Lsi05G018890 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G018890
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionATP synthase epsilon chain
Locationchr05 : 26046406 .. 26049209 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTTATCTATGAGGCTCAGATCCACAGTAGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGCGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCCCTTTTCTCTCTGCAAGGACAAGATCCTTCTCCACCGATCTGCCGGCCGCCTCTTCCACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTATCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCCTATGCCTCCGAACTCTCTGCCAAAGAGGTGCGTCTTCTAATTTTGTTTTGCTGCTGATTTTGTGTATGTCAGATGTTGAATCTTGTGTGTGATTATGAATTTTTTCTGCGTTTGATTTGATTTGATCTTCTGTGAATTTTTCATTTTCGTGTTTTTATTTGTTATTGGATTAATTCCTAGTACCAATATTGATGTAAAACTATGAGGCATCCATTTCTATGAATCAAATGTTTGGGGGAAATGATCGACGTAAACTTAACATTTCGATTCCGTGGTAACAAATGCTGAACTAGAAATGAATTTTATCGGACTGAGGTCGTTTATTTTATTATTTACACTCGATATGAGAGATGAATTTCTGTACATAATCAGTGCGGGTCATAGATTTAATTTTCTTGTTTTCGTTTTGAATTTGCTATTTGGCATTCATTTCCTCATACTGATCCGATCACACTGGGGGATGTTTGGCGTTCTCTTTTCATATTCATAGACATAGTGATGCGAAGATCAGATCATACGAATACTGTAAATGTCATGTTCTTCCCTCATGGTCAAGGACCCTCTAAGTATTGTTGATATGCAGTGCTGAGAAATGCTTAATCTGCTTATCTAGTATCGTAGGTCTGGTTTCCAATGCTGTCATATCAGTAATATTAAGAATTAGACCAAGCTCTGCTGATAAATTATGGTGGCGTTTTCAGGCTTCATTCATGTTATCATCAATTCTTTGTGAAGTTTAATTTTTGTTTCGCGGTTCCCCGCATCCTGAATCCTATTCCACAACCGTCCACGTTTCCCAGTTGCTGTTGTTTTCTAAATCCCATGCCAGGTATTTGGTGCTTAGTTTAATGGGGAAATATCTACACATTCTATTATCTTCATTAAAAATCCAAAAGAGGCTACTAGTGATAAGAACCCTGTTCATTAATGCCTTCTTTTTCCCGTTTCTCGGTTATAAACATTTTAGTAGCAAAAGAACGTGTACAAAAGAAATGACGATCAAAGGGATACCAAGTATAAAAGAGATTGGAGACCTCCAATTAGTTTGGATAACTAAGGGAAGGGAGAATTACTACAAAAGAATTTAGTGGCAAAATTCCATCTAGAAGCTAGAAACAAAGTCTCACCAGCTATTCCCTTCTTAAAAGATTATTTGGTTTTTACCATCCCCCAACCCATTAAGTAGTGAGTGCTACATTTAAATAGATATGAGGTGGTAAAAAAGAAAAGTATGTTGTCTCTAAACTTCGGCTGCCAGAACTCAGAAGTTACTCAAAGTTTATTGTGAACATGTCTGCATCAATTGGTCATATTCTTCATTTCCCTTCTCTATCTGATGAGAGGCTAAAATTTTTCTCAAATTCAACTTCGTTTTTCTATTAACTGCTAGAAAGACATAGTTGTAGACTCTAATGGGTCAAAGGTTATACACCTGCGAGATTTATCTCAGACATGCTATGATTAAAGATGCGAATTGCAATGGAACCCAAATTTTGCGGTCAGATTTTTTATTGCTCTTCCTTCAAGATTTTCTTTTCCCACCATTATGAACAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCAACAATCGCAGAGTTGAAGCCAGGGGTTTTATCAGTACACGAAGGGACTGACATCAAAAAATACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTATGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCCAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCGACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAGTTTCCTCGGCTCTCAAATTGGCCACCCTTCTGTTTATCTATTTCCAATTGTATGTTCCTTCATAACACTGCCTCATTGACAGTTTGAATTGTCTTCTTTGGTGGAAATACCCTCTGGAACATCATCTTGGGGCTTACCTTTCTTGTGTTGAATTTGAAGTCATTCACAAATAAATATATTAGGATGGTTTTTTGCTTGGCCTCGTAGCTGGTCATAATCTGTTGCCACCAAACCTCACAAACAAGGGAAATTTTTCATTTGAATCTGTATGAATGATTCAAATCATGTCTCATTTGAGAACAATTTTCAAAGGTAAGAATATTCTGAATCTATTTGTATTCCTCTTTTTTCTTTGGTAAAGGTTGAAGGCCATGCATCTTTAGTATTGTGATTGATCTTCCTATTGGTGAATTTGTAGGCTATTAATTTAGATGGTAATCTTTTTTTAAAAAAAAAGCTCTTTTTAATGATTTGTACATCAATTATGTAAATAACCAAATATGATATGGAGCATTGTT

mRNA sequence

GCCTTATCTATGAGGCTCAGATCCACAGTAGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGCGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCCCTTTTCTCTCTGCAAGGACAAGATCCTTCTCCACCGATCTGCCGGCCGCCTCTTCCACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTATCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCCTATGCCTCCGAACTCTCTGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCAACAATCGCAGAGTTGAAGCCAGGGGTTTTATCAGTACACGAAGGGACTGACATCAAAAAATACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTATGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCCAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCGACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAGTTTCCTCGGCTCTCAAATTGGCCACCCTTCTGTTTATCTATTTCCAATTGTATGTTCCTTCATAACACTGCCTCATTGACAGTTTGAATTGTCTTCTTTGGTGGAAATACCCTCTGGAACATCATCTTGGGGCTTACCTTTCTTGTGTTGAATTTGAAGTCATTCACAAATAAATATATTAGGATGGTTTTTTGCTTGGCCTCGTAGCTGGTCATAATCTGTTGCCACCAAACCTCACAAACAAGGGAAATTTTTCATTTGAATCTGTATGAATGATTCAAATCATGTCTCATTTGAGAACAATTTTCAAAGGTAAGAATATTCTGAATCTATTTGTATTCCTCTTTTTTCTTTGGTAAAGGTTGAAGGCCATGCATCTTTAGTATTGTGATTGATCTTCCTATTGGTGAATTTGTAGGCTATTAATTTAGATGGTAATCTTTTTTTAAAAAAAAAGCTCTTTTTAATGATTTGTACATCAATTATGTAAATAACCAAATATGATATGGAGCATTGTT

Coding sequence (CDS)

ATGAGGCTCAGATCCACAGTAGTTTCGGCAAATCCTCCATTTTCTCAGCTTCCAAACAGCGCCAGCGGAACCCTTCCACTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCTTTCTCTCTCCGCCATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCCCTTTTCTCTCTGCAAGGACAAGATCCTTCTCCACCGATCTGCCGGCCGCCTCTTCCACCGACGATGCCTTTGTCTCCGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTATCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCCTATGCCTCCGAACTCTCTGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCAACAATCGCAGAGTTGAAGCCAGGGGTTTTATCAGTACACGAAGGGACTGACATCAAAAAATACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTATGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCCAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCGACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG

Protein sequence

MRLRSTVVSANPPFSQLPNSASGTLPLLLLLLHLSPTLREPSDPLSLSAMFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG
Homology
[Close]
BLAST of Lsi05G018890 vs. Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.6e-84
Identity = 160/200 (80.00%), Postives = 178/200 (89.00%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           MFR +S LLAR       R FSTDLPA ++ D  FV AWKK+IPN+DPPKTP ++MAPRP
Sbjct: 1   MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
           ATPSSIPSKLTVNFVLPY+SEL+ KEVDMVIIPATTGQMGVLPGHVATIAELKPGV+SVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG D+ KYFVS GFAFIH NS+ADIIAVEAVP+D+IDA+ VQKGLAEFTQKLN+ASTD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]
BLAST of Lsi05G018890 vs. Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.1e-77
Identity = 152/205 (74.15%), Postives = 177/205 (86.34%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSAR-----TRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSF 109
           MF++AS LL+R   +A      TR+FST+LP  S+ D  FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELP--STLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 110 MAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPG 169
           M PRP+TPSSIP+KLTVNFVLPY SEL+ KEVDMVIIPA+TGQMGVLPGHV TIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 170 VLSVHEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSA 229
           ++SVHEGTD+KKYF+SSGFAF+H NS ADIIAVEAVP+D ID SQVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 230 STDLEKAEAQIGVDVHSALNSALTG 250
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

[Close]
BLAST of Lsi05G018890 vs. Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 8.0e-73
Identity = 150/202 (74.26%), Postives = 169/202 (83.66%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLS--ARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAP 109
           MFRRA+S     FLS  + TR FSTD+ A  +T+ +FV AW+KV PNIDPPKTPL F+  
Sbjct: 1   MFRRATST----FLSRASATRRFSTDV-ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKT 60

Query: 110 RPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLS 169
           RP  PS+IP+KLTVNFVLPY+S+L+AKEVD VIIPATTG+MGVLPGHVATIAELKPGVL+
Sbjct: 61  RPPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLT 120

Query: 170 VHEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTD 229
           V EGTD  KYFVSSGF FIH NS ADIIAVEAVPV+Q+D   VQKGL EFTQKLNSA+TD
Sbjct: 121 VQEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTD 180

Query: 230 LEKAEAQIGVDVHSALNSALTG 250
           LEK EAQIG+DV SALNSALTG
Sbjct: 181 LEKREAQIGIDVDSALNSALTG 197

[Close]
BLAST of Lsi05G018890 vs. Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-20
Identity = 55/136 (40.44%), Postives = 84/136 (61.76%), Query Frame = 1 

Query: 110 ATPSSIPSKL-TVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSV 169
           AT +S  S L T + + P+ +    K+  +V +P   G  GV   HV  IAELKPGV+ +
Sbjct: 27  ATEASATSDLLTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQI 86

Query: 170 -HEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTD 229
            HE  D++K+F+S GFAF++ ++   I  +EAVP+DQ+DA +V+ GLA +TQ  N A  +
Sbjct: 87  NHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEE 146

Query: 230 LEKAEAQIGVDVHSAL 244
             KA A IG++ +  +
Sbjct: 147 NAKAVALIGLETYQQM 162

[Close]
BLAST of Lsi05G018890 vs. Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.3e-17
Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 1 

Query: 113 SSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGT 172
           + I  KL ++  LP+ +  S+++V  V IPA +G MG+L  HV +I  L+PGV+ V E +
Sbjct: 26  AEISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDS 85

Query: 173 DIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAE 232
             +K+FVS GFA +H N+   I  VEA P++      ++  L E  +    + ++ +K E
Sbjct: 86  GSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKME 145

Query: 233 AQIGVDVHSALNSAL 248
           AQI  +V+ AL  AL
Sbjct: 146 AQIEAEVYEALQHAL 160

[Close]
BLAST of Lsi05G018890 vs. TrEMBL
Match: A0A0A0L7T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128910 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 7.2e-97
Identity = 189/200 (94.50%), Postives = 195/200 (97.50%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           MFRRAS+LLARPFLSARTRSFSTDLPAA S  DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG++IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDA+QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Lsi05G018890 vs. TrEMBL
Match: A0A061DUT8_THECC (ATPase, F1 complex, delta/epsilon subunit OS=Theobroma cacao GN=TCM_005791 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 167/200 (83.50%), Postives = 182/200 (91.00%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           M RRAS LLARP L+AR R FSTDLPAA + D  FV AWKKVIPN+DPPKTPLSFM PRP
Sbjct: 1   MLRRASGLLARPILAARARPFSTDLPAAQTADATFVEAWKKVIPNMDPPKTPLSFMQPRP 60

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
            TPSSIPSKLTVNFVLPYASEL+ KEVDMVI+PATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  PTPSSIPSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG ++ KYF+SSGFAFIH NS+AD+IAVEAVP+D+IDAS VQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNEVTKYFISSGFAFIHANSFADVIAVEAVPLDRIDASLVQKGLAEFTQKLSSATTDLE 180

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIG+DVHSALNS LTG
Sbjct: 181 KAEAQIGIDVHSALNSTLTG 200

[Close]
BLAST of Lsi05G018890 vs. TrEMBL
Match: A0A067KAQ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14670 PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.7e-86
Identity = 169/200 (84.50%), Postives = 180/200 (90.00%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           M RRA+  LARP L  R R FSTDL AA +TD  FV AWKKVIPN++PPKTPLSFM PRP
Sbjct: 55  MLRRATGFLARPILCGRARPFSTDLHAAQTTDSGFVEAWKKVIPNMEPPKTPLSFMQPRP 114

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
            TPSSIPSKLTVNFVLPYASELS KE DMVIIPATTGQMGVLPGHV+TIAELKPGVLSVH
Sbjct: 115 PTPSSIPSKLTVNFVLPYASELSNKEADMVIIPATTGQMGVLPGHVSTIAELKPGVLSVH 174

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG ++ KYFVSSGFAFIH NS+ADIIAVEAVPVDQIDA+QVQKGLAEFTQKL+SASTDLE
Sbjct: 175 EGNEVTKYFVSSGFAFIHANSFADIIAVEAVPVDQIDANQVQKGLAEFTQKLSSASTDLE 234

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIGVDVHSALN+ALTG
Sbjct: 235 KAEAQIGVDVHSALNAALTG 254

[Close]
BLAST of Lsi05G018890 vs. TrEMBL
Match: D7SM33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.6e-83
Identity = 165/206 (80.10%), Postives = 181/206 (87.86%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLS------ARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLS 109
           M R+A+ LLARP ++      AR RSFSTDLP A + D  F+ AWKK+IPNIDPP TPL+
Sbjct: 1   MLRQATRLLARPAIASSSSFAARARSFSTDLPTAPAEDSTFIDAWKKIIPNIDPPATPLT 60

Query: 110 FMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 169
           FM PRP TPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP
Sbjct: 61  FMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120

Query: 170 GVLSVHEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNS 229
           GV+SVHEG D+ KYF+SSGFA IH NS+ADIIA+EAVP+DQID S VQKGLA+FTQKL+S
Sbjct: 121 GVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSS 180

Query: 230 ASTDLEKAEAQIGVDVHSALNSALTG 250
           ASTDLEKAEAQIGVDVHSALNSALTG
Sbjct: 181 ASTDLEKAEAQIGVDVHSALNSALTG 206

[Close]
BLAST of Lsi05G018890 vs. TrEMBL
Match: A5C7J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044183 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.0e-83
Identity = 165/206 (80.10%), Postives = 181/206 (87.86%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLS------ARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLS 109
           M R+A+ LLARP ++      AR R FSTDLPAA + D  F+ AWKK+IPNIDPP TPL+
Sbjct: 1   MLRQATRLLARPAIASSSSFAARARPFSTDLPAAPAEDSTFIDAWKKIIPNIDPPATPLT 60

Query: 110 FMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 169
           FM PRP TPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP
Sbjct: 61  FMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120

Query: 170 GVLSVHEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNS 229
           GV+SVHEG D+ KYF+SSGFA IH NS+ADIIA+EAVP+DQID S VQKGLA+FTQKL+S
Sbjct: 121 GVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSS 180

Query: 230 ASTDLEKAEAQIGVDVHSALNSALTG 250
           ASTDLEKAEAQIGVDVHSALNSALTG
Sbjct: 181 ASTDLEKAEAQIGVDVHSALNSALTG 206

[Close]
BLAST of Lsi05G018890 vs. TAIR10
Match: AT5G47030.1 (AT5G47030.1 ATPase, F1 complex, delta/epsilon subunit)

HSP 1 Score: 291.2 bits (744), Expect = 6.1e-79
Identity = 152/205 (74.15%), Postives = 177/205 (86.34%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSAR-----TRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSF 109
           MF++AS LL+R   +A      TR+FST+LP  S+ D  FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELP--STLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 110 MAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPG 169
           M PRP+TPSSIP+KLTVNFVLPY SEL+ KEVDMVIIPA+TGQMGVLPGHV TIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 170 VLSVHEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSA 229
           ++SVHEGTD+KKYF+SSGFAF+H NS ADIIAVEAVP+D ID SQVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 230 STDLEKAEAQIGVDVHSALNSALTG 250
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

[Close]
BLAST of Lsi05G018890 vs. NCBI nr
Match: gi|659075690|ref|XP_008438277.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 9.4e-98
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           MFRRAS+LLARPFLSARTRSFS+DLPAA ST+DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
           ATPSSIPSKLTVN VLPY+SELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG+DIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDA+QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Lsi05G018890 vs. NCBI nr
Match: gi|449432356|ref|XP_004133965.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus])

HSP 1 Score: 361.7 bits (927), Expect = 1.0e-96
Identity = 189/200 (94.50%), Postives = 195/200 (97.50%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           MFRRAS+LLARPFLSARTRSFSTDLPAA S  DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG++IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDA+QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Lsi05G018890 vs. NCBI nr
Match: gi|1009159533|ref|XP_015897863.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba])

HSP 1 Score: 331.6 bits (849), Expect = 1.1e-87
Identity = 175/201 (87.06%), Postives = 183/201 (91.04%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSA-RTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPR 109
           MFRR +SLLARP +SA R RSFSTDLPA  + D AFV AWKKV+PN DPPKTPL+FM PR
Sbjct: 1   MFRRVTSLLARPIISAGRARSFSTDLPANPTADSAFVDAWKKVVPNTDPPKTPLAFMKPR 60

Query: 110 PATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSV 169
           P TPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTG MGVLPGHVATIAELKPGVLSV
Sbjct: 61  PPTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSV 120

Query: 170 HEGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDL 229
           HEG D  KYF+SSGFAFIH NSYADIIAVEAVP+DQIDAS VQKGLAEFTQKL+SASTDL
Sbjct: 121 HEGNDTTKYFISSGFAFIHANSYADIIAVEAVPLDQIDASLVQKGLAEFTQKLSSASTDL 180

Query: 230 EKAEAQIGVDVHSALNSALTG 250
           EKAEAQIGVDVHSALNSALTG
Sbjct: 181 EKAEAQIGVDVHSALNSALTG 201

[Close]
BLAST of Lsi05G018890 vs. NCBI nr
Match: gi|1012234748|ref|XP_015939350.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis duranensis])

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86
Identity = 169/200 (84.50%), Postives = 183/200 (91.50%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           MFRRAS+LL RP + A +R FSTDLPAA+  D +FV AWKKV PN+DPPKTPL++M PRP
Sbjct: 1   MFRRASTLLRRPLMGATSRRFSTDLPAAAVEDSSFVEAWKKVSPNVDPPKTPLAYMKPRP 60

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
           ATPSS+PSKLTVNFVLPYASELSAKEVDMVI+PATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSLPSKLTVNFVLPYASELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG D+ KYFVSSGFAFIH NS ADIIAVEAVPVD+IDA+ VQKGL EFTQKLNSA+TDLE
Sbjct: 121 EGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQEFTQKLNSATTDLE 180

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Lsi05G018890 vs. NCBI nr
Match: gi|590724229|ref|XP_007052407.1| (ATPase, F1 complex, delta/epsilon subunit [Theobroma cacao])

HSP 1 Score: 327.8 bits (839), Expect = 1.7e-86
Identity = 167/200 (83.50%), Postives = 182/200 (91.00%), Query Frame = 1 

Query: 50  MFRRASSLLARPFLSARTRSFSTDLPAASSTDDAFVSAWKKVIPNIDPPKTPLSFMAPRP 109
           M RRAS LLARP L+AR R FSTDLPAA + D  FV AWKKVIPN+DPPKTPLSFM PRP
Sbjct: 1   MLRRASGLLARPILAARARPFSTDLPAAQTADATFVEAWKKVIPNMDPPKTPLSFMQPRP 60

Query: 110 ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 169
            TPSSIPSKLTVNFVLPYASEL+ KEVDMVI+PATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  PTPSSIPSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 170 EGTDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLE 229
           EG ++ KYF+SSGFAFIH NS+AD+IAVEAVP+D+IDAS VQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNEVTKYFISSGFAFIHANSFADVIAVEAVPLDRIDASLVQKGLAEFTQKLSSATTDLE 180

Query: 230 KAEAQIGVDVHSALNSALTG 250
           KAEAQIG+DVHSALNS LTG
Sbjct: 181 KAEAQIGIDVHSALNSTLTG 200

The following BLAST results are available for this feature:
BLAST of Lsi05G018890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATP4_IPOBA2.6e-8480.00ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1[more]
ATP4_ARATH1.1e-7774.15ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 ... [more]
ATP4_PEA8.0e-7374.26ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1[more]
ATPD_DICDI2.7e-2040.44ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D P... [more]
ATPD_AGABI1.3e-1737.04ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1[more]
BLAST of Lsi05G018890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7T8_CUCSA7.2e-9794.50Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128910 PE=3 SV=1[more]
A0A061DUT8_THECC1.2e-8683.50ATPase, F1 complex, delta/epsilon subunit OS=Theobroma cacao GN=TCM_005791 PE=3 ... [more]
A0A067KAQ2_JATCU5.7e-8684.50Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14670 PE=3 SV=1[more]
D7SM33_VITVI1.6e-8380.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=... [more]
A5C7J7_VITVI2.0e-8380.10Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044183 PE=3 SV=1[more]
BLAST of Lsi05G018890 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47030.16.1e-7974.15 ATPase, F1 complex, delta/epsilon subunit[more]
BLAST of Lsi05G018890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075690|ref|XP_008438277.1|9.4e-9895.50PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo][more]
gi|449432356|ref|XP_004133965.1|1.0e-9694.50PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus][more]
gi|1009159533|ref|XP_015897863.1|1.1e-8787.06PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba][more]
gi|1012234748|ref|XP_015939350.1|1.3e-8684.50PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis duranensis][more]
gi|590724229|ref|XP_007052407.1|1.7e-8683.50ATPase, F1 complex, delta/epsilon subunit [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0046961proton-transporting ATPase activity, rotational mechanism
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
Vocabulary: INTERPRO
TermDefinition
IPR020546ATP_synth_F1_dsu/esu_N
IPR001469ATP_synth_F1_dsu/esu
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0009060 aerobic respiration
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0051788 response to misfolded protein
biological_process GO:0046686 response to cadmium ion
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
biological_process GO:0006950 response to stress
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0042221 response to chemical
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0046496 nicotinamide nucleotide metabolic process
biological_process GO:0016043 cellular component organization
biological_process GO:0006833 water transport
cellular_component GO:0005753 mitochondrial proton-transporting ATP synthase complex
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G018890.1Lsi05G018890.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001469ATPase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 117..237
score: 14
IPR001469ATPase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 51..247
score: 1.4E
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPRODOMPD000944coord: 124..205
score: 3.0
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalGENE3DG3DSA:2.60.15.10coord: 108..205
score: 8.8
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 119..190
score: 1.2
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalunknownSSF51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 119..200
score: 5.1
NoneNo IPR availableunknownCoilCoilcoord: 214..234
scor
NoneNo IPR availableGENE3DG3DSA:1.20.5.440coord: 206..247
score: 1.
NoneNo IPR availablePANTHERPTHR13822:SF7ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIALcoord: 51..247
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G018890Csa3G128910Cucumber (Chinese Long) v2culsiB209
Lsi05G018890CSPI03G10320Wild cucumber (PI 183967)cpilsiB207
Lsi05G018890Cucsa.256900Cucumber (Gy14) v1cgylsiB415
Lsi05G018890CmaCh00G004660Cucurbita maxima (Rimu)cmalsiB008
Lsi05G018890CmaCh14G019320Cucurbita maxima (Rimu)cmalsiB245
Lsi05G018890CmaCh06G011780Cucurbita maxima (Rimu)cmalsiB764
Lsi05G018890CmoCh14G019870Cucurbita moschata (Rifu)cmolsiB233
Lsi05G018890CmoCh06G012170Cucurbita moschata (Rifu)cmolsiB757
Lsi05G018890Cla021378Watermelon (97103) v1lsiwmB365
Lsi05G018890MELO3C006270Melon (DHL92) v3.5.1lsimeB378
Lsi05G018890ClCG05G002910Watermelon (Charleston Gray)lsiwcgB335
Lsi05G018890MELO3C006270.2Melon (DHL92) v3.6.1lsimedB396
Lsi05G018890Cla97C05G083500Watermelon (97103) v2lsiwmbB333
Lsi05G018890Bhi01G000117Wax gourdlsiwgoB445
Lsi05G018890Cp4.1LG08g02460Cucurbita pepo (Zucchini)cpelsiB714
Lsi05G018890Cp4.1LG03g17580Cucurbita pepo (Zucchini)cpelsiB506
Lsi05G018890CsGy3G010430Cucumber (Gy14) v2cgyblsiB196
Lsi05G018890Carg14891Silver-seed gourdcarlsiB565
Lsi05G018890Carg06329Silver-seed gourdcarlsiB878
Lsi05G018890CsaV3_3G010470Cucumber (Chinese Long) v3cuclsiB228
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G018890Silver-seed gourdcarlsiB206
Lsi05G018890Silver-seed gourdcarlsiB983
Lsi05G018890Cucumber (Chinese Long) v3cuclsiB241
Lsi05G018890Cucumber (Chinese Long) v3cuclsiB244
Lsi05G018890Bottle gourd (USVL1VR-Ls)lsilsiB159
Lsi05G018890Cucumber (Gy14) v1cgylsiB508
Lsi05G018890Cucurbita maxima (Rimu)cmalsiB356
Lsi05G018890Cucurbita moschata (Rifu)cmolsiB345
Lsi05G018890Cucurbita moschata (Rifu)cmolsiB564
Lsi05G018890Cucurbita pepo (Zucchini)cpelsiB122
Lsi05G018890Wild cucumber (PI 183967)cpilsiB221
Lsi05G018890Cucumber (Chinese Long) v2culsiB224
Lsi05G018890Cucumber (Gy14) v2cgyblsiB210