Carg22709 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAATGGCTTTGCGTCTCCCTCTCACTCCGCCGTCGATCAGGCCCTCGACGTCGTTGCCTTGCAACGGAAAGCAACCGATTGCTTCTCTTTCGGACTCGAAGAGCGGCTGCTTCAGTTCAAAGAGCTTGAATGTTACCAGTCGCAGGAGCATTGGTGTTTCCGGTGGAAATCGCTCCTTCAAGGTCAATTCTAGCTTAGATATTGCCGGAGCTACCGTCGGCCAGGTCACCGAGGTCAACAAGGACACTTTCTGGCCCATCGTCAATGCTGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTTTGTGCTTCTGCGTATCCTTAAGCCTATACTTCTCTTTGTGGTTTCTGTACTTACTATATGAGATTGTTGAGGAGTTATGGCTGCCATGATCTTGTGTTTGTATGTCATTTCTGGTTTTCTGATTTTCTGATCTTAGGATGGAAATTAGGGAAGGAAGGCGATGCTTAGTTGTGGAGTTTAGATCTCCTAGTTTTAGGAATTGAAGGGAAACTTTGGTGTTTCTTAGGCGTCTGTTTGTCAAATGTTTCTGAAATTCATATAATTAATCCTTGCAATGAGTTTGACCTAGATTAAAAAATTAAGAATCAGAGGATGACGGGTTTTCCCTCTTCTTTTGAAGCAATAGTTAGGTCTAGAAAACTGGTTTTAGTTTTGGTTTGTGGAATTTTGAGTTCAAATCTCTGACTGGACTAGATTAAGCTTAATAGCTTGAATTTTTAGGATAATACTAAGATAAATTATTGAGGAGGTTGGTGGTTCTACATTGAGTTATTTTTGCAATCTAAGACCATGTTGGAACAATTTATAGTTCGGACAAGTTCAAGGCAATTCATAATGGGTATTCTTGTGTGAGATCTCACATCGGTTGGAGAGTAGGGAAAGTAGAATGAGACATTCTTGATAAGGGTGTGGAAACCTCTCTCTAGCCTACACATTTTAAAAACCTTGAGGGGAAGCCTGAAAAGGAAAGCCCAACGACGACAAATAGTTGCTAACGGTAGACTTGAACTGTTACAAATGGTATTAGAGTCGGACATTGGGCGATGTGCCAGCAAGGAGGCTAAGCCCTGAAGGGGGTGGACACAAGGCGGTGTGCCAGTAAGGACAATGGGCCTCAAAGGGGGTGGATTGGGAGGTCTCACGTCGATTTGAAAAGGGAACGAGTGCCAGCGAGAATGCTGGGCCTCGAAGGGGGGTGGAGTGTGAGATCCCACATCGGTTGGGGGAGAAGAACGAAACATTTTTTATAAGAGTGTGAAAACCTCTCCCCAGCAGATGCCTTTTAAAAGCTTTAAGGAAAAGCCTGAAAAGTAATTACCATATCTGTTAGTGGTAGACTTGGGCGGTTACATTTTGCTAATTGCTAGTCATTGCAAAGTTGTCGGAGTCAAGCTAATAAACTCATCTTCCATGTCAAGCAATGTATTTGTATATTCAATGATCCTGTGGAACTAAAATAGATATTAGCTGCTTGATTGGTTGTTTCCTTTCCAATAACTTGACATATTTTGGAGGTAATGTTCTCTGTTTTAGGTGAGATTCTATTTGGTGATGGTGCCCTTCTAATGGTGATATGGTTTCTGTTTAACTCTGAAGTAGTTTATCGATGTGCGAATTTTGGGAAAGAAAACTTGAGAAAGAATGAGGAAATGGATTCCTAGAAACACAACACAACACAGCTTGTTTATTGTAATTGAGGCATGCCCTGCCTACATGTCGTAACCTCTTGGATCTTACTGATCTTTCCTTAATATCATTATGCATAAATTTGTTAACTAAAAACCCCTTTCTCCAGTGAAGTTTAGTTGCTCTACATTTTGCAGATATGGAAATGGATAGATAGAAATTAGAAACTTTTCCTGGTATTGAAGTTTTTCTGTGCAATTTCAGGCTCCTTGCAACTTCAATCTTCTATGAAGTTCTAGATTCATATGTGTATTGTCATTGTTTTTGGATCCCCAAGCTTAACCTCTTCATTAACTTTCTATATTCATCCTTAAATACTACATTGAAGGTGTGGACCCTGCAAAGTGATGGCTCCCAAATTCCAAGAATTGTCTGAGAAATATCTTGACGTTATCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGGTTGGTTCCATGATCCCTACTTTCTTGCTGGAGCTTAGGAATGTATATGCATATGGAAGAACACTTCAGCTTTCTCTCTCTCTCTTATGGTGATTTATTTGGCAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCGACGTTCAAAATTCTAAAGAATAAAATGGTAGTTAAAGAAGTAACAGGAGCAAAGTATGATGATTTGGTTCATGCCATTGATGCTGTAAGAACCAGCTGAAGACTCACCTCTTTCTAAGTTTATATGTTGCAAGGAAGAGAGAGTATCCACAACTGTTACTTATTTGACTCTCTTGATTTAATGATTTTGTGTACTGTTAAGTCAGTCCTATGGAAGAAGAAGCAATTCAACAATATTCTTATTCTTCTTCCTGCAAAGATAGTTTGGGAAATGGTTCTGTATATATAGATGTTTGGGGCAGGGTTATTTGAATATGGGCAATGACAGTTCACACTTGCTTTTACATGCTTTCCTTTTCTTTGAACATTTGATGGATTCATATTCCCAATGGATTATAGTTATGCA TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCAATGGCTTTGCGTCTCCCTCTCACTCCGCCGTCGATCAGGCCCTCGACGTCGTTGCCTTGCAACGGAAAGCAACCGATTGCTTCTCTTTCGGACTCGAAGAGCGGCTGCTTCAGTTCAAAGAGCTTGAATGTTACCAGTCGCAGGAGCATTGGTGTTTCCGGTGGAAATCGCTCCTTCAAGGTCAATTCTAGCTTAGATATTGCCGGAGCTACCGTCGGCCAGGTCACCGAGGTCAACAAGGACACTTTCTGGCCCATCGTCAATGCTGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCTCCCAAATTCCAAGAATTGTCTGAGAAATATCTTGACGTTATCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCGACGTTCAAAATTCTAAAGAATAAAATGGTAGTTAAAGAAGTAACAGGAGCAAAGTATGATGATTTGGTTCATGCCATTGATGCTGTAAGAACCAGCTGAAGACTCACCTCTTTCTAAGTTTATATGTTGCAAGGAAGAGAGAGTATCCACAACTGTTACTTATTTGACTCTCTTGATTTAATGATTTTGTGTACTGTTAAGTCAGTCCTATGGAAGAAGAAGCAATTCAACAATATTCTTATTCTTCTTCCTGCAAAGATAGTTTGGGAAATGGTTCTGTATATATAGATGTTTGGGGCAGGGTTATTTGAATATGGGCAATGACAGTTCACACTTGCTTTTACATGCTTTCCTTTTCTTTGAACATTTGATGGATTCATATTCCCAATGGATTATAGTTATGCA ATGGCTTTGCGTCTCCCTCTCACTCCGCCGTCGATCAGGCCCTCGACGTCGTTGCCTTGCAACGGAAAGCAACCGATTGCTTCTCTTTCGGACTCGAAGAGCGGCTGCTTCAGTTCAAAGAGCTTGAATGTTACCAGTCGCAGGAGCATTGGTGTTTCCGGTGGAAATCGCTCCTTCAAGGTCAATTCTAGCTTAGATATTGCCGGAGCTACCGTCGGCCAGGTCACCGAGGTCAACAAGGACACTTTCTGGCCCATCGTCAATGCTGCCGGCGATAAAACCGTTGTGCTCGATATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCTCCCAAATTCCAAGAATTGTCTGAGAAATATCTTGACGTTATCTTTCTAAAGCTTGACTGCAACCAAGACAATAAGCCATTGGCAAAGGAACTTGGGATAAAAGTGGTGCCGACGTTCAAAATTCTAAAGAATAAAATGGTAGTTAAAGAAGTAACAGGAGCAAAGTATGATGATTTGGTTCATGCCATTGATGCTGTAAGAACCAGCTGA MALRLPLTPPSIRPSTSLPCNGKQPIASLSDSKSGCFSSKSLNVTSRRSIGVSGGNRSFKVNSSLDIAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQELSEKYLDVIFLKLDCNQDNKPLAKELGIKVVPTFKILKNKMVVKEVTGAKYDDLVHAIDAVRTS
BLAST of Carg22709 vs. NCBI nr
Match: XP_023520633.1 (thioredoxin F-type, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 354.8 bits (909), Expect = 1.8e-94 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Carg22709 vs. NCBI nr
Match: XP_022933925.1 (thioredoxin F-type, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 354.4 bits (908), Expect = 2.3e-94 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of Carg22709 vs. NCBI nr
Match: XP_022973893.1 (thioredoxin F-type, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 354.4 bits (908), Expect = 2.3e-94 Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of Carg22709 vs. NCBI nr
Match: XP_022157062.1 (thioredoxin F-type, chloroplastic-like [Momordica charantia]) HSP 1 Score: 318.2 bits (814), Expect = 1.8e-83 Identity = 158/180 (87.78%), Postives = 172/180 (95.56%), Query Frame = 0
BLAST of Carg22709 vs. NCBI nr
Match: XP_008443649.1 (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo]) HSP 1 Score: 312.4 bits (799), Expect = 1.0e-81 Identity = 154/180 (85.56%), Postives = 169/180 (93.89%), Query Frame = 0
BLAST of Carg22709 vs. TAIR10
Match: AT5G16400.1 (thioredoxin F2) HSP 1 Score: 198.7 bits (504), Expect = 3.0e-51 Identity = 113/188 (60.11%), Postives = 132/188 (70.21%), Query Frame = 0
BLAST of Carg22709 vs. TAIR10
Match: AT3G02730.1 (thioredoxin F-type 1) HSP 1 Score: 187.6 bits (475), Expect = 6.8e-48 Identity = 105/184 (57.07%), Postives = 131/184 (71.20%), Query Frame = 0
BLAST of Carg22709 vs. TAIR10
Match: AT3G51030.1 (thioredoxin H-type 1) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-12 Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Carg22709 vs. TAIR10
Match: AT5G42980.1 (thioredoxin 3) HSP 1 Score: 67.8 bits (164), Expect = 7.9e-12 Identity = 29/87 (33.33%), Postives = 56/87 (64.37%), Query Frame = 0
BLAST of Carg22709 vs. TAIR10
Match: AT1G19730.1 (Thioredoxin superfamily protein) HSP 1 Score: 67.4 bits (163), Expect = 1.0e-11 Identity = 35/105 (33.33%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of Carg22709 vs. Swiss-Prot
Match: sp|P29450|TRXF_PEA (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.8e-51 Identity = 117/190 (61.58%), Postives = 138/190 (72.63%), Query Frame = 0
BLAST of Carg22709 vs. Swiss-Prot
Match: sp|Q9XFH9|TRXF2_ARATH (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=2 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 5.3e-50 Identity = 113/188 (60.11%), Postives = 132/188 (70.21%), Query Frame = 0
BLAST of Carg22709 vs. Swiss-Prot
Match: sp|O48897|TRXF_BRANA (Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.5e-47 Identity = 107/187 (57.22%), Postives = 130/187 (69.52%), Query Frame = 0
BLAST of Carg22709 vs. Swiss-Prot
Match: sp|Q9XFH8|TRXF1_ARATH (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2) HSP 1 Score: 187.6 bits (475), Expect = 1.2e-46 Identity = 105/184 (57.07%), Postives = 131/184 (71.20%), Query Frame = 0
BLAST of Carg22709 vs. Swiss-Prot
Match: sp|O81332|TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.0e-45 Identity = 108/193 (55.96%), Postives = 129/193 (66.84%), Query Frame = 0
BLAST of Carg22709 vs. TrEMBL
Match: tr|A0A1S3B9B3|A0A1S3B9B3_CUCME (thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 6.7e-82 Identity = 154/180 (85.56%), Postives = 169/180 (93.89%), Query Frame = 0
BLAST of Carg22709 vs. TrEMBL
Match: tr|A0A0A0M340|A0A0A0M340_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 1.8e-79 Identity = 151/180 (83.89%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of Carg22709 vs. TrEMBL
Match: tr|W9S6Z2|W9S6Z2_9ROSA (Thioredoxin F-type OS=Morus notabilis OX=981085 GN=L484_015151 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 8.0e-59 Identity = 130/185 (70.27%), Postives = 143/185 (77.30%), Query Frame = 0
BLAST of Carg22709 vs. TrEMBL
Match: tr|A0A061EZE7|A0A061EZE7_THECC (Thioredoxin F-type 1 OS=Theobroma cacao OX=3641 GN=TCM_025160 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 4.4e-57 Identity = 126/186 (67.74%), Postives = 144/186 (77.42%), Query Frame = 0
BLAST of Carg22709 vs. TrEMBL
Match: tr|A0A0B0NF42|A0A0B0NF42_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_02203 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 3.7e-56 Identity = 120/179 (67.04%), Postives = 139/179 (77.65%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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