Lsi05G021610 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G021610
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUbiquitin-specific protease family C19 protein
Locationchr05 : 28312308 .. 28315276 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGTTTGAGTATGGTAGCACCGAGTAAAGCGGTGGGTTTCAGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGTAAAACACCACCATTACAGCGCCTGCAACCCCATTCCCTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTATTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATTCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAACTTCTCCTCCAAAGCCGCCATACTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGGTATTCCTTCTCTTCAAACCCATTTCCCTTTTTTTCTTTCCTCTAATTTCTTTACGCTTTTCAGCTTCATGGGTTATCAGATTTTCGTAAGTGGGTTGTATTTGCTCTGATGGGTGTGATTTATTTCTGCATATTTTTGTTTCCCTCTTTCAGCAATTGCTATGAGAGGCTACTAAATTCTGCTTTGAAGTGAATGTTGAGGGCCCTTTTCTTATTATTTGTTTTTTGATGTGTTTGTTGAGTAGAGCCGACGTTTTGTAGACTTGATAATTGTTAATATGCTTTTGATATTCTAAGTAGGTTTGCTTAATCCTAAAGTGAGTTTGCCTTTGGATATGATACGAGGCAGGCCGTTTCTTGTGTTTTTTAATGTGTTATTCCAGCTGTGAAATGCTTGCTTGTGACATTTTATATTTTAGGAACTCAAACCTTTGATTTTGGAATGACTTTTTAATTGGTGAAAAGTGTATTTAGCTCATTATAATCACTTTTAAAAAAATTTATAATGTTTGACTAGATATTTCAAAGTCATTTGGCAAATCCTAAAAATACTTTAAGAACGCTTTGAAGATGCTTCTTCCACGAAAGTGTTTATGGGAGAACTGGTTTGTTTAAAAGCATTTTCATGAGAAGTCTCAAACTCAATTTTAGTTATTGGCTTACTACTTCATTGGGGAAAATTGGTTTTGAGCTGTAGTTTCTTGTGAGGACTAACCAACCATCCAGGTGATGAATTGGAAATATAAAGTATTAAAGTAGTTGACTGTATAATTGAACTTATTCCACCATGTAAATGATCTGAACCGTGGTCGGAATTTCTTCCTACATGGGCTTGATGTTACCTGTTTGGGGTTTGATTCATTCTTGTTCTTAAGTACATTCCGGGTGTGTTCGAGGATTGATGTTTTCTGCTTTTTTATATTCAGTTTGCTTCGTGCGGGATGGTCTCCCTGGAATCATCCTATGAAAAGGCTGCTGGGTGTATTTATGCATCTACCTCTTTATATGAACATAGAGGAATGCCTCTGATTTTTCAAAAAATAACTCAACCTTACTGTTGTTGGGGGTTAGTATATAGTGAGGTATGCAAATTCTACTCCCAAGAAACGTTTTATTTCTTTGTTTTATTGTTCTTTTGCAACTATAAAGCAATGGGGGTTTTGTTTCTTCTTCTGACCTATTAAATTTTCTGCATACTTTTTCTTTCCCTCACTCAGTAGGCTAGGTCACTTTATATTGTTTGGTAGCCACTGCATGAAGTGAAAGAAGTGACATTTAGCTCCATTTTTCTTTATAGGTTAATGGTTCCAGTTGTATTCATTATCTTGACACCCTTGTTTGCTCATTTTGAGATTTTTATTTGAGCTGTTTAATGAAGCTGAAGCATGGTTAAAGTTAGATTCTATGTCAAACCAAAAATGTAATTTTGAGTTTTCTTATATCCATCATTGACCTTTTATGGTCTAGAGTTCTTATCTGAAGAATCAAAATTGGGAGGATTAGTATAAGATTTTCAAACTAACTTGCTGCTGTTCTTTCTCCAAAAGCCCTTGGTATCATACTGCTCAAAGAAATATATAAAGTTGAAAAATTATATTCAATCTTTATTATTTTAAAGAATATTATAGAAGATAACTTGTACTGCTAAGCTTATGCATCAATGATATACCTTAATATCATTTTTCTTTTTAGACATCTAACATGAGGTAGGAATATCTGTCTATTCCCATCTGGAAATCTAGACAGATTGCACCTGTTAGTTTCCAACATGGGTATGCATTATAGATTTTTAACATGGCATGCTCGTATTTCTACCTGGCAGAGGTTCTCCACTGACTTCTACATAACTGATAGAAAAACTGGTGTTAGAGCAATGGTAAGGGCCGGCCCTGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGGTAACCGCTTATCGTGATAACACCTATTTGTTTGACTACGCTTTGGCCATAATTTTAGTAGCTAATTCCATGTAATTTTAGCAGATATGTTCAGGAAGGCAGCTATGTCTCTGTAATGGGAATGTTGCATAAGAATAACGGTCATCTAACGATAGTTCAACCTCCAGATGTAATCTCTACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTCTCACAGAAGACTGGCCCTTCGCTCGGTCAGGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGTTTGAACAGTATGTTGTAGATGGAAATTTTAGATGAGAGGCTAAGTCCATTAGAATTCCTAACCTTGTGCTTATCATGAGTAACTTTAGGCTTCTTTTAGTTCATCCATCTCTGCCCCTTTAGTTTCCAGAGTTACATTTGTTCATGTCCATAGGTTTCTGTTAACTACAAATTCTACTTGAATGTACATTGATTAATTTTATTGAAATCAACCATCAGTGCTTTAATCAGCT

mRNA sequence

ATGAGCCGTTTGAGTATGGTAGCACCGAGTAAAGCGGTGGGTTTCAGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGTAAAACACCACCATTACAGCGCCTGCAACCCCATTCCCTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTATTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATTCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAACTTCTCCTCCAAAGCCGCCATACTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGAGGTTCTCCACTGACTTCTACATAACTGATAGAAAAACTGGTGTTAGAGCAATGGTAAGGGCCGGCCCTGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAGGAAGGCAGCTATGTCTCTGTAATGGGAATGTTGCATAAGAATAACGGTCATCTAACGATAGTTCAACCTCCAGATGTAATCTCTACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTCTCACAGAAGACTGGCCCTTCGCTCGGTCAGGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGTTTGAACAGTATGTTGTAGATGGAAATTTTAGATGAGAGGCTAAGTCCATTAGAATTCCTAACCTTGTGCTTATCATGAGTAACTTTAGGCTTCTTTTAGTTCATCCATCTCTGCCCCTTTAGTTTCCAGAGTTACATTTGTTCATGTCCATAGGTTTCTGTTAACTACAAATTCTACTTGAATGTACATTGATTAATTTTATTGAAATCAACCATCAGTGCTTTAATCAGCT

Coding sequence (CDS)

ATGAGCCGTTTGAGTATGGTAGCACCGAGTAAAGCGGTGGGTTTCAGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGTAAAACACCACCATTACAGCGCCTGCAACCCCATTCCCTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTATTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATTCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAACTTCTCCTCCAAAGCCGCCATACTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGAGGTTCTCCACTGACTTCTACATAACTGATAGAAAAACTGGTGTTAGAGCAATGGTAAGGGCCGGCCCTGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAGGAAGGCAGCTATGTCTCTGTAATGGGAATGTTGCATAAGAATAACGGTCATCTAACGATAGTTCAACCTCCAGATGTAATCTCTACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTCTCACAGAAGACTGGCCCTTCGCTCGGTCAGGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGA

Protein sequence

MSRLSMVAPSKAVGFSERKREERVMSDLSIAAPTVKHHHYSACNPIPSAALYILIPLFILGFSVSIFVLIVVHNAFFFLSLLLLFIFLSAFALWNNLNFSSKAAILSFLHSFPDSDLTLAREGQLVKITGRFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQKTGPSLGQGSLCHQEQFADI
BLAST of Lsi05G021610 vs. Swiss-Prot
Match: Y1686_ARATH (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.6e-21
Identity = 45/121 (37.19%), Postives = 84/121 (69.42%), Query Frame = 1

Query: 131 RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNIS 190
           R   DFYI+D ++G+RA+V+ G G+K+ PL+ +S +++  +  + +SP   +WL  +N++
Sbjct: 341 RHVVDFYISDFQSGLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLT 400

Query: 191 TEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVV 250
           ++ R++RL+EGY++EGS VSV+G++ +N+  L IV   + ++ G  WR+   P  ++G+V
Sbjct: 401 SDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIV 460

Query: 251 L 252
           L
Sbjct: 461 L 461

BLAST of Lsi05G021610 vs. TrEMBL
Match: A0A0A0L8G1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119250 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.7e-84
Identity = 189/305 (61.97%), Postives = 209/305 (68.52%), Query Frame = 1

Query: 25  MSDLS-IAAPTVKH-HHYSACNPIPSAALYILIPLFILGFSVSIFVLIVVHNAFFFLS-- 84
           MS+LS I APT KH HHYSACNPIPS ALYILIPLFILGFSVSIFVL+VVHNAFFF+S  
Sbjct: 1   MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60

Query: 85  ---------------------LLLLFIF-----------------LSAFALWNNLNFSSK 144
                                 +L F+                  +S FA    ++  S 
Sbjct: 61  FLSIFLSAFALWNSLNFSSKTAILSFLHSLPDSDLTLAQEGQLVKISGFASCGTVSLESS 120

Query: 145 ----------AAILSFLHSFPD--SDLTLAREGQLVKITGRFSTDFYITDRKTGVRAMVR 204
                     +  L      P     +T    G  +  + RFSTDFYITDRKTG+RAMVR
Sbjct: 121 YEKATGCVYASTSLYEYRGMPMIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180

Query: 205 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGSYVS 264
           AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLR++NISTEAR+LRLEEGYVQEGS+VS
Sbjct: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARILRLEEGYVQEGSFVS 240

Query: 265 VMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQKTGPSLGQGSLCHQE 276
           V GMLH+NNG +TIVQPPDVISTGCVWRK LLPIYIDG+VLGVSQ TGP LG GSL H E
Sbjct: 241 VFGMLHRNNGQITIVQPPDVISTGCVWRKFLLPIYIDGLVLGVSQATGPLLGPGSLYHHE 300

BLAST of Lsi05G021610 vs. TrEMBL
Match: W9RNW8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023455 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65
Identity = 147/280 (52.50%), Postives = 187/280 (66.79%), Query Frame = 1

Query: 25  MSDLSIAAPTVKHHHYSACNPIPSAALYILIPLFILGFSVSIFVLIVVHNAFFFLSLLLL 84
           M+DLS      K+    +C PIPS ALYILIPLF +G S+SIF+L+VV NA FFL  L L
Sbjct: 1   MNDLSNGVLVEKNT--CSCKPIPSLALYILIPLFFVGLSLSIFLLVVVRNAAFFLFFLFL 60

Query: 85  FIFLSAFALWNNLNFSSKAAILSFLHSFPDSDLTLAREGQLVKITG-------------- 144
              + AF LWN  N ++KAAIL FL S P SDL  A EG+LVKITG              
Sbjct: 61  SSLVLAFILWNTRNSTAKAAILFFLRSLPHSDLRHAPEGRLVKITGFASCGSVSLESSYE 120

Query: 145 ------------------------RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKL 204
                                   RFSTDFYITD+K+G+RA V+AG G +++PL++ES+L
Sbjct: 121 KAARCIYSSTLLYEYGGLDLKPVKRFSTDFYITDKKSGLRATVKAGSGCRVIPLVVESQL 180

Query: 205 VNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQ 264
           VNTTR  +ILSP LRKWLR+RN+S E R+LRLEEGYVQEGS V+V+G++ +NN   TIVQ
Sbjct: 181 VNTTRQCRILSPPLRKWLRERNLSDEPRLLRLEEGYVQEGSTVTVVGIVRRNNETTTIVQ 240

Query: 265 PPDVISTGCVWRKLLLPIYIDGVVLGVSQKTGPSLGQGSL 267
           PP+V+STGC+W+KLLLP+ IDG++L VS+    S+ Q S+
Sbjct: 241 PPEVLSTGCLWQKLLLPVDIDGLILSVSRMAVHSINQDSV 278

BLAST of Lsi05G021610 vs. TrEMBL
Match: B9SVE0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129790 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.1e-56
Identity = 108/171 (63.16%), Postives = 140/171 (81.87%), Query Frame = 1

Query: 88  LSAFALWNNLNFSSKAAILSFLHSFPDSDLTLAREGQLVKITGRFSTDFYITDRKTGVRA 147
           ++ F L + LN+  KAAI  FL SFPDSDL  +R GQLVKITG FSTDFY+TDRK+G+RA
Sbjct: 23  IAIFVLLSLLNWKYKAAIFLFLRSFPDSDLASSRHGQLVKITGSFSTDFYVTDRKSGIRA 82

Query: 148 MVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGS 207
           +V+AGPG K+VPLI+E+KLV T R  ++LS  LRKWL++RN+S E R+LRLEEGYVQEGS
Sbjct: 83  IVKAGPGCKVVPLIVENKLVTTARQCRMLSLHLRKWLQERNLSVEPRLLRLEEGYVQEGS 142

Query: 208 YVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQKTG 259
           +V+V+G L KNN  +TI+QP +++STGC+W+KLLLP+ +DG+VLGVS   G
Sbjct: 143 FVTVIGQLIKNNDTMTIIQPQELLSTGCLWKKLLLPVDVDGLVLGVSNMAG 193

BLAST of Lsi05G021610 vs. TrEMBL
Match: A0A061E034_THECC (Ubiquitin-specific protease family C19-related protein isoform 1 OS=Theobroma cacao GN=TCM_005077 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 8.4e-46
Identity = 91/141 (64.54%), Postives = 118/141 (83.69%), Query Frame = 1

Query: 131 RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNIS 190
           RFSTDFYITD+K+GVRA+V+AG G +++PLIIES+LVNTT+  + LSP L  WLRD+N+S
Sbjct: 186 RFSTDFYITDQKSGVRAVVKAGSGCEVMPLIIESELVNTTKQCRTLSPHLSNWLRDKNLS 245

Query: 191 TEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVV 250
            EAR+LRLEEGYVQEGS VS++GMLHK+N  L IVQPP++ISTGC+WR+LLLP+ +DG++
Sbjct: 246 AEARLLRLEEGYVQEGSTVSIIGMLHKSNDILMIVQPPEIISTGCLWRRLLLPVDVDGLI 305

Query: 251 LGVSQKTGPSLGQGSLCHQEQ 272
           LG+   T P+L   S+ H EQ
Sbjct: 306 LGIPD-TKPTLDLNSIQHPEQ 325

BLAST of Lsi05G021610 vs. TrEMBL
Match: A0A067JX28_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14208 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.4e-45
Identity = 89/141 (63.12%), Postives = 116/141 (82.27%), Query Frame = 1

Query: 131 RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNIS 190
           R+STDFYITDRK+G+RA+V+AGPG K+VPLI+ESKLV TTR  +ILSP LRKWL+DRN+S
Sbjct: 157 RYSTDFYITDRKSGIRALVKAGPGCKVVPLIVESKLVATTRQCRILSPHLRKWLQDRNLS 216

Query: 191 TEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVV 250
            EAR+LRLEEGY+Q GS V+V+G+LH+N+  L IVQP +++STGC+W KL+LPI IDG+V
Sbjct: 217 VEARLLRLEEGYIQGGSIVTVIGVLHRNDDILMIVQPQELLSTGCLWTKLILPIDIDGLV 276

Query: 251 LGVSQKTGPSLGQGSLCHQEQ 272
           +G+S  +GP        H +Q
Sbjct: 277 VGLSNLSGPISNPDFRQHTQQ 297

BLAST of Lsi05G021610 vs. TAIR10
Match: AT4G22290.1 (AT4G22290.1 Ubiquitin-specific protease family C19-related protein)

HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29
Identity = 57/121 (47.11%), Postives = 87/121 (71.90%), Query Frame = 1

Query: 131 RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNIS 190
           ++ +DFYI+D ++G+RA+V+AG GSK+ P +  + + N T   K LSPS  KWL DRN+S
Sbjct: 312 KYVSDFYISDFQSGLRALVKAGYGSKVSPFVKPATVANVTTQNKDLSPSFLKWLSDRNLS 371

Query: 191 TEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVV 250
            + R++RL+EGY++EGS VSVMGM+ +++  L IV P + +S+GC W   L P Y DG++
Sbjct: 372 ADDRVMRLKEGYIKEGSTVSVMGMVRRHDNVLMIVPPAEAVSSGCRWWHCLFPTYADGLI 431

Query: 251 L 252
           +
Sbjct: 432 I 432

BLAST of Lsi05G021610 vs. TAIR10
Match: AT1G16860.1 (AT1G16860.1 Ubiquitin-specific protease family C19-related protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22
Identity = 45/121 (37.19%), Postives = 84/121 (69.42%), Query Frame = 1

Query: 131 RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNIS 190
           R   DFYI+D ++G+RA+V+ G G+K+ PL+ +S +++  +  + +SP   +WL  +N++
Sbjct: 341 RHVVDFYISDFQSGLRALVKTGSGAKVTPLVDDSVVIDFKQGSEQVSPDFVRWLGKKNLT 400

Query: 191 TEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVV 250
           ++ R++RL+EGY++EGS VSV+G++ +N+  L IV   + ++ G  WR+   P  ++G+V
Sbjct: 401 SDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPSSEPLAAGWQWRRCTFPTSLEGIV 460

Query: 251 L 252
           L
Sbjct: 461 L 461

BLAST of Lsi05G021610 vs. TAIR10
Match: AT1G78880.1 (AT1G78880.1 Ubiquitin-specific protease family C19-related protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-21
Identity = 45/121 (37.19%), Postives = 80/121 (66.12%), Query Frame = 1

Query: 131 RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNIS 190
           R   DFYI+D ++G+RA+V+ G G+K+ PL+ +S +++     +  SP   +WL  +N++
Sbjct: 335 RHVVDFYISDFQSGLRALVKTGNGAKVTPLVDDSVVIDFKPGNEQASPDFVRWLGKKNLT 394

Query: 191 TEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVV 250
            + R++RL+EGY++EGS VSV+G++ +N+  L IV   + ++ G  W K   P  ++G+V
Sbjct: 395 NDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPTTEPLAAGWQWSKCTFPASLEGIV 454

Query: 251 L 252
           L
Sbjct: 455 L 455

BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|449432010|ref|XP_004133793.1| (PREDICTED: uncharacterized membrane protein At1g16860 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.1e-83
Identity = 189/305 (61.97%), Postives = 209/305 (68.52%), Query Frame = 1

Query: 25  MSDLS-IAAPTVKH-HHYSACNPIPSAALYILIPLFILGFSVSIFVLIVVHNAFFFLS-- 84
           MS+LS I APT KH HHYSACNPIPS ALYILIPLFILGFSVSIFVL+VVHNAFFF+S  
Sbjct: 1   MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60

Query: 85  ---------------------LLLLFIF-----------------LSAFALWNNLNFSSK 144
                                 +L F+                  +S FA    ++  S 
Sbjct: 61  FLSIFLSAFALWNSLNFSSKTAILSFLHSLPDSDLTLAQEGQLVKISGFASCGTVSLESS 120

Query: 145 ----------AAILSFLHSFPD--SDLTLAREGQLVKITGRFSTDFYITDRKTGVRAMVR 204
                     +  L      P     +T    G  +  + RFSTDFYITDRKTG+RAMVR
Sbjct: 121 YEKATGCVYASTSLYEYRGMPMIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180

Query: 205 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGSYVS 264
           AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLR++NISTEAR+LRLEEGYVQEGS+VS
Sbjct: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARILRLEEGYVQEGSFVS 240

Query: 265 VMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQKTGPSLGQGSLCHQE 276
           V GMLH+NNG +TIVQPPDVISTGCVWRK LLPIYIDG+VLGVSQ TGP LG GSL H E
Sbjct: 241 VFGMLHRNNGQITIVQPPDVISTGCVWRKFLLPIYIDGLVLGVSQATGPLLGPGSLYHHE 300

BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|659074877|ref|XP_008437844.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo])

HSP 1 Score: 280.4 bits (716), Expect = 3.4e-72
Identity = 135/145 (93.10%), Postives = 142/145 (97.93%), Query Frame = 1

Query: 131 RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNIS 190
           RFSTDFYITDRKTG+RAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLR++NIS
Sbjct: 161 RFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNIS 220

Query: 191 TEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVV 250
           TEARMLRLEEGYVQEGS+VSV+GMLH+NNG +TIVQPPDVISTGCVWRKLLLPIYIDGVV
Sbjct: 221 TEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVV 280

Query: 251 LGVSQKTGPSLGQGSLCHQEQFADI 276
           LGVSQ TGPSLG GSLCHQEQFADI
Sbjct: 281 LGVSQTTGPSLGPGSLCHQEQFADI 305

BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|719964087|ref|XP_010251634.1| (PREDICTED: uncharacterized membrane protein At1g16860-like isoform X3 [Nelumbo nucifera])

HSP 1 Score: 273.1 bits (697), Expect = 5.4e-70
Identity = 140/237 (59.07%), Postives = 181/237 (76.37%), Query Frame = 1

Query: 25  MSDLSIAAPTVKHHHYSACNPIPSAALYILIPLFILGFSVSIFVLIVVHNAFFFLSLLLL 84
           M+DLS A    +  H  +C PIP+  + +LIPLF +G +VSIF+L+VVHNAFFF+SLLLL
Sbjct: 1   MNDLSNALR--ERRHCCSCRPIPTPVVCLLIPLFFIGIAVSIFILVVVHNAFFFVSLLLL 60

Query: 85  FIFLSAFALWNNLNFSSKAAILSFLHSFPDSDLTLAREGQLVKITGRFSTDFYITDRKTG 144
              + AF +WN LN+    AIL FL SFPDSDL  A  GQLVKITGRFSTDFYITD K+G
Sbjct: 61  SAAVLAFLVWNTLNWRRNGAILLFLDSFPDSDLRTATHGQLVKITGRFSTDFYITDMKSG 120

Query: 145 VRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQ 204
           +R MV+AG GSK++PLI+ES LVNTT   ++LS  LRKWL +RN+S EAR+L LEEGY++
Sbjct: 121 IRVMVKAGYGSKVIPLIVESTLVNTTNKHRVLSSYLRKWLVERNLSAEARLLHLEEGYIK 180

Query: 205 EGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQKTGPSL 262
           EGS V+VMG+LHKN+    IVQPP+++STGC+WR  LLP+ ++G++L VS+ +   L
Sbjct: 181 EGSSVTVMGVLHKNSDITMIVQPPEIVSTGCLWRGFLLPVDVNGLILRVSETSSSPL 235

BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|703114546|ref|XP_010100686.1| (hypothetical protein L484_023455 [Morus notabilis])

HSP 1 Score: 257.7 bits (657), Expect = 2.3e-65
Identity = 147/280 (52.50%), Postives = 187/280 (66.79%), Query Frame = 1

Query: 25  MSDLSIAAPTVKHHHYSACNPIPSAALYILIPLFILGFSVSIFVLIVVHNAFFFLSLLLL 84
           M+DLS      K+    +C PIPS ALYILIPLF +G S+SIF+L+VV NA FFL  L L
Sbjct: 1   MNDLSNGVLVEKNT--CSCKPIPSLALYILIPLFFVGLSLSIFLLVVVRNAAFFLFFLFL 60

Query: 85  FIFLSAFALWNNLNFSSKAAILSFLHSFPDSDLTLAREGQLVKITG-------------- 144
              + AF LWN  N ++KAAIL FL S P SDL  A EG+LVKITG              
Sbjct: 61  SSLVLAFILWNTRNSTAKAAILFFLRSLPHSDLRHAPEGRLVKITGFASCGSVSLESSYE 120

Query: 145 ------------------------RFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKL 204
                                   RFSTDFYITD+K+G+RA V+AG G +++PL++ES+L
Sbjct: 121 KAARCIYSSTLLYEYGGLDLKPVKRFSTDFYITDKKSGLRATVKAGSGCRVIPLVVESQL 180

Query: 205 VNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQ 264
           VNTTR  +ILSP LRKWLR+RN+S E R+LRLEEGYVQEGS V+V+G++ +NN   TIVQ
Sbjct: 181 VNTTRQCRILSPPLRKWLRERNLSDEPRLLRLEEGYVQEGSTVTVVGIVRRNNETTTIVQ 240

Query: 265 PPDVISTGCVWRKLLLPIYIDGVVLGVSQKTGPSLGQGSL 267
           PP+V+STGC+W+KLLLP+ IDG++L VS+    S+ Q S+
Sbjct: 241 PPEVLSTGCLWQKLLLPVDIDGLILSVSRMAVHSINQDSV 278

BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|223530521|gb|EEF32402.1| (hypothetical protein RCOM_0129790 [Ricinus communis])

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56
Identity = 108/171 (63.16%), Postives = 140/171 (81.87%), Query Frame = 1

Query: 88  LSAFALWNNLNFSSKAAILSFLHSFPDSDLTLAREGQLVKITGRFSTDFYITDRKTGVRA 147
           ++ F L + LN+  KAAI  FL SFPDSDL  +R GQLVKITG FSTDFY+TDRK+G+RA
Sbjct: 23  IAIFVLLSLLNWKYKAAIFLFLRSFPDSDLASSRHGQLVKITGSFSTDFYVTDRKSGIRA 82

Query: 148 MVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGS 207
           +V+AGPG K+VPLI+E+KLV T R  ++LS  LRKWL++RN+S E R+LRLEEGYVQEGS
Sbjct: 83  IVKAGPGCKVVPLIVENKLVTTARQCRMLSLHLRKWLQERNLSVEPRLLRLEEGYVQEGS 142

Query: 208 YVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQKTG 259
           +V+V+G L KNN  +TI+QP +++STGC+W+KLLLP+ +DG+VLGVS   G
Sbjct: 143 FVTVIGQLIKNNDTMTIIQPQELLSTGCLWKKLLLPVDVDGLVLGVSNMAG 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Y1686_ARATH4.6e-2137.19Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 ... [more]
Match NameE-valueIdentityDescription
A0A0A0L8G1_CUCSA7.7e-8461.97Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119250 PE=4 SV=1[more]
W9RNW8_9ROSA1.6e-6552.50Uncharacterized protein OS=Morus notabilis GN=L484_023455 PE=4 SV=1[more]
B9SVE0_RICCO3.1e-5663.16Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129790 PE=4 SV=1[more]
A0A061E034_THECC8.4e-4664.54Ubiquitin-specific protease family C19-related protein isoform 1 OS=Theobroma ca... [more]
A0A067JX28_JATCU5.4e-4563.12Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14208 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G22290.11.7e-2947.11 Ubiquitin-specific protease family C19-related protein[more]
AT1G16860.12.6e-2237.19 Ubiquitin-specific protease family C19-related protein[more]
AT1G78880.12.9e-2137.19 Ubiquitin-specific protease family C19-related protein[more]
Match NameE-valueIdentityDescription
gi|449432010|ref|XP_004133793.1|1.1e-8361.97PREDICTED: uncharacterized membrane protein At1g16860 [Cucumis sativus][more]
gi|659074877|ref|XP_008437844.1|3.4e-7293.10PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo][more]
gi|719964087|ref|XP_010251634.1|5.4e-7059.07PREDICTED: uncharacterized membrane protein At1g16860-like isoform X3 [Nelumbo n... [more]
gi|703114546|ref|XP_010100686.1|2.3e-6552.50hypothetical protein L484_023455 [Morus notabilis][more]
gi|223530521|gb|EEF32402.1|4.4e-5663.16hypothetical protein RCOM_0129790 [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G021610.1Lsi05G021610.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33709FAMILY NOT NAMEDcoord: 17..264
score: 6.5E
NoneNo IPR availablePANTHERPTHR33709:SF1SUBFAMILY NOT NAMEDcoord: 17..264
score: 6.5E

The following gene(s) are paralogous to this gene:

None