Lsi06G006590 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G006590
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionThioredoxin
Locationchr06 : 10008043 .. 10011185 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCTCCCGCAGCTTCAGTTCACCTTCTCCTCCGTCATTTCTGAGCCTTTTTGCAATCTCTCTCTATCTCTCTTTCTCTCTCTTCCATGGCTTTGCATCTCTCTCTCTCTCCGCCTTCGATCAGATCGTCGCCGTCGTTTCCCTGCAGCGGAAGGCAGCTGATCGCCGCACTTTCTGAGTCGAAAAGTGGCTGCTTCAATTCGAAGAGCTTGAGTGTCACTAGTAGCAGGAACATTGGTGTTTCCGGTGGAAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGACACTTTCTGGCCCATTGTCAATGCCGCCGGTGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTTTGTGTTTCTCTGTCTCCATATGTCTTTGCTTCTTAATTTTGTGGTTTCTTTAGGTTACTACATGAGATTATTCTGAAATATGGCTGCGGATATGAATGTTCTTATATTTGTAGGTTATTTCTGGTTTACCGATTTAATTACGGAAACCTAGTCGAGCTAGGCGATGCTTAGAGTAGAGTATAGATCTCGTGGTTCGAGTAATTGAAAAGAAACTTCGGTTTTAATTAGGCGTCTGTTTGTCAAATGATTTTGAAATTTATAAATGTAAGCCCTGCAAGTTGAGGACACTTTGTATTTTTTTAATATTGAGTTTGACTTTGATTAAAAAATTATCAGAGGAAGACAGTTGTTTTCTTTTTCTTCTTTTAAACAACATTTAGGACTTGAAAACTGGGTTTAGTTTTGATGTATAGCATTTTGAATTCACATCTCGGCTGGACTAACTCAAGCTTAATAGCTGTAATTTCTGAGACGATGTCAGGAGAAATTGTTGGAGGATGCCAGAACTATGTGGCTCTCACATTGAATAATTTTTCTAATATTGTAGTTTTCGAAACAATATACAGTTGAAACATCTTCTAAATAAGTTCAAGGCAATTTGATAATGGGTATTCTAGCCACTGGGTAGTCAAATTATTTTTTTACAAAGTATTTGGAATCAAATCCATTAGATGTAGAGCTCGTTGAATAATTTTTCCAACAACTGAGGGTGGGGGATTAAAACCTATGGTCTCTTCATCCATGGCATATGCTGTTGAGTTATGCTTAAGGTTGACAAGTCTAAGTCATATCAAACAACATTTGTAGTCTATACAAGCTACGTGATTGCTTGTTTCGTTTCCAATAATTTTGACATAATTTTAATGTAATGTTCTCTGTTTTAGGGTATTTTGCTCCATCGCGCTGTAGCCAATTGGTGATGGTGCCTTTTTAATAGTGATTAAGCCTGAAGTATTTTATTAATGTGCAGAGTTTTAGGAAAGAAAATTTGAAAGAATGAGAAACTGGTTAGCTAGAAAAACAACACAATAGCTTGTTTATACTAAATATAACATATCTTACCAAGAAAAAAAAAAAAACTAGATATAACATAAGTAAAAGAAGAAAAATATATTGATTTAAAACAAGCTTCATACCACGACTTGGATAAACTTTTGAAGCGTATAATGTAACATAGCGTAACTGAAATGTGCTTTGCCTCTATGTTATGACCTTTCGGATCTTTCTTTTCTTTCCTTTAGCTTTAATTCCATAATACATAAGTTTATTAACTAAAAACAAAGACACCCTTTGCCTTTGACAGCCTTAAGTTTCTGGCAGAGTTTTTACTTTTGCCTTATTTTTTCTTGTAATAACCCGATTCTCATGACTGTGGTGATTAATTTTTGTTAGAAAGAAACTTTTCCTTGTTTGCTGTGCAATTTCAGACTCCTTGCGACATTAATCATTTGTGAAAATTTTAGATTCATTATTTATTGTCTCTGTTTTTGGACTCCCAAGCTTAATATCTTAATTATCTTTCTTTCTTTATTCATCCTTACATGGTACACTAAAGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTCGACTGCAACCAAGACAATAAGGTTCGTTTCATGATCCCTACTTTCTTGCTGGAGCTTAGGAATGTATTTGCATAGTTCATATAAGAACACTTGAATTCTCTTTATTTGGCAGCCATTGGCAAAGGAACTTGGGATAAAAGTTGTGCCAACTTTCAAAATTCTAAAGGATAACAAGGTTGTTAAAGAAGTAACTGGGGCAAAGTTTGATGATTTGGTTCATGCCATTGATACTGTAAGATCCAGCTGAAAACTCTCCTGTCTTCTCTTCTTTGTAAATTCAAATAATATGATGCAAGGAAGAGTATCCAGGACAGTTATTTATTTTACTCTATTTATTTAATAATTTTGTGTACTGTTAAGTTTTAAGGAAGAAGCTGTTCAACAATATTCTTCTTCTTGCTAAGATAGTGGGAAATGATTCTGTATATAGTTGTTTGGGACATAGACATTTGAATATGGACAATGAACAGTTCCTACATATTCCAAAAATTATTTTGCTATAAACATTTGATGCATGCAGAGAGGGTTTGAATGTTTTTATAATTGGGTTTGGGTTTGGTCATGGTCATGGTTTTTGGTTGGATTTTGGGTGATCTTTTGATTGGGTTTTAGTTGGATTTTAGTGTGTTTGGGATGGCTTGTGAGAAGTCCTAAGTAAATGTGTAGTGTATGGTATTATTTAAAAGGTTTAAAGTCCACTTTGATCTGGTTTGTTACCTTTACAACTGTTTTGATATTTGAAGTTTAAAATTCGTACCTAACAAATCCATGATAATTTAAAAAGTGAGTTCCATTTTACTACGTTTGTTGTTGTTTACCTATGTTACGTTTGTTGTTGTTTACCTATGTTTCGTACTTGTACGGACATGTGAGCTCATTTTCAAAGGATCTTTTATAGAAATATTGTAATTTAAAAAACTATTTAGAAAAATATTGTTGTTTCTAAAATATTTATAAAAATATAGTTGTTTTTCTTGATAAACGAGATTTGTTTTAAAAAAATTAAAAAAAAAAAAGAAATCTGCCTGCCACACATGTCAACTATCAAGTCTGTGGCGGGCATAATTTTGTTGAAGATAGATCGTAAGTTGAACTTGCGACCTACCCCATCT

mRNA sequence

CTTCTCCCGCAGCTTCAGTTCACCTTCTCCTCCGTCATTTCTGAGCCTTTTTGCAATCTCTCTCTATCTCTCTTTCTCTCTCTTCCATGGCTTTGCATCTCTCTCTCTCTCCGCCTTCGATCAGATCGTCGCCGTCGTTTCCCTGCAGCGGAAGGCAGCTGATCGCCGCACTTTCTGAGTCGAAAAGTGGCTGCTTCAATTCGAAGAGCTTGAGTGTCACTAGTAGCAGGAACATTGGTGTTTCCGGTGGAAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGACACTTTCTGGCCCATTGTCAATGCCGCCGGTGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTCGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTTGTGCCAACTTTCAAAATTCTAAAGGATAACAAGGTTGTTAAAGAAGTAACTGGGGCAAAGTTTGATGATTTGGTTCATGCCATTGATACTGTAAGATCCAGCTGAAAACTCTCCTGTCTTCTCTTCTTTGTAAATTCAAATAATATGATGCAAGGAAGAGTATCCAGGACAGTTATTTATTTTACTCTATTTATTTAATAATTTTGTGTACTGTTAAGTTTTAAGGAAGAAGCTGTTCAACAATATTCTTCTTCTTGCTAAGATAGTGGGAAATGATTCTGTATATAGTTGTTTGGGACATAGACATTTGAATATGGACAATGAACAGTTCCTACATATTCCAAAAATTATTTTGCTATAAACATTTGATGCATGCAGAGAGGGTTTGAATGTTTTTATAATTGGGTTTGGGTTTGGTCATGGTCATGGTTTTTGGTTGGATTTTGGGTGATCTTTTGATTGGGTTTTAGTTGGATTTTAGTGTGTTTGGGATGGCTTGTGAGAAGTCCTAAGTAAATGTGTAGTGTATGGTATTATTTAAAAGGTTTAAAGTCCACTTTGATCTGGTTTGTTACCTTTACAACTGTTTTGATATTTGAAGTTTAAAATTCGTACCTAACAAATCCATGATAATTTAAAAAGTGAGTTCCATTTTACTACGTTTGTTGTTGTTTACCTATGTTACGTTTGTTGTTGTTTACCTATGTTTCGTACTTGTACGGACATGTGAGCTCATTTTCAAAGGATCTTTTATAGAAATATTGTAATTTAAAAAACTATTTAGAAAAATATTGTTGTTTCTAAAATATTTATAAAAATATAGTTGTTTTTCTTGATAAACGAGATTTGTTTTAAAAAAATTAAAAAAAAAAAAGAAATCTGCCTGCCACACATGTCAACTATCAAGTCTGTGGCGGGCATAATTTTGTTGAAGATAGATCGTAAGTTGAACTTGCGACCTACCCCATCT

Coding sequence (CDS)

ATGGCTTTGCATCTCTCTCTCTCTCCGCCTTCGATCAGATCGTCGCCGTCGTTTCCCTGCAGCGGAAGGCAGCTGATCGCCGCACTTTCTGAGTCGAAAAGTGGCTGCTTCAATTCGAAGAGCTTGAGTGTCACTAGTAGCAGGAACATTGGTGTTTCCGGTGGAAATCGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGACACTTTCTGGCCCATTGTCAATGCCGCCGGTGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGAATTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTCGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTTGTGCCAACTTTCAAAATTCTAAAGGATAACAAGGTTGTTAAAGAAGTAACTGGGGCAAAGTTTGATGATTTGGTTCATGCCATTGATACTGTAAGATCCAGCTGA

Protein sequence

MALHLSLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSKSLSVTSSRNIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS
BLAST of Lsi06G006590 vs. Swiss-Prot
Match: TRXF_PEA (Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.9e-55
Identity = 124/186 (66.67%), Postives = 142/186 (76.34%), Query Frame = 1

Query: 1   MALHLSLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSKSLSVTSSRNIGVSG----GN 60
           MAL+L  SP  I ++     S  +   A S S +    S S S+  S+ +G+       +
Sbjct: 1   MALNLCTSPKWIGTTVFDSASSSKPSLASSFSTT----SFSSSILCSKRVGLQRLSLRRS 60

Query: 61  RSFKVNSSLETAG--ATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKF 120
            S  V SSLETAG   TVG+VTEVNKDTFWPIVNAAGDKTVVLDM+T+WCGPCKV+AP +
Sbjct: 61  ISVSVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLY 120

Query: 121 QELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAI 180
           +ELS+KYLDVVFLKLDCNQDNK LAKELGIKVVPTFKILKDNK+VKEVTGAKFDDLV AI
Sbjct: 121 EELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAI 180

BLAST of Lsi06G006590 vs. Swiss-Prot
Match: TRXF1_ARATH (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 3.6e-51
Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 1

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120
           V  SLET   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEK
Sbjct: 56  VRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEK 115

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 180
           Y DVVFLKLDCN DN+PLAKELGI+VVPTFKILKDNKVVKEVTGAK+DDLV AI+T RS+
Sbjct: 116 YDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSA 175

BLAST of Lsi06G006590 vs. Swiss-Prot
Match: TRXF2_ARATH (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.8e-51
Identity = 116/186 (62.37%), Postives = 129/186 (69.35%), Query Frame = 1

Query: 1   MALHLSLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSKSLSVTS----SRNIGVSGGN 60
           ++L L+ SP S R SP             S  K  C    S   T     S   GV    
Sbjct: 3   LSLRLAPSPTSFRYSPITSTGA----GGFSPVKQHCRIPNSGVATKIGFCSGGGGVLDSG 62

Query: 61  R---SFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPK 120
           R   S  V  SLET   TVGQVTEV+KDTFWPIV AAGDK VVLDMYTQWCGPCKV+APK
Sbjct: 63  RRIGSCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPK 122

Query: 121 FQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHA 180
           ++ELSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKDNKVVKEVTGAK++DL+ A
Sbjct: 123 YKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAA 182

BLAST of Lsi06G006590 vs. Swiss-Prot
Match: TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.4e-50
Identity = 112/179 (62.57%), Postives = 133/179 (74.30%), Query Frame = 1

Query: 9   PPSIRSSPSFPCSGRQLIAALSESKSGC-FNSKSLSVTSSRNIG------VSGGNRSFKV 68
           P S+R +PS P +        S +K  C   S S   T++R IG      V  G+ S  V
Sbjct: 2   PLSLRLAPS-PTALSPTTGGFSPAKKQCRIPSYSGVATTTRRIGLCSLDYVKRGDSSV-V 61

Query: 69  NSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKY 128
             SL+T   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEKY
Sbjct: 62  RCSLQTVNVSVGQVTEVDKDTFWPIVKAAGEKIVVLDMYTQWCGPCKVIAPKYKALSEKY 121

Query: 129 LDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 181
            DVVFLKLDCN +N+PLAKELGI+VVPTFKILKDN+VVKEVTGAK+DDLV AI+T RS+
Sbjct: 122 EDVVFLKLDCNPENRPLAKELGIRVVPTFKILKDNQVVKEVTGAKYDDLVAAIETARSA 178

BLAST of Lsi06G006590 vs. Swiss-Prot
Match: TRXF_ORYSJ (Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0913000 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.4e-49
Identity = 98/128 (76.56%), Postives = 107/128 (83.59%), Query Frame = 1

Query: 53  SGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAP 112
           S G+ +  V +  E    T GQVTEVNKDTFWPIV +AG K VVLDMYTQWCGPCKVMAP
Sbjct: 61  SSGSDTATVGAEAEAVAVT-GQVTEVNKDTFWPIVKSAGPKVVVLDMYTQWCGPCKVMAP 120

Query: 113 KFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVH 172
           KFQE+SEK  DVVFLKLDCNQDNK LAKELGIKVVPTFKILKD KVVKEVTGAK D+L+ 
Sbjct: 121 KFQEMSEKDQDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDGKVVKEVTGAKLDELIQ 180

Query: 173 AIDTVRSS 181
           AI+TV+SS
Sbjct: 181 AIETVKSS 187

BLAST of Lsi06G006590 vs. TrEMBL
Match: A0A0A0M340_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G651650 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 5.4e-86
Identity = 164/180 (91.11%), Postives = 172/180 (95.56%), Query Frame = 1

Query: 1   MALHLSLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSKSLSVTSSRNIGVSGGNRSFK 60
           MALH SLSPPS+RSSPSFPCSGRQ IA LSESKSGCF+S+SLS++SSR+IGVSG N SFK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIATLSESKSGCFSSRSLSLSSSRSIGVSGRNGSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120
           VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCN DNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFD+LVHAID VRSS
Sbjct: 121 YLDVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 180

BLAST of Lsi06G006590 vs. TrEMBL
Match: W9S6Z2_9ROSA (Thioredoxin F-type OS=Morus notabilis GN=L484_015151 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.8e-63
Identity = 132/177 (74.58%), Postives = 146/177 (82.49%), Query Frame = 1

Query: 6   SLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSK-SLSVTSSRNIGVS-GGNRSFKVNS 65
           +LSP S+RS PS PC+ +Q IA  S S S CF SK ++ +  S   G    G+ S  V S
Sbjct: 8   TLSPQSVRSPPSLPCAAKQQIALPSSSSSSCFGSKKNVVLRFSGGAGTKRAGSYSRSVRS 67

Query: 66  SLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYLD 125
           SLET   TVG+VTEVNKD+FWPIVNAAGDKTVVLDMYTQWCGPCKV+APKFQELSEKYLD
Sbjct: 68  SLETLRPTVGKVTEVNKDSFWPIVNAAGDKTVVLDMYTQWCGPCKVIAPKFQELSEKYLD 127

Query: 126 VVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 181
           VVFLKLDCNQDNK LAKELGI+VVPTFKILKD+K+VKEVTGAKFDDLV AIDTVRSS
Sbjct: 128 VVFLKLDCNQDNKALAKELGIRVVPTFKILKDSKIVKEVTGAKFDDLVVAIDTVRSS 184

BLAST of Lsi06G006590 vs. TrEMBL
Match: A0A061EZE7_THECC (Thioredoxin F-type 1 OS=Theobroma cacao GN=TCM_025160 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.0e-60
Identity = 132/186 (70.97%), Postives = 147/186 (79.03%), Query Frame = 1

Query: 3   LHLSLSPPS-IRSSPSFPCSGRQLIAALSESKSG---CF---NSKSLSVTSSRNIGVSGG 62
           L  +LSPPS IRSSPS  C+    +AA   + S    CF   +S S +V +  N+  +G 
Sbjct: 4   LQFTLSPPSTIRSSPSLSCTAAHPLAASCRASSAWKSCFLLESSSSKTVKAMSNVNNNGR 63

Query: 63  NRSF-KVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKF 122
           N +  KV SSL+TAGA VGQV EV KDTFWPIVNAAGDKTVVLDMYTQWCGPCKV+APKF
Sbjct: 64  NGAVVKVRSSLDTAGAKVGQVKEVTKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVIAPKF 123

Query: 123 QELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAI 181
           QELSEKYLDVVFLKLDCNQDNKPLAKELGI+VVPTFKILK  K+VKEV GAKFDDLV AI
Sbjct: 124 QELSEKYLDVVFLKLDCNQDNKPLAKELGIRVVPTFKILKHKKIVKEVKGAKFDDLVLAI 183

BLAST of Lsi06G006590 vs. TrEMBL
Match: A0A0B0NF42_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02203 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.5e-59
Identity = 134/192 (69.79%), Postives = 146/192 (76.04%), Query Frame = 1

Query: 3   LHLSLSPPS-IRSSPSFPCSGRQLIA-------------ALSESKSGCFNSKSLSVTSSR 62
           L  S+ PPS +RSSPS  C+    IA             AL  S     NS S S  ++R
Sbjct: 4   LQSSVYPPSTLRSSPSLSCTAAHPIASSHRVPSTSNSFVALESSSLKTVNSIS-SAKNNR 63

Query: 63  NIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCK 122
             GV G     KV SSLETAGATVGQVTEV KDTFWPIVNAAGDKTVVLDMYTQWCGPCK
Sbjct: 64  RKGVVG-----KVRSSLETAGATVGQVTEVTKDTFWPIVNAAGDKTVVLDMYTQWCGPCK 123

Query: 123 VMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFD 181
           V+APKFQELSEKYLDVVFLKLDCNQ+NKPLAKELGI+VVPTFKILK NK+VKEVTGAK+D
Sbjct: 124 VIAPKFQELSEKYLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKHNKIVKEVTGAKYD 183

BLAST of Lsi06G006590 vs. TrEMBL
Match: A0A0D2VB49_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G132000 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.5e-59
Identity = 134/192 (69.79%), Postives = 146/192 (76.04%), Query Frame = 1

Query: 3   LHLSLSPPS-IRSSPSFPCSGRQLIA-------------ALSESKSGCFNSKSLSVTSSR 62
           L  S+ PPS +RSSPS  C+    IA             AL  S     NS S S  ++R
Sbjct: 4   LQSSVYPPSTLRSSPSLSCTAAHPIASSHRVPSTSNSFVALESSSLKTVNSIS-SAKNNR 63

Query: 63  NIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCK 122
             GV G     KV SSLETAGATVGQVTEV KDTFWPIVNAAGDKTVVLDMYTQWCGPCK
Sbjct: 64  RKGVVG-----KVRSSLETAGATVGQVTEVTKDTFWPIVNAAGDKTVVLDMYTQWCGPCK 123

Query: 123 VMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFD 181
           V+APKFQELSEKYLDVVFLKLDCNQ+NKPLAKELGI+VVPTFKILK NK+VKEVTGAK+D
Sbjct: 124 VIAPKFQELSEKYLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKHNKIVKEVTGAKYD 183

BLAST of Lsi06G006590 vs. TAIR10
Match: AT3G02730.1 (AT3G02730.1 thioredoxin F-type 1)

HSP 1 Score: 202.6 bits (514), Expect = 2.1e-52
Identity = 97/120 (80.83%), Postives = 108/120 (90.00%), Query Frame = 1

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120
           V  SLET   +VGQVTEV+KDTFWPIV AAG+K VVLDMYTQWCGPCKV+APK++ LSEK
Sbjct: 56  VRCSLETVNVSVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEK 115

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 180
           Y DVVFLKLDCN DN+PLAKELGI+VVPTFKILKDNKVVKEVTGAK+DDLV AI+T RS+
Sbjct: 116 YDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSA 175

BLAST of Lsi06G006590 vs. TAIR10
Match: AT5G16400.1 (AT5G16400.1 thioredoxin F2)

HSP 1 Score: 202.2 bits (513), Expect = 2.7e-52
Identity = 116/186 (62.37%), Postives = 129/186 (69.35%), Query Frame = 1

Query: 1   MALHLSLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSKSLSVTS----SRNIGVSGGN 60
           ++L L+ SP S R SP             S  K  C    S   T     S   GV    
Sbjct: 3   LSLRLAPSPTSFRYSPITSTGA----GGFSPVKQHCRIPNSGVATKIGFCSGGGGVLDSG 62

Query: 61  R---SFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPK 120
           R   S  V  SLET   TVGQVTEV+KDTFWPIV AAGDK VVLDMYTQWCGPCKV+APK
Sbjct: 63  RRIGSCVVRCSLETVNVTVGQVTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPK 122

Query: 121 FQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHA 180
           ++ELSEKY D+VFLKLDCNQDNKPLAKELGI+VVPTFKILKDNKVVKEVTGAK++DL+ A
Sbjct: 123 YKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAA 182

BLAST of Lsi06G006590 vs. TAIR10
Match: AT3G51030.1 (AT3G51030.1 thioredoxin H-type 1)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-13
Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 1

Query: 73  GQVTEVNKDTFW--PIVNAAGDKT-VVLDMYTQWCGPCKVMAPKFQELSEKYLDVVFLKL 132
           GQV   +    W   +  A   KT VV+D    WCGPC+ +AP F +L++K  +V+FLK+
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 133 DCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAI 175
           D   + K +A +  I+ +PTF  LK+ K++ +V GAK D+L   I
Sbjct: 66  D-TDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTI 109

BLAST of Lsi06G006590 vs. TAIR10
Match: AT5G39950.1 (AT5G39950.1 thioredoxin 2)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12
Identity = 30/88 (34.09%), Postives = 55/88 (62.50%), Query Frame = 1

Query: 92  DKTVVLDMYTQWCGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFK 151
           +K +V+D    WCGPC+++ P    +++K+ DV F+KLD + +   +AKE  +  +PTF 
Sbjct: 47  NKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVD-ELPDVAKEFNVTAMPTFV 106

Query: 152 ILKDNKVVKEVTGAKFDDLVHAIDTVRS 180
           ++K  K ++ + GAK D+L   +  +R+
Sbjct: 107 LVKRGKEIERIIGAKKDELEKKVSKLRA 133

BLAST of Lsi06G006590 vs. TAIR10
Match: AT5G42980.1 (AT5G42980.1 thioredoxin 3)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12
Identity = 29/79 (36.71%), Postives = 54/79 (68.35%), Query Frame = 1

Query: 93  KTVVLDMYTQWCGPCKVMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKI 152
           K +V+D    WC PC+ +AP F +L++K+LDVVF K+D ++ N  +A+E  ++ +PTF  
Sbjct: 28  KLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELN-TVAEEFKVQAMPTFIF 87

Query: 153 LKDNKVVKEVTGAKFDDLV 172
           +K+ ++ + V GA  ++++
Sbjct: 88  MKEGEIKETVVGAAKEEII 105

BLAST of Lsi06G006590 vs. NCBI nr
Match: gi|659085863|ref|XP_008443649.1| (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 5.7e-89
Identity = 168/180 (93.33%), Postives = 176/180 (97.78%), Query Frame = 1

Query: 1   MALHLSLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSKSLSVTSSRNIGVSGGNRSFK 60
           MALH SLSPPS+RSSPSFPCSGRQ I ALS+SKSGCF+S+SLSV+SSR+IGVSGGNRSFK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIPALSDSKSGCFSSRSLSVSSSRSIGVSGGNRSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120
           VNSSLETAGATVG+VTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEK
Sbjct: 61  VNSSLETAGATVGKVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFDDLVHAIDTVRSS
Sbjct: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDDLVHAIDTVRSS 180

BLAST of Lsi06G006590 vs. NCBI nr
Match: gi|449442647|ref|XP_004139092.1| (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 7.8e-86
Identity = 164/180 (91.11%), Postives = 172/180 (95.56%), Query Frame = 1

Query: 1   MALHLSLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSKSLSVTSSRNIGVSGGNRSFK 60
           MALH SLSPPS+RSSPSFPCSGRQ IA LSESKSGCF+S+SLS++SSR+IGVSG N SFK
Sbjct: 1   MALHFSLSPPSVRSSPSFPCSGRQPIATLSESKSGCFSSRSLSLSSSRSIGVSGRNGSFK 60

Query: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEK 120
           VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQ+LSEK
Sbjct: 61  VNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEK 120

Query: 121 YLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 180
           YLDVVFLKLDCN DNKPLAKELGIKVVPTFKILKD KVVKEVTGAKFD+LVHAID VRSS
Sbjct: 121 YLDVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS 180

BLAST of Lsi06G006590 vs. NCBI nr
Match: gi|703155026|ref|XP_010111095.1| (Thioredoxin F-type [Morus notabilis])

HSP 1 Score: 249.2 bits (635), Expect = 5.4e-63
Identity = 132/177 (74.58%), Postives = 146/177 (82.49%), Query Frame = 1

Query: 6   SLSPPSIRSSPSFPCSGRQLIAALSESKSGCFNSK-SLSVTSSRNIGVS-GGNRSFKVNS 65
           +LSP S+RS PS PC+ +Q IA  S S S CF SK ++ +  S   G    G+ S  V S
Sbjct: 8   TLSPQSVRSPPSLPCAAKQQIALPSSSSSSCFGSKKNVVLRFSGGAGTKRAGSYSRSVRS 67

Query: 66  SLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYLD 125
           SLET   TVG+VTEVNKD+FWPIVNAAGDKTVVLDMYTQWCGPCKV+APKFQELSEKYLD
Sbjct: 68  SLETLRPTVGKVTEVNKDSFWPIVNAAGDKTVVLDMYTQWCGPCKVIAPKFQELSEKYLD 127

Query: 126 VVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAIDTVRSS 181
           VVFLKLDCNQDNK LAKELGI+VVPTFKILKD+K+VKEVTGAKFDDLV AIDTVRSS
Sbjct: 128 VVFLKLDCNQDNKALAKELGIRVVPTFKILKDSKIVKEVTGAKFDDLVVAIDTVRSS 184

BLAST of Lsi06G006590 vs. NCBI nr
Match: gi|590638013|ref|XP_007029275.1| (Thioredoxin F-type 1 [Theobroma cacao])

HSP 1 Score: 239.6 bits (610), Expect = 4.3e-60
Identity = 132/186 (70.97%), Postives = 147/186 (79.03%), Query Frame = 1

Query: 3   LHLSLSPPS-IRSSPSFPCSGRQLIAALSESKSG---CF---NSKSLSVTSSRNIGVSGG 62
           L  +LSPPS IRSSPS  C+    +AA   + S    CF   +S S +V +  N+  +G 
Sbjct: 4   LQFTLSPPSTIRSSPSLSCTAAHPLAASCRASSAWKSCFLLESSSSKTVKAMSNVNNNGR 63

Query: 63  NRSF-KVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKF 122
           N +  KV SSL+TAGA VGQV EV KDTFWPIVNAAGDKTVVLDMYTQWCGPCKV+APKF
Sbjct: 64  NGAVVKVRSSLDTAGAKVGQVKEVTKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVIAPKF 123

Query: 123 QELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFDDLVHAI 181
           QELSEKYLDVVFLKLDCNQDNKPLAKELGI+VVPTFKILK  K+VKEV GAKFDDLV AI
Sbjct: 124 QELSEKYLDVVFLKLDCNQDNKPLAKELGIRVVPTFKILKHKKIVKEVKGAKFDDLVLAI 183

BLAST of Lsi06G006590 vs. NCBI nr
Match: gi|823263147|ref|XP_012464337.1| (PREDICTED: thioredoxin F-type, chloroplastic-like [Gossypium raimondii])

HSP 1 Score: 236.5 bits (602), Expect = 3.6e-59
Identity = 134/192 (69.79%), Postives = 146/192 (76.04%), Query Frame = 1

Query: 3   LHLSLSPPS-IRSSPSFPCSGRQLIA-------------ALSESKSGCFNSKSLSVTSSR 62
           L  S+ PPS +RSSPS  C+    IA             AL  S     NS S S  ++R
Sbjct: 4   LQSSVYPPSTLRSSPSLSCTAAHPIASSHRVPSTSNSFVALESSSLKTVNSIS-SAKNNR 63

Query: 63  NIGVSGGNRSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCK 122
             GV G     KV SSLETAGATVGQVTEV KDTFWPIVNAAGDKTVVLDMYTQWCGPCK
Sbjct: 64  RKGVVG-----KVRSSLETAGATVGQVTEVTKDTFWPIVNAAGDKTVVLDMYTQWCGPCK 123

Query: 123 VMAPKFQELSEKYLDVVFLKLDCNQDNKPLAKELGIKVVPTFKILKDNKVVKEVTGAKFD 181
           V+APKFQELSEKYLDVVFLKLDCNQ+NKPLAKELGI+VVPTFKILK NK+VKEVTGAK+D
Sbjct: 124 VIAPKFQELSEKYLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKHNKIVKEVTGAKYD 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TRXF_PEA1.9e-5566.67Thioredoxin F-type, chloroplastic OS=Pisum sativum PE=2 SV=1[more]
TRXF1_ARATH3.6e-5180.83Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2[more]
TRXF2_ARATH4.8e-5162.37Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1[more]
TRXF_BRANA2.4e-5062.57Thioredoxin F-type, chloroplastic OS=Brassica napus GN=TRXF PE=2 SV=1[more]
TRXF_ORYSJ3.4e-4976.56Thioredoxin F, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0913000 PE=... [more]
Match NameE-valueIdentityDescription
A0A0A0M340_CUCSA5.4e-8691.11Uncharacterized protein OS=Cucumis sativus GN=Csa_1G651650 PE=4 SV=1[more]
W9S6Z2_9ROSA3.8e-6374.58Thioredoxin F-type OS=Morus notabilis GN=L484_015151 PE=4 SV=1[more]
A0A061EZE7_THECC3.0e-6070.97Thioredoxin F-type 1 OS=Theobroma cacao GN=TCM_025160 PE=4 SV=1[more]
A0A0B0NF42_GOSAR2.5e-5969.79Uncharacterized protein OS=Gossypium arboreum GN=F383_02203 PE=4 SV=1[more]
A0A0D2VB49_GOSRA2.5e-5969.79Uncharacterized protein OS=Gossypium raimondii GN=B456_013G132000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G02730.12.1e-5280.83 thioredoxin F-type 1[more]
AT5G16400.12.7e-5262.37 thioredoxin F2[more]
AT3G51030.11.4e-1339.05 thioredoxin H-type 1[more]
AT5G39950.12.1e-1234.09 thioredoxin 2[more]
AT5G42980.12.1e-1236.71 thioredoxin 3[more]
Match NameE-valueIdentityDescription
gi|659085863|ref|XP_008443649.1|5.7e-8993.33PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo][more]
gi|449442647|ref|XP_004139092.1|7.8e-8691.11PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis sativus][more]
gi|703155026|ref|XP_010111095.1|5.4e-6374.58Thioredoxin F-type [Morus notabilis][more]
gi|590638013|ref|XP_007029275.1|4.3e-6070.97Thioredoxin F-type 1 [Theobroma cacao][more]
gi|823263147|ref|XP_012464337.1|3.6e-5969.79PREDICTED: thioredoxin F-type, chloroplastic-like [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis
GO:0006662glycerol ether metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein disulfide oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR017937Thioredoxin_CS
IPR013766Thioredoxin_domain
IPR012336Thioredoxin-like_fold
IPR005746Thioredoxin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005623 cell
cellular_component GO:0005575 cellular_component
molecular_function GO:0015035 protein disulfide oxidoreductase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G006590.1Lsi06G006590.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005746ThioredoxinPANTHERPTHR10438THIOREDOXINcoord: 3..175
score: 6.7
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 67..175
score: 1.3
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 68..176
score: 2.18
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 75..175
score: 6.3
IPR013766Thioredoxin domainPROFILEPS51352THIOREDOXIN_2coord: 66..179
score: 1
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 96..114
scor
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 143..154
score: 2.7E-5coord: 95..103
score: 2.7E-5coord: 103..112
score: 2.
NoneNo IPR availablePANTHERPTHR10438:SF258THIOREDOXIN F1, CHLOROPLASTIC-RELATEDcoord: 3..175
score: 6.7