Lsi06G010620 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G010620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Exu regulon transcriptional regulator
Location	chr06 : 20827160 .. 20829987 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGTTACATGGGTTTTGTTTCTTTTGCTTTTTATTATGCATAAATGGAACAATAATTGTCATTTTTTCTTTTTTTTTGGTATGTTGTGAAGGTGTTCGCTTGGGGAATGGGATGATCAAGCTTGTTGGGCAGCTGGAAAAAACCCTTGTGAGTTTTTCTTTCAAAACTTTTCGTTCTACTGTCGGAATTTGTTCGAGTCTCGTATGATAACCATTTAGACTTCTTCATTATAGTGTTCTAATTTGAACCCATAGTCGAATTCTAAAAACAAAAGCGGTTTTTTCTTTTCAGAATTTGGATTCAATTTTGAAAAACTTTCTAAAAATGGATTATAAAGCAAAGAAATTCTTAAACGTAAGCGTGTTTATAAACTTAATTTTTACATTAAAATCAATTGGTTATCAGATGAAATGAAGTTTTAACTTTTTTGGTGGTTTTTTTTTTTTTTTTTTTTTTTGGCGCAAAATCTCTAATGTTGATATGGCTATTACATTAAATGCAGGAAGAGGAAAGTCCACTCATAGTAGAAGGTTTTAAGAAAATTACTCTATGTGAAAATGGGCATTGTAATTCAGGTATGCTGTTAGTGAACACTAGTGCAAATTTAAATCTTTTGATGACTTTTTTTTTTTTTTGTGTCTTTTTAGTTTTTTGATTTCGAAAAGTCAACTTATAAATTATAATATTTGTTTTGTTATTGTTGATGTCAAATTTTGGCTAAGGAAAAACGTATCTGACATTCATGTGACAACAACAATAAATTTATAATTTAAGGAAGAGAGGACCTGCAAAACAAATAAAAATGGCTCTGATGTCTAAGTCTGAAAAAGAAGAAGTTAGAAGTTTTTCAATACCTCATATGGAGTCATAATGGTTTATTTATAGAAGATTTGATCTAGAGTTTATCTTAATCCTAATAGGATAAGAGATTTAACCTTCACAGGATTAGGATATCAAATTTTCTTAATCCCAAGCAGGCTAAATCAAATCTTATCTTATTATATTTTATCTTACCTTTATCTTGATTTTGATTTTATTCTGCTGGATCAAAATTCACTCCTAACAGTTATGTTTTTATACTTAAAAGTCCAAATTTGTAAAATGAAAAAGTAGTTTTTTTTAAGTTAAAATTCAAAGGTATTTAAACTAACAAGTGAAAAATATATATATCTAAGTAAGCAAGTGAAAATTAAACCCCCAAAAAAGAATAAAATGTTCAAATTTGATGCATTAAATTTGTGTCGAGAAACATTAATAAAACATCATTAAAAAAAACAACTAAAATGGGACATAATTTTCAGACATTAATATTGTATACGTCTTGAAATCTGAAGTGGGTTTGACATTTATGATGCAGGAAACAATAGAAAACTTCTGACTGCGACTTCACCAATACCATCATCTTCAACAAGGGTTAGTCATCCATCACTTCCAACATTTTTAGAAACATTTTTAAAAACATTCATCAATCATTTACTCAAATTAAAACTGCTTGTGTTTTTCACAATTTTTTATGGTTGTTATTATGTAAACATTTGAATAAGTAAAAATGGATATTAATTGAAGAAGAAATAACATTGTAAGGGTGATCTCTCTAGAACGCTTGTTCTGATATCATCTTAAATTATTGATTGACTCAAAAAACTTAAATCAACGAAGTGAAAGAAAATTTAATATTATATCATCTAACACTTTCAAAACAAAATTTTTAAAAACTACGTATTTTTATTTAGGCTTATTTGATAACCATTCGTTTAGCCTGTTTTCTCTCAACTTCATACCATGATTTTCATCCGTAAAAGAGTTAGTTGAAATCTTAGCCAAATTTCAAAATAAATCTTTATAGAGTTAAGTGGAAGAGGTGTTTATAGAATTAATTTTCAAAAACTAATAATCATAAACCCAAATACTTTTTATAAGGGAAATTTTCACAAATAGAAAAAATGTCAAACTATTTACAGAAAATAGCGAAAAAAAACACTGTTAGACATTAATAGACTTCTATCAGCATCTATCAGTGATAGACTTCTATCATTTATATCTATGATAGACCCTAATAGACTTCGTTCTATCAGCGTCTATCACAACTATCTAAAAATTTTACTATTTTCTGTAAATAGTTTCCCTTATTTTTTTAAAAAAAAAAAAAATTCTCCTTTTTATAAACTTAAATTTAGAACCCTAAGAACTTAAATGAACTAAAGTTGTTAGCTTTAAAGTTGAAATCTAATTCCATCCATAGATACATATTTTATGATTTGAAACACAAATCTTCAACATTCTTTTTGATCATAATATAATCAATTACTAAAGATTTTAACACAAATCATTCAAAACCCAAGAAACTTAATGATTGAATTAATAGTTTTTGTGCTCCTAATACAGAATAATGATGAAGAAGCAAACAAAAAGGGCAAGCCCATGTCATCAAATAAAGAAGAACCAAGTGTGAAAAAGAAGAACAATTTGGAGAATTCAGAGGCAGATCAACTTGACCTTGTAGACATTGCAGAAATGGACTATTCTCCAGCAAAAAGAAAGCCTCCAATACATAACTGATCCCAAAATGAAAGGAACAAACAACAAGCAAAAACAAGACAAATTACAACAAGCCAACAATTAAATTATTATTATTATTATTAAAATTAAAATTAAAATTAAGAGAGCTCTATATATTCAAGAGATTATTAAAAATTGGCATTAAAAGACAGCCTTACAGAAATGCGGCAGGTTTTTTAGGGTTTAGCTTAGGGAAAACTGTCTTTTTGTACATAGCATTATTATTACTAAAACTAAATGCTATATTATTATTATTATTATTATTA

mRNA sequence

TTTTTGTTACATGGGTTTTGTTTCTTTTGCTTTTTATTATGCATAAATGGAACAATAATTGTCATTTTTTCTTTTTTTTTGGTATGTTGTGAAGGTGTTCGCTTGGGGAATGGGATGATCAAGCTTGTTGGGCAGCTGGAAAAAACCCTTGAAGAGGAAAGTCCACTCATAGTAGAAGGTTTTAAGAAAATTACTCTATGTGAAAATGGGCATTGTAATTCAGGTATGCTTGGGTTTGACATTTATGATGCAGGAAACAATAGAAAACTTCTGACTGCGACTTCACCAATACCATCATCTTCAACAAGGAATAATGATGAAGAAGCAAACAAAAAGGGCAAGCCCATGTCATCAAATAAAGAAGAACCAAGTGTGAAAAAGAAGAACAATTTGGAGAATTCAGAGGCAGATCAACTTGACCTTGTAGACATTGCAGAAATGGACTATTCTCCAGCAAAAAGAAAGCCTCCAATACATAACTGATCCCAAAATGAAAGGAACAAACAACAAGCAAAAACAAGACAAATTACAACAAGCCAACAATTAAATTATTATTATTATTATTAAAATTAAAATTAAAATTAAGAGAGCTCTATATATTCAAGAGATTATTAAAAATTGGCATTAAAAGACAGCCTTACAGAAATGCGGCAGGTTTTTTAGGGTTTAGCTTAGGGAAAACTGTCTTTTTGTACATAGCATTATTATTACTAAAACTAAATGCTATATTATTATTATTATTATTATTA

Coding sequence (CDS)

TTTTTGTTACATGGGTTTTGTTTCTTTTGCTTTTTATTATGCATAAATGGAACAATAATTGTCATTTTTTCTTTTTTTTTGGTATGTTGTGAAGGTGTTCGCTTGGGGAATGGGATGATCAAGCTTGTTGGGCAGCTGGAAAAAACCCTTGAAGAGGAAAGTCCACTCATAGTAGAAGGTTTTAAGAAAATTACTCTATGTGAAAATGGGCATTGTAATTCAGGTATGCTTGGGTTTGACATTTATGATGCAGGAAACAATAGAAAACTTCTGACTGCGACTTCACCAATACCATCATCTTCAACAAGGAATAATGATGAAGAAGCAAACAAAAAGGGCAAGCCCATGTCATCAAATAAAGAAGAACCAAGTGTGAAAAAGAAGAACAATTTGGAGAATTCAGAGGCAGATCAACTTGACCTTGTAGACATTGCAGAAATGGACTATTCTCCAGCAAAAAGAAAGCCTCCAATACATAACTGA

Protein sequence

FLLHGFCFFCFLLCINGTIIVIFSFFLVCCEGVRLGNGMIKLVGQLEKTLEEESPLIVEGFKKITLCENGHCNSGMLGFDIYDAGNNRKLLTATSPIPSSSTRNNDEEANKKGKPMSSNKEEPSVKKKNNLENSEADQLDLVDIAEMDYSPAKRKPPIHN

Homology

[Close]

BLAST of Lsi06G010620 vs. TrEMBL
Match: A0A0A0LYZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264570 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30
Identity = 92/154 (59.74%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 19  IIVIFSFFLVCCEGVRLGNGMI-KLVGQLEKTLEEESPLIVEGFKKITLCENGHCNSGML 78
           ++++F F     +G+RLGNG+I KLVGQLEKTLEE     VEG K+ T+CENGHCNSG  
Sbjct: 15  LLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEE-----VEGLKETTICENGHCNSG-- 74

Query: 79  GFDIYDAGNNRKLLTATSP-IPSSST---RNNDEEANKKGKPMSSNKEEPS-VKKKNNLE 138
                   NNRKL+T T+P IPSS T   RNN+    K   P SSNKEE S VKKK+NLE
Sbjct: 75  --------NNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLE 134

Query: 139 NSEADQ------LDLVDIAEMDYSPAKRKPPIHN 161
           NSEA        LDL+DIAEMDYSPAKRKPPIHN
Sbjct: 135 NSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Lsi06G010620 vs. TrEMBL
Match: D7T500_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00650 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-08
Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 1


Query: 19  IIVIFSFFLVCCEGVRLGNGMIKLVGQLEKTLEEESPLIVEG----FKKITLCENGHCNS 78
           ++++ S  L   +G+RL  G     G  +  +EE SP+ +        ++TLC +GHC+S
Sbjct: 9   LLLLLSLILSQVQGIRLDKGFSS-AGHQKIQVEEGSPIKITSNGGLVGEVTLCRDGHCSS 68

Query: 79  GMLGFDIYDAGNNRKLLTATSPIPSSSTRNNDEEANKKGKPMSSNKEEPSVKKKNNLEN- 138
           G+          NRKL+T T+   S++   N +     GK   S  + P  +++N   N 
Sbjct: 69  GI----------NRKLMTKTTSTSSTTPTTNSKNVKNGGK---SGDQVPGREEENFYVNA 128

Query: 139 ---SEADQL------DLVDIAEMDYSPAKRKPPIHN 161
              SE  +       D++DIA MDYSPA+RKPPIHN
Sbjct: 129 SPVSEHPEAAPEGYPDIIDIAGMDYSPARRKPPIHN 150

[Close]

BLAST of Lsi06G010620 vs. TrEMBL
Match: B9T2N9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0510210 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-08
Identity = 55/147 (37.41%), Postives = 71/147 (48.30%), Query Frame = 1


Query: 31  EGVRLGNGMIKLVGQLEKTLEEESPLI---VEGFKKITLCENGHCNSGMLGFDIYDAGNN 90
           +G+RL  G +++  Q     EE+S LI     G  ++ +C+ GHC            G N
Sbjct: 21  KGIRLEKGFMQVEHQKLHDKEEKSSLINRSTGGIGEVIICKEGHCT-----------GMN 80

Query: 91  RKLLT----ATSPIPSSSTRNNDEEANKKGKPM----SSN------KEEPSVKKKNNLEN 150
           RKL T    ATS   +S+T  N E    K  PM    SSN       E+ ++    N E+
Sbjct: 81  RKLTTVITSATSTSTTSTTSKNKENGGTKANPMTKGISSNGEVGEEHEKFTINSSPNSEH 140

Query: 151 SEADQLDLVDIAEMDYSPAKRKPPIHN 161
            E      VDI  MDYSPAKRKPPIHN
Sbjct: 141 QEVTHDSFVDI--MDYSPAKRKPPIHN 154

[Close]

BLAST of Lsi06G010620 vs. TrEMBL
Match: A0A0D2THB0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G013100 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 9.0e-08
Identity = 55/161 (34.16%), Postives = 78/161 (48.45%), Query Frame = 1


Query: 14  CINGTIIVIFSFFLVCCEGVRLGNGMIKLVGQLEKTLEEESPLIVEGFK-KITLCENGHC 73
           C+     ++   FL   EG+RL  G  K  G   K  EE    I  G    +  C+ G C
Sbjct: 5   CLEAVCFLVLFIFLYSVEGIRL-EGSFKSSGHDVKLHEEALMKISNGVMGDVIFCKQGQC 64

Query: 74  NSGMLGFDIYDAGNNRKLLTATSPIP----SSSTRNNDEEANKKGKPM----SSNKEEPS 133
                       GN+RKLLTAT+       S+S+++ D    KK  P     S N+E   
Sbjct: 65  R-----------GNSRKLLTATTTATTTASSTSSKSEDGGDYKKANPTTRVKSGNQENGE 124

Query: 134 VKKKNNLENSEADQ-----LDLVDIAEMDYSPAKRKPPIHN 161
            ++K ++ +  + +      D+++IAEMDYSPAKRKPPIHN
Sbjct: 125 KQEKVSVSSPTSSEQQDQYADIMEIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Lsi06G010620 vs. TrEMBL
Match: A5C0C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018845 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-07
Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 1


Query: 19  IIVIFSFFLVCCEGVRLGNGMIKLVGQLEKTLEEESPLIVEG----FKKITLCENGHCNS 78
           ++++ S  L   +G+RL  G     G  +  ++E SP+ +        ++TLC +GHC+S
Sbjct: 10  LLLLLSLILSQVQGIRLEKGFSS-AGHQKIQVKEGSPIKITSNGGLVGEVTLCRDGHCSS 69

Query: 79  GMLGFDIYDAGNNRKLLTATSPIPSSSTRNNDEEANKKGKPMSSNKEEPSVKKKNNLEN- 138
           G+          NRKL+T T+   S++   N +     GK   S  + P  +++N   N 
Sbjct: 70  GI----------NRKLMTKTTSTSSTTPTTNSKNVKNGGK---SGDQVPGREEENFYVNA 129

Query: 139 ---SEADQL------DLVDIAEMDYSPAKRKPPIHN 161
              SE  +       D++DIA MDYSPA+RKPPIHN
Sbjct: 130 SPVSEHPEAAPEGYPDIIDIAGMDYSPARRKPPIHN 151

[Close]

BLAST of Lsi06G010620 vs. NCBI nr
Match: gi|449458005|ref|XP_004146738.1| (PREDICTED: uncharacterized protein LOC101204556 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 5.4e-30
Identity = 92/154 (59.74%), Postives = 106/154 (68.83%), Query Frame = 1


Query: 19  IIVIFSFFLVCCEGVRLGNGMI-KLVGQLEKTLEEESPLIVEGFKKITLCENGHCNSGML 78
           ++++F F     +G+RLGNG+I KLVGQLEKTLEE     VEG K+ T+CENGHCNSG  
Sbjct: 15  LLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEE-----VEGLKETTICENGHCNSG-- 74

Query: 79  GFDIYDAGNNRKLLTATSP-IPSSST---RNNDEEANKKGKPMSSNKEEPS-VKKKNNLE 138
                   NNRKL+T T+P IPSS T   RNN+    K   P SSNKEE S VKKK+NLE
Sbjct: 75  --------NNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLE 134

Query: 139 NSEADQ------LDLVDIAEMDYSPAKRKPPIHN 161
           NSEA        LDL+DIAEMDYSPAKRKPPIHN
Sbjct: 135 NSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Lsi06G010620 vs. NCBI nr
Match: gi|225463045|ref|XP_002267969.1| (PREDICTED: uncharacterized protein LOC100249959 [Vitis vinifera])

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-08
Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 1


Query: 19  IIVIFSFFLVCCEGVRLGNGMIKLVGQLEKTLEEESPLIVEG----FKKITLCENGHCNS 78
           ++++ S  L   +G+RL  G     G  +  +EE SP+ +        ++TLC +GHC+S
Sbjct: 9   LLLLLSLILSQVQGIRLDKGFSS-AGHQKIQVEEGSPIKITSNGGLVGEVTLCRDGHCSS 68

Query: 79  GMLGFDIYDAGNNRKLLTATSPIPSSSTRNNDEEANKKGKPMSSNKEEPSVKKKNNLEN- 138
           G+          NRKL+T T+   S++   N +     GK   S  + P  +++N   N 
Sbjct: 69  GI----------NRKLMTKTTSTSSTTPTTNSKNVKNGGK---SGDQVPGREEENFYVNA 128

Query: 139 ---SEADQL------DLVDIAEMDYSPAKRKPPIHN 161
              SE  +       D++DIA MDYSPA+RKPPIHN
Sbjct: 129 SPVSEHPEAAPEGYPDIIDIAGMDYSPARRKPPIHN 150

[Close]

BLAST of Lsi06G010620 vs. NCBI nr
Match: gi|255583500|ref|XP_002532508.1| (PREDICTED: uncharacterized protein LOC8275713 [Ricinus communis])

HSP 1 Score: 65.9 bits (159), Expect = 7.6e-08
Identity = 55/147 (37.41%), Postives = 71/147 (48.30%), Query Frame = 1


Query: 31  EGVRLGNGMIKLVGQLEKTLEEESPLI---VEGFKKITLCENGHCNSGMLGFDIYDAGNN 90
           +G+RL  G +++  Q     EE+S LI     G  ++ +C+ GHC            G N
Sbjct: 21  KGIRLEKGFMQVEHQKLHDKEEKSSLINRSTGGIGEVIICKEGHCT-----------GMN 80

Query: 91  RKLLT----ATSPIPSSSTRNNDEEANKKGKPM----SSN------KEEPSVKKKNNLEN 150
           RKL T    ATS   +S+T  N E    K  PM    SSN       E+ ++    N E+
Sbjct: 81  RKLTTVITSATSTSTTSTTSKNKENGGTKANPMTKGISSNGEVGEEHEKFTINSSPNSEH 140

Query: 151 SEADQLDLVDIAEMDYSPAKRKPPIHN 161
            E      VDI  MDYSPAKRKPPIHN
Sbjct: 141 QEVTHDSFVDI--MDYSPAKRKPPIHN 154

[Close]

BLAST of Lsi06G010620 vs. NCBI nr
Match: gi|823227410|ref|XP_012446531.1| (PREDICTED: uncharacterized protein LOC105770044 [Gossypium raimondii])

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07
Identity = 55/161 (34.16%), Postives = 78/161 (48.45%), Query Frame = 1


Query: 14  CINGTIIVIFSFFLVCCEGVRLGNGMIKLVGQLEKTLEEESPLIVEGFK-KITLCENGHC 73
           C+     ++   FL   EG+RL  G  K  G   K  EE    I  G    +  C+ G C
Sbjct: 5   CLEAVCFLVLFIFLYSVEGIRL-EGSFKSSGHDVKLHEEALMKISNGVMGDVIFCKQGQC 64

Query: 74  NSGMLGFDIYDAGNNRKLLTATSPIP----SSSTRNNDEEANKKGKPM----SSNKEEPS 133
                       GN+RKLLTAT+       S+S+++ D    KK  P     S N+E   
Sbjct: 65  R-----------GNSRKLLTATTTATTTASSTSSKSEDGGDYKKANPTTRVKSGNQENGE 124

Query: 134 VKKKNNLENSEADQ-----LDLVDIAEMDYSPAKRKPPIHN 161
            ++K ++ +  + +      D+++IAEMDYSPAKRKPPIHN
Sbjct: 125 KQEKVSVSSPTSSEQQDQYADIMEIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Lsi06G010620 vs. NCBI nr
Match: gi|147822283|emb|CAN72908.1| (hypothetical protein VITISV_018845 [Vitis vinifera])

HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07
Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 1


Query: 19  IIVIFSFFLVCCEGVRLGNGMIKLVGQLEKTLEEESPLIVEG----FKKITLCENGHCNS 78
           ++++ S  L   +G+RL  G     G  +  ++E SP+ +        ++TLC +GHC+S
Sbjct: 10  LLLLLSLILSQVQGIRLEKGFSS-AGHQKIQVKEGSPIKITSNGGLVGEVTLCRDGHCSS 69

Query: 79  GMLGFDIYDAGNNRKLLTATSPIPSSSTRNNDEEANKKGKPMSSNKEEPSVKKKNNLEN- 138
           G+          NRKL+T T+   S++   N +     GK   S  + P  +++N   N 
Sbjct: 70  GI----------NRKLMTKTTSTSSTTPTTNSKNVKNGGK---SGDQVPGREEENFYVNA 129

Query: 139 ---SEADQL------DLVDIAEMDYSPAKRKPPIHN 161
              SE  +       D++DIA MDYSPA+RKPPIHN
Sbjct: 130 SPVSEHPEAAPEGYPDIIDIAGMDYSPARRKPPIHN 151

The following BLAST results are available for this feature:

BLAST of Lsi06G010620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G010620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYZ1_CUCSA	3.7e-30	59.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264570 PE=4 SV=1	[more]
D7T500_VITVI	3.1e-08	33.33	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00650 PE=4 SV=...	[more]
B9T2N9_RICCO	5.3e-08	37.41	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0510210 PE=4 SV=1	[more]
A0A0D2THB0_GOSRA	9.0e-08	34.16	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G013100 PE=4 SV=1	[more]
A5C0C6_VITVI	1.2e-07	32.69	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018845 PE=4 SV=1	[more]

BLAST of Lsi06G010620 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi06G010620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458005\|ref\|XP_004146738.1\|	5.4e-30	59.74	PREDICTED: uncharacterized protein LOC101204556 [Cucumis sativus]	[more]
gi\|225463045\|ref\|XP_002267969.1\|	4.4e-08	33.33	PREDICTED: uncharacterized protein LOC100249959 [Vitis vinifera]	[more]
gi\|255583500\|ref\|XP_002532508.1\|	7.6e-08	37.41	PREDICTED: uncharacterized protein LOC8275713 [Ricinus communis]	[more]
gi\|823227410\|ref\|XP_012446531.1\|	1.3e-07	34.16	PREDICTED: uncharacterized protein LOC105770044 [Gossypium raimondii]	[more]
gi\|147822283\|emb\|CAN72908.1\|	1.7e-07	32.69	hypothetical protein VITISV_018845 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008283	cell proliferation
biological_process	GO:0040007	growth
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008083	growth factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G010620.1	Lsi06G010620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33743	FAMILY NOT NAMED	coord: 65..160 score: 3.8
None	No IPR available	PANTHER	PTHR33743:SF5	SUBFAMILY NOT NAMED	coord: 65..160 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G010620	Csa1G264570	Cucumber (Chinese Long) v2	culsiB073
Lsi06G010620	CSPI01G17190	Wild cucumber (PI 183967)	cpilsiB073
Lsi06G010620	CmaCh11G005020	Cucurbita maxima (Rimu)	cmalsiB132
Lsi06G010620	CmoCh11G004960	Cucurbita moschata (Rifu)	cmolsiB120
Lsi06G010620	ClCG06G011960	Watermelon (Charleston Gray)	lsiwcgB378
Lsi06G010620	Cla97C06G121130	Watermelon (97103) v2	lsiwmbB379
Lsi06G010620	BhiUN297G13	Wax gourd	lsiwgoB481
Lsi06G010620	CsGy1G017400	Cucumber (Gy14) v2	cgyblsiB070
Lsi06G010620	Carg27187	Silver-seed gourd	carlsiB521
Lsi06G010620	CsaV3_1G028420	Cucumber (Chinese Long) v3	cuclsiB084

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G010620	Bottle gourd (USVL1VR-Ls)	lsilsiB057
Lsi06G010620	Cucumber (Gy14) v1	cgylsiB210
Lsi06G010620	Cucumber (Gy14) v1	cgylsiB564
Lsi06G010620	Cucurbita maxima (Rimu)	cmalsiB065
Lsi06G010620	Cucurbita maxima (Rimu)	cmalsiB183
Lsi06G010620	Cucurbita moschata (Rifu)	cmolsiB052
Lsi06G010620	Cucurbita moschata (Rifu)	cmolsiB173
Lsi06G010620	Cucurbita moschata (Rifu)	cmolsiB726
Lsi06G010620	Cucurbita pepo (Zucchini)	cpelsiB308
Lsi06G010620	Cucurbita pepo (Zucchini)	cpelsiB565
Lsi06G010620	Wild cucumber (PI 183967)	cpilsiB064
Lsi06G010620	Wild cucumber (PI 183967)	cpilsiB132
Lsi06G010620	Cucumber (Chinese Long) v2	culsiB066
Lsi06G010620	Cucumber (Chinese Long) v2	culsiB133
Lsi06G010620	Melon (DHL92) v3.5.1	lsimeB399
Lsi06G010620	Melon (DHL92) v3.5.1	lsimeB404
Lsi06G010620	Melon (DHL92) v3.5.1	lsimeB420
Lsi06G010620	Watermelon (97103) v1	lsiwmB420
Lsi06G010620	Cucumber (Gy14) v2	cgyblsiB060
Lsi06G010620	Cucumber (Gy14) v2	cgyblsiB122
Lsi06G010620	Melon (DHL92) v3.6.1	lsimedB421
Lsi06G010620	Melon (DHL92) v3.6.1	lsimedB426
Lsi06G010620	Melon (DHL92) v3.6.1	lsimedB442
Lsi06G010620	Silver-seed gourd	carlsiB118
Lsi06G010620	Silver-seed gourd	carlsiB229
Lsi06G010620	Cucumber (Chinese Long) v3	cuclsiB074
Lsi06G010620	Cucumber (Chinese Long) v3	cuclsiB144
Lsi06G010620	Wax gourd	lsiwgoB506