MELO3C005993.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGNNNNNNNNNNNNNNNNNNNNGGGGTGAGTAATGAGCGACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTTGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTACTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATTCTCTCATTTCTTCACTCCCTTCCTGACTCCGACCTCACAATTGCTCGAGAAGGTCAATTCGTTAAGATTTCAGGGGTATTCTATTCATTTTCTTCTATCCCCATTTTTCCTTTTTCTTTTTTTCCCTCTAATTTCTTTACCATTTTCAGTTTCATTGGGTTGTATTTTCTCTTTTCAATTGGTATGACCGATGGGTTTGGTTTGTTTCTGCATATTTTTTTGTTTTATTGCTATGAGAGGCTACTAAATTCTGCTTTGAAGTGTATGTTGAGAGCCCTTTTTTTTTAATTATATATATATATATATTATTCGTTTTGTTGACTTGATATTTGTTAATATGCTTTGGTATCCTAACTAGGTTTGCTTATTCTAATGTGAGGTTGCATTTTGTTTTTTATAAATATATATAATGTTTGATTAGATATTTAAAAGTCATTTAGCAAGTCTTCGAATACTTAAACAACTCTTTGGAGGTGGTTCTTCAATGAAAGTGTGCGTGGGAGAAGTGTCATATTTTAGAGCATTTTCACGAGAAGTCATCTCGAACTCAATTTTAGTTATTGACATACTTCGTAGGGAGAAAAATTGTTCCGAGTGGTAGTTTCTCGTGTTTGGAAGTACTTACTATATGGGCTTCGTGTTACCTGTTCAGGATTCGATTCATTCTTGTTTTTAAATATATTTCAGGTGTGTTTGAGGATTGATGTTTACTGCTTTCTTATATTCAGTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCATCCTATGAAAAAGCTGCTGGATGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGTATATAGTGAGGTATGCAAATTCTACTCCCAAGAAACGTATCATTTCCTTGTTTTTATTGTTCTTTTGCAACTATAAAGCAATGGAGATTTTGTTCTTTTCCTGACCTTTTAACTTTTTTGCATACCTTTTCTTTCCCTTGCTCAGTCGGTCACTTTATGTTGTTTGGAAGCTACTGCATGAAGTGAAAGAAGTGACATTTAGCTCCAATTTTCTTTATGAGTCAAATGTCTCCAGTTGTATTCATTATCTTGACATCCATTCTGTTCATCGACCTTATTGGTTTAGAGTTCTTATCCGAAGAATCAAATATAGGAGGATTTGCATAAGATTTTCAAACTAGTTTGCTACTGTTCTTCTTTTTTCTTTGAGCCATCAAATTCAATATTTATTATTCTAAAGAATACCGAACAAGAATCTTATAAAATATAACTTGTATTGCTAATCTATGCATCAATGATATACCTTAATATCATTTTTCTTTTTTGACATCTAAATTAGGAATTTCCGTCTATTTACATTTGGGAATCTAGACAGATTGCACCTGTTAGTTTTAAACATGGGTGGAATTTTAGATTTTTAATATCGTGTGCTCATATTTCAACATGGCAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGGAAAATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGGTAACCCTGCTTATCGTGATAAGACCTGTTTGTTTGACTATGCTTGGCCATAATTTTAGTAGCTAATTCCATGTAATTTTAGCAGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTGGGAATGTTGCATAGGAATAACGGTCAAATAACAATAGTTCAACCTCCTGATGTAATCTCGACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTTTCACAAACTACTGGCCCTTCACTCGGTCCAGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGCTTAAATAGTATTTCGTAGATGGAAATTTTTTAGATGAAGGCCAAGTCCATTAGCATCCCTAACCTTTTGCTTATCATGAGTAACTTTAATCTTCTTTTAGTTCATCTATCTCTGTCCCTTCAGTTTCCGGAGTTACATTTGCGCATGTCCATAGGTTTCTGTTAACTTCAAATTCTACTTGAATGTACATTGATTAATTTTATGGAAATCAACCATCGGCGCTTTAACCAGCC GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGNNNNNNNNNNNNNNNNNNNNGGGGTGAGTAATGAGCGACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTTGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTACTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATTCTCTCATTTCTTCACTCCCTTCCTGACTCCGACCTCACAATTGCTCGAGAAGGTCAATTCGTTAAGATTTCAGGGTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCATCCTATGAAAAAGCTGCTGGATGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGTATATAGTGAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGGAAAATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTGGGAATGTTGCATAGGAATAACGGTCAAATAACAATAGTTCAACCTCCTGATGTAATCTCGACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTTTCACAAACTACTGGCCCTTCACTCGGTCCAGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGCTTAAATAGTATTTCGTAGATGGAAATTTTTTAGATGAAGGCCAAGTCCATTAGCATCCCTAACCTTTTGCTTATCATGAGTAACTTTAATCTTCTTTTAGTTCATCTATCTCTGTCCCTTCAGTTTCCGGAGTTACATTTGCGCATGTCCATAGGTTTCTGTTAACTTCAAATTCTACTTGAATGTACATTGATTAATTTTATGGAAATCAACCATCGGCGCTTTAACCAGCC ATGAGCGACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTTGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTACTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATTCTCTCATTTCTTCACTCCCTTCCTGACTCCGACCTCACAATTGCTCGAGAAGGTCAATTCGTTAAGATTTCAGGGTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCATCCTATGAAAAAGCTGCTGGATGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGTATATAGTGAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGGAAAATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTGGGAATGTTGCATAGGAATAACGGTCAAATAACAATAGTTCAACCTCCTGATGTAATCTCGACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTTTCACAAACTACTGGCCCTTCACTCGGTCCAGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGA MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQEQFADI
BLAST of MELO3C005993.2 vs. NCBI nr
Match: XP_016898903.1 (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo]) HSP 1 Score: 600.9 bits (1548), Expect = 2.4e-168 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of MELO3C005993.2 vs. NCBI nr
Match: XP_004133793.1 (PREDICTED: uncharacterized membrane protein At1g16860 [Cucumis sativus] >KGN56391.1 hypothetical protein Csa_3G119250 [Cucumis sativus]) HSP 1 Score: 573.9 bits (1478), Expect = 3.2e-160 Identity = 290/305 (95.08%), Postives = 296/305 (97.05%), Query Frame = 0
BLAST of MELO3C005993.2 vs. NCBI nr
Match: XP_022924397.1 (uncharacterized membrane protein At1g16860-like [Cucurbita moschata]) HSP 1 Score: 452.6 bits (1163), Expect = 1.1e-123 Identity = 233/305 (76.39%), Postives = 257/305 (84.26%), Query Frame = 0
BLAST of MELO3C005993.2 vs. NCBI nr
Match: XP_023527377.1 (uncharacterized membrane protein At1g16860-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 450.7 bits (1158), Expect = 4.0e-123 Identity = 233/305 (76.39%), Postives = 256/305 (83.93%), Query Frame = 0
BLAST of MELO3C005993.2 vs. NCBI nr
Match: XP_022147465.1 (uncharacterized membrane protein At1g16860-like [Momordica charantia]) HSP 1 Score: 445.3 bits (1144), Expect = 1.7e-121 Identity = 237/306 (77.45%), Postives = 253/306 (82.68%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TAIR10
Match: AT1G16860.1 (Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 186.8 bits (473), Expect = 2.0e-47 Identity = 96/264 (36.36%), Postives = 159/264 (60.23%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TAIR10
Match: AT1G78880.1 (Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 184.9 bits (468), Expect = 7.5e-47 Identity = 97/264 (36.74%), Postives = 156/264 (59.09%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TAIR10
Match: AT4G22290.1 (Ubiquitin-specific protease family C19-related protein) HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45 Identity = 94/258 (36.43%), Postives = 156/258 (60.47%), Query Frame = 0
BLAST of MELO3C005993.2 vs. Swiss-Prot
Match: sp|Q9FZ45|Y1686_ARATH (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana OX=3702 GN=At1g16860 PE=1 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.6e-46 Identity = 96/264 (36.36%), Postives = 159/264 (60.23%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TrEMBL
Match: tr|A0A1S4DSG0|A0A1S4DSG0_CUCME (uncharacterized membrane protein At1g16860-like OS=Cucumis melo OX=3656 GN=LOC103483151 PE=4 SV=1) HSP 1 Score: 600.9 bits (1548), Expect = 1.6e-168 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TrEMBL
Match: tr|A0A0A0L8G1|A0A0A0L8G1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119250 PE=4 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 2.1e-160 Identity = 290/305 (95.08%), Postives = 296/305 (97.05%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TrEMBL
Match: tr|A0A2N9IRP2|A0A2N9IRP2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54866 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 2.2e-101 Identity = 190/301 (63.12%), Postives = 235/301 (78.07%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TrEMBL
Match: tr|A0A2P6SIS8|A0A2P6SIS8_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0360741 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 3.0e-90 Identity = 172/286 (60.14%), Postives = 220/286 (76.92%), Query Frame = 0
BLAST of MELO3C005993.2 vs. TrEMBL
Match: tr|F6I2W2|F6I2W2_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0048g02880 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 6.6e-90 Identity = 169/299 (56.52%), Postives = 218/299 (72.91%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|