CmaCh14G021310 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAAGTAAAACCAACGCAATAACAACAGGTAAGCATAACTTAATCGGTATTCCTTAAAGAAATTTCATGATAATAAAACTTGAACTGAATTTGAAAATGTCGGAAGAGGAGGAGGATCAAACCTTTGGCATTGGGAGCTTCTGTTCTTTGGATCTTAGAAACATGAGGCCGAAGCTCCACGATTTCCCGCTGGAATTGGCAATTTAAACGCGCGGTTCTGAACCTAACGCAGACGATCATTGCCAGATTCCAAATCGACAATTAAAAAAAATCAGAAATACTCAATTATTTGGCGGTACTTATTTTACTTTTTAAAATGAATTTCGAGAGATTGTAAAGTTTTTCCATATTTTCATAGACAATTATGTAAGTTGCCTCTAAGACCAAAAAGGTAATTTAATGAAATAAAGAAATAGAGAAATAGTTAATTTAAATAAAAAAAAAAATGAAAAAGAGAAAAAGAAAAAACAATGAAGCCGTTTGACTATGGTACCAATTAACCGCACTGCCCCTCGCTTCGGCTGATTCTCTTGCACAGAGACGACAGACGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTTCCACCGTAAAACACCACCATTACACCGCTTGCAACCCCATTCCCTCCGCCGCTCTCTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTCGCCGTGGTTCACAACGCCTTCTTCTTCGTCTCTATCCTCCTTCTAGCCATCTTTCTCTCTGCTTTCGCCCTCTGGAATAGCCTCTACTTCTCCTCCAAAGCTGCAATGCTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCCTGCGAAGGTCAACTCGTTAAGATTACAGGGGTATTCCTTCTCTACTTTCTTCGCTCTTTTCAGCTTAATGGGTTATCAGATTTTCGTGAGTAGGTTGTATTTTCTCTTTCCAATAGCCACCGCTTATGGGTGTGATTTGTTTCTGCATTTTTTTGTTTTCCCTTTCGGCAATTCGTATGAGAGGTTCTGAAAATGTTTCCGTTGAGTTGATAATTGTAAAATGTTTGCTTGTGACATTAACATTTTGGAAACTCAAACCATTTAAATAGTTGATGTTAGCTGTTTGGGGTTTCATTTATTGTTGTTCTTAAGTACCCTGCAGATGAATTGGAGGATTAATGTTGTTTGCTGTTTCATATTCAGTTTGCTTCGTGCGGGAGTGTCTCTCTTGAATCATCCTATGAAAAGGCTAGTGGGTGTATATATGCTTCTACTTCTCTATATGAATATAGAGGAATGTCTCTGGTTTTTCAAAAGGTCACCCAACCTTACTGTGGTTGGAAGTTAGCATACAGTGAGGTATGCAAATTCCACTCCCAACAAACGTTTCGTTTCTTTGCTTCTATTGCTTTCTTGCAACAATGTCACTTTATGTTGTTTGGAAGCTACTGCATGAAGTGAAATAACTGTCATTTAGCTCCATTTTTTCTTTATGGTTCAAATGTCTCCAGTTGTATTCATTATCTTGACATCCTTATCTGCTCATTTTGGGATTTTTATTTGTCCTTGATATCAGTTTTTGTTATGATGGGTATGCGTTTAAGATTATTAATACCGCAGTGCTGGTATTTCTACCTAGCAGAGGTTCTCCACGGATTTCTACATAACTGATAGAAAAAGTGGCATTAGAGCTATGGTTCAGGCTGGCCCAGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACCAGACACCGTAAGATTCTGTCTTCTTCCTTGAGAAAATGGCTGAGAGACCGAAACCTTTCTACCGAAGCTCGAGTGCTTCGACTTGAAGAGGGGTAACCGCTTGTCGTGATAGCACCTGTTTGTTTGACTATGTTTGGCCGTAATTTCAGTAGCTAATTCCATGTGATTTTAGCAGATATGTTCAGGAAGGGAGCTTGGTGTCTGTAATGGGAATGTTGCATAAGAGTAACGGTCATTTAACAGTAGTTCAACCTCCAGATGCAATCTCTACCGGATGTTCATGGCGGAAACTTCTTCTTCCCATTGATATTGATGGACTAGTCCTTGGGGTCTCACCACAGACGTCTGGCCCTTCGCTCGTTCGGGGATCGTTATGTCAGCAAGAACAGTTGGCCGATATATGAGACTTGAACTTCAAGTATGTTGTAGATGGAAATTTTAATCTTCTTAACCTTTTGCTTATCATTAGTAATTTTGATCTTCTTTCAGTTCATCTATCTCTGCGCCCTTCG ATGCAAAGTAAAACCAACGCAATAACAACAGAGACGACAGACGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTTCCACCGTAAAACACCACCATTACACCGCTTGCAACCCCATTCCCTCCGCCGCTCTCTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTCGCCGTGGTTCACAACGCCTTCTTCTTCGTCTCTATCCTCCTTCTAGCCATCTTTCTCTCTGCTTTCGCCCTCTGGAATAGCCTCTACTTCTCCTCCAAAGCTGCAATGCTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCCTGCGAAGGTCAACTCGTTAAGATTACAGGGTTTGCTTCGTGCGGGAGTGTCTCTCTTGAATCATCCTATGAAAAGGCTAGTGGGTGTATATATGCTTCTACTTCTCTATATGAATATAGAGGAATGTCTCTGGTTTTTCAAAAGGTCACCCAACCTTACTGTGGTTGGAAGTTAGCATACAGTGAGAGGTTCTCCACGGATTTCTACATAACTGATAGAAAAAGTGGCATTAGAGCTATGGTTCAGGCTGGCCCAGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACCAGACACCGTAAGATTCTGTCTTCTTCCTTGAGAAAATGGCTGAGAGACCGAAACCTTTCTACCGAAGCTCGAGTGCTTCGACTTGAAGAGGGATATGTTCAGGAAGGGAGCTTGGTGTCTGTAATGGGAATGTTGCATAAGAGTAACGGTCATTTAACAGTAGTTCAACCTCCAGATGCAATCTCTACCGGATGTTCATGGCGGAAACTTCTTCTTCCCATTGATATTGATGGACTAGTCCTTGGGGTCTCACCACAGACGTCTGGCCCTTCGCTCGTTCGGGGATCGTTATGTCAGCAAGAACAGTTGGCCGATATATGAGACTTGAACTTCAATTCATCTATCTCTGCGCCCTTCG ATGCAAAGTAAAACCAACGCAATAACAACAGAGACGACAGACGAGCGAGTAATGAGCGACCTCTCCATTGCAGCTTCCACCGTAAAACACCACCATTACACCGCTTGCAACCCCATTCCCTCCGCCGCTCTCTACATTCTCATACCCCTTTTCATTTTGGGATTTTCCGTCTCCATTTTCGTCCTCGCCGTGGTTCACAACGCCTTCTTCTTCGTCTCTATCCTCCTTCTAGCCATCTTTCTCTCTGCTTTCGCCCTCTGGAATAGCCTCTACTTCTCCTCCAAAGCTGCAATGCTCTCATTTCTTCACTCTTTTCCCGACTCCGACCTCACACTTGCCTGCGAAGGTCAACTCGTTAAGATTACAGGGTTTGCTTCGTGCGGGAGTGTCTCTCTTGAATCATCCTATGAAAAGGCTAGTGGGTGTATATATGCTTCTACTTCTCTATATGAATATAGAGGAATGTCTCTGGTTTTTCAAAAGGTCACCCAACCTTACTGTGGTTGGAAGTTAGCATACAGTGAGAGGTTCTCCACGGATTTCTACATAACTGATAGAAAAAGTGGCATTAGAGCTATGGTTCAGGCTGGCCCAGGTAGTAAACTGGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACCAGACACCGTAAGATTCTGTCTTCTTCCTTGAGAAAATGGCTGAGAGACCGAAACCTTTCTACCGAAGCTCGAGTGCTTCGACTTGAAGAGGGATATGTTCAGGAAGGGAGCTTGGTGTCTGTAATGGGAATGTTGCATAAGAGTAACGGTCATTTAACAGTAGTTCAACCTCCAGATGCAATCTCTACCGGATGTTCATGGCGGAAACTTCTTCTTCCCATTGATATTGATGGACTAGTCCTTGGGGTCTCACCACAGACGTCTGGCCCTTCGCTCGTTCGGGGATCGTTATGTCAGCAAGAACAGTTGGCCGATATATGA MQSKTNAITTETTDERVMSDLSIAASTVKHHHYTACNPIPSAALYILIPLFILGFSVSIFVLAVVHNAFFFVSILLLAIFLSAFALWNSLYFSSKAAMLSFLHSFPDSDLTLACEGQLVKITGFASCGSVSLESSYEKASGCIYASTSLYEYRGMSLVFQKVTQPYCGWKLAYSERFSTDFYITDRKSGIRAMVQAGPGSKLVPLIIESKLVNTTRHRKILSSSLRKWLRDRNLSTEARVLRLEEGYVQEGSLVSVMGMLHKSNGHLTVVQPPDAISTGCSWRKLLLPIDIDGLVLGVSPQTSGPSLVRGSLCQQEQLADI
BLAST of CmaCh14G021310 vs. Swiss-Prot
Match: Y1686_ARATH (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.8e-45 Identity = 93/264 (35.23%), Postives = 160/264 (60.61%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TrEMBL
Match: A0A0A0L8G1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119250 PE=4 SV=1) HSP 1 Score: 482.3 bits (1240), Expect = 4.7e-133 Identity = 250/306 (81.70%), Postives = 275/306 (89.87%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TrEMBL
Match: F6I2W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02880 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 5.8e-91 Identity = 184/315 (58.41%), Postives = 233/315 (73.97%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TrEMBL
Match: M5X591_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021193mg PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89 Identity = 178/280 (63.57%), Postives = 219/280 (78.21%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TrEMBL
Match: A0A061E034_THECC (Ubiquitin-specific protease family C19-related protein isoform 1 OS=Theobroma cacao GN=TCM_005077 PE=4 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87 Identity = 183/305 (60.00%), Postives = 228/305 (74.75%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TrEMBL
Match: A0A067JX28_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14208 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.5e-86 Identity = 175/288 (60.76%), Postives = 218/288 (75.69%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TAIR10
Match: AT4G22290.1 (AT4G22290.1 Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 190.3 bits (482), Expect = 1.9e-48 Identity = 99/258 (38.37%), Postives = 155/258 (60.08%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TAIR10
Match: AT1G16860.1 (AT1G16860.1 Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 184.5 bits (467), Expect = 1.0e-46 Identity = 93/264 (35.23%), Postives = 160/264 (60.61%), Query Frame = 1
BLAST of CmaCh14G021310 vs. TAIR10
Match: AT1G78880.1 (AT1G78880.1 Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 179.9 bits (455), Expect = 2.5e-45 Identity = 92/264 (34.85%), Postives = 155/264 (58.71%), Query Frame = 1
BLAST of CmaCh14G021310 vs. NCBI nr
Match: gi|659074877|ref|XP_008437844.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo]) HSP 1 Score: 491.9 bits (1265), Expect = 8.6e-136 Identity = 253/306 (82.68%), Postives = 279/306 (91.18%), Query Frame = 1
BLAST of CmaCh14G021310 vs. NCBI nr
Match: gi|449432010|ref|XP_004133793.1| (PREDICTED: uncharacterized membrane protein At1g16860 [Cucumis sativus]) HSP 1 Score: 482.3 bits (1240), Expect = 6.8e-133 Identity = 250/306 (81.70%), Postives = 275/306 (89.87%), Query Frame = 1
BLAST of CmaCh14G021310 vs. NCBI nr
Match: gi|1009142553|ref|XP_015888783.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Ziziphus jujuba]) HSP 1 Score: 342.8 bits (878), Expect = 6.4e-91 Identity = 181/296 (61.15%), Postives = 224/296 (75.68%), Query Frame = 1
BLAST of CmaCh14G021310 vs. NCBI nr
Match: gi|657968943|ref|XP_008376185.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Malus domestica]) HSP 1 Score: 339.3 bits (869), Expect = 7.1e-90 Identity = 182/300 (60.67%), Postives = 229/300 (76.33%), Query Frame = 1
BLAST of CmaCh14G021310 vs. NCBI nr
Match: gi|731420719|ref|XP_010661482.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Vitis vinifera]) HSP 1 Score: 339.0 bits (868), Expect = 9.3e-90 Identity = 177/298 (59.40%), Postives = 224/298 (75.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|