Csa1G264570 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G264570
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr1 : 12813218 .. 12815129 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCCTGGTCTTCTTCTTCTTATCTAATGAAGCTCAAGGTATGCACAACTTTTTCCCATTTCTGTTAGATGGGTTTTGTTTATTTTGCTGTTCAATTTTTATTATGCATTAATGGAATTATAATGATTGTGAGTTGTTTCTTCTATTTTGTGAAAGGTATTCGCTTGGGAAATGGGATCATCATCAAGCTTGTTGGCCAACTAGAAAAAACCCTAGTGAGTTTTCTTCCAATCCCAGTGGATTTCATTTGTTTTTATAGAATTATTTGAATTCATTCTCCAATTCTAAAAATAAAATCAATATTTTTTTTTTTCAAATTTTGAATGAACTTTCCTAATAGAAAATAATCCGTCTTTATAAGCTTAATTTTCAAGGAAAAAAGGTTTATAACTCAACATTTTGAGTTTTTTTTTTCTTTCTAATTTGTTTATTTGGTCAAAATCTTTAATATTGATATTGCAGGAAGAAGTAGAAGGTTTGAAGGAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGTATGCTATTTAGTGAAATAGTGCAATTTAAATCTTCCTTGGTGACTTTTTCTTTTCTTTTCAAAAAGTCAACTTATAAATTATAATATCTATTTTTCCTTTATGTTTTTATACTTGAAACCCAAAATTTGCCAACTGAAAAAGTAGTTCTTCCAAAACAAAAAACAAAAAAGAATTTTTGTTAAAAAAAAGAGGAAAATGTGGACTTAAAAGGTGAGAGATATCTATATCAAACAGAGTTATATATACTTTTTTATGCATTAAATTGTGCAATAAAAATGTTGATAAAATATCATTAAAAAGGCAACCCAAATGGGACATACTATTTCATAAATTTATTATTGTGTGTGTGTGTATATACATATCCACATCTGAAGTGTGGGTTTGACATTATTTGATATTTATGATATATTTTGCAGGAAACAATAGAAAACTTATGACTGTGACTGCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGGTTAGTCATCCATCACTTCAATCTTATTTATTTTTAAAAACATTCATGAGTGAGCATTTACTAATTAAAATTAATTCTTTTTTAACAATTTTAAAAATTCTTACTTGTATTTTGTCACTATTTTTATCATCCTTCCCACCTCAACATTTGAATAATGGATAAAGCTAAATTATATTTCTATTTAGACTCAGTTTACGAGTTTATTTCCTCTTAGTAGTTTTTCATCTATATAAAATTTTGAAAATTTTGCCAATTTTTCAAAACAAAAAATTGTTTTTTTTAGTTTTCAAAATTAGGTTTAATTTTTTCCATCACACTTGATCTTCTAAACTAAAAAACAATAGTCAAATAGTGTAAGAAGATCTTTTTAAGGGAGTGGTTTTTATAAACTTAAAAAGTTCAAATATTTCTATTATATTTCACTGTGTCTCCAATAGTATTGATCAATTACTATAAACCCAAGAAAGTTTAATCAACATTGAATTAATTAATTAATGGTTTATTGTGTTCTTGGTACAGAATAATGAAGGAAACTACAAAAAGGGGATCAGCCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCTCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAATCCCAAAATTTAAAAAAGGGTTAAAACAACAACCAAACAATAAAGTTTATATTTAAACAAAAAAAGTCTATATATTCAACAAAAAGGGTAGAAAAAAAGAGATATATAATTTGGCATATAAAAGACAGCCTTACACAAATGCTGCAG

mRNA sequence

ATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCCTGGTCTTCTTCTTCTTATCTAATGAAGCTCAAGGTATTCGCTTGGGAAATGGGATCATCATCAAGCTTGTTGGCCAACTAGAAAAAACCCTAGAAGAAGTAGAAGGTTTGAAGGAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGAAACAATAGAAAACTTATGACTGTGACTGCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGAATAATGAAGGAAACTACAAAAAGGGGATCAGCCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCTCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAA

Coding sequence (CDS)

ATGAGCTCCAATAATTATGCTCTACCTTCTCTTCTTCTCCTCCTCCTCCTGGTCTTCTTCTTCTTATCTAATGAAGCTCAAGGTATTCGCTTGGGAAATGGGATCATCATCAAGCTTGTTGGCCAACTAGAAAAAACCCTAGAAGAAGTAGAAGGTTTGAAGGAAACTACTATTTGTGAGAATGGGCATTGCAATTCAGGAAACAATAGAAAACTTATGACTGTGACTGCACCACCAATACCATCATCTCCAACTCCTTCTATAAGGAATAATGAAGGAAACTACAAAAAGGGGATCAGCCCCAAGTCATCAAATAAAGAAGAATCATCAAGTGTGAAAAAGAAGGATAATTTGGAGAATTCAGAGGCAGTTTCTAAAAATCTTGAGGCAGCTCTTGACCTTATAGACATTGCAGAAATGGACTATTCTCCAGCAAAACGAAAGCCTCCAATACATAACTAA

Protein sequence

MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICENGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN*

Homology

[Close]

BLAST of Csa1G264570 vs. TrEMBL
Match: A0A0A0LYZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264570 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1


Query: 1   MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICE 60
           MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICE
Sbjct: 1   MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICE 60

Query: 61  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 120
           NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN
Sbjct: 61  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 120

Query: 121 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
           SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN
Sbjct: 121 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Csa1G264570 vs. TrEMBL
Match: D7T500_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00650 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.1e-15
Identity = 60/153 (39.22%), Postives = 81/153 (52.94%), Query Frame = 1


Query: 10  SLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLK---------ETTICE 69
           SL + LLL+   + ++ QGIRL  G      G  +  +EE   +K         E T+C 
Sbjct: 4   SLSICLLLLLSLILSQVQGIRLDKGF--SSAGHQKIQVEEGSPIKITSNGGLVGEVTLCR 63

Query: 70  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 129
           +GHC+SG NRKLMT T     ++PT + +N +   K G       +EE+  V      E+
Sbjct: 64  DGHCSSGINRKLMTKTTSTSSTTPTTNSKNVKNGGKSG-DQVPGREEENFYVNASPVSEH 123

Query: 130 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
            EA     E   D+IDIA MDYSPA+RKPPIHN
Sbjct: 124 PEAAP---EGYPDIIDIAGMDYSPARRKPPIHN 150

[Close]

BLAST of Csa1G264570 vs. TrEMBL
Match: A5C0C6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018845 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.3e-15
Identity = 62/153 (40.52%), Postives = 82/153 (53.59%), Query Frame = 1


Query: 10  SLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLK---------ETTICE 69
           S+ LLLLL+   LS + QGIRL  G      G  +  ++E   +K         E T+C 
Sbjct: 6   SICLLLLLLSLILS-QVQGIRLEKGF--SSAGHQKIQVKEGSPIKITSNGGLVGEVTLCR 65

Query: 70  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 129
           +GHC+SG NRKLMT T     ++PT + +N +   K G       +EE+  V      E+
Sbjct: 66  DGHCSSGINRKLMTKTTSTSSTTPTTNSKNVKNGGKSG-DQVPGREEENFYVNASPVSEH 125

Query: 130 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
            EA     E   D+IDIA MDYSPA+RKPPIHN
Sbjct: 126 PEAAP---EGYPDIIDIAGMDYSPARRKPPIHN 151

[Close]

BLAST of Csa1G264570 vs. TrEMBL
Match: W9RIF5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009946 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.1e-14
Identity = 61/168 (36.31%), Postives = 88/168 (52.38%), Query Frame = 1


Query: 9   PSLLLLLLLVFFFLSNEAQGIRLGNGIIIKL-------VGQLEKTLEEVEGL---KETTI 68
           P   + LLL+   LS + QGIRL  G  + +       + + E TL +   +   +E  +
Sbjct: 3   PFFTVSLLLLSLLLSEQVQGIRLEKGYYMSVEQHKSIHILEKENTLTKTNNIGVTQEAVV 62

Query: 69  CENGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNK------------ 128
           C++G+C SGNNRKL++VT    PS+ T +   NE N K   +P S+ +            
Sbjct: 63  CKDGNC-SGNNRKLLSVT----PSTTTTTTAKNEKNGKTKANPISNGEKGTNRSQNYGHG 122

Query: 129 -EESSSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
            EE SS    ++L  SE   +      D+ID+AEMDYSPA+RK PIHN
Sbjct: 123 EEEKSSSSTVNSLSTSEEHPEYAHYP-DVIDLAEMDYSPARRKTPIHN 164

[Close]

BLAST of Csa1G264570 vs. TrEMBL
Match: A0A061GQ53_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_038242 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-13
Identity = 59/151 (39.07%), Postives = 80/151 (52.98%), Query Frame = 1


Query: 11  LLLLLLLVFFFLSNEAQGIRLGNGIII----KL-VGQLEKTLEEVEGLKETTICENGHCN 70
           L + LLL+  FLS+  QGIRL          KL  G + KT  EV G  E  +C+ GHC+
Sbjct: 6   LAVSLLLLCIFLSS-VQGIRLEKSFKSARHPKLHEGTVMKTSNEVMG--EVILCKEGHCS 65

Query: 71  SGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLENSEAVS 130
           +G +RKL +      P+S T S     G  K   + K  +  E +  K++     S   S
Sbjct: 66  AGKSRKLSSAMTSSAPTSTTTSKSEENGENKGNPTSKVKSGNEENGEKQEKFPVGSPTSS 125

Query: 131 KNLEAA---LDLIDIAEMDYSPAKRKPPIHN 154
           ++ E      D++DIAEMDYSPA+RKPPIHN
Sbjct: 126 EHQEVHDQYADIMDIAEMDYSPARRKPPIHN 153

[Close]

BLAST of Csa1G264570 vs. NCBI nr
Match: gi|449458005|ref|XP_004146738.1| (PREDICTED: uncharacterized protein LOC101204556 [Cucumis sativus])

HSP 1 Score: 303.5 bits (776), Expect = 2.1e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1


Query: 1   MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICE 60
           MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICE
Sbjct: 1   MSSNNYALPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLKETTICE 60

Query: 61  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 120
           NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN
Sbjct: 61  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 120

Query: 121 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
           SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN
Sbjct: 121 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 153

[Close]

BLAST of Csa1G264570 vs. NCBI nr
Match: gi|225463045|ref|XP_002267969.1| (PREDICTED: uncharacterized protein LOC100249959 [Vitis vinifera])

HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15
Identity = 60/153 (39.22%), Postives = 81/153 (52.94%), Query Frame = 1


Query: 10  SLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLK---------ETTICE 69
           SL + LLL+   + ++ QGIRL  G      G  +  +EE   +K         E T+C 
Sbjct: 4   SLSICLLLLLSLILSQVQGIRLDKGF--SSAGHQKIQVEEGSPIKITSNGGLVGEVTLCR 63

Query: 70  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 129
           +GHC+SG NRKLMT T     ++PT + +N +   K G       +EE+  V      E+
Sbjct: 64  DGHCSSGINRKLMTKTTSTSSTTPTTNSKNVKNGGKSG-DQVPGREEENFYVNASPVSEH 123

Query: 130 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
            EA     E   D+IDIA MDYSPA+RKPPIHN
Sbjct: 124 PEAAP---EGYPDIIDIAGMDYSPARRKPPIHN 150

[Close]

BLAST of Csa1G264570 vs. NCBI nr
Match: gi|147822283|emb|CAN72908.1| (hypothetical protein VITISV_018845 [Vitis vinifera])

HSP 1 Score: 89.7 bits (221), Expect = 4.7e-15
Identity = 62/153 (40.52%), Postives = 82/153 (53.59%), Query Frame = 1


Query: 10  SLLLLLLLVFFFLSNEAQGIRLGNGIIIKLVGQLEKTLEEVEGLK---------ETTICE 69
           S+ LLLLL+   LS + QGIRL  G      G  +  ++E   +K         E T+C 
Sbjct: 6   SICLLLLLLSLILS-QVQGIRLEKGF--SSAGHQKIQVKEGSPIKITSNGGLVGEVTLCR 65

Query: 70  NGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNKEESSSVKKKDNLEN 129
           +GHC+SG NRKLMT T     ++PT + +N +   K G       +EE+  V      E+
Sbjct: 66  DGHCSSGINRKLMTKTTSTSSTTPTTNSKNVKNGGKSG-DQVPGREEENFYVNASPVSEH 125

Query: 130 SEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
            EA     E   D+IDIA MDYSPA+RKPPIHN
Sbjct: 126 PEAAP---EGYPDIIDIAGMDYSPARRKPPIHN 151

[Close]

BLAST of Csa1G264570 vs. NCBI nr
Match: gi|1009110043|ref|XP_015893407.1| (PREDICTED: uncharacterized protein LOC107427535 [Ziziphus jujuba])

HSP 1 Score: 87.8 bits (216), Expect = 1.8e-14
Identity = 64/163 (39.26%), Postives = 85/163 (52.15%), Query Frame = 1


Query: 9   PSLLLLLLLVFFFLSNEAQGIRLGNGI-IIKLVGQLEKTLEEVE---------GLKETTI 68
           PSL+L LLL+   LS + QGIRL        + GQ     EE           G+ E T+
Sbjct: 3   PSLILSLLLLSLLLS-DVQGIRLDKAFKSAGIAGQNRIQKEETGSAKRNTNGGGIGEDTV 62

Query: 69  CENGHCNSGNNRKLMTVTAPPIPSSPTPSIRNNEGNYKKGISPKSSNK--------EESS 128
           C++G C SGNNRKL++VT    PS+ T +    E N      P S+ +        EE+ 
Sbjct: 63  CKDGEC-SGNNRKLISVT----PSTTTTTSSKREKNGTNKAEPISNEQKGNRQRVEEENF 122

Query: 129 SVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
           +VK  +   + E      E   D++DIAEMDYSPA+RKPPIHN
Sbjct: 123 TVKSSEATSDDEHREGPYEQYPDIVDIAEMDYSPARRKPPIHN 159

[Close]

BLAST of Csa1G264570 vs. NCBI nr
Match: gi|697105924|ref|XP_009606792.1| (PREDICTED: uncharacterized protein LOC104101086 isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 86.3 bits (212), Expect = 5.2e-14
Identity = 68/164 (41.46%), Postives = 88/164 (53.66%), Query Frame = 1


Query: 8   LPSLLLLLLLVFFFLSNEAQGIRLGNGIIIKL---VGQLEKTLEEVE--GLKETTICENG 67
           +  +LLLLLL+   L  E QG  L  G +      + Q E  L+E    G  E  +C++G
Sbjct: 1   MKQVLLLLLLLSSTLVYEVQGRHLKKGNLSSSKNPILQQENVLKERSEGGTGEVILCKDG 60

Query: 68  HCNS-GNNRKLMTVTAPPIPSSPTPS----IRNNEGN-----YKKGISPKS---SNKEES 127
           HC+S G NRKLMT T     SSPT +    I+NNEGN       KG S        KEE+
Sbjct: 61  HCSSSGRNRKLMTKTTST--SSPTTTSTKNIKNNEGNKGDHTVLKGQSSSERVIGGKEEN 120

Query: 128 SSVKKKDNLENSEAVSKNLEAALDLIDIAEMDYSPAKRKPPIHN 154
           SSV       + +  S++     D++D+A MDYSPAKRKPPIHN
Sbjct: 121 SSVNSSPETGHWKTSSEHYP---DVLDLAGMDYSPAKRKPPIHN 159

The following BLAST results are available for this feature:

BLAST of Csa1G264570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYZ1_CUCSA	1.4e-79	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264570 PE=4 SV=1	[more]
D7T500_VITVI	1.1e-15	39.22	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00650 PE=4 SV=...	[more]
A5C0C6_VITVI	3.3e-15	40.52	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018845 PE=4 SV=1	[more]
W9RIF5_9ROSA	8.1e-14	36.31	Uncharacterized protein OS=Morus notabilis GN=L484_009946 PE=4 SV=1	[more]
A0A061GQ53_THECC	3.1e-13	39.07	Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_038242 PE=4 SV=1	[more]

BLAST of Csa1G264570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458005\|ref\|XP_004146738.1\|	2.1e-79	100.00	PREDICTED: uncharacterized protein LOC101204556 [Cucumis sativus]	[more]
gi\|225463045\|ref\|XP_002267969.1\|	1.6e-15	39.22	PREDICTED: uncharacterized protein LOC100249959 [Vitis vinifera]	[more]
gi\|147822283\|emb\|CAN72908.1\|	4.7e-15	40.52	hypothetical protein VITISV_018845 [Vitis vinifera]	[more]
gi\|1009110043\|ref\|XP_015893407.1\|	1.8e-14	39.26	PREDICTED: uncharacterized protein LOC107427535 [Ziziphus jujuba]	[more]
gi\|697105924\|ref\|XP_009606792.1\|	5.2e-14	41.46	PREDICTED: uncharacterized protein LOC104101086 isoform X1 [Nicotiana tomentosif...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008283	cell proliferation
biological_process	GO:0040007	growth
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008083	growth factor activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU132631	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G264570.1	Csa1G264570.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU132631	CU132631	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 36..56 scor
None	No IPR available	PANTHER	PTHR33743	FAMILY NOT NAMED	coord: 1..106 score: 7.4E-29coord: 125..153 score: 7.4
None	No IPR available	PANTHER	PTHR33743:SF5	SUBFAMILY NOT NAMED	coord: 1..106 score: 7.4E-29coord: 125..153 score: 7.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G264570	ClCG06G011960	Watermelon (Charleston Gray)	cuwcgB067
Csa1G264570	Lsi06G010620	Bottle gourd (USVL1VR-Ls)	culsiB073
Csa1G264570	Cla97C06G121130	Watermelon (97103) v2	cuwmbB066
Csa1G264570	BhiUN297G13	Wax gourd	cuwgoB011
Csa1G264570	CSPI01G17190	Wild cucumber (PI 183967)	cpicuB002
Csa1G264570	CmaCh11G005020	Cucurbita maxima (Rimu)	cmacuB100
Csa1G264570	CmoCh11G004960	Cucurbita moschata (Rifu)	cmocuB088
Csa1G264570	CsGy1G017400	Cucumber (Gy14) v2	cgybcuB003
Csa1G264570	Carg27187	Silver-seed gourd	carcuB0602

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G264570	Silver-seed gourd	carcuB0133
Csa1G264570	Silver-seed gourd	carcuB0281
Csa1G264570	Silver-seed gourd	carcuB1086
Csa1G264570	Wax gourd	cuwgoB099
Csa1G264570	Cucumber (Chinese Long) v2	cucuB009
Csa1G264570	Cucumber (Chinese Long) v2	cucuB011
Csa1G264570	Cucumber (Gy14) v1	cgycuB095
Csa1G264570	Cucumber (Gy14) v1	cgycuB183
Csa1G264570	Cucumber (Gy14) v1	cgycuB491
Csa1G264570	Cucurbita maxima (Rimu)	cmacuB060
Csa1G264570	Cucurbita maxima (Rimu)	cmacuB162
Csa1G264570	Cucurbita maxima (Rimu)	cmacuB780
Csa1G264570	Cucurbita moschata (Rifu)	cmocuB048
Csa1G264570	Cucurbita moschata (Rifu)	cmocuB147
Csa1G264570	Cucurbita moschata (Rifu)	cmocuB773
Csa1G264570	Melon (DHL92) v3.5.1	cumeB057
Csa1G264570	Melon (DHL92) v3.5.1	cumeB073
Csa1G264570	Watermelon (97103) v1	cuwmB080
Csa1G264570	Cucurbita pepo (Zucchini)	cpecuB093
Csa1G264570	Cucurbita pepo (Zucchini)	cpecuB350
Csa1G264570	Cucurbita pepo (Zucchini)	cpecuB636
Csa1G264570	Bottle gourd (USVL1VR-Ls)	culsiB011
Csa1G264570	Bottle gourd (USVL1VR-Ls)	culsiB014
Csa1G264570	Cucumber (Gy14) v2	cgybcuB054
Csa1G264570	Melon (DHL92) v3.6.1	cumedB049
Csa1G264570	Melon (DHL92) v3.6.1	cumedB066