Cla97C05G080250 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C05G080250
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	metalloendoproteinase 4-MMP
Location	Cla97Chr05 : 412469 .. 413695 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTTGATAAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTTCGTAACGCATCATTGAAATGGGCCCACGTGATTCCGGTGAGTTTCAGGAGACCGACGACTATGGGTACGCCGATATTAAAATCGGGTTTACAGAGGCGATCACAGCGAGGGGCAGGCGTTCAATGGCGCGTTGGGTGTTTTGGCGCATTCTTTTTCCCTGAGATTGGGATGCGGCGGAGACGTGGGCGATGGCGACGCACGAGAATGGTCATTTGTTGGGGCTGGGTCACAGGTCGGTGAGAGAATCGGTGATGTACCCAAGCTTGAAGCCAAGGGAAAAGAAGGCAAATTTAGAAATGGATGACGTGGAAGGCGTGCAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATGGGAGTCTGATACTTCTGCCAATCAGCCACCTGTTTCCACGTGTACAACAACATGGCCTTTTCCCTCGCCTTCTTTCTAATTTCCACTTACCATTTTATTCTTTTTCCATAAGGATAACAAATTTACACACACATATATATATTCTTGCGGGTGGAAAAAAAAAAAAGCGTTCTATTTAATATTTATACATACATATATACATATGGTTGCGATTTCTTATGTTACATAGAAAACTACAAAACATATTTTAATGTAAAATCGTACATAGTTTAACATACGCATTAAACATGATTTTGAGAGCAGAAGGTATTTAGAGTTTTATATCTTGGGTTTATTTCATGAGCAAATGAAATGCATTAAAGAAGAAGTTGAAGTAATCGAAAAGGCGTTGATTATATAAAATACACAGAGTCATGTAGTTTGTTGATATATAATTTGGAAAAGCGAGATACACATACAGTATTAGATTAAGATCATATATAAGAAAATGAAAATTGAAAAAGTATTTGGTTTGTTCAGCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGGGCCGGAGCTTCTTCTTTGCGTGATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGCAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTATGGGATCCCCCGATTGATCCCCACAGTAGAAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA

mRNA sequence

ATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTTGATAAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTTCGTAACGCATCATTGAAATGGGCCCACGTGATTCCGGTGAGTTTCAGGAGACCGACGACTATGGATTGGGATGCGGCGGAGACGTGGGCGATGGCGACGCACGAGAATGGTCATTTGTTGGGGCTGGGTCACAGGTCGGTGAGAGAATCGGTGATGTACCCAAGCTTGAAGCCAAGGGAAAAGAAGGCAAATTTAGAAATGGATGACGTGGAAGGCGTGCAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATGGGAGTCTGATACTTCTGCCAATCAGCCACCTGTTTCCACGTCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGGGCCGGAGCTTCTTCTTTGCGTGATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGCAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTATGGGATCCCCCGATTGATCCCCACAGTAGAAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA

Coding sequence (CDS)

ATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTTGATAAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTTCGTAACGCATCATTGAAATGGGCCCACGTGATTCCGGTGAGTTTCAGGAGACCGACGACTATGGATTGGGATGCGGCGGAGACGTGGGCGATGGCGACGCACGAGAATGGTCATTTGTTGGGGCTGGGTCACAGGTCGGTGAGAGAATCGGTGATGTACCCAAGCTTGAAGCCAAGGGAAAAGAAGGCAAATTTAGAAATGGATGACGTGGAAGGCGTGCAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATGGGAGTCTGATACTTCTGCCAATCAGCCACCTGTTTCCACGTCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGGGCCGGAGCTTCTTCTTTGCGTGATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGCAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTATGGGATCCCCCGATTGATCCCCACAGTAGAAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA

Protein sequence

MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMDWDAAETWAMATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQPPVSTSQDILEELVAAWSRARGGESGAGASSLRDLILVGGSTGIISRSCRGRAAGYLLASTPIAYLKYGIPRLIPTVEVAAVTEVITKCKF

Homology

[Close]

BLAST of Cla97C05G080250 vs. NCBI nr
Match: XP_008437790.1 (PREDICTED: metalloendoproteinase 4-MMP [Cucumis melo])

HSP 1 Score: 190.7 bits (483), Expect = 5.3e-45
Identity = 110/184 (59.78%), Postives = 114/184 (61.96%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMDW---------- 60
           MPMVLTYAFFKEN +SNLSLKDVRAVFR A  KWAHVIPVSF       +          
Sbjct: 75  MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 134

Query: 61  ----------------------------DAAETWA----------------MATHENGHL 120
                                       DAAETWA                +ATHE GHL
Sbjct: 135 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 194

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQP 131
           LGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESLE ESDTS  QP
Sbjct: 195 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLELESDTSDTQP 254

[Close]

BLAST of Cla97C05G080250 vs. NCBI nr
Match: XP_011650638.1 (PREDICTED: metalloendoproteinase 1 [Cucumis sativus] >KGN56360.1 hypothetical protein Csa_3G117950 [Cucumis sativus])

HSP 1 Score: 190.7 bits (483), Expect = 5.3e-45
Identity = 109/184 (59.24%), Postives = 116/184 (63.04%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMDW---------- 60
           MPMVLTYAFFK+N +SNLSL+DVRAVFR A  KWAHVIPVSF       +          
Sbjct: 64  MPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 123

Query: 61  ----------------------------DAAETWA----------------MATHENGHL 120
                                       DAAETWA                +ATHE GHL
Sbjct: 124 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 183

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQP 131
           LGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESLE ESDTSA+QP
Sbjct: 184 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLELESDTSASQP 243

[Close]

BLAST of Cla97C05G080250 vs. NCBI nr
Match: XP_023539433.1 (metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.2 bits (448), Expect = 6.1e-41
Identity = 103/184 (55.98%), Postives = 109/184 (59.24%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPT-------------- 60
           MPMVLTYAF KEN +SNLSLKDV+ VFR A  KWAHVIPV F                  
Sbjct: 69  MPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRG 128

Query: 61  ------------------------TMDWDAAETWA----------------MATHENGHL 120
                                    +  DAAETWA                +ATHE GHL
Sbjct: 129 DHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEVEKSAVAVDLESVATHEIGHL 188

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQP 131
           LGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNF+FES E ESDTSA   
Sbjct: 189 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESSELESDTSATHA 248

[Close]

BLAST of Cla97C05G080250 vs. NCBI nr
Match: XP_022974263.1 (metalloendoproteinase 4-MMP-like [Cucurbita maxima])

HSP 1 Score: 172.9 bits (437), Expect = 1.2e-39
Identity = 101/177 (57.06%), Postives = 106/177 (59.89%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPT-------------- 60
           MPMVLTYAF KEN ISNLSLKDV+ VFR A  KWAHVIPV F                  
Sbjct: 69  MPMVLTYAFLKENWISNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRG 128

Query: 61  ------------------------TMDWDAAETWA----------------MATHENGHL 120
                                    +  DAAETWA                +ATHE GHL
Sbjct: 129 DHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESVATHEIGHL 188

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSA 124
           LGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNF+FESLE ESDTSA
Sbjct: 189 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFRFESLELESDTSA 245

[Close]

BLAST of Cla97C05G080250 vs. NCBI nr
Match: XP_022944853.1 (metalloendoproteinase 4-MMP-like [Cucurbita moschata])

HSP 1 Score: 155.2 bits (391), Expect = 2.5e-34
Identity = 90/164 (54.88%), Postives = 95/164 (57.93%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPT-------------- 60
           MPMVLTYAFFKEN +SNLSLKDV+ VFR A  KWAHVIPV F                  
Sbjct: 69  MPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFEETEDYGFADIKIGFYRG 128

Query: 61  ------------------------TMDWDAAETWA----------------MATHENGHL 111
                                    +  DAAETWA                +ATHE GHL
Sbjct: 129 DHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKSAVAVDLESVATHEIGHL 188

[Close]

BLAST of Cla97C05G080250 vs. TrEMBL
Match: tr|A0A1S3AUH8|A0A1S3AUH8_CUCME (metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.5e-45
Identity = 110/184 (59.78%), Postives = 114/184 (61.96%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMDW---------- 60
           MPMVLTYAFFKEN +SNLSLKDVRAVFR A  KWAHVIPVSF       +          
Sbjct: 75  MPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 134

Query: 61  ----------------------------DAAETWA----------------MATHENGHL 120
                                       DAAETWA                +ATHE GHL
Sbjct: 135 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 194

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQP 131
           LGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESLE ESDTS  QP
Sbjct: 195 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLELESDTSDTQP 254

[Close]

BLAST of Cla97C05G080250 vs. TrEMBL
Match: tr|A0A0A0L2Y8|A0A0A0L2Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.5e-45
Identity = 109/184 (59.24%), Postives = 116/184 (63.04%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMDW---------- 60
           MPMVLTYAFFK+N +SNLSL+DVRAVFR A  KWAHVIPVSF       +          
Sbjct: 64  MPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRG 123

Query: 61  ----------------------------DAAETWA----------------MATHENGHL 120
                                       DAAETWA                +ATHE GHL
Sbjct: 124 DHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHL 183

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQP 131
           LGLGH SVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESLE ESDTSA+QP
Sbjct: 184 LGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESLELESDTSASQP 243

[Close]

BLAST of Cla97C05G080250 vs. TrEMBL
Match: tr|A0A1S3VCH4|A0A1S3VCH4_VIGRR (metalloendoproteinase 4-MMP-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106773821 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 81/179 (45.25%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPT-------------- 60
           MPM LTYAF +EN+I +LS+KD+R  FR A L+WA VIPVSF                  
Sbjct: 153 MPMTLTYAFSRENMIHSLSMKDIREAFRRAFLRWASVIPVSFAXXXXXXXXXXXXXXXXG 212

Query: 61  ------------------------TMDWDAAETWA----------------MATHENGHL 120
                                    +  DAAETWA                +ATHE GHL
Sbjct: 213 EHGDGEPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEATVSEVAVDLESVATHEIGHL 272

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQ 126
           LGL H SV+E+VMYPSL+PR+K+ANL +DD++GVQ+LYGSNPNF+ E    ESD SAN+
Sbjct: 273 LGLSHSSVKEAVMYPSLRPRDKRANLNIDDIKGVQSLYGSNPNFRSE-WSLESDISANK 330

[Close]

BLAST of Cla97C05G080250 vs. TrEMBL
Match: tr|D7SLT8|D7SLT8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02280 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.1e-29
Identity = 83/179 (46.37%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMDW---------- 60
           +PM LTYAF  ENL+  LSL+D+R  F+ A  +WA VIPVSF    T  +          
Sbjct: 151 IPMTLTYAFSPENLVGYLSLEDIRGAFKLAFARWASVIPVSFSETDTYSFADIKIGFYRG 210

Query: 61  ----------------------------DAAETWA----------------MATHENGHL 120
                                       DAAETWA                +ATHE GHL
Sbjct: 211 DHGDGEPFDGVLGVLAHAFSPESGKFHLDAAETWAVDLESEKSTVAIDLESVATHEIGHL 270

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQ 126
           LGL H  V+ESVMYPSLKPR KKA+L++DD+E VQALYGSNPNFKF S   ESD S+NQ
Sbjct: 271 LGLAHSPVKESVMYPSLKPRAKKADLKLDDIEAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]

BLAST of Cla97C05G080250 vs. TrEMBL
Match: tr|A5BWA2|A5BWA2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_024635 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 2.1e-29
Identity = 83/179 (46.37%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMDW---------- 60
           +PM LTYAF  ENL+  LSL+D+R  F+ A  +WA VIPVSF    T  +          
Sbjct: 151 IPMTLTYAFSPENLVGYLSLEDIRGGFKRAFARWASVIPVSFTETDTYSFADIKIGFYRG 210

Query: 61  ----------------------------DAAETWA----------------MATHENGHL 120
                                       DAAETWA                +ATHE GHL
Sbjct: 211 DHGDGEPFDGVLGVLAHAFSPESGKFHLDAAETWAVDLESEKSTVAIDLESVATHEIGHL 270

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQ 126
           LGL H  V+ESVMYPSLKPR KKA+L++DD+E VQALYGSNPNFKF S   ESD S+NQ
Sbjct: 271 LGLAHSPVKESVMYPSLKPRAKKADLKLDDIEAVQALYGSNPNFKFAS-SMESDISSNQ 328

[Close]

BLAST of Cla97C05G080250 vs. Swiss-Prot
Match: sp|Q8GWW6|4MMP_ARATH (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.9e-25
Identity = 74/178 (41.57%), Postives = 89/178 (50.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPT-------------- 60
           +P+ LTYAF +ENL   L+  D+R VFR A  KWA VIPVSF                  
Sbjct: 138 VPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIADIKIGFFNG 197

Query: 61  ------------------------TMDWDAAETWA----------------MATHENGHL 120
                                    +  D AETWA                +A HE GH+
Sbjct: 198 DHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHV 257

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSAN 125
           LGLGH SV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NPNF   SL   S+TS N
Sbjct: 258 LGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNPNFTLNSL-LASETSTN 314

[Close]

BLAST of Cla97C05G080250 vs. Swiss-Prot
Match: sp|O23507|1MMP_ARATH (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 66/175 (37.71%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 5   LTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRP---TTMD------------ 64
           LTYA  K + +  L+ +DV+ VFR A  +W+ VIPVSF      TT D            
Sbjct: 164 LTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDDFTTADLKIGFYAGDHGD 223

Query: 65  -----------------------WDAAETW-----------------AMATHENGHLLGL 124
                                   DAAETW                 ++ATHE GHLLGL
Sbjct: 224 GLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGL 283

[Close]

BLAST of Cla97C05G080250 vs. Swiss-Prot
Match: sp|Q5XF51|3MMP_ARATH (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-14
Identity = 58/186 (31.18%), Postives = 77/186 (41.40%), Query Frame = 0


Query: 5   LTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRR-------------------- 64
           LTYAF   N ++    ++V++VF  A  +W  V P++F R                    
Sbjct: 175 LTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTFTRVERFSTSDISIGFYSGEHGD 234

Query: 65  ----------------PTT--MDWDAAETW--------------------AMATHENGHL 124
                           P T     D  E W                    ++A HE GHL
Sbjct: 235 GEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHL 294

Query: 125 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQP 133
           LGLGH SV  S+MYP+++   +K +L  DDVEGVQ LYG+NPNF            +  P
Sbjct: 295 LGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGANPNF----------NGSRSP 346

[Close]

BLAST of Cla97C05G080250 vs. Swiss-Prot
Match: sp|O04529|2MMP_ARATH (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-13
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 52  AAETWAMATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNF 111
           A +  ++A HE GHLLGLGH SV ES+MYP++   ++K +L  DDVEG+Q LYG+NPNF
Sbjct: 271 AVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGANPNF 329

[Close]

BLAST of Cla97C05G080250 vs. Swiss-Prot
Match: sp|Q9ZUJ5|5MMP_ARATH (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 50/164 (30.49%), Postives = 71/164 (43.29%), Query Frame = 0


Query: 5   LTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRR-------------------- 64
           LTYAF  +N +++    +V+ VF  A  +WA V P++F R                    
Sbjct: 159 LTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGFFSGEHGD 218

Query: 65  -----------------PTTM-DWDAAETW---------------------AMATHENGH 110
                            PT M   D  E W                     ++A HE GH
Sbjct: 219 GEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVAVHEIGH 278

[Close]

BLAST of Cla97C05G080250 vs. TAIR10
Match: AT2G45040.1 (Matrixin family protein)

HSP 1 Score: 117.5 bits (293), Expect = 1.0e-26
Identity = 74/178 (41.57%), Postives = 89/178 (50.00%), Query Frame = 0


Query: 1   MPMVLTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPT-------------- 60
           +P+ LTYAF +ENL   L+  D+R VFR A  KWA VIPVSF                  
Sbjct: 138 VPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIETEDYVIADIKIGFFNG 197

Query: 61  ------------------------TMDWDAAETWA----------------MATHENGHL 120
                                    +  D AETWA                +A HE GH+
Sbjct: 198 DHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLESVAVHEIGHV 257

Query: 121 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSAN 125
           LGLGH SV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NPNF   SL   S+TS N
Sbjct: 258 LGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNPNFTLNSL-LASETSTN 314

[Close]

BLAST of Cla97C05G080250 vs. TAIR10
Match: AT4G16640.1 (Matrixin family protein)

HSP 1 Score: 101.3 bits (251), Expect = 7.7e-22
Identity = 66/175 (37.71%), Postives = 82/175 (46.86%), Query Frame = 0


Query: 5   LTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRRP---TTMD------------ 64
           LTYA  K + +  L+ +DV+ VFR A  +W+ VIPVSF      TT D            
Sbjct: 164 LTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSFEEVDDFTTADLKIGFYAGDHGD 223

Query: 65  -----------------------WDAAETW-----------------AMATHENGHLLGL 124
                                   DAAETW                 ++ATHE GHLLGL
Sbjct: 224 GLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVDLESVATHEIGHLLGL 283

[Close]

BLAST of Cla97C05G080250 vs. TAIR10
Match: AT1G24140.1 (Matrixin family protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 58/186 (31.18%), Postives = 77/186 (41.40%), Query Frame = 0


Query: 5   LTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRR-------------------- 64
           LTYAF   N ++    ++V++VF  A  +W  V P++F R                    
Sbjct: 175 LTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPLTFTRVERFSTSDISIGFYSGEHGD 234

Query: 65  ----------------PTT--MDWDAAETW--------------------AMATHENGHL 124
                           P T     D  E W                    ++A HE GHL
Sbjct: 235 GEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFISVSEAVDLESVAVHEIGHL 294

Query: 125 LGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLEWESDTSANQP 133
           LGLGH SV  S+MYP+++   +K +L  DDVEGVQ LYG+NPNF            +  P
Sbjct: 295 LGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLYGANPNF----------NGSRSP 346

[Close]

BLAST of Cla97C05G080250 vs. TAIR10
Match: AT1G70170.1 (matrix metalloproteinase)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-14
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 52  AAETWAMATHENGHLLGLGHRSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNF 111
           A +  ++A HE GHLLGLGH SV ES+MYP++   ++K +L  DDVEG+Q LYG+NPNF
Sbjct: 271 AVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYGANPNF 329

[Close]

BLAST of Cla97C05G080250 vs. TAIR10
Match: AT1G59970.1 (Matrixin family protein)

HSP 1 Score: 75.1 bits (183), Expect = 5.9e-14
Identity = 50/164 (30.49%), Postives = 71/164 (43.29%), Query Frame = 0


Query: 5   LTYAFFKENLISNLSLKDVRAVFRNASLKWAHVIPVSFRR-------------------- 64
           LTYAF  +N +++    +V+ VF  A  +WA V P++F R                    
Sbjct: 159 LTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTRSESILRADIVIGFFSGEHGD 218

Query: 65  -----------------PTTM-DWDAAETW---------------------AMATHENGH 110
                            PT M   D  E W                     ++A HE GH
Sbjct: 219 GEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTTVVDLESVAVHEIGH 278

The following BLAST results are available for this feature:

BLAST of Cla97C05G080250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437790.1	5.3e-45	59.78	PREDICTED: metalloendoproteinase 4-MMP [Cucumis melo]	[more]
XP_011650638.1	5.3e-45	59.24	PREDICTED: metalloendoproteinase 1 [Cucumis sativus] >KGN56360.1 hypothetical pr...	[more]
XP_023539433.1	6.1e-41	55.98	metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974263.1	1.2e-39	57.06	metalloendoproteinase 4-MMP-like [Cucurbita maxima]	[more]
XP_022944853.1	2.5e-34	54.88	metalloendoproteinase 4-MMP-like [Cucurbita moschata]	[more]

BLAST of Cla97C05G080250 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AUH8\|A0A1S3AUH8_CUCME	3.5e-45	59.78	metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=3 SV=1	[more]
tr\|A0A0A0L2Y8\|A0A0A0L2Y8_CUCSA	3.5e-45	59.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=3 SV=1	[more]
tr\|A0A1S3VCH4\|A0A1S3VCH4_VIGRR	1.6e-29	45.25	metalloendoproteinase 4-MMP-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106...	[more]
tr\|D7SLT8\|D7SLT8_VITVI	2.1e-29	46.37	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g02280 PE=3 SV=...	[more]
tr\|A5BWA2\|A5BWA2_VITVI	2.1e-29	46.37	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_024635 PE=3 SV=1	[more]

BLAST of Cla97C05G080250 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWW6\|4MMP_ARATH	1.9e-25	41.57	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]
sp\|O23507\|1MMP_ARATH	1.4e-20	37.71	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]
sp\|Q5XF51\|3MMP_ARATH	2.5e-14	31.18	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
sp\|O04529\|2MMP_ARATH	2.2e-13	57.63	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
sp\|Q9ZUJ5\|5MMP_ARATH	1.1e-12	30.49	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]

BLAST of Cla97C05G080250 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45040.1	1.0e-26	41.57	Matrixin family protein	[more]
AT4G16640.1	7.7e-22	37.71	Matrixin family protein	[more]
AT1G24140.1	1.4e-15	31.18	Matrixin family protein	[more]
AT1G70170.1	1.2e-14	57.63	matrix metalloproteinase	[more]
AT1G59970.1	5.9e-14	30.49	Matrixin family protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0031012	extracellular matrix

Vocabulary: **Molecular Function**
Term	Definition
GO:0004222	metalloendopeptidase activity
GO:0008270	zinc ion binding
GO:0008237	metallopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **INTERPRO**
Term	Definition
IPR024079	MetalloPept_cat_dom_sf
IPR001818	Pept_M10_metallopeptidase
IPR006026	Peptidase_Metallo

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0006508	proteolysis
biological_process	GO:0030198	extracellular matrix organization
cellular_component	GO:0031012	extracellular matrix
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008237	metallopeptidase activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C05G080250.1	Cla97C05G080250.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 4..106 e-value: 9.7E-4 score: 7.5
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 56..105 e-value: 9.3E-14 score: 51.5
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	G3DSA:3.40.390.10		coord: 44..111 e-value: 1.1E-16 score: 63.0
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 3..44
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 57..126
None	No IPR available	PANTHER	PTHR10201:SF218	METALLOENDOPROTEINASE 4-MMP	coord: 57..126 coord: 3..44
None	No IPR available	SUPERFAMILY	SSF55486	Metalloproteases ("zincins"), catalytic domain	coord: 5..108

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C05G080250	Cla021094	Watermelon (97103) v1	wmwmbB206
Cla97C05G080250	Csa3G117950	Cucumber (Chinese Long) v2	cuwmbB204
Cla97C05G080250	MELO3C005965	Melon (DHL92) v3.5.1	mewmbB434
Cla97C05G080250	ClCG05G000280	Watermelon (Charleston Gray)	wcgwmbB229
Cla97C05G080250	CSPI03G07310	Wild cucumber (PI 183967)	cpiwmbB209
Cla97C05G080250	Cucsa.259810	Cucumber (Gy14) v1	cgywmbB452
Cla97C05G080250	CmaCh06G009640	Cucurbita maxima (Rimu)	cmawmbB857
Cla97C05G080250	CmoCh06G009860	Cucurbita moschata (Rifu)	cmowmbB833
Cla97C05G080250	Lsi05G022000	Bottle gourd (USVL1VR-Ls)	lsiwmbB333
Cla97C05G080250	CsGy3G007450	Cucumber (Gy14) v2	cgybwmbB196
Cla97C05G080250	MELO3C005965.2	Melon (DHL92) v3.6.1	medwmbB423
Cla97C05G080250	Carg24169	Silver-seed gourd	carwmbB0098
Cla97C05G080250	CsaV3_3G007430	Cucumber (Chinese Long) v3	cucwmbB206
Cla97C05G080250	Bhi01G000431	Wax gourd	wgowmbB191

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C05G080250	Silver-seed gourd	carwmbB0138
Cla97C05G080250	Cucurbita maxima (Rimu)	cmawmbB007
Cla97C05G080250	Cucurbita maxima (Rimu)	cmawmbB263
Cla97C05G080250	Cucurbita moschata (Rifu)	cmowmbB243