Lsi05G022000 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G022000
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMatrix metalloproteinase
Locationchr05 : 28576215 .. 28577051 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCTGCCCCTTACATTGGTCCTCTTCTTCTTCCTCTGTACGCCGCCCTGCCTTCCATCCCCAACAACACTACGCCAAAAACCCACCGCCGCCGTTACTTTCCGGTCAAATTCCACTTCACTGCGGTGGCGCGTGTCCAACGCGTTACATAGACCCCATGCAACGGCGCGTTATGTATTTTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATAAGCAACTTGAGTATAAAAGACGTGAGAACCGTATTTCGTAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGGTACGCTGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGGCAGGCCTTCGACGGCGTGTTGGGGGTTTTGGCGCATTCTTTTTCGCCGGAAATTGGGCGGCTACACCTGGATGCGGCGGAGACGTGGGCAGTGGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCACGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCGGTGAGAGAATCGGTGATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTGGAAATGGATGACGTGGAAGGCGTACAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATTGGAGTCTGATACTTCTGCCAGTCAGCCACCTGTTTCCACGTGTACAACAACATGCCCTTTTTCCCTCGTCTTCTTCCTAATCTCCACTTACCATTTTATTCTTTTTCCATAA

mRNA sequence

ATGTTTCTGCCCCTTACATTGGTCCTCTTCTTCTTCCTCTGTACGCCGCCCTGCCTTCCATCCCCAACAACACTACGCCAAAAACCCACCGCCGCCGTTACTTTCCGGTCAAATTCCACTTCACTGCGGTGGCGCGTGTCCAACGCGTTACATAGACCCCATGCAACGGCGCGTTATGTATTTTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATAAGCAACTTGAGTATAAAAGACGTGAGAACCGTATTTCGTAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGGTACGCTGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGGCAGGCCTTCGACGGCGTGTTGGGGGTTTTGGCGCATTCTTTTTCGCCGGAAATTGGGCGGCTACACCTGGATGCGGCGGAGACGTGGGCAGTGGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCACGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCGGTGAGAGAATCGGTGATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTGGAAATGGATGACGTGGAAGGCGTACAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATTGGAGTCTGATACTTCTGCCAGTCAGCCACCTGTTTCCACGTGTACAACAACATGCCCTTTTTCCCTCGTCTTCTTCCTAATCTCCACTTACCATTTTATTCTTTTTCCATAA

Coding sequence (CDS)

ATGTTTCTGCCCCTTACATTGGTCCTCTTCTTCTTCCTCTGTACGCCGCCCTGCCTTCCATCCCCAACAACACTACGCCAAAAACCCACCGCCGCCGTTACTTTCCGGTCAAATTCCACTTCACTGCGGTGGCGCGTGTCCAACGCGTTACATAGACCCCATGCAACGGCGCGTTATGTATTTTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATAAGCAACTTGAGTATAAAAGACGTGAGAACCGTATTTCGTAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGGTACGCTGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGGCAGGCCTTCGACGGCGTGTTGGGGGTTTTGGCGCATTCTTTTTCGCCGGAAATTGGGCGGCTACACCTGGATGCGGCGGAGACGTGGGCAGTGGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCACGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCGGTGAGAGAATCGGTGATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTGGAAATGGATGACGTGGAAGGCGTACAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATTGGAGTCTGATACTTCTGCCAGTCAGCCACCTGTTTCCACGTGTACAACAACATGCCCTTTTTCCCTCGTCTTCTTCCTAATCTCCACTTACCATTTTATTCTTTTTCCATAA

Protein sequence

MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLELESDTSASQPPVSTCTTTCPFSLVFFLISTYHFILFP
Homology
[Close]
BLAST of Lsi05G022000 vs. Swiss-Prot
Match: 4MMP_ARATH (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.9e-75
Identity = 136/196 (69.39%), Postives = 161/196 (82.14%), Query Frame = 1 

Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H   +YV+FPG+PRWTR +P+ LTYAF +EN    L+  D+R VFR+AF KWA VIPVSF
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEK 173
            ET+DY  ADIKIGF+ GDH DG+ FDGVLGVLAH+FSPE GRLHLD AETWAVDF++EK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 174 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNP 233
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 234 NFKFESLELESDTSAS 250
           NF   SL L S+TS +
Sbjct: 300 NFTLNSL-LASETSTN 314

[Close]
BLAST of Lsi05G022000 vs. Swiss-Prot
Match: 1MMP_ARATH (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-63
Identity = 122/194 (62.89%), Postives = 144/194 (74.23%), Query Frame = 1 

Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H TA Y +F GKP+W R     LTYA  K + +  L+ +DV+TVFR+AFS+W+ VIPVSF
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-KE 173
           EE DD+  AD+KIGFY GDH DG  FDGVLG LAH+F+PE GRLHLDAAETW VD + K 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 174 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSN 233
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L +DDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 234 PNFKFESLELESDT 247
           P  + +SL    D+
Sbjct: 325 PKLRLDSLTQSEDS 335

[Close]
BLAST of Lsi05G022000 vs. Swiss-Prot
Match: 2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.8e-50
Identity = 98/185 (52.97%), Postives = 128/185 (69.19%), Query Frame = 1 

Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++V++VF +AF +W+ V  ++F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKE- 173
             ++ +  +DI IGFY GDH DG+ FDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 174 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 233
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 234 SNPNF 236
           +NPNF
Sbjct: 330 ANPNF 329

[Close]
BLAST of Lsi05G022000 vs. Swiss-Prot
Match: 3MMP_ARATH (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.9e-48
Identity = 96/188 (51.06%), Postives = 123/188 (65.43%), Query Frame = 1 

Query: 52  RPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPV 111
           R HA   Y FFPG+PRW R     LTYAF   N ++    ++V++VF +AF++W  V P+
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPL 211

Query: 112 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 171
           +F   + +  +DI IGFY G+H DG+ FDG +  LAH+FSP  G  HLD  E W V  E 
Sbjct: 212 TFTRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEG 271

Query: 172 EKSAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQA 231
               +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ 
Sbjct: 272 GDGFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQY 331

Query: 232 LYGSNPNF 236
           LYG+NPNF
Sbjct: 332 LYGANPNF 334

[Close]
BLAST of Lsi05G022000 vs. Swiss-Prot
Match: 5MMP_ARATH (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.6e-45
Identity = 89/184 (48.37%), Postives = 122/184 (66.30%), Query Frame = 1 

Query: 56  TARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEE 115
           T +Y FFPGKPRW +R    LTYAF  +N +++    +V+ VF +AF++WA V P++F  
Sbjct: 140 TEKYSFFPGKPRWPKRK-RDLTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTR 199

Query: 116 TDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSA 175
           ++    ADI IGF+ G+H DG+ FDG +G LAH+ SP  G LHLD  E W +   +    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 176 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 235
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

[Close]
BLAST of Lsi05G022000 vs. TrEMBL
Match: A0A0A0L2Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117950 PE=3 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 2.0e-132
Identity = 241/275 (87.64%), Postives = 251/275 (91.27%), Query Frame = 1 

Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYV 60
           MFLPL L+LFFFLCTP CLP PTTL Q PT+AV FRS+S+SL        H PHAT RYV
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSSSL--------HNPHATERYV 60

Query: 61  FFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRWTRRMPMVLTYAFFK+NW+SNLS++DVR VFRKAFSKWAHVIPVSFEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHF 275
           ELESDTSASQPPVSTCT  CPFSL  FFL   +HF
Sbjct: 241 ELESDTSASQPPVSTCTLACPFSLPFFFLFFPHHF 267

[Close]
BLAST of Lsi05G022000 vs. TrEMBL
Match: A5BWA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024635 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.8e-79
Identity = 146/214 (68.22%), Postives = 172/214 (80.37%), Query Frame = 1 

Query: 37  SNSTSLRWRVSNALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRT 96
           S   S R  + +A+   HA   YV+FPGKPRW R +PM LTYAF  EN +  LS++D+R 
Sbjct: 116 SQMMSPRCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRG 175

Query: 97  VFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGR 156
            F++AF++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+
Sbjct: 176 GFKRAFARWASVIPVSFTETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGK 235

Query: 157 LHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKAN 216
            HLDAAETWAVD E EKS VA+DLESVATHEIGHLLGL HS V+ESVMYPSLKPR KKA+
Sbjct: 236 FHLDAAETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKAD 295

Query: 217 LEMDDVEGVQALYGSNPNFKFESLELESDTSASQ 251
           L++DD+E VQALYGSNPNFKF S  +ESD S++Q
Sbjct: 296 LKLDDIEAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]
BLAST of Lsi05G022000 vs. TrEMBL
Match: D7SLT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02280 PE=3 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.8e-79
Identity = 146/214 (68.22%), Postives = 171/214 (79.91%), Query Frame = 1 

Query: 37  SNSTSLRWRVSNALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRT 96
           S   S R  + +A+   HA   YV+FPGKPRW R +PM LTYAF  EN +  LS++D+R 
Sbjct: 116 SQMMSPRCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRG 175

Query: 97  VFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGR 156
            F+ AF++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+
Sbjct: 176 AFKLAFARWASVIPVSFSETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGK 235

Query: 157 LHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKAN 216
            HLDAAETWAVD E EKS VA+DLESVATHEIGHLLGL HS V+ESVMYPSLKPR KKA+
Sbjct: 236 FHLDAAETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKAD 295

Query: 217 LEMDDVEGVQALYGSNPNFKFESLELESDTSASQ 251
           L++DD+E VQALYGSNPNFKF S  +ESD S++Q
Sbjct: 296 LKLDDIEAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]
BLAST of Lsi05G022000 vs. TrEMBL
Match: A0A0S3SVL6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G006600 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-77
Identity = 141/203 (69.46%), Postives = 171/203 (84.24%), Query Frame = 1 

Query: 48  NALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAH 107
           N +H+ H++  +VFFPGKPRW+R MPM LTYAF +EN I +LS+KD+R  FRKAF +WA 
Sbjct: 132 NHVHKVHSSKNFVFFPGKPRWSRSMPMTLTYAFSRENMIHSLSMKDIREAFRKAFLRWAS 191

Query: 108 VIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAV 167
           VIPVSF E  D   +D+KIGFY+G+H DG+ FDGVLGVLAHSFSPEIGRLHLDAAETWAV
Sbjct: 192 VIPVSFVEVSDSEVSDLKIGFYKGEHGDGEPFDGVLGVLAHSFSPEIGRLHLDAAETWAV 251

Query: 168 DFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQA 227
           DFE   S VAVDLESVATHEIGHLLGL HSSV+++VMYPSL+P++K+ANL +DD++GVQ+
Sbjct: 252 DFEATVSEVAVDLESVATHEIGHLLGLSHSSVKDAVMYPSLRPQDKRANLNIDDIKGVQS 311

Query: 228 LYGSNPNFKFESLELESDTSASQ 251
           LYGSNPNF+ E   LESD SA++
Sbjct: 312 LYGSNPNFRSE-WSLESDMSANK 333

[Close]
BLAST of Lsi05G022000 vs. TrEMBL
Match: A0A0L9VUB5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g171500 PE=3 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 1.4e-77
Identity = 141/203 (69.46%), Postives = 171/203 (84.24%), Query Frame = 1 

Query: 48  NALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAH 107
           N +H+ H++  +VFFPGKPRW+R MPM LTYAF +EN I +LS+KD+R  FRKAF +WA 
Sbjct: 132 NHVHKVHSSKNFVFFPGKPRWSRSMPMTLTYAFSRENMIHSLSMKDIREAFRKAFLRWAS 191

Query: 108 VIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAV 167
           VIPVSF E  D   +D+KIGFY+G+H DG+ FDGVLGVLAHSFSPEIGRLHLDAAETWAV
Sbjct: 192 VIPVSFVEVSDSEVSDLKIGFYKGEHGDGEPFDGVLGVLAHSFSPEIGRLHLDAAETWAV 251

Query: 168 DFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQA 227
           DFE   S VAVDLESVATHEIGHLLGL HSSV+++VMYPSL+P++K+ANL +DD++GVQ+
Sbjct: 252 DFEATVSEVAVDLESVATHEIGHLLGLSHSSVKDAVMYPSLRPQDKRANLNIDDIKGVQS 311

Query: 228 LYGSNPNFKFESLELESDTSASQ 251
           LYGSNPNF+ E   LESD SA++
Sbjct: 312 LYGSNPNFRSE-WSLESDMSANK 333

[Close]
BLAST of Lsi05G022000 vs. TAIR10
Match: AT2G45040.1 (AT2G45040.1 Matrixin family protein)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-76
Identity = 136/196 (69.39%), Postives = 161/196 (82.14%), Query Frame = 1 

Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H   +YV+FPG+PRWTR +P+ LTYAF +EN    L+  D+R VFR+AF KWA VIPVSF
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEK 173
            ET+DY  ADIKIGF+ GDH DG+ FDGVLGVLAH+FSPE GRLHLD AETWAVDF++EK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 174 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNP 233
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 234 NFKFESLELESDTSAS 250
           NF   SL L S+TS +
Sbjct: 300 NFTLNSL-LASETSTN 314

[Close]
BLAST of Lsi05G022000 vs. TAIR10
Match: AT4G16640.1 (AT4G16640.1 Matrixin family protein)

HSP 1 Score: 244.6 bits (623), Expect = 7.3e-65
Identity = 122/194 (62.89%), Postives = 144/194 (74.23%), Query Frame = 1 

Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H TA Y +F GKP+W R     LTYA  K + +  L+ +DV+TVFR+AFS+W+ VIPVSF
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-KE 173
           EE DD+  AD+KIGFY GDH DG  FDGVLG LAH+F+PE GRLHLDAAETW VD + K 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 174 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSN 233
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L +DDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 234 PNFKFESLELESDT 247
           P  + +SL    D+
Sbjct: 325 PKLRLDSLTQSEDS 335

[Close]
BLAST of Lsi05G022000 vs. TAIR10
Match: AT1G70170.1 (AT1G70170.1 matrix metalloproteinase)

HSP 1 Score: 199.5 bits (506), Expect = 2.7e-51
Identity = 98/185 (52.97%), Postives = 128/185 (69.19%), Query Frame = 1 

Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++V++VF +AF +W+ V  ++F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKE- 173
             ++ +  +DI IGFY GDH DG+ FDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 174 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 233
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 234 SNPNF 236
           +NPNF
Sbjct: 330 ANPNF 329

[Close]
BLAST of Lsi05G022000 vs. TAIR10
Match: AT1G24140.1 (AT1G24140.1 Matrixin family protein)

HSP 1 Score: 191.8 bits (486), Expect = 5.6e-49
Identity = 96/188 (51.06%), Postives = 123/188 (65.43%), Query Frame = 1 

Query: 52  RPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPV 111
           R HA   Y FFPG+PRW R     LTYAF   N ++    ++V++VF +AF++W  V P+
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPL 211

Query: 112 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 171
           +F   + +  +DI IGFY G+H DG+ FDG +  LAH+FSP  G  HLD  E W V  E 
Sbjct: 212 TFTRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEG 271

Query: 172 EKSAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQA 231
               +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ 
Sbjct: 272 GDGFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQY 331

Query: 232 LYGSNPNF 236
           LYG+NPNF
Sbjct: 332 LYGANPNF 334

[Close]
BLAST of Lsi05G022000 vs. TAIR10
Match: AT1G59970.1 (AT1G59970.1 Matrixin family protein)

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-46
Identity = 89/184 (48.37%), Postives = 122/184 (66.30%), Query Frame = 1 

Query: 56  TARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEE 115
           T +Y FFPGKPRW +R    LTYAF  +N +++    +V+ VF +AF++WA V P++F  
Sbjct: 140 TEKYSFFPGKPRWPKRK-RDLTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTR 199

Query: 116 TDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSA 175
           ++    ADI IGF+ G+H DG+ FDG +G LAH+ SP  G LHLD  E W +   +    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 176 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 235
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

[Close]
BLAST of Lsi05G022000 vs. NCBI nr
Match: gi|659074776|ref|XP_008437790.1| (PREDICTED: metalloendoproteinase 1 [Cucumis melo])

HSP 1 Score: 489.2 bits (1258), Expect = 4.8e-135
Identity = 249/282 (88.30%), Postives = 257/282 (91.13%), Query Frame = 1 

Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVT-FRSNSTSL--RWRVSNALHRPHATA 60
           MFLPL L+LFFFLCTP CLP PTTL Q  TAAV  FRSNS+SL  R R++  LH PHAT 
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLHNPHATE 60

Query: 61  RYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETD 120
           RYVFFPGKPRW RRMPMVLTYAFFKENW+SNLS+KDVR VFRKAFSKWAHVIPVSFEETD
Sbjct: 61  RYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETD 120

Query: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180
           DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA
Sbjct: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180

Query: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKF 240
           VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKF
Sbjct: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKF 240

Query: 241 ESLELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHFILFP 279
           ESLELESDTS +QPPVSTCT  CPFSL  FFLI  YHF LFP
Sbjct: 241 ESLELESDTSDTQPPVSTCTMACPFSLPFFFLIFPYHFFLFP 282

[Close]
BLAST of Lsi05G022000 vs. NCBI nr
Match: gi|778676675|ref|XP_011650638.1| (PREDICTED: metalloendoproteinase 1 [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 2.9e-132
Identity = 241/275 (87.64%), Postives = 251/275 (91.27%), Query Frame = 1 

Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYV 60
           MFLPL L+LFFFLCTP CLP PTTL Q PT+AV FRS+S+SL        H PHAT RYV
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSSSL--------HNPHATERYV 60

Query: 61  FFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRWTRRMPMVLTYAFFK+NW+SNLS++DVR VFRKAFSKWAHVIPVSFEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHF 275
           ELESDTSASQPPVSTCT  CPFSL  FFL   +HF
Sbjct: 241 ELESDTSASQPPVSTCTLACPFSLPFFFLFFPHHF 267

[Close]
BLAST of Lsi05G022000 vs. NCBI nr
Match: gi|147812598|emb|CAN66084.1| (hypothetical protein VITISV_024635 [Vitis vinifera])

HSP 1 Score: 302.4 bits (773), Expect = 8.3e-79
Identity = 146/214 (68.22%), Postives = 172/214 (80.37%), Query Frame = 1 

Query: 37  SNSTSLRWRVSNALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRT 96
           S   S R  + +A+   HA   YV+FPGKPRW R +PM LTYAF  EN +  LS++D+R 
Sbjct: 116 SQMMSPRCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRG 175

Query: 97  VFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGR 156
            F++AF++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+
Sbjct: 176 GFKRAFARWASVIPVSFTETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGK 235

Query: 157 LHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKAN 216
            HLDAAETWAVD E EKS VA+DLESVATHEIGHLLGL HS V+ESVMYPSLKPR KKA+
Sbjct: 236 FHLDAAETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKAD 295

Query: 217 LEMDDVEGVQALYGSNPNFKFESLELESDTSASQ 251
           L++DD+E VQALYGSNPNFKF S  +ESD S++Q
Sbjct: 296 LKLDDIEAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]
BLAST of Lsi05G022000 vs. NCBI nr
Match: gi|225453480|ref|XP_002274477.1| (PREDICTED: metalloendoproteinase 1 [Vitis vinifera])

HSP 1 Score: 302.4 bits (773), Expect = 8.3e-79
Identity = 146/214 (68.22%), Postives = 171/214 (79.91%), Query Frame = 1 

Query: 37  SNSTSLRWRVSNALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRT 96
           S   S R  + +A+   HA   YV+FPGKPRW R +PM LTYAF  EN +  LS++D+R 
Sbjct: 116 SQMMSPRCGMRDAMQPMHAAMHYVYFPGKPRWARPIPMTLTYAFSPENLVGYLSLEDIRG 175

Query: 97  VFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGR 156
            F+ AF++WA VIPVSF ETD Y +ADIKIGFYRGDH DG+ FDGVLGVLAH+FSPE G+
Sbjct: 176 AFKLAFARWASVIPVSFSETDTYSFADIKIGFYRGDHGDGEPFDGVLGVLAHAFSPESGK 235

Query: 157 LHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKAN 216
            HLDAAETWAVD E EKS VA+DLESVATHEIGHLLGL HS V+ESVMYPSLKPR KKA+
Sbjct: 236 FHLDAAETWAVDLESEKSTVAIDLESVATHEIGHLLGLAHSPVKESVMYPSLKPRAKKAD 295

Query: 217 LEMDDVEGVQALYGSNPNFKFESLELESDTSASQ 251
           L++DD+E VQALYGSNPNFKF S  +ESD S++Q
Sbjct: 296 LKLDDIEAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]
BLAST of Lsi05G022000 vs. NCBI nr
Match: gi|764627016|ref|XP_011469197.1| (PREDICTED: metalloendoproteinase 1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 298.1 bits (762), Expect = 1.6e-77
Identity = 149/245 (60.82%), Postives = 182/245 (74.29%), Query Frame = 1 

Query: 8   VLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYVFFPGKPR 67
           +  FFL  PPCLP+ T  +    + +       +    ++++    H    YV+FPGKPR
Sbjct: 11  LFIFFLNFPPCLPTRTATKNTGISEIIAAPRCGAPPPDMNSSTSCLHGMKHYVYFPGKPR 70

Query: 68  WT-RRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYGYADIKI 127
           W  R +PM LTYAF  EN IS LS  D+R  F+++F +W  VIPVSF ET+DYG++DIKI
Sbjct: 71  WVPRTIPMKLTYAFSPENMISYLSSSDIRDAFKRSFDRWGSVIPVSFSETEDYGFSDIKI 130

Query: 128 GFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATH 187
           GFY GDH DG+ FDGVLG+LAHSFSPE GRLHLD AETWAVDF  EKS VAVDLESVATH
Sbjct: 131 GFYAGDHGDGEPFDGVLGILAHSFSPETGRLHLDVAETWAVDFRLEKSPVAVDLESVATH 190

Query: 188 EIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESL-ELESD 247
           EIGHLLGLGHS+V+E+VMYP+L+PREKK +L++DDVEGVQALYGSNPN+   +L ELE  
Sbjct: 191 EIGHLLGLGHSTVKEAVMYPNLRPREKKVDLQVDDVEGVQALYGSNPNYTGGALSELEYS 250

Query: 248 TSASQ 251
           TS +Q
Sbjct: 251 TSTNQ 255

The following BLAST results are available for this feature:
BLAST of Lsi05G022000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
4MMP_ARATH1.9e-7569.39Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1[more]
1MMP_ARATH1.3e-6362.89Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1[more]
2MMP_ARATH4.8e-5052.97Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1[more]
3MMP_ARATH9.9e-4851.06Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1[more]
5MMP_ARATH4.6e-4548.37Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana GN=5MMP PE=1 SV=1[more]
BLAST of Lsi05G022000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2Y8_CUCSA2.0e-13287.64Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117950 PE=3 SV=1[more]
A5BWA2_VITVI5.8e-7968.22Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024635 PE=3 SV=1[more]
D7SLT8_VITVI5.8e-7968.22Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02280 PE=3 SV=... [more]
A0A0S3SVL6_PHAAN1.4e-7769.46Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G006600 PE=... [more]
A0A0L9VUB5_PHAAN1.4e-7769.46Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g171500 PE=3 SV=1[more]
BLAST of Lsi05G022000 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45040.11.1e-7669.39 Matrixin family protein[more]
AT4G16640.17.3e-6562.89 Matrixin family protein[more]
AT1G70170.12.7e-5152.97 matrix metalloproteinase[more]
AT1G24140.15.6e-4951.06 Matrixin family protein[more]
AT1G59970.12.6e-4648.37 Matrixin family protein[more]
BLAST of Lsi05G022000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074776|ref|XP_008437790.1|4.8e-13588.30PREDICTED: metalloendoproteinase 1 [Cucumis melo][more]
gi|778676675|ref|XP_011650638.1|2.9e-13287.64PREDICTED: metalloendoproteinase 1 [Cucumis sativus][more]
gi|147812598|emb|CAN66084.1|8.3e-7968.22hypothetical protein VITISV_024635 [Vitis vinifera][more]
gi|225453480|ref|XP_002274477.1|8.3e-7968.22PREDICTED: metalloendoproteinase 1 [Vitis vinifera][more]
gi|764627016|ref|XP_011469197.1|1.6e-7760.82PREDICTED: metalloendoproteinase 1 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0031012extracellular matrix
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf
IPR021190Pept_M10A
IPR006026Peptidase_Metallo
IPR001818Pept_M10_metallopeptidase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0031012 extracellular matrix
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031225 anchored component of membrane
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008237 metallopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G022000.1Lsi05G022000.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001818Peptidase M10, metallopeptidasePFAMPF00413Peptidase_M10coord: 71..230
score: 3.1
IPR006026Peptidase, metallopeptidaseSMARTSM00235col_5coord: 64..231
score: 1.9
IPR021190Peptidase M10APRINTSPR00138MATRIXINcoord: 217..230
score: 8.2E-31coord: 122..150
score: 8.2E-31coord: 183..208
score: 8.2E-31coord: 98..113
score: 8.2
IPR024079Metallopeptidase, catalytic domainGENE3DG3DSA:3.40.390.10coord: 51..234
score: 1.1
NoneNo IPR availablePANTHERPTHR10201MATRIX METALLOPROTEINASEcoord: 54..236
score: 6.7
NoneNo IPR availablePANTHERPTHR10201:SF140F20P5.11 PROTEINcoord: 54..236
score: 6.7
NoneNo IPR availableunknownSSF55486Metalloproteases ("zincins"), catalytic domaincoord: 61..235
score: 9.54