1 (tyrosine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia] >XP_022141007.1 tyrosine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 782.7 bits (2020), Expect = 7.2e-223
Identity = 390/434 (89.86%), Postives = 410/434 (94.47%), Query Frame = 0


Query: 60  PTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLS 119
           P  +   NV++ILE+RGLL+SITSDNLRSASLSPLKVYCGFDPTA+SLHLGNLLGLIVLS
Sbjct: 59  PHSASRRNVVEILEERGLLESITSDNLRSASLSPLKVYCGFDPTAESLHLGNLLGLIVLS 118

Query: 120 WFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDS 179
           WFRRCGH+TVALIGGATARVGDPSGKSLERPELDL+TLEANTLGITN I +ILGNSGSDS
Sbjct: 119 WFRRCGHATVALIGGATARVGDPSGKSLERPELDLKTLEANTLGITNSIARILGNSGSDS 178

Query: 180 DFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQ 239
           +F PNFVILNNYDWWKEFRFLDFLK VGRFARVG+M+AKESVRRRLESEQGMSYTEFTYQ
Sbjct: 179 NFSPNFVILNNYDWWKEFRFLDFLKGVGRFARVGTMMAKESVRRRLESEQGMSYTEFTYQ 238

Query: 240 LLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGT 299
           LLQ YDFLHL+QNEGVSVQIGGSDQWGNITAGTELIRK LP  DGVYGLTFPLLLKSDGT
Sbjct: 239 LLQAYDFLHLFQNEGVSVQIGGSDQWGNITAGTELIRKILPHADGVYGLTFPLLLKSDGT 298

Query: 300 KFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPG 359
           KFGKSEDGA+WLSPSMLSPYKFYQYFFSVPDADV RFL+ILTFLD+++IQDLESQM   G
Sbjct: 299 KFGKSEDGAVWLSPSMLSPYKFYQYFFSVPDADVARFLKILTFLDMKDIQDLESQMGSSG 358

Query: 360 YVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLE 419
           YVPNT QRRLAEEVTRFVHGEDGL EALKATEALKPGAETKLDWKTIEGIAEDVPCCSL 
Sbjct: 359 YVPNTAQRRLAEEVTRFVHGEDGLSEALKATEALKPGAETKLDWKTIEGIAEDVPCCSLG 418

Query: 420 YDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLL 479
           YDQVLNL +VDLSVTSGLLESKSAARRLLKQGGLYLNN RVDSE KRVEA DI+DGKVLL
Sbjct: 419 YDQVLNLLIVDLSVTSGLLESKSAARRLLKQGGLYLNNSRVDSEGKRVEAADIVDGKVLL 478

Query: 480 LSAGKKNKVVVRIS 494
           LSAGKKNKVVVRIS
Sbjct: 479 LSAGKKNKVVVRIS 492

[Close]

BLAST of CsGy4G004210 vs. NCBI nr
Match: XP_022942360.1 (tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 780.4 bits (2014), Expect = 3.6e-222
Identity = 387/434 (89.17%), Postives = 412/434 (94.93%), Query Frame = 0


Query: 60  PTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLS 119
           P  +   NV++ILE+RGLL+SITSDNLRSA LSPLKVYCGFDPTA+SLHLGNLLGLIVLS
Sbjct: 58  PQTASRRNVVEILEERGLLESITSDNLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLS 117

Query: 120 WFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDS 179
           WFRRCGH+TVALIGGATARVGDPSGKSLERPELDLQTLE NTLGITNIIT+ILGNSG DS
Sbjct: 118 WFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDS 177

Query: 180 DFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQ 239
           +F  +FVILNNYDWWKEFRFLDFLK+VGRFARVG+M+AKESV+RRLES+QGMSYTEFTYQ
Sbjct: 178 NFSSDFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQ 237

Query: 240 LLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGT 299
           LLQGYDFL+LYQN+GVSVQIGGSDQWGNITAGTELIRK LPQ DGVYGLTFPLLLKSDGT
Sbjct: 238 LLQGYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADGVYGLTFPLLLKSDGT 297

Query: 300 KFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPG 359
           KFGKS DGAIWLSPS LSPYKFYQYFFSVPDADV+RFLRILTFLDIEEI+DLESQM  PG
Sbjct: 298 KFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIRDLESQMASPG 357

Query: 360 YVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLE 419
           YVPNT QRRLAEEVTRFVHGEDGL EAL+ATEALKPGAETKLDWKTI GI EDVPCCSLE
Sbjct: 358 YVPNTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLE 417

Query: 420 YDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLL 479
           YDQVLNLSVVDL+V SGLLESKSAARRLLKQGGLYLNN RVDSESK++EA+DIIDGKVLL
Sbjct: 418 YDQVLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLL 477

Query: 480 LSAGKKNKVVVRIS 494
           LSAGKKNK+VVRIS
Sbjct: 478 LSAGKKNKMVVRIS 491

[Close]

BLAST of CsGy4G004210 vs. NCBI nr
Match: XP_023535379.1 (tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 777.3 bits (2006), Expect = 3.0e-221
Identity = 386/434 (88.94%), Postives = 410/434 (94.47%), Query Frame = 0


Query: 60  PTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLS 119
           P  +   NV++ILE+RGLL+SITSDNLRSA LSPLKVYCGFDPTA+SLHLGNLLGLIVLS
Sbjct: 58  PQTASRRNVVEILEERGLLESITSDNLRSACLSPLKVYCGFDPTAESLHLGNLLGLIVLS 117

Query: 120 WFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDS 179
           WFRRCGH+TVALIGGATARVGDPSGKSLERPELDLQTLE NTLGITNIIT+ILGNSG DS
Sbjct: 118 WFRRCGHTTVALIGGATARVGDPSGKSLERPELDLQTLETNTLGITNIITRILGNSGLDS 177

Query: 180 DFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQ 239
           +F  NFVILNNYDWWKEFRFLDFLK+VGRFARVG+M+AKESV+RRLES+QGMSYTEFTYQ
Sbjct: 178 NFSSNFVILNNYDWWKEFRFLDFLKEVGRFARVGTMMAKESVKRRLESDQGMSYTEFTYQ 237

Query: 240 LLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGT 299
           LLQGYDFL+LYQN+GVSVQIGGSDQWGNITAGTELIRK LPQ D VYGLTFPLLLKSDGT
Sbjct: 238 LLQGYDFLYLYQNQGVSVQIGGSDQWGNITAGTELIRKILPQADAVYGLTFPLLLKSDGT 297

Query: 300 KFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPG 359
           KFGKS DGAIWLSPS LSPYKFYQYFFSVPDADV+RFLRILTFLDIEEIQDLE+QM   G
Sbjct: 298 KFGKSVDGAIWLSPSKLSPYKFYQYFFSVPDADVIRFLRILTFLDIEEIQDLENQMASAG 357

Query: 360 YVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLE 419
           YVPNT QRRLAEEVTRFVHGEDGL EAL+ATEALKPGAETKLDWKTI GI EDVPCCSLE
Sbjct: 358 YVPNTAQRRLAEEVTRFVHGEDGLNEALEATEALKPGAETKLDWKTIVGIGEDVPCCSLE 417

Query: 420 YDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLL 479
           YDQVLNLSVVDL+V SGLLESKSAARRLLKQGGLYLNN RVDSESK++EA+DIIDGKVLL
Sbjct: 418 YDQVLNLSVVDLAVMSGLLESKSAARRLLKQGGLYLNNSRVDSESKKIEAIDIIDGKVLL 477

Query: 480 LSAGKKNKVVVRIS 494
           LSAGKKNK+VVRIS
Sbjct: 478 LSAGKKNKMVVRIS 491

[Close]

BLAST of CsGy4G004210 vs. TAIR10
Match: AT3G02660.1 (Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)

HSP 1 Score: 653.3 bits (1684), Expect = 1.2e-187
Identity = 322/431 (74.71%), Postives = 371/431 (86.08%), Query Frame = 0


Query: 67  NVIQILEQRGLLDSITSDNLRSA----SLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFR 126
           NV+ ILE+RGLL+SITS+NLRSA     ++PL+VYCGFDPTA+SLHLGNLLG+IVLSWF+
Sbjct: 84  NVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIVLSWFQ 143

Query: 127 RCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFC 186
           RCGH  V LIGGAT RVGDPSGKSLERPELD  TLE N  GIT II KILG++ S     
Sbjct: 144 RCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGITKIIIKILGSNPSPGG-- 203

Query: 187 PNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQ 246
            ++VI NNYDWWK+   LDFL  VGRFARVG+M+AKESV++RLESEQGMSYTEFTYQLLQ
Sbjct: 204 -SYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQLLQ 263

Query: 247 GYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFG 306
            YDFLHL++NEG++VQIGGSDQWGNITAGT+LIRK L   +  YGLTFPLLLK+DGTKFG
Sbjct: 264 AYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGTKFG 323

Query: 307 KSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVP 366
           KSEDGAIWLSPSMLSPYKFYQYFFSVPD DV+RFL+ LTFL ++EI+ LE QM KPGYVP
Sbjct: 324 KSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSKPGYVP 383

Query: 367 NTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQ 426
           NT Q +LAEEVTRFVHGE+GL+EA+KATEAL+PGAETKLDW  IE IAED+P CSL  D+
Sbjct: 384 NTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSLPIDR 443

Query: 427 VLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLLLSA 486
           V  LS+VDLSV++GL ESKSAARR+LKQGG Y+NN RVD E+KRV+  DI++G+ L+LSA
Sbjct: 444 VSGLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVDEEDIVEGRGLVLSA 503

Query: 487 GKKNKVVVRIS 494
           GKKNKVVVRIS
Sbjct: 504 GKKNKVVVRIS 511

[Close]

BLAST of CsGy4G004210 vs. Swiss-Prot
Match: sp|Q9M876|SYYM_ARATH (Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB2768 PE=2 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 2.2e-186
Identity = 322/431 (74.71%), Postives = 371/431 (86.08%), Query Frame = 0


Query: 67  NVIQILEQRGLLDSITSDNLRSA----SLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFR 126
           NV+ ILE+RGLL+SITS+NLRSA     ++PL+VYCGFDPTA+SLHLGNLLG+IVLSWF+
Sbjct: 84  NVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPTAESLHLGNLLGIIVLSWFQ 143

Query: 127 RCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFC 186
           RCGH  V LIGGAT RVGDPSGKSLERPELD  TLE N  GIT II KILG++ S     
Sbjct: 144 RCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAGITKIIIKILGSNPSPGG-- 203

Query: 187 PNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQ 246
            ++VI NNYDWWK+   LDFL  VGRFARVG+M+AKESV++RLESEQGMSYTEFTYQLLQ
Sbjct: 204 -SYVIFNNYDWWKDMTMLDFLNKVGRFARVGTMMAKESVKKRLESEQGMSYTEFTYQLLQ 263

Query: 247 GYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFG 306
            YDFLHL++NEG++VQIGGSDQWGNITAGT+LIRK L   +  YGLTFPLLLK+DGTKFG
Sbjct: 264 AYDFLHLFKNEGINVQIGGSDQWGNITAGTDLIRKILQAEEAAYGLTFPLLLKNDGTKFG 323

Query: 307 KSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVP 366
           KSEDGAIWLSPSMLSPYKFYQYFFSVPD DV+RFL+ LTFL ++EI+ LE QM KPGYVP
Sbjct: 324 KSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVIRFLKTLTFLSLDEIKILEDQMSKPGYVP 383

Query: 367 NTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQ 426
           NT Q +LAEEVTRFVHGE+GL+EA+KATEAL+PGAETKLDW  IE IAED+P CSL  D+
Sbjct: 384 NTAQIKLAEEVTRFVHGEEGLKEAIKATEALRPGAETKLDWNLIERIAEDIPSCSLPIDR 443

Query: 427 VLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLLLSA 486
           V  LS+VDLSV++GL ESKSAARR+LKQGG Y+NN RVD E+KRV+  DI++G+ L+LSA
Sbjct: 444 VSGLSIVDLSVSAGLFESKSAARRMLKQGGFYMNNERVDDENKRVDEEDIVEGRGLVLSA 503

Query: 487 GKKNKVVVRIS 494
           GKKNKVVVRIS
Sbjct: 504 GKKNKVVVRIS 511

[Close]

BLAST of CsGy4G004210 vs. Swiss-Prot
Match: sp|Q6MC06|SYY_PARUW (Tyrosine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=tyrS PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.6e-131
Identity = 223/427 (52.22%), Postives = 313/427 (73.30%), Query Frame = 0


Query: 66  TNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCG 125
           TNV+ +L +RG +D++TS+ +R  +  P+KVYCGFDPTA SLHLGNL+ ++ L+WF+R G
Sbjct: 2   TNVMDVLRERGFIDAVTSEEIRQLTNQPIKVYCGFDPTADSLHLGNLVAIMGLAWFQRFG 61

Query: 126 HSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCPNF 185
           H+ VA++GGAT  +GDPSGK+ ER  LD + ++ N  GI+  +  IL  +   +      
Sbjct: 62  HTPVAIVGGATGMIGDPSGKNAERQLLDEKKIQLNLKGISKNLEAILDFNHPTAP----A 121

Query: 186 VILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQGYD 245
           +ILNN DW+K F F+ FL+DVG+  R+  M+AK+SV+ RL SE+GMS+TEF YQ+LQGYD
Sbjct: 122 IILNNLDWFKNFTFISFLRDVGKLFRLSPMLAKDSVKTRLNSEEGMSFTEFCYQILQGYD 181

Query: 246 FLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFGKSE 305
           FLHL++N GV+V++GGSDQWGNITAGT+LIRK        YG+TFPLL KSDG KFGKSE
Sbjct: 182 FLHLFENYGVTVELGGSDQWGNITAGTDLIRK--VHAKPAYGITFPLLTKSDGQKFGKSE 241

Query: 306 DGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVPNTV 365
            GA+WLSP  LS Y+FYQ+   V DADV+  +R+LTFLD+ EI+  E  M +  YVP T 
Sbjct: 242 KGAVWLSPDKLSSYEFYQHLIRVEDADVINLMRMLTFLDMGEIRHYEQMMKEADYVPRTA 301

Query: 366 QRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVLN 425
           Q+RLAEE+TR VHGE+GL+ A+K TE + PG++T L+   +E +A D+P C ++ + VLN
Sbjct: 302 QKRLAEEITRLVHGEEGLKIAIKVTEGVAPGSQTSLNADILEKLAADMPSCEMKLENVLN 361

Query: 426 LSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLLLSAGKK 485
             ++DL V + L  SKS ARRLL+ GG+Y+NN +++ E+  +    +I  +++LL+AGKK
Sbjct: 362 KKLIDLLVETKLQTSKSEARRLLRNGGVYINNKKIEDENHIISVECLISSRLILLAAGKK 421

Query: 486 NKVVVRI 493
           NK+++R+
Sbjct: 422 NKMIIRL 422

[Close]

BLAST of CsGy4G004210 vs. Swiss-Prot
Match: sp|Q8A2S5|SYY_BACTN (Tyrosine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) OX=226186 GN=tyrS PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.2e-93
Identity = 188/428 (43.93%), Postives = 268/428 (62.62%), Query Frame = 0


Query: 67  NVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGH 126
           N ++ L  RG+L  I        +   +  Y G DPTA SLH+G+L G+++L   +RCGH
Sbjct: 2   NFVEELRWRGMLQDIMPGTEELLNKEQVTAYLGIDPTADSLHIGHLCGVMILRHLQRCGH 61

Query: 127 STVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCPNFV 186
             +ALIGGAT  +GDPSGKS ER  L+ +TL  N   I   + K L     +SD      
Sbjct: 62  KPLALIGGATGMIGDPSGKSAERNLLNEETLRHNQACIKKQLAKFL---DFESDVPNRAE 121

Query: 187 ILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRL--ESEQGMSYTEFTYQLLQGY 246
           ++NNYDW KEF FLDF+++VG+   V  M+AK+SV+RRL  E+  G+S+TEFTYQLLQGY
Sbjct: 122 LVNNYDWMKEFSFLDFVREVGKHITVNYMMAKDSVKRRLNGEARDGLSFTEFTYQLLQGY 181

Query: 247 DFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFGKS 306
           DFLHLY+ +G  +Q+GGSDQWGNIT G ELIR+    G  V+ LT PL+ K+DG KFGK+
Sbjct: 182 DFLHLYETKGCKLQMGGSDQWGNITTGAELIRR--TNGGEVFALTCPLITKADGGKFGKT 241

Query: 307 EDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVPNT 366
           E G IWL P   SPYKFYQ++ +V D+D  R+++I T ++ EEI+ L ++  +  ++   
Sbjct: 242 ESGNIWLDPRYTSPYKFYQFWLNVSDSDAERYIKIFTSIEKEEIEALVAEHQQAPHL-RA 301

Query: 367 VQRRLAEEVTRFVHGEDGLREALKATEALKPGAET----KLDWKTIEGIAEDVPCCSLEY 426
           +Q+RLA+EVT  VH E+    A+ A+  L   A +    KLD  T+  + E VP   +  
Sbjct: 302 LQKRLAKEVTIMVHSEEDYNAAVDASNILFGNATSESLRKLDEDTLLAVFEGVPQFEISR 361

Query: 427 DQVL-NLSVVDLSV-TSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVL 486
           D +   +  VDL V  + +  SK   R+L++ GG+ LN  ++++  + +   D++DGK L
Sbjct: 362 DALAEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLEAFDQVITTADLLDGKYL 421

[Close]

BLAST of CsGy4G004210 vs. Swiss-Prot
Match: sp|Q650K7|SYY_BACFR (Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=tyrS PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 8.2e-93
Identity = 190/432 (43.98%), Postives = 267/432 (61.81%), Query Frame = 0


Query: 67  NVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGH 126
           N ++ L  RG++  +        +   +  Y G DPTA SLH+G+L G+++L  F+RCGH
Sbjct: 2   NFVEELRWRGMVHDMMPGTEELLAKEQVTAYVGIDPTADSLHIGHLCGVMILRHFQRCGH 61

Query: 127 STVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCPNFV 186
             +ALIGGAT  +GDPSGKS ER  LD +TL  N   I   + K L     +SD      
Sbjct: 62  KPLALIGGATGMIGDPSGKSAERNLLDEETLRHNQACIKKQLAKFL---DFESDAPNRAE 121

Query: 187 ILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRL--ESEQGMSYTEFTYQLLQGY 246
           ++NNYDW KEF FLDF ++VG+   V  M+AKESV++RL  E+  G+S+TEFTYQLLQGY
Sbjct: 122 LVNNYDWMKEFTFLDFAREVGKHITVNYMMAKESVKKRLNGEARDGLSFTEFTYQLLQGY 181

Query: 247 DFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFGKS 306
           DFLHLY+ +G  +Q+GGSDQWGNIT GTELIR+    G   Y LT PL+ K+DG KFGK+
Sbjct: 182 DFLHLYETKGCKLQMGGSDQWGNITTGTELIRR--TNGGEAYALTCPLITKADGGKFGKT 241

Query: 307 EDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVPNT 366
           E G IWL P   SPYKFYQ++ +V DAD  R+++I T LD  EI  L ++  +  ++   
Sbjct: 242 ESGNIWLDPRYTSPYKFYQFWLNVSDADAERYIKIFTSLDKAEIDGLVAEHNEAPHL-RV 301

Query: 367 VQRRLAEEVTRFVHGEDGLREALKATEALKPGAET----KLDWKTIEGIAEDVPCCSLEY 426
           +Q+RLA+EVT  VH E+    A+ A+  L   A +    KLD  T+  + E VP   +  
Sbjct: 302 LQKRLAKEVTVMVHSEEDYNAAVDASNILFGNATSDALKKLDEDTLLAVFEGVPQFEISR 361

Query: 427 DQVL-NLSVVDLSV-TSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVL 486
           D ++  +  VDL V  + +  SK   R+L++ GG+ LN  ++ +  + +   D++D K L
Sbjct: 362 DALVEGVKAVDLFVDNAAVFASKGEMRKLVQGGGVSLNKEKLAAFDQVITTADLLDEKYL 421

Query: 487 LLSAGKKNKVVV 491
           L+  GKKN  ++
Sbjct: 422 LVQRGKKNYYLI 427

[Close]

BLAST of CsGy4G004210 vs. Swiss-Prot
Match: sp|A5UUZ9|SYY_ROSS1 (Tyrosine--tRNA ligase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=tyrS PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 8.2e-93
Identity = 184/429 (42.89%), Postives = 268/429 (62.47%), Query Frame = 0


Query: 66  TNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCG 125
           T ++  L  RGLL   +       +   + +Y GFDP+A SLH+G+LL L+ L+ F+R G
Sbjct: 2   TTILDELRWRGLLYESSDGLDELLTRERVTLYIGFDPSADSLHIGHLLPLLTLARFQRWG 61

Query: 126 HSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCPNF 185
           H+ +AL GG T  +GDPSGK+ ERP L  + + AN   I   + + L  +  D     + 
Sbjct: 62  HTPIALAGGGTGLIGDPSGKTQERPLLSKEQVAANVEAIKGQLAQFLDFNAGDH----SA 121

Query: 186 VILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQGYD 245
           ++LNN DW      +DFL+DVG+   V  M+AK+SVR R+ SE G+S+TEF+Y LLQ YD
Sbjct: 122 LLLNNADWLTRLSLMDFLRDVGKHLTVNYMLAKDSVRSRMTSETGISFTEFSYMLLQAYD 181

Query: 246 FLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFGKSE 305
           F +L+++ G  +Q GGSDQWGNITAG ELIR+ L  G   YGL +PL+ K+DGTKFGK+E
Sbjct: 182 FAYLFEHYGCKLQAGGSDQWGNITAGIELIRRTL--GQKAYGLVYPLVTKADGTKFGKTE 241

Query: 306 DGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVPNTV 365
            GA+WL P   SPY+FYQ++++V DADV ++LR  T+L  +EI++LE ++        T 
Sbjct: 242 SGAVWLDPKRTSPYRFYQFWYNVDDADVGKYLRYFTWLSADEIEELE-RITASQPERRTA 301

Query: 366 QRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQVL- 425
           Q+RLA EVTR VHGE  L  A +A++AL  G+  +L    +  I EDVP  +L       
Sbjct: 302 QQRLAREVTRMVHGETALARAEEASQALFGGSLARLSAGDVIDIFEDVPSTTLPRQDFEG 361

Query: 426 -NLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLLLSAG 485
               ++D+ +  G+  SKS ARR ++ GG+Y+NN +     +R+   D IDG+ ++L  G
Sbjct: 362 DGFPLIDVLLRCGIATSKSDARRTIEGGGIYVNNIQCPDVGRRLTLNDSIDGQFIVLRKG 421

Query: 486 KKNKVVVRI 493
           +K   +V++
Sbjct: 422 RKQYHLVKV 423

[Close]

BLAST of CsGy4G004210 vs. TrEMBL
Match: tr|A0A0A0KU70|A0A0A0KU70_CUCSA (Tyrosine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_4G025150 PE=3 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 6.6e-249
Identity = 435/440 (98.86%), Postives = 437/440 (99.32%), Query Frame = 0


Query: 54  TFLHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113
           T LHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL
Sbjct: 54  TSLHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113

Query: 114 GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173
           GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG
Sbjct: 114 GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173

Query: 174 NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233
           NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY
Sbjct: 174 NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233

Query: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLL 293
           TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQ DGVYGLTFPLL
Sbjct: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLL 293

Query: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353
           LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES
Sbjct: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353

Query: 354 QMVKPGYVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV 413
           QM+KPGYVPNT QRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV
Sbjct: 354 QMMKPGYVPNTAQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV 413

Query: 414 PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDII 473
           PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDI+
Sbjct: 414 PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIV 473

Query: 474 DGKVLLLSAGKKNKVVVRIS 494
           DGKVLLLSAGKKNKVVVRIS
Sbjct: 474 DGKVLLLSAGKKNKVVVRIS 493

[Close]

BLAST of CsGy4G004210 vs. TrEMBL
Match: tr|A0A1S4E026|A0A1S4E026_CUCME (Tyrosine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103494447 PE=3 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 3.1e-246
Identity = 430/440 (97.73%), Postives = 435/440 (98.86%), Query Frame = 0


Query: 54  TFLHYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113
           T L YSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL
Sbjct: 54  TSLRYSPTPSPPTNVIQILEQRGLLDSITSDNLRSASLSPLKVYCGFDPTAQSLHLGNLL 113

Query: 114 GLIVLSWFRRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173
           GLIVLSWFRRCGHSTVALIGGATAR+GDPSGKSLERPELDLQTLEANTLGITNIITKILG
Sbjct: 114 GLIVLSWFRRCGHSTVALIGGATARIGDPSGKSLERPELDLQTLEANTLGITNIITKILG 173

Query: 174 NSGSDSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233
           NSGSDSDFCPNF+ILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY
Sbjct: 174 NSGSDSDFCPNFLILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSY 233

Query: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLL 293
           TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQ DGVYGLTFPLL
Sbjct: 234 TEFTYQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQADGVYGLTFPLL 293

Query: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353
           LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES
Sbjct: 294 LKSDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLES 353

Query: 354 QMVKPGYVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDV 413
           QM KPGYVPNTVQRRLAEEVTRFVHGE+GL EALKATEALKPGAETKLDWKTIEGIAEDV
Sbjct: 354 QMTKPGYVPNTVQRRLAEEVTRFVHGENGLSEALKATEALKPGAETKLDWKTIEGIAEDV 413

Query: 414 PCCSLEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDII 473
           PCCSLEYDQVLNLSVVDLSVT+GLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVD+I
Sbjct: 414 PCCSLEYDQVLNLSVVDLSVTTGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDVI 473

Query: 474 DGKVLLLSAGKKNKVVVRIS 494
           DGKVLLLSAGKKNKVVVRIS
Sbjct: 474 DGKVLLLSAGKKNKVVVRIS 493

[Close]

BLAST of CsGy4G004210 vs. TrEMBL
Match: tr|K7M864|K7M864_SOYBN (Tyrosine--tRNA ligase OS=Glycine max OX=3847 GN=100795726 PE=3 SV=1)

HSP 1 Score: 700.7 bits (1807), Expect = 2.4e-198
Identity = 359/431 (83.29%), Postives = 387/431 (89.79%), Query Frame = 0


Query: 71  ILEQRGLLDSITSDNLRSASLS--PLKVYCGFDPTAQSLHLGNLLGLIVLSWFRRCGHST 130
           ILE+RGL++SITSD LRSA L+  PLKVYCGFDPTA+SLHLGNLLGLIVLSWFRRCGH  
Sbjct: 63  ILEERGLVESITSDALRSACLTPPPLKVYCGFDPTAESLHLGNLLGLIVLSWFRRCGHRA 122

Query: 131 VALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNS------GSDSDFC 190
           VALIGGATARVGDPSGKSLERPELD +TLE N +GI+N I +ILG +      G DSD  
Sbjct: 123 VALIGGATARVGDPSGKSLERPELDAETLERNQMGISNTIHEILGRAQNSNLVGPDSD-- 182

Query: 191 PNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQ 250
            + VILNNY+WWKEF  LDFLK VGRFARVGSM+AKESVR+RLESEQGMSYTEFTYQLLQ
Sbjct: 183 SSVVILNNYNWWKEFSLLDFLKRVGRFARVGSMMAKESVRKRLESEQGMSYTEFTYQLLQ 242

Query: 251 GYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSDGTKFG 310
           GYDFLHL+QNEGVSVQIGGSDQWGNITAGTELIRK L Q +G YGLTFPLLLKSDGTKFG
Sbjct: 243 GYDFLHLFQNEGVSVQIGGSDQWGNITAGTELIRKIL-QVEGAYGLTFPLLLKSDGTKFG 302

Query: 311 KSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYVP 370
           KSEDGAIWLSP+ LSPYKFYQYFFSVPD DV+RFL+ILTFLDIEEI  LE +M KPGYVP
Sbjct: 303 KSEDGAIWLSPTFLSPYKFYQYFFSVPDDDVIRFLKILTFLDIEEIVSLEGEMGKPGYVP 362

Query: 371 NTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYDQ 430
           NT QRRLAEEVTRFVHGEDGL EALKATEAL+PG+ETKLDWKTIEGIAEDVP CSL YD 
Sbjct: 363 NTAQRRLAEEVTRFVHGEDGLAEALKATEALRPGSETKLDWKTIEGIAEDVPSCSLAYDA 422

Query: 431 VLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLLLSA 490
           VLNLS+VDLSV+SGL ESKSAARRLLKQGGLYLNN RVDSESKR+EA DI+DGKVLLLSA
Sbjct: 423 VLNLSLVDLSVSSGLFESKSAARRLLKQGGLYLNNNRVDSESKRIEAADIVDGKVLLLSA 482

Query: 491 GKKNKVVVRIS 494
           GKKNKV+VRI+
Sbjct: 483 GKKNKVLVRIA 490

[Close]

BLAST of CsGy4G004210 vs. TrEMBL
Match: tr|A0A059APG6|A0A059APG6_EUCGR (Tyrosine--tRNA ligase (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I01565 PE=3 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 3.1e-198
Identity = 349/436 (80.05%), Postives = 388/436 (88.99%), Query Frame = 0


Query: 64  PPTNVIQILEQRGLLDSITSDNLRSA--SLSPLKVYCGFDPTAQSLHLGNLLGLIVLSWF 123
           P  NV+ +LE+RGLL+S+TS+NLRSA  S S L+VYCGFDPTA+SLHLGNLLG+IVLSWF
Sbjct: 45  PRPNVVDVLEERGLLESVTSENLRSACSSGSGLRVYCGFDPTAESLHLGNLLGIIVLSWF 104

Query: 124 RRCGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGN----SGS 183
           RRCGH TVAL+GGATARVGDPSGKSLERPELDL+TLE NT GI   +T+ILG        
Sbjct: 105 RRCGHRTVALLGGATARVGDPSGKSLERPELDLETLERNTAGIAATVTRILGKXXXXXXX 164

Query: 184 DSDFCPNFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFT 243
                  FVILNNYDWWK+ + LDFLK VGR+ARVG+M+AKESV++RLESEQGMSYTEFT
Sbjct: 165 XXXXXXXFVILNNYDWWKDVKLLDFLKRVGRYARVGTMVAKESVKKRLESEQGMSYTEFT 224

Query: 244 YQLLQGYDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDGVYGLTFPLLLKSD 303
           YQLLQGYDFLHL+QNEGV+VQIGGSDQWGNITAGTELIRK L Q +G YGLTFPLLLKSD
Sbjct: 225 YQLLQGYDFLHLFQNEGVNVQIGGSDQWGNITAGTELIRKIL-QLEGAYGLTFPLLLKSD 284

Query: 304 GTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVK 363
           GTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPD D++RFL++LTFL+IEEI ++E  M +
Sbjct: 285 GTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDTDIIRFLKVLTFLEIEEINEIEKDMKR 344

Query: 364 PGYVPNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCS 423
           PGYVPNT QRRLAEEVTRFVHGEDGL+EALKATEAL+PGAETKLDWKTIEGIAEDVP CS
Sbjct: 345 PGYVPNTAQRRLAEEVTRFVHGEDGLQEALKATEALRPGAETKLDWKTIEGIAEDVPSCS 404

Query: 424 LEYDQVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKV 483
           L YD VLN S+VDLSV +GL+ESKSAARRLLKQGG+YLNNGRVD ESKR+EA DI+DGKV
Sbjct: 405 LNYDDVLNCSLVDLSVLAGLMESKSAARRLLKQGGMYLNNGRVDGESKRIEAEDIVDGKV 464

Query: 484 LLLSAGKKNKVVVRIS 494
           LLLSAGKKNKVVVRIS
Sbjct: 465 LLLSAGKKNKVVVRIS 479

[Close]

BLAST of CsGy4G004210 vs. TrEMBL
Match: tr|A0A2C9W3A4|A0A2C9W3A4_MANES (Tyrosine--tRNA ligase OS=Manihot esculenta OX=3983 GN=MANES_04G096400 PE=3 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 1.6e-197
Identity = 348/432 (80.56%), Postives = 390/432 (90.28%), Query Frame = 0


Query: 67  NVIQILEQRGLLDSITSDNLRSASL---SPLKVYCGFDPTAQSLHLGNLLGLIVLSWFRR 126
           NV+ ILE+RGLL+S+TSDNLRSAS    S LKVYCGFDPTA+SLHLGNLLG+IVLSWF+R
Sbjct: 78  NVVDILEERGLLESLTSDNLRSASSTSNSTLKVYCGFDPTAESLHLGNLLGIIVLSWFQR 137

Query: 127 CGHSTVALIGGATARVGDPSGKSLERPELDLQTLEANTLGITNIITKILGNSGSDSDFCP 186
           CGH  VALIGGATAR+GDPSGKSLERPELD+ TLE NTLGITN +T+I      + +   
Sbjct: 138 CGHKAVALIGGATARIGDPSGKSLERPELDVDTLEKNTLGITNALTRIF---NMNMNLNN 197

Query: 187 NFVILNNYDWWKEFRFLDFLKDVGRFARVGSMIAKESVRRRLESEQGMSYTEFTYQLLQG 246
           + V++NNYDWWKEFR LDFLK VGR+ARVG+MIAKESV++RLESEQGMSYTEF+YQLLQG
Sbjct: 198 SIVVMNNYDWWKEFRLLDFLKQVGRYARVGTMIAKESVKKRLESEQGMSYTEFSYQLLQG 257

Query: 247 YDFLHLYQNEGVSVQIGGSDQWGNITAGTELIRKRLPQGDG--VYGLTFPLLLKSDGTKF 306
           YDFL+L++NEGV+VQIGGSDQWGNITAGTELIRK L   DG   +GLTFPLLLKSDGTKF
Sbjct: 258 YDFLYLFKNEGVNVQIGGSDQWGNITAGTELIRKILQPQDGAEAHGLTFPLLLKSDGTKF 317

Query: 307 GKSEDGAIWLSPSMLSPYKFYQYFFSVPDADVVRFLRILTFLDIEEIQDLESQMVKPGYV 366
           GKSEDGAIWLSPS LSPYKFYQYFFSVPDADV+RFLRILTFLD++EI +LE +M +PGYV
Sbjct: 318 GKSEDGAIWLSPSFLSPYKFYQYFFSVPDADVIRFLRILTFLDLDEIDELEKEMKRPGYV 377

Query: 367 PNTVQRRLAEEVTRFVHGEDGLREALKATEALKPGAETKLDWKTIEGIAEDVPCCSLEYD 426
           PNT QRRLAEEVTRFVHGEDGL EALKATEAL+PGAETKLDWKTIEGIAEDVP CSL YD
Sbjct: 378 PNTAQRRLAEEVTRFVHGEDGLSEALKATEALRPGAETKLDWKTIEGIAEDVPSCSLAYD 437

Query: 427 QVLNLSVVDLSVTSGLLESKSAARRLLKQGGLYLNNGRVDSESKRVEAVDIIDGKVLLLS 486
           QVLNLS+VDLSV++GLLESKS+ARRLLKQGGLYLNN RVD+E+KR+E  DI+DGKVLLLS
Sbjct: 438 QVLNLSLVDLSVSAGLLESKSSARRLLKQGGLYLNNCRVDTENKRIEPEDIVDGKVLLLS 497

Query: 487 AGKKNKVVVRIS 494
           AGKKNKV+VRIS
Sbjct: 498 AGKKNKVIVRIS 506

The following BLAST results are available for this feature:

BLAST of CsGy4G004210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146892.1	1.0e-248	98.86	PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Cucumis sativus] >KGN5...	[more]
XP_016901583.1	4.7e-246	97.73	PREDICTED: tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucumis melo]	[more]
XP_022141006.1	7.2e-223	89.86	tyrosine--tRNA ligase, chloroplastic/mitochondrial [Momordica charantia] >XP_022...	[more]
XP_022942360.1	3.6e-222	89.17	tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata]	[more]
XP_023535379.1	3.0e-221	88.94	tyrosine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy4G004210 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02660.1	1.2e-187	74.71	Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial	[more]

BLAST of CsGy4G004210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M876\|SYYM_ARATH	2.2e-186	74.71	Tyrosine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
sp\|Q6MC06\|SYY_PARUW	2.6e-131	52.22	Tyrosine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25) OX=264201 GN=...	[more]
sp\|Q8A2S5\|SYY_BACTN	2.2e-93	43.93	Tyrosine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2...	[more]
sp\|Q650K7\|SYY_BACFR	8.2e-93	43.98	Tyrosine--tRNA ligase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=tyrS P...	[more]
sp\|A5UUZ9\|SYY_ROSS1	8.2e-93	42.89	Tyrosine--tRNA ligase OS=Roseiflexus sp. (strain RS-1) OX=357808 GN=tyrS PE=3 SV...	[more]

BLAST of CsGy4G004210 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KU70\|A0A0A0KU70_CUCSA	6.6e-249	98.86	Tyrosine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_4G025150 PE=3 SV=1	[more]
tr\|A0A1S4E026\|A0A1S4E026_CUCME	3.1e-246	97.73	Tyrosine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103494447 PE=3 SV=1	[more]
tr\|K7M864\|K7M864_SOYBN	2.4e-198	83.29	Tyrosine--tRNA ligase OS=Glycine max OX=3847 GN=100795726 PE=3 SV=1	[more]
tr\|A0A059APG6\|A0A059APG6_EUCGR	3.1e-198	80.05	Tyrosine--tRNA ligase (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I0156...	[more]
tr\|A0A2C9W3A4\|A0A2C9W3A4_MANES	1.6e-197	80.56	Tyrosine--tRNA ligase OS=Manihot esculenta OX=3983 GN=MANES_04G096400 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0004812	aminoacyl-tRNA ligase activity
GO:0005524	ATP binding
GO:0000166	nucleotide binding
GO:0004831	tyrosine-tRNA ligase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006418	tRNA aminoacylation for protein translation
GO:0006437	tyrosyl-tRNA aminoacylation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR024107	Tyr-tRNA-ligase_bac_1
IPR001412	aa-tRNA-synth_I_CS
IPR024088	Tyr-tRNA-ligase_bac-type
IPR036986	S4_RNA-bd_sf
IPR002942	S4_RNA-bd
IPR002305	aa-tRNA-synth_Ic
IPR014729	Rossmann-like_a/b/a_fold
IPR002307	Tyr-tRNA-ligase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006437	tyrosyl-tRNA aminoacylation
biological_process	GO:0006418	tRNA aminoacylation for protein translation
biological_process	GO:0009094	L-phenylalanine biosynthetic process
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006571	tyrosine biosynthetic process
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004831	tyrosine-tRNA ligase activity
molecular_function	GO:0004812	aminoacyl-tRNA ligase activity
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy4G004210.1	CsGy4G004210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002307	Tyrosine-tRNA ligase	PRINTS	PR01040	TRNASYNTHTYR	coord: 251..273 score: 47.25 coord: 230..245 score: 51.67 coord: 106..128 score: 34.2 coord: 286..298 score: 46.92
IPR002307	Tyrosine-tRNA ligase	TIGRFAM	TIGR00234	TIGR00234	coord: 66..491 e-value: 7.5E-106 score: 352.6
IPR002307	Tyrosine-tRNA ligase	CDD	cd00805	TyrRS_core	coord: 94..376 e-value: 1.17929E-105 score: 318.011
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 57..292 e-value: 7.8E-90 score: 303.0
IPR002305	Aminoacyl-tRNA synthetase, class Ic	PFAM	PF00579	tRNA-synt_1b	coord: 92..392 e-value: 4.4E-72 score: 242.8
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 434..472 e-value: 9.0E-6 score: 25.2
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 426..492 score: 11.751
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 433..492 e-value: 1.67084E-6 score: 44.933
IPR036986	RNA-binding S4 domain superfamily	GENE3D	G3DSA:3.10.290.10		coord: 399..493 e-value: 3.9E-23 score: 83.0
None	No IPR available	GENE3D	G3DSA:1.10.240.10		coord: 293..398 e-value: 2.1E-33 score: 116.5
None	No IPR available	PANTHER	PTHR11766:SF0	TYROSINE--TRNA LIGASE, MITOCHONDRIAL	coord: 58..492
None	No IPR available	SUPERFAMILY	SSF55174	Alpha-L RNA-binding motif	coord: 395..491
None	No IPR available	SUPERFAMILY	SSF52374	Nucleotidylyl transferase	coord: 67..392
IPR024088	Tyrosine-tRNA ligase, bacterial-type	PANTHER	PTHR11766	TYROSYL-TRNA SYNTHETASE	coord: 58..492
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 102..112
IPR024107	Tyrosine-tRNA ligase, bacterial-type, type 1	HAMAP	MF_02006	Tyr_tRNA_synth_type1	coord: 66..492 score: 40.139

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy4G004210	Cla010694	Watermelon (97103) v1	cgybwmB290
CsGy4G004210	Csa4G025150	Cucumber (Chinese Long) v2	cgybcuB165
CsGy4G004210	MELO3C017627	Melon (DHL92) v3.5.1	cgybmeB269
CsGy4G004210	ClCG07G017190	Watermelon (Charleston Gray)	cgybwcgB297
CsGy4G004210	CSPI04G04300	Wild cucumber (PI 183967)	cgybcpiB168
CsGy4G004210	CmaCh04G003730	Cucurbita maxima (Rimu)	cgybcmaB542
CsGy4G004210	CmoCh04G003940	Cucurbita moschata (Rifu)	cgybcmoB516
CsGy4G004210	Lsi07G001370	Bottle gourd (USVL1VR-Ls)	cgyblsiB277
CsGy4G004210	Cp4.1LG01g03350	Cucurbita pepo (Zucchini)	cgybcpeB503
CsGy4G004210	MELO3C017627.2	Melon (DHL92) v3.6.1	cgybmedB266
CsGy4G004210	CsaV3_4G004390	Cucumber (Chinese Long) v3	cgybcucB171
CsGy4G004210	Cla97C07G144210	Watermelon (97103) v2	cgybwmbB298
CsGy4G004210	Bhi01G001987	Wax gourd	cgybwgoB361
CsGy4G004210	Carg08047	Silver-seed gourd	carcgybB0382

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy4G004210	Cucumber (Chinese Long) v2	cgybcuB181
CsGy4G004210	Bottle gourd (USVL1VR-Ls)	cgyblsiB230
CsGy4G004210	Watermelon (Charleston Gray)	cgybwcgB266
CsGy4G004210	Wild cucumber (PI 183967)	cgybcpiB184
CsGy4G004210	Silver-seed gourd	carcgybB0708
CsGy4G004210	Silver-seed gourd	carcgybB0860
CsGy4G004210	Cucumber (Chinese Long) v3	cgybcucB184
CsGy4G004210	Watermelon (97103) v2	cgybwmbB255
CsGy4G004210	Cucumber (Gy14) v2	cgybcgybB126
CsGy4G004210	Cucurbita maxima (Rimu)	cgybcmaB493
CsGy4G004210	Cucurbita moschata (Rifu)	cgybcmoB464
CsGy4G004210	Cucurbita moschata (Rifu)	cgybcmoB497
CsGy4G004210	Cucurbita pepo (Zucchini)	cgybcpeB484