CsGy1G017400 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTGCTAAGCCATCAAGCATTCACAATTTCCCCATATTTCTCCTTCAAATAATCTTCTTATAAAAGTACTTTCAAATAATTCTAATAATAATAACTTTAAAAATCCCTTATTTATATCTTCCATTTCTGACCACCTTAAGGATTCCAAAAACTGTCTTACTTTTTCGTATCCTTAGTTTTTCTTTCTTCTCTTTGATCTCCTCTTATAAACATTATAAAGTCCTTTTATCCAAAAAATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCCTGGTCTTCTTCTTCTTATCTAATGAAGCTCAAGGTATGCACAACTTTTTCCCATTTCTGTTAGATGGGTTTTGTTTATTTTGCTGTTCAATTTTTATTATGCATTAATGGAATTATAATGATTGTGAGTTGTTTCTTCTATTTTGTGAAAGGTATTCGCTTGGGAAATGGGATCATCATCAAGCTTGTTGGCCAACTAGAAAAAACCCTAGTGAGTTTTCTTCCAATCCCAGTGGATTTCATTTTTTTTTTATAGAATTATTTGAATTCATTCTCCAATTCTAAAAATAAAATCAATATTTTTTTATTTTCAAATTTTGAATGAACTTTCCTAATAGAAAATAATCCGTCTCTATAAGCTTAATTTTCAAGGAAAAAAGGTTTATAACTCAACATTTTGAGTTTTTTTTTTTTTTCTAATTTGTTTATTTGGTCAAAATCCTTAATATTGATATTGCAGGAAGAAGTAGAAGGTTTGAAGGAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGTATGCTATTTAGTGAAATAGTGCAATTTAAATCTTCCTTGGTGACTTTTTCTTTTCTTTTCAAAAAGTCAACTTATAAATTATAATATCTATTTTTCCTTTATGTTTTTATACTTGAAACCCAAAATTTGCCAACTGAAAAAGTAGTTCTTCCAAAACAAAAAATAAAAAAGAATTTTGTTAAAAAAAAGAGGAAAATGTGGACTTAAAAGGTGAGAGATATCTATATCAAACAGAGTTATATATACTTTTTTATGCATTAAATTGTGCAATAAAAATGTTGATAAAATATCATTAAAAAGGCAACCCAAATGGGACATACTATTTCATAAATTTATTATTGTGTGTGTGTATATATATCCACATCTGAAGTGTGGGTTTGACATTATTTGATATTTATGATATATTTTGCAGGAAACAATAGAAAACTTATGACTGTGACTGCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGGTTAGTCATCCATCACTTCAATCTTATTTATTTTTAAAAACATTCACGAGTGAGCATTTACTAATTAAAATTAATTCTTTTTAACAATTTTAAAAATTCTTACTTGTATTTTGTCACTATTTTTATCATCCTTCCCACCTCAACATTTGAATAATAATGGATAAAGCTAAATTATATTTCTATTTAGACTCAGTTTACGAGTTTATTTCCTCTTAGTAGTTTTTCATCTATATAAAATTTTGAAAATTTTGCCAATTTTTCAAAACAAAAAATTGTTTTTTTAGTTTTCAAAATTAGGTTTAATTTTTTCCATCACACTTGATCTTCTAAACTAAAAAACAATAGTCAAATAGTGTAAGAAGATCTTTTTAAGGGAGTGGTTTTTATAAACTTAAAAAGTTCAAATATTTCTATTATATTTCACTGTGTCTCCAGTAGTATTGATCAATTACTATAAACCCAAGAAAGTTTAATCAACATTGAATTAATTAATTAATGGTTTATTGTGTTCTTGGTACAGAATAATGAAGGAAACTACAAAAAGAGGATCAGCCCCAAGTCATCAAATATAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCTCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAATCCCAAAATTTAAAAAGGGTTAAAACAACAACCAAACAATAAAGTTTATATTTAAACAAAAAAAGTCTATATATTCAACAAAAAGGGTAGAAAAAAAGAGATATATAATTTGGCATATAAAAGACAGCCTTACACAAATGCTGCAGGTATTTTAGGGTTTAGCTTAGGGAAACTGTCCTTTTGTACAAAGCATTATTATTAAAATGCTATGTTATATATTAATATTAATTATTATTATCGGTGTTATCAACTTATCATTGCTTGTGATTGGATTTCTTTTTTTCTTTTTTG CAATTGCTAAGCCATCAAGCATTCACAATTTCCCCATATTTCTCCTTCAAATAATCTTCTTATAAAAGTACTTTCAAATAATTCTAATAATAATAACTTTAAAAATCCCTTATTTATATCTTCCATTTCTGACCACCTTAAGGATTCCAAAAACTGTCTTACTTTTTCGTATCCTTAGTTTTTCTTTCTTCTCTTTGATCTCCTCTTATAAACATTATAAAGTCCTTTTATCCAAAAAATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCCTGGTCTTCTTCTTCTTATCTAATGAAGCTCAAGGTATTCGCTTGGGAAATGGGATCATCATCAAGCTTGTTGGCCAACTAGAAAAAACCCTAGAAGAAGTAGAAGGTTTGAAGGAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGAAACAATAGAAAACTTATGACTGTGACTGCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGAATAATGAAGGAAACTACAAAAAGAGGATCAGCCCCAAGTCATCAAATATAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCTCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAATCCCAAAATTTAAAAAGGGTTAAAACAACAACCAAACAATAAAGTTTATATTTAAACAAAAAAAGTCTATATATTCAACAAAAAGGGTAGAAAAAAAGAGATATATAATTTGGCATATAAAAGACAGCCTTACACAAATGCTGCAGGTATTTTAGGGTTTAGCTTAGGGAAACTGTCCTTTTGTACAAAGCATTATTATTAAAATGCTATGTTATATATTAATATTAATTATTATTATCGGTGTTATCAACTTATCATTGCTTGTGATTGGATTTCTTTTTTTCTTTTTTG ATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCCTGGTCTTCTTCTTCTTATCTAATGAAGCTCAAGGTATTCGCTTGGGAAATGGGATCATCATCAAGCTTGTTGGCCAACTAGAAAAAACCCTAGAAGAAGTAGAAGGTTTGAAGGAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGAAACAATAGAAAACTTATGACTGTGACTGCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGAATAATGAAGGAAACTACAAAAAGAGGATCAGCCCCAAGTCATCAAATATAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCTCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAA MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICENGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKRISPKSSNIEESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN
BLAST of CsGy1G017400 vs. NCBI nr
Match: XP_004146738.1 (PREDICTED: uncharacterized protein LOC101204556 [Cucumis sativus] >KGN65206.1 hypothetical protein Csa_1G264570 [Cucumis sativus]) HSP 1 Score: 264.2 bits (674), Expect = 2.7e-67 Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of CsGy1G017400 vs. NCBI nr
Match: XP_022135362.1 (uncharacterized protein LOC111007333 [Momordica charantia]) HSP 1 Score: 130.6 bits (327), Expect = 4.6e-27 Identity = 87/143 (60.84%), Postives = 97/143 (67.83%), Query Frame = 0
BLAST of CsGy1G017400 vs. NCBI nr
Match: XP_022135297.1 (uncharacterized protein LOC111007293 [Momordica charantia]) HSP 1 Score: 122.9 bits (307), Expect = 9.7e-25 Identity = 83/142 (58.45%), Postives = 94/142 (66.20%), Query Frame = 0
BLAST of CsGy1G017400 vs. NCBI nr
Match: XP_022159421.1 (uncharacterized protein LOC111025844 [Momordica charantia]) HSP 1 Score: 117.5 bits (293), Expect = 4.1e-23 Identity = 81/143 (56.64%), Postives = 95/143 (66.43%), Query Frame = 0
BLAST of CsGy1G017400 vs. NCBI nr
Match: XP_023001652.1 (uncharacterized protein LOC111495723 [Cucurbita maxima]) HSP 1 Score: 94.7 bits (234), Expect = 2.8e-16 Identity = 65/131 (49.62%), Postives = 81/131 (61.83%), Query Frame = 0
BLAST of CsGy1G017400 vs. TrEMBL
Match: tr|A0A0A0LYZ1|A0A0A0LYZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264570 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.8e-67 Identity = 151/153 (98.69%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of CsGy1G017400 vs. TrEMBL
Match: tr|A0A2P5SGU5|A0A2P5SGU5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04709 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of CsGy1G017400 vs. TrEMBL
Match: tr|A0A1Q3C0W0|A0A1Q3C0W0_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_17388 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.0e-06 Identity = 49/140 (35.00%), Postives = 70/140 (50.00%), Query Frame = 0
BLAST of CsGy1G017400 vs. TrEMBL
Match: tr|A0A2P5XPS5|A0A2P5XPS5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA15372 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.8e-06 Identity = 45/117 (38.46%), Postives = 65/117 (55.56%), Query Frame = 0
BLAST of CsGy1G017400 vs. TrEMBL
Match: tr|A0A2G5DQ43|A0A2G5DQ43_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01600084v1 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06 Identity = 51/149 (34.23%), Postives = 72/149 (48.32%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |