ClCG05G000280 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG05G000280
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Matrix metalloproteinase-28
Location	CG_Chr05 : 447350 .. 448307 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGCACGAGAATGGTCATTTGTTGGGGCTGGGTCACAGGTCGGTGAGAGAATCGGTGATGTACCCAAGCTTGAAGCCAAGGGAAAAGAAGGCAAATTTAGAAATGGATGACGTGGAAGGCGTGCAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATGGGAGTCTGATACTTCTGCCAATCAGCCACCTGTTTCCACGTGTACAACAACATGGCCTTTTCCCTCGCCTTCTTTCTAATTTCCACTTACCATTTTATTCTTTTTCCATAAGGATAACAAATTTACACACACATATATATATTCTTGCGGGTGGAAAAAAAAAAAAGCGTTCTATTTAATATTTATACATACATATATACATATGGTTGCGATTTCTTATGTTACATAGAAAACTACAAAACATATTTTAATGTAAAATCGTACATAGTTTAACATACGCATTAAACATGATTTTGAGAGCAGAAGGTATTTAGAGTTTTATATCTTGGGTTTATTTCATGAGCAAATGAAATGCATTAAAGAAGAAGTTGAAGTAATCGAAAAGGCGTTGATTATATAAAATACACAGAGTCATGTAGTTTGTTGATATATAATTTGGAAAAGCGAGATACACATACAGTATTAGATTAAGATCATATATAAGAAAATGAAAATTGAAAAAGTATTTGGTTTGTTCAGCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGGGCCGGAGCTTCTTCTTTGCGTGATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGCAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTATGGGATCCCCCGATTGATCCCCACAGTAGAAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA

mRNA sequence

ATGGCGACGCACGAGAATGGTCATTTGTTGGGGCTGGGTCACAGGTCGGTGAGAGAATCGGTGATGTACCCAAGCTTGAAGCCAAGGGAAAAGAAGGCAAATTTAGAAATGGATGACGTGGAAGGCGTGCAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATGGGAGTCTGATACTTCTGCCAATCAGCCACCTGTTTCCACGTCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGGGCCGGAGCTTCTTCTTTGCGTGATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGCAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTATGGGATCCCCCGATTGATCCCCACAGTAGAAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA

Coding sequence (CDS)

ATGGCGACGCACGAGAATGGTCATTTGTTGGGGCTGGGTCACAGGTCGGTGAGAGAATCGGTGATGTACCCAAGCTTGAAGCCAAGGGAAAAGAAGGCAAATTTAGAAATGGATGACGTGGAAGGCGTGCAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATGGGAGTCTGATACTTCTGCCAATCAGCCACCTGTTTCCACGTCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGGGCCGGAGCTTCTTCTTTGCGTGATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGCAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTATGGGATCCCCCGATTGATCCCCACAGTAGAAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA

Protein sequence

MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQPPVSTSQDILEELVAAWSRARGGESGAGASSLRDLILVGGSTGIISRSCRGRAAGYLLASTPIAYLKYGIPRLIPTVEVAAVTEVITKCKF

Homology

[Close]

BLAST of ClCG05G000280 vs. Swiss-Prot
Match: 4MMP_ARATH (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-17
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +A HE GH+LGLGH SV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NPNF   SL  
Sbjct: 249 VAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNPNFTLNSL-L 308

Query: 61  ESDTSAN 68
            S+TS N
Sbjct: 309 ASETSTN 314

[Close]

BLAST of ClCG05G000280 vs. Swiss-Prot
Match: 1MMP_ARATH (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-14
Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGLGH S   +VMYPSL+PR KK +L +DDV GV  LYG NP  + +SL  
Sbjct: 272 VATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPNPKLRLDSLTQ 331

Query: 61  ESDTSAN 68
             D+  N
Sbjct: 332 SEDSIKN 338

[Close]

BLAST of ClCG05G000280 vs. Swiss-Prot
Match: 3MMP_ARATH (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-13
Identity = 38/75 (50.67%), Postives = 45/75 (60.00%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +A HE GHLLGLGH SV  S+MYP+++   +K +L  DDVEGVQ LYG+NPNF       
Sbjct: 282 VAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGANPNF------- 341

Query: 61  ESDTSANQPPVSTSQ 76
                +  PP ST Q
Sbjct: 342 ---NGSRSPPPSTQQ 346

[Close]

BLAST of ClCG05G000280 vs. Swiss-Prot
Match: 2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.9e-13
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNF 54
           +A HE GHLLGLGH SV ES+MYP++   ++K +L  DDVEG+Q LYG+NPNF
Sbjct: 277 VAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGANPNF 329

[Close]

BLAST of ClCG05G000280 vs. Swiss-Prot
Match: MEP1_SOYBN (Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11
Identity = 29/51 (56.86%), Postives = 36/51 (70.59%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNP 52
           +A HE GHLLGLGH S   ++MYPS+ PR +K NL  DD++G++ LYG NP
Sbjct: 255 VAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLYGINP 305

[Close]

BLAST of ClCG05G000280 vs. TrEMBL
Match: A0A0A0L2Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117950 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.8e-29
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESLE 
Sbjct: 175 VATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLEL 234

Query: 61  ESDTSANQPPVST 74
           ESDTSA+QPPVST
Sbjct: 235 ESDTSASQPPVST 247

[Close]

BLAST of ClCG05G000280 vs. TrEMBL
Match: A5AIF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013507 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-19
Identity = 56/96 (58.33%), Postives = 66/96 (68.75%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GH+LGL H SV+E+VMYPSL PR KK +L+ DDVEGVQALYG NPNFKF SL  
Sbjct: 260 VATHEIGHILGLAHSSVKEAVMYPSLSPRRKKVDLKRDDVEGVQALYGPNPNFKFSSL-M 319

Query: 61  ESDTSANQPPVSTSQDILEELVAAWSRARGGESGAG 97
           ESD S+N+  V             +SRAR  E+G G
Sbjct: 320 ESDISSNR-AVGLQIRPSRRTCGKFSRARNNETGRG 353

[Close]

BLAST of ClCG05G000280 vs. TrEMBL
Match: A0A0D2S5T4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G028300 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-19
Identity = 47/68 (69.12%), Postives = 60/68 (88.24%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GH+LGLGH SV+++VMYPSL PR +K +L++DDV+GVQALYGSNPNFKF SL W
Sbjct: 272 VATHEIGHILGLGHSSVKDAVMYPSLSPRSRKVDLKLDDVKGVQALYGSNPNFKFSSL-W 331

Query: 61  ESDTSANQ 69
           ES+ S+N+
Sbjct: 332 ESEISSNK 338

[Close]

BLAST of ClCG05G000280 vs. TrEMBL
Match: D7SLT8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02280 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.6e-19
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGL H  V+ESVMYPSLKPR KKA+L++DD+E VQALYGSNPNFKF S   
Sbjct: 262 VATHEIGHLLGLAHSPVKESVMYPSLKPRAKKADLKLDDIEAVQALYGSNPNFKFAS-SM 321

Query: 61  ESDTSANQ 69
           ESD S+NQ
Sbjct: 322 ESDISSNQ 328

[Close]

BLAST of ClCG05G000280 vs. TrEMBL
Match: A5BWA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024635 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.6e-19
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGL H  V+ESVMYPSLKPR KKA+L++DD+E VQALYGSNPNFKF S   
Sbjct: 262 VATHEIGHLLGLAHSPVKESVMYPSLKPRAKKADLKLDDIEAVQALYGSNPNFKFAS-SM 321

Query: 61  ESDTSANQ 69
           ESD S+NQ
Sbjct: 322 ESDISSNQ 328

[Close]

BLAST of ClCG05G000280 vs. TAIR10
Match: AT2G45040.1 (AT2G45040.1 Matrixin family protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +A HE GH+LGLGH SV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NPNF   SL  
Sbjct: 249 VAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNPNFTLNSL-L 308

Query: 61  ESDTSAN 68
            S+TS N
Sbjct: 309 ASETSTN 314

[Close]

BLAST of ClCG05G000280 vs. TAIR10
Match: AT4G16640.1 (AT4G16640.1 Matrixin family protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 38/67 (56.72%), Postives = 44/67 (65.67%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGLGH S   +VMYPSL+PR KK +L +DDV GV  LYG NP  + +SL  
Sbjct: 272 VATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPNPKLRLDSLTQ 331

Query: 61  ESDTSAN 68
             D+  N
Sbjct: 332 SEDSIKN 338

[Close]

BLAST of ClCG05G000280 vs. TAIR10
Match: AT1G24140.1 (AT1G24140.1 Matrixin family protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 38/75 (50.67%), Postives = 45/75 (60.00%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +A HE GHLLGLGH SV  S+MYP+++   +K +L  DDVEGVQ LYG+NPNF       
Sbjct: 282 VAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGANPNF------- 341

Query: 61  ESDTSANQPPVSTSQ 76
                +  PP ST Q
Sbjct: 342 ---NGSRSPPPSTQQ 346

[Close]

BLAST of ClCG05G000280 vs. TAIR10
Match: AT1G70170.1 (AT1G70170.1 matrix metalloproteinase)

HSP 1 Score: 75.5 bits (184), Expect = 3.3e-14
Identity = 33/53 (62.26%), Postives = 40/53 (75.47%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNF 54
           +A HE GHLLGLGH SV ES+MYP++   ++K +L  DDVEG+Q LYG+NPNF
Sbjct: 277 VAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGANPNF 329

[Close]

BLAST of ClCG05G000280 vs. TAIR10
Match: AT1G59970.1 (AT1G59970.1 Matrixin family protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPN 53
           +A HE GHLLGLGH SV +++M+P++   ++K  L  DD+EG+Q LYG NPN
Sbjct: 267 VAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYGGNPN 318

[Close]

BLAST of ClCG05G000280 vs. NCBI nr
Match: gi|778676675|ref|XP_011650638.1| (PREDICTED: metalloendoproteinase 1 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 2.7e-29
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESLE 
Sbjct: 175 VATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLEL 234

Query: 61  ESDTSANQPPVST 74
           ESDTSA+QPPVST
Sbjct: 235 ESDTSASQPPVST 247

[Close]

BLAST of ClCG05G000280 vs. NCBI nr
Match: gi|659074776|ref|XP_008437790.1| (PREDICTED: metalloendoproteinase 1 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 1.7e-28
Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESLE 
Sbjct: 186 VATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLEL 245

Query: 61  ESDTSANQPPVST 74
           ESDTS  QPPVST
Sbjct: 246 ESDTSDTQPPVST 258

[Close]

BLAST of ClCG05G000280 vs. NCBI nr
Match: gi|147773502|emb|CAN66781.1| (hypothetical protein VITISV_013507 [Vitis vinifera])

HSP 1 Score: 103.6 bits (257), Expect = 3.2e-19
Identity = 56/96 (58.33%), Postives = 66/96 (68.75%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GH+LGL H SV+E+VMYPSL PR KK +L+ DDVEGVQALYG NPNFKF SL  
Sbjct: 260 VATHEIGHILGLAHSSVKEAVMYPSLSPRRKKVDLKRDDVEGVQALYGPNPNFKFSSL-M 319

Query: 61  ESDTSANQPPVSTSQDILEELVAAWSRARGGESGAG 97
           ESD S+N+  V             +SRAR  E+G G
Sbjct: 320 ESDISSNR-AVGLQIRPSRRTCGKFSRARNNETGRG 353

[Close]

BLAST of ClCG05G000280 vs. NCBI nr
Match: gi|823183227|ref|XP_012488777.1| (PREDICTED: metalloendoproteinase 1-like [Gossypium raimondii])

HSP 1 Score: 103.2 bits (256), Expect = 4.2e-19
Identity = 47/68 (69.12%), Postives = 60/68 (88.24%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GH+LGLGH SV+++VMYPSL PR +K +L++DDV+GVQALYGSNPNFKF SL W
Sbjct: 272 VATHEIGHILGLGHSSVKDAVMYPSLSPRSRKVDLKLDDVKGVQALYGSNPNFKFSSL-W 331

Query: 61  ESDTSANQ 69
           ES+ S+N+
Sbjct: 332 ESEISSNK 338

[Close]

BLAST of ClCG05G000280 vs. NCBI nr
Match: gi|225453480|ref|XP_002274477.1| (PREDICTED: metalloendoproteinase 1 [Vitis vinifera])

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-18
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 1


Query: 1   MATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEW 60
           +ATHE GHLLGL H  V+ESVMYPSLKPR KKA+L++DD+E VQALYGSNPNFKF S   
Sbjct: 262 VATHEIGHLLGLAHSPVKESVMYPSLKPRAKKADLKLDDIEAVQALYGSNPNFKFAS-SM 321

Query: 61  ESDTSANQ 69
           ESD S+NQ
Sbjct: 322 ESDISSNQ 328

The following BLAST results are available for this feature:

BLAST of ClCG05G000280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
4MMP_ARATH	2.3e-17	64.18	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana GN=4MMP PE=1 SV=1	[more]
1MMP_ARATH	1.8e-14	56.72	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana GN=1MMP PE=1 SV=1	[more]
3MMP_ARATH	2.7e-13	50.67	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana GN=3MMP PE=1 SV=1	[more]
2MMP_ARATH	5.9e-13	62.26	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana GN=2MMP PE=1 SV=1	[more]
MEP1_SOYBN	4.2e-11	56.86	Metalloendoproteinase 1 OS=Glycine max PE=1 SV=2	[more]

BLAST of ClCG05G000280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2Y8_CUCSA	1.8e-29	91.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117950 PE=3 SV=1	[more]
A5AIF2_VITVI	2.3e-19	58.33	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013507 PE=3 SV=1	[more]
A0A0D2S5T4_GOSRA	3.0e-19	69.12	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G028300 PE=3 SV=1	[more]
D7SLT8_VITVI	8.6e-19	73.53	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g02280 PE=3 SV=...	[more]
A5BWA2_VITVI	8.6e-19	73.53	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024635 PE=3 SV=1	[more]

BLAST of ClCG05G000280 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45040.1	1.3e-18	64.18	Matrixin family protein	[more]
AT4G16640.1	1.0e-15	56.72	Matrixin family protein	[more]
AT1G24140.1	1.5e-14	50.67	Matrixin family protein	[more]
AT1G70170.1	3.3e-14	62.26	matrix metalloproteinase	[more]
AT1G59970.1	3.1e-12	53.85	Matrixin family protein	[more]

BLAST of ClCG05G000280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676675\|ref\|XP_011650638.1\|	2.7e-29	91.78	PREDICTED: metalloendoproteinase 1 [Cucumis sativus]	[more]
gi\|659074776\|ref\|XP_008437790.1\|	1.7e-28	90.41	PREDICTED: metalloendoproteinase 1 [Cucumis melo]	[more]
gi\|147773502\|emb\|CAN66781.1\|	3.2e-19	58.33	hypothetical protein VITISV_013507 [Vitis vinifera]	[more]
gi\|823183227\|ref\|XP_012488777.1\|	4.2e-19	69.12	PREDICTED: metalloendoproteinase 1-like [Gossypium raimondii]	[more]
gi\|225453480\|ref\|XP_002274477.1\|	1.2e-18	73.53	PREDICTED: metalloendoproteinase 1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001818	Pept_M10_metallopeptidase
IPR021190	Pept_M10A
IPR024079	MetalloPept_cat_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008270	zinc ion binding
GO:0008237	metallopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0031012	extracellular matrix

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG05G000280.1	ClCG05G000280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 2..48 score: 1.8
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 35..48 score: 1.7E-11coord: 1..24 score: 1.7
IPR024079	Metallopeptidase, catalytic domain	GENE3D	G3DSA:3.40.390.10		coord: 2..52 score: 9.0
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 2..54 score: 1.7
None	No IPR available	PANTHER	PTHR10201:SF140	F20P5.11 PROTEIN	coord: 2..54 score: 1.7
None	No IPR available	unknown	SSF55486	Metalloproteases ("zincins"), catalytic domain	coord: 2..53 score: 7.59

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG05G000280	Csa3G117950	Cucumber (Chinese Long) v2	cuwcgB222
ClCG05G000280	Cla021094	Watermelon (97103) v1	wcgwmB286
ClCG05G000280	Cla97C05G080250	Watermelon (97103) v2	wcgwmbB229
ClCG05G000280	Bhi01G000431	Wax gourd	wcgwgoB439
ClCG05G000280	CSPI03G07310	Wild cucumber (PI 183967)	cpiwcgB226
ClCG05G000280	Cucsa.259810	Cucumber (Gy14) v1	cgywcgB451
ClCG05G000280	CmaCh06G009640	Cucurbita maxima (Rimu)	cmawcgB738
ClCG05G000280	CmoCh06G009860	Cucurbita moschata (Rifu)	cmowcgB743
ClCG05G000280	Lsi05G022000	Bottle gourd (USVL1VR-Ls)	lsiwcgB335
ClCG05G000280	Cp4.1LG08g00420	Cucurbita pepo (Zucchini)	cpewcgB787
ClCG05G000280	CsGy3G007450	Cucumber (Gy14) v2	cgybwcgB203
ClCG05G000280	MELO3C005965.2	Melon (DHL92) v3.6.1	medwcgB416
ClCG05G000280	Carg24169	Silver-seed gourd	carwcgB0096
ClCG05G000280	CsaV3_3G007430	Cucumber (Chinese Long) v3	cucwcgB225

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG05G000280	Cucurbita maxima (Rimu)	cmawcgB233
ClCG05G000280	Cucurbita moschata (Rifu)	cmowcgB219
ClCG05G000280	Melon (DHL92) v3.5.1	mewcgB427
ClCG05G000280	Cucurbita pepo (Zucchini)	cpewcgB559
ClCG05G000280	Silver-seed gourd	carwcgB0128