Lsi05G021610 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCGTTTGAGTATGGTAGCACCGAGTAAAGCGGTGGGTTTCAGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGTAAAACACCACCATTACAGCGCCTGCAACCCCATTCCCTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTATTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATTCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAACTTCTCCTCCAAAGCCGCCATACTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGGTATTCCTTCTCTTCAAACCCATTTCCCTTTTTTTCTTTCCTCTAATTTCTTTACGCTTTTCAGCTTCATGGGTTATCAGATTTTCGTAAGTGGGTTGTATTTGCTCTGATGGGTGTGATTTATTTCTGCATATTTTTGTTTCCCTCTTTCAGCAATTGCTATGAGAGGCTACTAAATTCTGCTTTGAAGTGAATGTTGAGGGCCCTTTTCTTATTATTTGTTTTTTGATGTGTTTGTTGAGTAGAGCCGACGTTTTGTAGACTTGATAATTGTTAATATGCTTTTGATATTCTAAGTAGGTTTGCTTAATCCTAAAGTGAGTTTGCCTTTGGATATGATACGAGGCAGGCCGTTTCTTGTGTTTTTTAATGTGTTATTCCAGCTGTGAAATGCTTGCTTGTGACATTTTATATTTTAGGAACTCAAACCTTTGATTTTGGAATGACTTTTTAATTGGTGAAAAGTGTATTTAGCTCATTATAATCACTTTTAAAAAAATTTATAATGTTTGACTAGATATTTCAAAGTCATTTGGCAAATCCTAAAAATACTTTAAGAACGCTTTGAAGATGCTTCTTCCACGAAAGTGTTTATGGGAGAACTGGTTTGTTTAAAAGCATTTTCATGAGAAGTCTCAAACTCAATTTTAGTTATTGGCTTACTACTTCATTGGGGAAAATTGGTTTTGAGCTGTAGTTTCTTGTGAGGACTAACCAACCATCCAGGTGATGAATTGGAAATATAAAGTATTAAAGTAGTTGACTGTATAATTGAACTTATTCCACCATGTAAATGATCTGAACCGTGGTCGGAATTTCTTCCTACATGGGCTTGATGTTACCTGTTTGGGGTTTGATTCATTCTTGTTCTTAAGTACATTCCGGGTGTGTTCGAGGATTGATGTTTTCTGCTTTTTTATATTCAGTTTGCTTCGTGCGGGATGGTCTCCCTGGAATCATCCTATGAAAAGGCTGCTGGGTGTATTTATGCATCTACCTCTTTATATGAACATAGAGGAATGCCTCTGATTTTTCAAAAAATAACTCAACCTTACTGTTGTTGGGGGTTAGTATATAGTGAGGTATGCAAATTCTACTCCCAAGAAACGTTTTATTTCTTTGTTTTATTGTTCTTTTGCAACTATAAAGCAATGGGGGTTTTGTTTCTTCTTCTGACCTATTAAATTTTCTGCATACTTTTTCTTTCCCTCACTCAGTAGGCTAGGTCACTTTATATTGTTTGGTAGCCACTGCATGAAGTGAAAGAAGTGACATTTAGCTCCATTTTTCTTTATAGGTTAATGGTTCCAGTTGTATTCATTATCTTGACACCCTTGTTTGCTCATTTTGAGATTTTTATTTGAGCTGTTTAATGAAGCTGAAGCATGGTTAAAGTTAGATTCTATGTCAAACCAAAAATGTAATTTTGAGTTTTCTTATATCCATCATTGACCTTTTATGGTCTAGAGTTCTTATCTGAAGAATCAAAATTGGGAGGATTAGTATAAGATTTTCAAACTAACTTGCTGCTGTTCTTTCTCCAAAAGCCCTTGGTATCATACTGCTCAAAGAAATATATAAAGTTGAAAAATTATATTCAATCTTTATTATTTTAAAGAATATTATAGAAGATAACTTGTACTGCTAAGCTTATGCATCAATGATATACCTTAATATCATTTTTCTTTTTAGACATCTAACATGAGGTAGGAATATCTGTCTATTCCCATCTGGAAATCTAGACAGATTGCACCTGTTAGTTTCCAACATGGGTATGCATTATAGATTTTTAACATGGCATGCTCGTATTTCTACCTGGCAGAGGTTCTCCACTGACTTCTACATAACTGATAGAAAAACTGGTGTTAGAGCAATGGTAAGGGCCGGCCCTGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGGTAACCGCTTATCGTGATAACACCTATTTGTTTGACTACGCTTTGGCCATAATTTTAGTAGCTAATTCCATGTAATTTTAGCAGATATGTTCAGGAAGGCAGCTATGTCTCTGTAATGGGAATGTTGCATAAGAATAACGGTCATCTAACGATAGTTCAACCTCCAGATGTAATCTCTACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTCTCACAGAAGACTGGCCCTTCGCTCGGTCAGGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGTTTGAACAGTATGTTGTAGATGGAAATTTTAGATGAGAGGCTAAGTCCATTAGAATTCCTAACCTTGTGCTTATCATGAGTAACTTTAGGCTTCTTTTAGTTCATCCATCTCTGCCCCTTTAGTTTCCAGAGTTACATTTGTTCATGTCCATAGGTTTCTGTTAACTACAAATTCTACTTGAATGTACATTGATTAATTTTATTGAAATCAACCATCAGTGCTTTAATCAGCT ATGAGCCGTTTGAGTATGGTAGCACCGAGTAAAGCGGTGGGTTTCAGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGTAAAACACCACCATTACAGCGCCTGCAACCCCATTCCCTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTATTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATTCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAACTTCTCCTCCAAAGCCGCCATACTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGAGGTTCTCCACTGACTTCTACATAACTGATAGAAAAACTGGTGTTAGAGCAATGGTAAGGGCCGGCCCTGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAGGAAGGCAGCTATGTCTCTGTAATGGGAATGTTGCATAAGAATAACGGTCATCTAACGATAGTTCAACCTCCAGATGTAATCTCTACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTCTCACAGAAGACTGGCCCTTCGCTCGGTCAGGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGTTTGAACAGTATGTTGTAGATGGAAATTTTAGATGAGAGGCTAAGTCCATTAGAATTCCTAACCTTGTGCTTATCATGAGTAACTTTAGGCTTCTTTTAGTTCATCCATCTCTGCCCCTTTAGTTTCCAGAGTTACATTTGTTCATGTCCATAGGTTTCTGTTAACTACAAATTCTACTTGAATGTACATTGATTAATTTTATTGAAATCAACCATCAGTGCTTTAATCAGCT ATGAGCCGTTTGAGTATGGTAGCACCGAGTAAAGCGGTGGGTTTCAGTGAGAGAAAGAGAGAGGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTCCAACTGTAAAACACCACCATTACAGCGCCTGCAACCCCATTCCCTCTGCTGCTCTTTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTTATTGTAGTTCACAACGCCTTCTTCTTCCTCTCTCTTCTCCTTCTATTCATCTTCCTCTCTGCTTTCGCCCTCTGGAATAACCTCAACTTCTCCTCCAAAGCCGCCATACTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCTCGCGAAGGTCAACTCGTTAAGATTACAGGGAGGTTCTCCACTGACTTCTACATAACTGATAGAAAAACTGGTGTTAGAGCAATGGTAAGGGCCGGCCCTGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGCAAGATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGACAGAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAGGAAGGCAGCTATGTCTCTGTAATGGGAATGTTGCATAAGAATAACGGTCATCTAACGATAGTTCAACCTCCAGATGTAATCTCTACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTCTCACAGAAGACTGGCCCTTCGCTCGGTCAGGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGA MSRLSMVAPSKAVGFSERKREERVMSDLSIAAPTVKHHHYSACNPIPSAALYILIPLFILGFSVSIFVLIVVHNAFFFLSLLLLFIFLSAFALWNNLNFSSKAAILSFLHSFPDSDLTLAREGQLVKITGRFSTDFYITDRKTGVRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLRDRNISTEARMLRLEEGYVQEGSYVSVMGMLHKNNGHLTIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQKTGPSLGQGSLCHQEQFADI
BLAST of Lsi05G021610 vs. Swiss-Prot
Match: Y1686_ARATH (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.6e-21 Identity = 45/121 (37.19%), Postives = 84/121 (69.42%), Query Frame = 1
BLAST of Lsi05G021610 vs. TrEMBL
Match: A0A0A0L8G1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119250 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 7.7e-84 Identity = 189/305 (61.97%), Postives = 209/305 (68.52%), Query Frame = 1
BLAST of Lsi05G021610 vs. TrEMBL
Match: W9RNW8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023455 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65 Identity = 147/280 (52.50%), Postives = 187/280 (66.79%), Query Frame = 1
BLAST of Lsi05G021610 vs. TrEMBL
Match: B9SVE0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129790 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 3.1e-56 Identity = 108/171 (63.16%), Postives = 140/171 (81.87%), Query Frame = 1
BLAST of Lsi05G021610 vs. TrEMBL
Match: A0A061E034_THECC (Ubiquitin-specific protease family C19-related protein isoform 1 OS=Theobroma cacao GN=TCM_005077 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 8.4e-46 Identity = 91/141 (64.54%), Postives = 118/141 (83.69%), Query Frame = 1
BLAST of Lsi05G021610 vs. TrEMBL
Match: A0A067JX28_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14208 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 5.4e-45 Identity = 89/141 (63.12%), Postives = 116/141 (82.27%), Query Frame = 1
BLAST of Lsi05G021610 vs. TAIR10
Match: AT4G22290.1 (AT4G22290.1 Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 127.1 bits (318), Expect = 1.7e-29 Identity = 57/121 (47.11%), Postives = 87/121 (71.90%), Query Frame = 1
BLAST of Lsi05G021610 vs. TAIR10
Match: AT1G16860.1 (AT1G16860.1 Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 103.2 bits (256), Expect = 2.6e-22 Identity = 45/121 (37.19%), Postives = 84/121 (69.42%), Query Frame = 1
BLAST of Lsi05G021610 vs. TAIR10
Match: AT1G78880.1 (AT1G78880.1 Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 99.8 bits (247), Expect = 2.9e-21 Identity = 45/121 (37.19%), Postives = 80/121 (66.12%), Query Frame = 1
BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|449432010|ref|XP_004133793.1| (PREDICTED: uncharacterized membrane protein At1g16860 [Cucumis sativus]) HSP 1 Score: 318.5 bits (815), Expect = 1.1e-83 Identity = 189/305 (61.97%), Postives = 209/305 (68.52%), Query Frame = 1
BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|659074877|ref|XP_008437844.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo]) HSP 1 Score: 280.4 bits (716), Expect = 3.4e-72 Identity = 135/145 (93.10%), Postives = 142/145 (97.93%), Query Frame = 1
BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|719964087|ref|XP_010251634.1| (PREDICTED: uncharacterized membrane protein At1g16860-like isoform X3 [Nelumbo nucifera]) HSP 1 Score: 273.1 bits (697), Expect = 5.4e-70 Identity = 140/237 (59.07%), Postives = 181/237 (76.37%), Query Frame = 1
BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|703114546|ref|XP_010100686.1| (hypothetical protein L484_023455 [Morus notabilis]) HSP 1 Score: 257.7 bits (657), Expect = 2.3e-65 Identity = 147/280 (52.50%), Postives = 187/280 (66.79%), Query Frame = 1
BLAST of Lsi05G021610 vs. NCBI nr
Match: gi|223530521|gb|EEF32402.1| (hypothetical protein RCOM_0129790 [Ricinus communis]) HSP 1 Score: 226.9 bits (577), Expect = 4.4e-56 Identity = 108/171 (63.16%), Postives = 140/171 (81.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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