MELO3C005993 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005993
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ubiquitin-specific protease family C19 protein
Location	chr6 : 451581 .. 454136 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGNNNNNNNNNNNNNNNNNNNNGGGGTGAGTAATGAGCGACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTTGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTACTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATTCTCTCATTTCTTCACTCCCTTCCTGACTCCGACCTCACAATTGCTCGAGAAGGTCAATTCGTTAAGATTTCAGGGGTATTCTATTCATTTTCTTCTATCCCCATTTTTCCTTTTTCTTTTTTTCCCTCTAATTTCTTTACCATTTTCAGTTTCATTGGGTTGTATTTTCTCTTTTCAATTGGTATGACCGATGGGTTTGGTTTGTTTCTGCATATTTTTTTGTTTTATTGCTATGAGAGGCTACTAAATTCTGCTTTGAAGTGTATGTTGAGAGCCCTTTTTTTTTAATTATATATATATATATATTATTCGTTTTGTTGACTTGATATTTGTTAATATGCTTTGGTATCCTAACTAGGTTTGCTTATTCTAATGTGAGGTTGCATTTTGTTTTTTATAAATATATATAATGTTTGATTAGATATTTAAAAGTCATTTAGCAAGTCTTCGAATACTTAAACAACTCTTTGGAGGTGGTTCTTCAATGAAAGTGTGCGTGGGAGAAGTGTCATATTTTAGAGCATTTTCACGAGAAGTCATCTCGAACTCAATTTTAGTTATTGACATACTTCGTAGGGAGAAAAATTGTTCCGAGTGGTAGTTTCTCGTGTTTGGAAGTACTTACTATATGGGCTTCGTGTTACCTGTTCAGGATTCGATTCATTCTTGTTTTTAAATATATTTCAGGTGTGTTTGAGGATTGATGTTTACTGCTTTCTTATATTCAGTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCATCCTATGAAAAAGCTGCTGGATGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGTATATAGTGAGGTATGCAAATTCTACTCCCAAGAAACGTATCATTTCCTTGTTTTTATTGTTCTTTTGCAACTATAAAGCAATGGAGATTTTGTTCTTTTCCTGACCTTTTAACTTTTTTGCATACCTTTTCTTTCCCTTGCTCAGTCGGTCACTTTATGTTGTTTGGAAGCTACTGCATGAAGTGAAAGAAGTGACATTTAGCTCCAATTTTCTTTATGAGTCAAATGTCTCCAGTTGTATTCATTATCTTGACATCCATTCTGTTCATCGACCTTATTGGTTTAGAGTTCTTATCCGAAGAATCAAATATAGGAGGATTTGCATAAGATTTTCAAACTAGTTTGCTACTGTTCTTCTTTTTTCTTTGAGCCATCAAATTCAATATTTATTATTCTAAAGAATACCGAACAAGAATCTTATAAAATATAACTTGTATTGCTAATCTATGCATCAATGATATACCTTAATATCATTTTTCTTTTTGACATCTAAATTAGGAATTTCCGTCTATTTACATTTGGGAATCTAGACAGATTGCACCTGTTAGTTTTAAACATGGGTGGAATTTTAGATTTTTAATATCGTGTGCTCATATTTCAACATGGCAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGGAAAATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGGTAACCCTGCTTATCGTGATAAGACCTGTTTGTTTGACTATGCTTGGCCATAATTTTAGTAGCTAATTCCATGTAATTTTAGCAGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTGGGAATGTTGCATAGGAATAACGGTCAAATAACAATAGTTCAACCTCCTGATGTAATCTCGACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTTTCACAAACTACTGGCCCTTCACTCGGTCCAGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGCTTAAATAGTATTTCGTAGATGGAAATTTTTTAGATGAAGGCCAAGTCCATTAGCATCCCTAACCTTTTGCTTATCATGAGTAACTTTAATCTTCTTTTAGTTCATCTATCTCTGTCCCTTCAGTTTCCGGAGTTACATTTGCGCATGTCCATAGGTTTCTGTTAACTTCAAATTCTACTTGAATGTACATTGATTAATTTTATGGAAATCAACCATCGGCGCTTTAACCAGCC

mRNA sequence

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGGNNNNNNNNNNNNNNNNNNNNGGGGTGAGTAATGAGCGACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTTGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTACTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATTCTCTCATTTCTTCACTCCCTTCCTGACTCCGACCTCACAATTGCTCGAGAAGGTCAATTCGTTAAGATTTCAGGGTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCATCCTATGAAAAAGCTGCTGGATGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGTATATAGTGAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGGAAAATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTGGGAATGTTGCATAGGAATAACGGTCAAATAACAATAGTTCAACCTCCTGATGTAATCTCGACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTTTCACAAACTACTGGCCCTTCACTCGGTCCAGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGAAGCTTAAATAGTATTTCGTAGATGGAAATTTTTTAGATGAAGGCCAAGTCCATTAGCATCCCTAACCTTTTGCTTATCATGAGTAACTTTAATCTTCTTTTAGTTCATCTATCTCTGTCCCTTCAGTTTCCGGAGTTACATTTGCGCATGTCCATAGGTTTCTGTTAACTTCAAATTCTACTTGAATGTACATTGATTAATTTTATGGAAATCAACCATCGGCGCTTTAACCAGCC

Coding sequence (CDS)

ATGAGCGACCTCTCCTCCATTGAAGCTCCAACTGAAAAACACTACCACCATTACAGCGCCTGCAACCCCATTCCTTCTCCCGCTCTTTACATTCTCATTCCCCTTTTTATTTTGGGCTTTTCCGTTTCCATTTTCGTCCTTGTTGTCGTTCACAACGCCTTCTTCTTCATTTCTCTTCTCTTTCTATCCATCTTCCTCTCTACTTTTGCCCTCTGGAATAGCCTCAACTTCTCCTCCAAAACCGCCATTCTCTCATTTCTTCACTCCCTTCCTGACTCCGACCTCACAATTGCTCGAGAAGGTCAATTCGTTAAGATTTCAGGGTTTGCTTCGTGCGGAACGGTGTCTCTGGAATCATCCTATGAAAAAGCTGCTGGATGTGTTTATGCATCAACCTCTTTATATGAATATAGAGGAATGCCTCTGATTTTTCAAAAGATAACTCAACCTTACTGTGGTTGGAGGTTAGTATATAGTGAGAGGTTTTCCACTGACTTCTACATAACTGATAGAAAAACTGGTATTAGAGCTATGGTAAGGGCCGGCCCCGGTAGTAAACTAGTTCCTCTTATTATTGAGAGCAAGCTTGTTAATACTACAAGACACCGGAAAATTCTGTCTCCTTCCTTGAGAAAATGGCTGAGAGAAAAAAACATTTCTACTGAAGCCCGAATGCTTCGACTTGAAGAAGGATATGTTCAAGAAGGCAGCTTTGTATCTGTATTGGGAATGTTGCATAGGAATAACGGTCAAATAACAATAGTTCAACCTCCTGATGTAATCTCGACTGGATGTGTATGGCGGAAACTTCTTCTTCCCATTTACATTGATGGAGTAGTTCTTGGGGTTTCACAAACTACTGGCCCTTCACTCGGTCCAGGATCGTTATGTCACCAAGAACAGTTTGCTGACATATGA

Protein sequence

MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQEQFADI*

Homology

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BLAST of MELO3C005993 vs. Swiss-Prot
Match: Y1686_ARATH (Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 PE=1 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.2e-49
Identity = 96/264 (36.36%), Postives = 158/264 (59.85%), Query Frame = 1


Query: 18  YSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSLNF 77
           +S     P P L++++ +FI+GF    F+L  VHN    + +  L   ++   +WN    
Sbjct: 200 FSCLKSFPKPVLWLVVLIFIMGFLAGGFILGAVHNPILLVVVAILFTVVAALFIWNIC-- 259

Query: 78  SSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLYEY 137
             +  I  F+   PD+DL  A+ GQ VK++G  +CG V LESS+ +   CVY ST LYEY
Sbjct: 260 WGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEY 319

Query: 138 RGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESKLV 197
           RG        +  +  W L  SER   DFYI+D ++G+RA+V+ G G+K+ PL+ +S ++
Sbjct: 320 RGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQSGLRALVKTGSGAKVTPLVDDSVVI 379

Query: 198 NTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIVQP 257
           +  +  + +SP   +WL +KN++++ R++RL+EGY++EGS VSV+G++ RN+  + IV  
Sbjct: 380 DFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPS 439

Query: 258 PDVISTGCVWRKLLLPIYIDGVVL 282
            + ++ G  WR+   P  ++G+VL
Sbjct: 440 SEPLAAGWQWRRCTFPTSLEGIVL 461

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BLAST of MELO3C005993 vs. TrEMBL
Match: A0A0A0L8G1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119250 PE=4 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 1.1e-163
Identity = 290/305 (95.08%), Postives = 296/305 (97.05%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           MS+LSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL
Sbjct: 1   MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60

Query: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120
           FLSIFLS FALWNSLNFSSKTAILSFLHSLPDSDLT+A+EGQ VKISGFASCGTVSLESS
Sbjct: 61  FLSIFLSAFALWNSLNFSSKTAILSFLHSLPDSDLTLAQEGQLVKISGFASCGTVSLESS 120

Query: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180
           YEKA GCVYASTSLYEYRGMP+IFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR
Sbjct: 121 YEKATGCVYASTSLYEYRGMPMIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180

Query: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240
           AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEAR+LRLEEGYVQEGSFVS
Sbjct: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARILRLEEGYVQEGSFVS 240

Query: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQE 300
           V GMLHRNNGQITIVQPPDVISTGCVWRK LLPIYIDG+VLGVSQ TGP LGPGSL H E
Sbjct: 241 VFGMLHRNNGQITIVQPPDVISTGCVWRKFLLPIYIDGLVLGVSQATGPLLGPGSLYHHE 300

Query: 301 QFADI 306
           QFADI
Sbjct: 301 QFADI 305

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BLAST of MELO3C005993 vs. TrEMBL
Match: F6I2W2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02880 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.7e-93
Identity = 171/299 (57.19%), Postives = 219/299 (73.24%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           +S+ SSI++      H YS C PIPS  LY+L+PLF  G +VSIF+L+ VHNAF F+SLL
Sbjct: 33  LSNASSIQS------HCYS-CKPIPSQVLYVLVPLFFTGLAVSIFILIAVHNAFLFVSLL 92

Query: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120
            LS  ++ F +WN++N+    A+  +L S PDSDL +AR GQ VKI+G  SCG +SLESS
Sbjct: 93  CLSALVAAFLIWNTVNWRRSRALFCYLRSFPDSDLRLARHGQLVKITGLVSCGNISLESS 152

Query: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180
           YEKA  C+Y ST LYEY G+ L       P  GW L Y ERFSTDFYITD K+GIRA+V+
Sbjct: 153 YEKATRCIYTSTLLYEYPGLGLKLADAKVPCFGWGLAYCERFSTDFYITDSKSGIRALVK 212

Query: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240
           AG GS++ PLI+ES+LVNTTR  + LS   +KWL E+NIS +AR+LRLEEGYV+EGS ++
Sbjct: 213 AGSGSRVTPLIVESRLVNTTRKCRFLSSHFKKWLAERNISGQARLLRLEEGYVKEGSSMA 272

Query: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQ 300
           V+GMLHR+N  + IVQPP+++STGC+WRKLLLP+ IDGV+LGV +  GP   P S   Q
Sbjct: 273 VIGMLHRDNDALMIVQPPELLSTGCLWRKLLLPVDIDGVILGVPEMVGPVANPPSSMQQ 324

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BLAST of MELO3C005993 vs. TrEMBL
Match: A0A067JX28_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14208 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 9.5e-91
Identity = 170/301 (56.48%), Postives = 220/301 (73.09%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           M+DLSS     +   +    C PIP  A++IL+ LF +G SVSIF+L+VVHNA FF+S L
Sbjct: 1   MNDLSSAVLREQNSEN----CKPIPRVAVFILVALFAIGLSVSIFILIVVHNAIFFLSFL 60

Query: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120
            +S  + +F  WN +N+  K A+  FL S PDSDL  AR+GQ VKI+G ASCG+VSLESS
Sbjct: 61  LISGLVISFIAWNRVNWRHKAAVFRFLRSFPDSDLASARDGQLVKITGLASCGSVSLESS 120

Query: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180
           YE+A  C+YAST LYEY G  L  +        W L Y ER+STDFYITDRK+GIRA+V+
Sbjct: 121 YERATRCIYASTLLYEYGGFGLKPKDANTSCFQWSLTYCERYSTDFYITDRKSGIRALVK 180

Query: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240
           AGPG K+VPLI+ESKLV TTR  +ILSP LRKWL+++N+S EAR+LRLEEGY+Q GS V+
Sbjct: 181 AGPGCKVVPLIVESKLVATTRQCRILSPHLRKWLQDRNLSVEARLLRLEEGYIQGGSIVT 240

Query: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQE 300
           V+G+LHRN+  + IVQP +++STGC+W KL+LPI IDG+V+G+S  +GP   P    H +
Sbjct: 241 VIGVLHRNDDILMIVQPQELLSTGCLWTKLILPIDIDGLVVGLSNLSGPISNPDFRQHTQ 297

Query: 301 Q 302
           Q
Sbjct: 301 Q 297

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BLAST of MELO3C005993 vs. TrEMBL
Match: M5X591_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021193mg PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 1.2e-90
Identity = 167/266 (62.78%), Postives = 207/266 (77.82%), Query Frame = 1


Query: 16  HHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSL 75
           H  SA  PIPS  LYIL+P+F LG SVSIF+L+VVHNA FF+S L LS  +  F +WN  
Sbjct: 17  HQSSAFKPIPSLVLYILVPIFFLGLSVSIFILIVVHNALFFVSFLVLSALVFAFVVWNKR 76

Query: 76  NFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLY 135
           +++ K A   FL+SLP+SDL +A+ GQ VKI+G ASC ++SLESSYEKA GC+YAST LY
Sbjct: 77  HWAKKAAFFLFLNSLPESDLRLAQHGQLVKITGIASCESLSLESSYEKATGCIYASTLLY 136

Query: 136 EYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESK 195
           EYRG+      I      W L Y ERFSTDFY+TD+K+G+RA V+AG G K++PL++ESK
Sbjct: 137 EYRGLTRQPVNINSSCFQWHLAYCERFSTDFYLTDQKSGLRATVKAGSGCKVIPLVVESK 196

Query: 196 LVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIV 255
           LVNT R R +LSP LRKWL E+N+S+E+R+LRLEEGYVQEGS V+V GMLHRNN   TIV
Sbjct: 197 LVNTKRCR-LLSPHLRKWLSERNLSSESRLLRLEEGYVQEGSSVTVFGMLHRNNEITTIV 256

Query: 256 QPPDVISTGCVWRKLLLPIYIDGVVL 282
           QPP+VISTGC+WRKLLLP+ IDG++L
Sbjct: 257 QPPEVISTGCLWRKLLLPVDIDGLIL 281

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BLAST of MELO3C005993 vs. TrEMBL
Match: A0A061E034_THECC (Ubiquitin-specific protease family C19-related protein isoform 1 OS=Theobroma cacao GN=TCM_005077 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.7e-90
Identity = 173/303 (57.10%), Postives = 227/303 (74.92%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           M+DLS+  A   +    YS C PIPS ALYIL+ LF +G SVSIF+LVVVHNA F +S L
Sbjct: 27  MNDLSN--AAVREQQSSYS-CKPIPSLALYILVTLFFIGLSVSIFILVVVHNAAFLLSFL 86

Query: 61  FLSIFLSTFALWNSLNFS--SKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLE 120
           FLS  +++F  WN++N+   +K A   FL+S PDSDL +AR+GQ VKI+G ASCG+ SLE
Sbjct: 87  FLSALVASFLAWNAVNWRHHNKAAFGFFLNSFPDSDLRLARQGQLVKITGVASCGSHSLE 146

Query: 121 SSYEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAM 180
           +SYE+ A C+YAST LYEY    L    + +    W L Y ERFSTDFYITD+K+G+RA+
Sbjct: 147 TSYERVARCIYASTLLYEYGQFGLKPVNVNRSCFQWNLAYCERFSTDFYITDQKSGVRAV 206

Query: 181 VRAGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSF 240
           V+AG G +++PLIIES+LVNTT+  + LSP L  WLR+KN+S EAR+LRLEEGYVQEGS 
Sbjct: 207 VKAGSGCEVMPLIIESELVNTTKQCRTLSPHLSNWLRDKNLSAEARLLRLEEGYVQEGST 266

Query: 241 VSVLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCH 300
           VS++GMLH++N  + IVQPP++ISTGC+WR+LLLP+ +DG++LG+  T  P+L   S+ H
Sbjct: 267 VSIIGMLHKSNDILMIVQPPEIISTGCLWRRLLLPVDVDGLILGIPDTK-PTLDLNSIQH 325

Query: 301 QEQ 302
            EQ
Sbjct: 327 PEQ 325

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BLAST of MELO3C005993 vs. TAIR10
Match: AT1G16860.1 (AT1G16860.1 Ubiquitin-specific protease family C19-related protein)

HSP 1 Score: 198.4 bits (503), Expect = 6.6e-51
Identity = 96/264 (36.36%), Postives = 158/264 (59.85%), Query Frame = 1


Query: 18  YSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSLNF 77
           +S     P P L++++ +FI+GF    F+L  VHN    + +  L   ++   +WN    
Sbjct: 200 FSCLKSFPKPVLWLVVLIFIMGFLAGGFILGAVHNPILLVVVAILFTVVAALFIWNIC-- 259

Query: 78  SSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLYEY 137
             +  I  F+   PD+DL  A+ GQ VK++G  +CG V LESS+ +   CVY ST LYEY
Sbjct: 260 WGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEY 319

Query: 138 RGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESKLV 197
           RG        +  +  W L  SER   DFYI+D ++G+RA+V+ G G+K+ PL+ +S ++
Sbjct: 320 RGWGSKPANSSHRHFTWGLRSSERHVVDFYISDFQSGLRALVKTGSGAKVTPLVDDSVVI 379

Query: 198 NTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIVQP 257
           +  +  + +SP   +WL +KN++++ R++RL+EGY++EGS VSV+G++ RN+  + IV  
Sbjct: 380 DFKQGSEQVSPDFVRWLGKKNLTSDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPS 439

Query: 258 PDVISTGCVWRKLLLPIYIDGVVL 282
            + ++ G  WR+   P  ++G+VL
Sbjct: 440 SEPLAAGWQWRRCTFPTSLEGIVL 461

[Close]

BLAST of MELO3C005993 vs. TAIR10
Match: AT1G78880.1 (AT1G78880.1 Ubiquitin-specific protease family C19-related protein)

HSP 1 Score: 196.4 bits (498), Expect = 2.5e-50
Identity = 97/264 (36.74%), Postives = 154/264 (58.33%), Query Frame = 1


Query: 18  YSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSLNF 77
           +S     P P L+++I +F++GF    F+L  VHNA   I +  L   ++   +WN    
Sbjct: 194 FSCMKSFPKPVLWLVILIFVMGFLAGGFILGAVHNAILLIVVAVLFTVVAALFIWNIS-- 253

Query: 78  SSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLYEY 137
             +  I  F+   PD+DL  A+ GQ+VK++G  +CG V LESS+ +   CVY ST LYEY
Sbjct: 254 CERRGITDFIARYPDADLRTAKNGQYVKVTGVVTCGNVPLESSFHRVPRCVYTSTCLYEY 313

Query: 138 RGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESKLV 197
           RG        +     W L  +ER   DFYI+D ++G+RA+V+ G G+K+ PL+ +S ++
Sbjct: 314 RGWGSKPANASHRRFTWGLRSAERHVVDFYISDFQSGLRALVKTGNGAKVTPLVDDSVVI 373

Query: 198 NTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIVQP 257
           +     +  SP   +WL +KN++ + R++RL+EGY++EGS VSV+G++ RN+  + IV  
Sbjct: 374 DFKPGNEQASPDFVRWLGKKNLTNDDRIMRLKEGYIKEGSTVSVIGVVQRNDNVLMIVPT 433

Query: 258 PDVISTGCVWRKLLLPIYIDGVVL 282
            + ++ G  W K   P  ++G+VL
Sbjct: 434 TEPLAAGWQWSKCTFPASLEGIVL 455

[Close]

BLAST of MELO3C005993 vs. TAIR10
Match: AT4G22290.1 (AT4G22290.1 Ubiquitin-specific protease family C19-related protein)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-49
Identity = 94/258 (36.43%), Postives = 154/258 (59.69%), Query Frame = 1


Query: 24  IPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSLNFSSKTAI 83
           +P   ++ ++ +  +G  V  F+ V V       ++L          +WN +    +  +
Sbjct: 177 VPKAMVWAVLIVAAMGLLVGAFLTVAVKKPVVIAAVLAAVCPAIVVLVWNCV--WRRKGL 236

Query: 84  LSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLYEYRGMPLI 143
           LSF+   PD++L  A +GQFVK++G  +CG++ LESS+++   CVY ST LYEY+G    
Sbjct: 237 LSFIKKYPDAELRGAIDGQFVKVTGVVTCGSIPLESSFQRTPRCVYVSTELYEYKGFGGK 296

Query: 144 FQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESKLVNTTRHR 203
                     W   ++E++ +DFYI+D ++G+RA+V+AG GSK+ P +  + + N T   
Sbjct: 297 SANPKHRCFSWGSRHAEKYVSDFYISDFQSGLRALVKAGYGSKVSPFVKPATVANVTTQN 356

Query: 204 KILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIVQPPDVIST 263
           K LSPS  KWL ++N+S + R++RL+EGY++EGS VSV+GM+ R++  + IV P + +S+
Sbjct: 357 KDLSPSFLKWLSDRNLSADDRVMRLKEGYIKEGSTVSVMGMVRRHDNVLMIVPPAEAVSS 416

Query: 264 GCVWRKLLLPIYIDGVVL 282
           GC W   L P Y DG+++
Sbjct: 417 GCRWWHCLFPTYADGLII 432

[Close]

BLAST of MELO3C005993 vs. NCBI nr
Match: gi|659074877|ref|XP_008437844.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo])

HSP 1 Score: 610.9 bits (1574), Expect = 1.2e-171
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL
Sbjct: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60

Query: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120
           FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS
Sbjct: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120

Query: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180
           YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR
Sbjct: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180

Query: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240
           AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS
Sbjct: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240

Query: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQE 300
           VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQE
Sbjct: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQE 300

Query: 301 QFADI 306
           QFADI
Sbjct: 301 QFADI 305

[Close]

BLAST of MELO3C005993 vs. NCBI nr
Match: gi|449432010|ref|XP_004133793.1| (PREDICTED: uncharacterized membrane protein At1g16860 [Cucumis sativus])

HSP 1 Score: 583.9 bits (1504), Expect = 1.6e-163
Identity = 290/305 (95.08%), Postives = 296/305 (97.05%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           MS+LSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL
Sbjct: 1   MSNLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60

Query: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120
           FLSIFLS FALWNSLNFSSKTAILSFLHSLPDSDLT+A+EGQ VKISGFASCGTVSLESS
Sbjct: 61  FLSIFLSAFALWNSLNFSSKTAILSFLHSLPDSDLTLAQEGQLVKISGFASCGTVSLESS 120

Query: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180
           YEKA GCVYASTSLYEYRGMP+IFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR
Sbjct: 121 YEKATGCVYASTSLYEYRGMPMIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180

Query: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240
           AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEAR+LRLEEGYVQEGSFVS
Sbjct: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARILRLEEGYVQEGSFVS 240

Query: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQE 300
           V GMLHRNNGQITIVQPPDVISTGCVWRK LLPIYIDG+VLGVSQ TGP LGPGSL H E
Sbjct: 241 VFGMLHRNNGQITIVQPPDVISTGCVWRKFLLPIYIDGLVLGVSQATGPLLGPGSLYHHE 300

Query: 301 QFADI 306
           QFADI
Sbjct: 301 QFADI 305

[Close]

BLAST of MELO3C005993 vs. NCBI nr
Match: gi|731420719|ref|XP_010661482.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Vitis vinifera])

HSP 1 Score: 350.1 bits (897), Expect = 3.8e-93
Identity = 171/299 (57.19%), Postives = 219/299 (73.24%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           +S+ SSI++      H YS C PIPS  LY+L+PLF  G +VSIF+L+ VHNAF F+SLL
Sbjct: 4   LSNASSIQS------HCYS-CKPIPSQVLYVLVPLFFTGLAVSIFILIAVHNAFLFVSLL 63

Query: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120
            LS  ++ F +WN++N+    A+  +L S PDSDL +AR GQ VKI+G  SCG +SLESS
Sbjct: 64  CLSALVAAFLIWNTVNWRRSRALFCYLRSFPDSDLRLARHGQLVKITGLVSCGNISLESS 123

Query: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180
           YEKA  C+Y ST LYEY G+ L       P  GW L Y ERFSTDFYITD K+GIRA+V+
Sbjct: 124 YEKATRCIYTSTLLYEYPGLGLKLADAKVPCFGWGLAYCERFSTDFYITDSKSGIRALVK 183

Query: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240
           AG GS++ PLI+ES+LVNTTR  + LS   +KWL E+NIS +AR+LRLEEGYV+EGS ++
Sbjct: 184 AGSGSRVTPLIVESRLVNTTRKCRFLSSHFKKWLAERNISGQARLLRLEEGYVKEGSSMA 243

Query: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQ 300
           V+GMLHR+N  + IVQPP+++STGC+WRKLLLP+ IDGV+LGV +  GP   P S   Q
Sbjct: 244 VIGMLHRDNDALMIVQPPELLSTGCLWRKLLLPVDIDGVILGVPEMVGPVANPPSSMQQ 295

[Close]

BLAST of MELO3C005993 vs. NCBI nr
Match: gi|1009142553|ref|XP_015888783.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Ziziphus jujuba])

HSP 1 Score: 349.4 bits (895), Expect = 6.5e-93
Identity = 167/273 (61.17%), Postives = 213/273 (78.02%), Query Frame = 1


Query: 16  HHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLLFLSIFLSTFALWNSL 75
           HH S C PIPS ALYIL  LF++G SVSIF+L+VVHNAFFF+S L +S  +  F LWN+ 
Sbjct: 145 HHCSTCKPIPSLALYILTSLFVIGLSVSIFILIVVHNAFFFVSFLLVSAIVLAFILWNTR 204

Query: 76  NFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESSYEKAAGCVYASTSLY 135
           ++  + A+  FL SLP++DL +A+EGQ VKI+G  +CG++SLESSYE+A  C+YAST LY
Sbjct: 205 SWRRRGAMFFFLSSLPETDLRLAQEGQLVKITGLTTCGSISLESSYERATRCLYASTLLY 264

Query: 136 EYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVRAGPGSKLVPLIIESK 195
           EY G+ L      +    W L Y ERFSTDFYITD+K+G+RAMV+AG G K+VPLI+ES+
Sbjct: 265 EYGGLALNLVSFNKSCFQWSLAYCERFSTDFYITDKKSGLRAMVKAGSGCKVVPLILESR 324

Query: 196 LVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVSVLGMLHRNNGQITIV 255
           L+NTTR  +ILSP L KWLRE+N+S EAR+LRLEEGYVQEGS V+V+G+L RNN    IV
Sbjct: 325 LINTTRECRILSPYLTKWLRERNLSVEARLLRLEEGYVQEGSSVTVVGLLRRNNDTPMIV 384

Query: 256 QPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTG 289
           QPP++ISTGC+W+KLLLP+ IDG++L VSQ  G
Sbjct: 385 QPPEIISTGCLWQKLLLPVDIDGLILSVSQMAG 417

[Close]

BLAST of MELO3C005993 vs. NCBI nr
Match: gi|470145312|ref|XP_004308285.1| (PREDICTED: uncharacterized membrane protein At1g16860-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 347.4 bits (890), Expect = 2.5e-92
Identity = 175/301 (58.14%), Postives = 227/301 (75.42%), Query Frame = 1


Query: 1   MSDLSSIEAPTEKHYHHYSACNPIPSPALYILIPLFILGFSVSIFVLVVVHNAFFFISLL 60
           M+DLS+      + +H  +   PIPS  LYILIP+F+LG SVSIF+L+ VHNA FF+  L
Sbjct: 1   MNDLSNAVL---RGHHTSTPFKPIPSLVLYILIPIFLLGLSVSIFILIAVHNALFFVFFL 60

Query: 61  FLSIFLSTFALWNSLNFSSKTAILSFLHSLPDSDLTIAREGQFVKISGFASCGTVSLESS 120
            LS  +  F LWN+ ++++++A+L FL+SLPDSDL +A+ G  VKI+G ASCG++SLESS
Sbjct: 61  LLSALVLAFVLWNTRHWATQSAVLFFLNSLPDSDLRVAQHGDLVKITGLASCGSLSLESS 120

Query: 121 YEKAAGCVYASTSLYEYRGMPLIFQKITQPYCGWRLVYSERFSTDFYITDRKTGIRAMVR 180
           YEKA  CVYAST LYEY+G+ L  +   +    W L Y ERFSTDFY+TDRK+G+RA+V+
Sbjct: 121 YEKATRCVYASTLLYEYKGLTLHPRNAKRSCFQWHLEYCERFSTDFYLTDRKSGLRAIVK 180

Query: 181 AGPGSKLVPLIIESKLVNTTRHRKILSPSLRKWLREKNISTEARMLRLEEGYVQEGSFVS 240
           AG G  L+PL+ ESKLVN TR  +ILSP L KWLRE+N+S E+R+LRLEEGYVQEGS V+
Sbjct: 181 AGSGCNLIPLVFESKLVN-TRKSRILSPHLTKWLRERNLSAESRLLRLEEGYVQEGSTVT 240

Query: 241 VLGMLHRNNGQITIVQPPDVISTGCVWRKLLLPIYIDGVVLGVSQTTGPSLGPGSLCHQE 300
           V GMLH+NN   TIVQPP+VIS+GC WRKLLLP+ IDG++L +SQ  G S+   S+ H E
Sbjct: 241 VFGMLHKNNEMTTIVQPPEVISSGCQWRKLLLPVDIDGLIL-ISQMAGQSVNQNSIQHPE 296

Query: 301 Q 302
           +
Sbjct: 301 R 296

The following BLAST results are available for this feature:

BLAST of MELO3C005993 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1686_ARATH	1.2e-49	36.36	Uncharacterized membrane protein At1g16860 OS=Arabidopsis thaliana GN=At1g16860 ...	[more]

BLAST of MELO3C005993 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8G1_CUCSA	1.1e-163	95.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119250 PE=4 SV=1	[more]
F6I2W2_VITVI	2.7e-93	57.19	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02880 PE=4 SV=...	[more]
A0A067JX28_JATCU	9.5e-91	56.48	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14208 PE=4 SV=1	[more]
M5X591_PRUPE	1.2e-90	62.78	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021193mg PE=4 S...	[more]
A0A061E034_THECC	4.7e-90	57.10	Ubiquitin-specific protease family C19-related protein isoform 1 OS=Theobroma ca...	[more]

BLAST of MELO3C005993 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16860.1	6.6e-51	36.36	Ubiquitin-specific protease family C19-related protein	[more]
AT1G78880.1	2.5e-50	36.74	Ubiquitin-specific protease family C19-related protein	[more]
AT4G22290.1	3.6e-49	36.43	Ubiquitin-specific protease family C19-related protein	[more]

BLAST of MELO3C005993 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074877\|ref\|XP_008437844.1\|	1.2e-171	100.00	PREDICTED: uncharacterized membrane protein At1g16860-like [Cucumis melo]	[more]
gi\|449432010\|ref\|XP_004133793.1\|	1.6e-163	95.08	PREDICTED: uncharacterized membrane protein At1g16860 [Cucumis sativus]	[more]
gi\|731420719\|ref\|XP_010661482.1\|	3.8e-93	57.19	PREDICTED: uncharacterized membrane protein At1g16860-like [Vitis vinifera]	[more]
gi\|1009142553\|ref\|XP_015888783.1\|	6.5e-93	61.17	PREDICTED: uncharacterized membrane protein At1g16860-like [Ziziphus jujuba]	[more]
gi\|470145312\|ref\|XP_004308285.1\|	2.5e-92	58.14	PREDICTED: uncharacterized membrane protein At1g16860-like [Fragaria vesca subsp...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005993T1	MELO3C005993T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33709	FAMILY NOT NAMED	coord: 16..294 score: 1.3E
None	No IPR available	PANTHER	PTHR33709:SF1	SUBFAMILY NOT NAMED	coord: 16..294 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005993	Csa3G119250	Cucumber (Chinese Long) v2	cumeB236
MELO3C005993	Cla021122	Watermelon (97103) v1	mewmB461
MELO3C005993	ClCG05G000540	Watermelon (Charleston Gray)	mewcgB427
MELO3C005993	Cla97C05G080570	Watermelon (97103) v2	mewmbB434
MELO3C005993	Bhi01G000394	Wax gourd	mewgoB540
MELO3C005993	CSPI03G07610	Wild cucumber (PI 183967)	cpimeB230
MELO3C005993	Cucsa.259550	Cucumber (Gy14) v1	cgymeB439
MELO3C005993	CmaCh14G021310	Cucurbita maxima (Rimu)	cmameB242
MELO3C005993	CmoCh14G021940	Cucurbita moschata (Rifu)	cmomeB230
MELO3C005993	Lsi05G021610	Bottle gourd (USVL1VR-Ls)	lsimeB378
MELO3C005993	CsGy3G007770	Cucumber (Gy14) v2	cgybmeB200
MELO3C005993	Carg25715	Silver-seed gourd	carmeB0128
MELO3C005993	CsaV3_3G007760	Cucumber (Chinese Long) v3	cucmeB236

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005993	Cucurbita pepo (Zucchini)	cpemeB815
MELO3C005993	Silver-seed gourd	carmeB0968
MELO3C005993	Cucumber (Chinese Long) v3	cucmeB411
MELO3C005993	Wax gourd	mewgoB523
MELO3C005993	Melon (DHL92) v3.5.1	memeB018
MELO3C005993	Cucumber (Gy14) v1	cgymeB369
MELO3C005993	Cucurbita maxima (Rimu)	cmameB009
MELO3C005993	Cucurbita maxima (Rimu)	cmameB766
MELO3C005993	Cucurbita maxima (Rimu)	cmameB771
MELO3C005993	Cucurbita moschata (Rifu)	cmomeB572
MELO3C005993	Cucurbita moschata (Rifu)	cmomeB755
MELO3C005993	Wild cucumber (PI 183967)	cpimeB399
MELO3C005993	Cucumber (Chinese Long) v2	cumeB402
MELO3C005993	Watermelon (97103) v1	mewmB478
MELO3C005993	Cucurbita pepo (Zucchini)	cpemeB585