CmoCh06G012170 (gene) Cucurbita moschata (Rifu)

NameCmoCh06G012170
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionATP synthase epsilon chain, sodium ion specific
LocationCmo_Chr06 : 9257345 .. 9260796 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCCGATTCCTCCATTTTCTCAGCTTCCAAACAGCACCAGCGGAACCCTTTCACTTCTCCTTCTTCTTCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCCCTCCAGTCTCCGCCATGTTCCGACGAGCTTCCACCCTTTTGACCCGGCCTCTTCTCTCTGCAAGGGCTAGATCCTTCTCCGCCGATCTGCCGGCGGCTTCTTCAACTGACGATGCCTTTGTCGCTGCCTGGAAGAAGGCGATCCCCACTATTGATCCTCCTAGAACTCCTCTCTTTTTCATGGCTCCTCGTCCTGCTACGCCGTCTTCCATCCCTACTAAGCTCACTGTCAACTTTGTTCTTCCTTATGCCTCCGAGCTCTCGGCCAAAGAGGTTAGTCTTTCGAATTTTGTTTTGCCTGGTGATTTTTTTTATTTTGTGTACCAGGCGTTGAATCTTGTGTATGATTTTCAATTTTTTGATGCATTTGATTTGATTTGATTTTTTTGTGGATTTTTTTTTATATGTTTTTATTGACTCTTGGATTAACCTTCTGTCGGCTAATTTTGATGGAAAATCGTGACTTGTTCATTGTTTCGAACCTTCGTAATTAATACAATCGGATGTTTAGAGAAAAATAATGGACGTAAATTAGCATTTCGTGTCCATGGTTACGAATGCTGGACTCGAAATTGATTTTAAACGAGTGCGGGAAGCTGTTACTTTATTTTTTCCTCTGGATATGAAAGATGAATTCCTTCAATTCATCAGTACGTTTCATAGATTTGATTTTTCTTGTTTTTTTTTTTTTTATCTTTGGCATTCATTTCCTTATACTATCTTTTCACGCTGGAGGAAATTCGACGTTTTCTTTTCATATTCATGGACATGTTGATGATCAGATCAAATTATATAATCTCTGTAAATGTCATGTTCTTTGCTTATGGTCAAGGAGTCTCTAAGTGCTGTTGATATGCAGTATCAAGAACTGCTAAATCAGCGCGTAGGCTTGTCGTATCCAATGCTGTTATATCAGCAAAATCCTGATAAATTAAGGCGGCATTTTCATTCATCTGTTCATATTATCATCAATTCTTTAAAAGGTTTATATTCATGGACATGTTGATGATCAGATCAAATTGTATAATCTCTGTAAATGTCATGTTCTTTGCTCATGGTCAAGGAGTCTCTAAGTGCTGTTGATATGCAGTATCAAGAACTGCTAAATCTGCGTATCTGTAGCGTAGGCTTGTCGTATCCAATGCTGTTATATCAGCAAAATCCTGATAAATTAAGGCGGCATTTTCATTCATCTGTTCATATTATCATCAGTTCTTAAAGGGTTTATATTTGTTTCTTAGCTCATCCAGAATCCTATGCCGCAACTGTCCACTTATACCGGTGGCTGTTGTTTTCTATATCCCAGCCCCAGGTCCTTGTGCTTAGTTTAAAGAGGGAAGATCCTCTAATGGGTACTTACTTATTCGATTCTCTTCGGTATTGAAAATTCAAAAGGGGCTACTGGTGAAGAGAACCCTGTTCATTAACGCCTTCTATTCTTCCTTTTTTGGTTTAGAACACATATTAGCAAAAGAACATGTACAAAGAGATGAGGATAAAAGGGAGATCAGATATTACATGCCTCTACTAGTTTGAATAACTAACTATAAAAGAATACAGAGGGAAAGTCTCCTAGGGAGAATTGGCCCACCATTTTTCCCCTTTTCTTCTTCTTTTTGGATCGTAACTTAGCGTGAGCAAATCTTCTAGAGAGCGTGCCCAAAATAATATTCCAAAGCTTTTTTTAGACTTGCTTCATAGAAGGACACCTTTCCGTGTTTAGAGAGTCAACTCTGTCCTCTCCAATTCCATTTCCATTGGCGAGAGAAACTTTGGGCCGAGCCACGAAAAAAATATATGAAAGACAATAATCAGATTTGTGGATTTTAGTAGGATTTATTCTCATGATGTAGAAATAAGAAAACCAGGAACAGGGTCAACGATCACTCACGTCATGGGCTGGCAAGAACTCAAGACAATTCTCACGAAACTCTTTCCTCTACGCTTCTTGGGGATTTCTTCTCTTCAATAAAAAGGAACTCTTTGGAGAGAATTCCCCTTACTCGACTTCCAAGACTACAAACAAAATCATACCGATTTATCCATTTTCCAATTTTTCCTTAAAGATTCTTTGGGTATATACACATTGCTCAACCTCGAGCTGCTAGAAGTTACTTGAGCTGCTACAGTTAAATAGATAAGTTACTCAGAGCACAGTTAAATAGATAAGAGGCAAAAAAGAAACCTCGAGCTGCTAGTGAATGCTACAGTTAAATAGATAAGAGGCAAAAAAGAAAAGTATGTTGTCTGTAAACTCGAGCTGCTAGAAGTTACTCAGAGTTTATGCTTCCAAGTTTATTATGAACCTAGTGCACCGATTCGATTTATTCTTCATTTTTCTTCTCTTACTGATGAGAGGCTATTTCAAATTCACTTCAATTGTTCTGTTTTGGGCTCATGAACACTCTTTATCACAGACGTTGCTATGATTAAGGATACAAATTGCAATGGAACCCAAAGTTTTGAGTCAGATTATTCATTGCTCTTCTTTAAAAGTCTTTGTTCTTCCCCCCCATTCCGAACAGGTTGACATGGTAATAATTCCAGCCACAACTGGGCAAATGGGTGTTCTTCCCGGCCATGTAGCTACAATCGCAGAGTTGAAACCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTACGCTGACATAATCGCCGTGGAAGCTGTGCCTGTAGACCAAATCGACCCCGACCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAACGCTGCCCTTACAGGATAGTTTCCTCGACTCGCAAATCGGCCACCTTTCTGTTTATCTATTTCCAATTGTTCGTTGCTTCATAACACTGCCTCATTGTGACAGTTCGAGTTAGCCTTCCTCGGTCGAAATACCTACTGGGAAACACATCATCTTGGGCTTACCCTTTCTGTGTTGAATTTCAAGTCATTCACAAATAAATATATTAGGGATGGATTTTTGCTTGGCCTTATTGGTCATAATCTGGTGGCGTAGACCTCATAAACATGGAAGAATTCTCATTTGAATCTGTATGGATATGATTTAATTCATCTTGCATTTGTTAACAATTTCACAAAAATATGGGCCAAATGGGCTTCTTCCTCTTGGGCTTTCCCCGGGCCCACTCACTATGAACTCGGAACTGGGCTTCACGTCCATTGTGCCACTCGGGCCCATCAATTCACAGACAAAATTGTTTTCAGTCACGTGTTTATAAATGAAACCCGACCAGATCTTCA

mRNA sequence

GAGCCGATTCCTCCATTTTCTCAGCTTCCAAACAGCACCAGCGGAACCCTTTCACTTCTCCTTCTTCTTCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCCCTCCAGTCTCCGCCATGTTCCGACGAGCTTCCACCCTTTTGACCCGGCCTCTTCTCTCTGCAAGGGCTAGATCCTTCTCCGCCGATCTGCCGGCGGCTTCTTCAACTGACGATGCCTTTGTCGCTGCCTGGAAGAAGGCGATCCCCACTATTGATCCTCCTAGAACTCCTCTCTTTTTCATGGCTCCTCGTCCTGCTACGCCGTCTTCCATCCCTACTAAGCTCACTGTCAACTTTGTTCTTCCTTATGCCTCCGAGCTCTCGGCCAAAGAGGTTGACATGGTAATAATTCCAGCCACAACTGGGCAAATGGGTGTTCTTCCCGGCCATGTAGCTACAATCGCAGAGTTGAAACCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTACGCTGACATAATCGCCGTGGAAGCTGTGCCTGTAGACCAAATCGACCCCGACCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAACGCTGCCCTTACAGGATAGTTTCCTCGACTCGCAAATCGGCCACCTTTCTGTTTATCTATTTCCAATTGTTCGTTGCTTCATAACACTGCCTCATTGTGACAGTTCGAGTTAGCCTTCCTCGGTCGAAATACCTACTGGGAAACACATCATCTTGGGCTTACCCTTTCTGTGTTGAATTTCAAGTCATTCACAAATAAATATATTAGGGATGGATTTTTGCTTGGCCTTATTGGTCATAATCTGGTGGCGTAGACCTCATAAACATGGAAGAATTCTCATTTGAATCTGTATGGATATGATTTAATTCATCTTGCATTTGTTAACAATTTCACAAAAATATGGGCCAAATGGGCTTCTTCCTCTTGGGCTTTCCCCGGGCCCACTCACTATGAACTCGGAACTGGGCTTCACGTCCATTGTGCCACTCGGGCCCATCAATTCACAGACAAAATTGTTTTCAGTCACGTGTTTATAAATGAAACCCGACCAGATCTTCA

Coding sequence (CDS)

ATGTTCCGACGAGCTTCCACCCTTTTGACCCGGCCTCTTCTCTCTGCAAGGGCTAGATCCTTCTCCGCCGATCTGCCGGCGGCTTCTTCAACTGACGATGCCTTTGTCGCTGCCTGGAAGAAGGCGATCCCCACTATTGATCCTCCTAGAACTCCTCTCTTTTTCATGGCTCCTCGTCCTGCTACGCCGTCTTCCATCCCTACTAAGCTCACTGTCAACTTTGTTCTTCCTTATGCCTCCGAGCTCTCGGCCAAAGAGGTTGACATGGTAATAATTCCAGCCACAACTGGGCAAATGGGTGTTCTTCCCGGCCATGTAGCTACAATCGCAGAGTTGAAACCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTACGCTGACATAATCGCCGTGGAAGCTGTGCCTGTAGACCAAATCGACCCCGACCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAACGCTGCCCTTACAGGATAG
BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-80
Identity = 155/200 (77.50%), Postives = 172/200 (86.00%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           MFR +S LL R       R FS DLPA ++ D  FV AWKK IP +DPP+TP  +MAPRP
Sbjct: 1   MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATPSSIP+KLTVNFVLPY+SEL+ KEVDMVIIPATTGQMGVLPGHVATIAELKPGV+SVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EG+D  KYFVS GFAFIH NS+ADIIAVEAVP+D+ID + VQKGLAEFTQKLN+ASTD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIGVDVHSALNAALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.1e-75
Identity = 149/205 (72.68%), Postives = 173/205 (84.39%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARS-----FSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFF 60
           MF++AS LL+R + +A ++S     FS +LP  S+ D  FV AWKK  P +DPP+TP  F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELP--STLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPG 120
           M PRP+TPSSIPTKLTVNFVLPY SEL+ KEVDMVIIPA+TGQMGVLPGHV TIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSA 180
           ++SVHEG+D KKYF+SSGFAF+H NS ADIIAVEAVP+D IDP QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNAALTG 201
           +TDLEKAEAQIGV+VHSA+NAAL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.8e-71
Identity = 146/201 (72.64%), Postives = 168/201 (83.58%), Query Frame = 1

Query: 1   MFRRA-STLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPR 60
           MFRRA ST L+R   ++  R FS D+ A  +T+ +FV AW+K  P IDPP+TPL F+  R
Sbjct: 1   MFRRATSTFLSR---ASATRRFSTDV-ATPATNSSFVEAWRKVSPNIDPPKTPLEFLKTR 60

Query: 61  PATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSV 120
           P  PS+IPTKLTVNFVLPY+S+L+AKEVD VIIPATTG+MGVLPGHVATIAELKPGVL+V
Sbjct: 61  PPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTV 120

Query: 121 HEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDL 180
            EG+DT KYFVSSGF FIH NS ADIIAVEAVPV+Q+D D VQKGL EFTQKLNSA+TDL
Sbjct: 121 QEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL 180

Query: 181 EKAEAQIGVDVHSALNAALTG 201
           EK EAQIG+DV SALN+ALTG
Sbjct: 181 EKREAQIGIDVDSALNSALTG 197

BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-20
Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = 1

Query: 70  LTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSV-HEGSDTKKY 129
           LT + + P+ +    K+  +V +P   G  GV   HV  IAELKPGV+ + HE  D +K+
Sbjct: 37  LTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKF 96

Query: 130 FVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLEKAEAQIGV 189
           F+S GFAF++ ++   I  +EAVP+DQ+D ++V+ GLA +TQ  N A  +  KA A IG+
Sbjct: 97  FISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGL 156

Query: 190 DVHSAL 195
           + +  +
Sbjct: 157 ETYQQM 162

BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATPD_KLULA (ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ATP16 PE=3 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = 1

Query: 70  LTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYF 129
           L + F LP+ +  S   V  V +PA +GQ+G+L  HV T+ +L PGV+ V EGS +KK+F
Sbjct: 31  LKLQFALPHQTLFSGTPVTQVNLPAKSGQIGILANHVPTVEQLVPGVVEVLEGSSSKKFF 90

Query: 130 VSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLEKAEAQIGVD 189
           VS GFA +  +S   I +VEA P++   P+ V+  LAE  QK  S++ ++  AEA I ++
Sbjct: 91  VSGGFATVQPDSTLAITSVEAFPLESFSPENVRSLLAE-AQKNVSSADEVAAAEAAIQLE 150

Query: 190 VHSALNAAL 199
           V  AL AAL
Sbjct: 151 VLEALQAAL 158

BLAST of CmoCh06G012170 vs. TrEMBL
Match: A0A0A0L7T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128910 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-90
Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           MFRRASTLL RP LSAR RSFS DLPAA S  DAFV+AWKK IP IDPP+TPL FMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATPSSIP+KLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EGS+ KKYFVSSGFAFIHGNSYADIIAVEAVP++QID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CmoCh06G012170 vs. TrEMBL
Match: A0A067KAQ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14670 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 4.0e-82
Identity = 163/200 (81.50%), Postives = 176/200 (88.00%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           M RRA+  L RP+L  RAR FS DL AA +TD  FV AWKK IP ++PP+TPL FM PRP
Sbjct: 55  MLRRATGFLARPILCGRARPFSTDLHAAQTTDSGFVEAWKKVIPNMEPPKTPLSFMQPRP 114

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
            TPSSIP+KLTVNFVLPYASELS KE DMVIIPATTGQMGVLPGHV+TIAELKPGVLSVH
Sbjct: 115 PTPSSIPSKLTVNFVLPYASELSNKEADMVIIPATTGQMGVLPGHVSTIAELKPGVLSVH 174

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EG++  KYFVSSGFAFIH NS+ADIIAVEAVPVDQID +QVQKGLAEFTQKL+SASTDLE
Sbjct: 175 EGNEVTKYFVSSGFAFIHANSFADIIAVEAVPVDQIDANQVQKGLAEFTQKLSSASTDLE 234

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIGVDVHSALNAALTG
Sbjct: 235 KAEAQIGVDVHSALNAALTG 254

BLAST of CmoCh06G012170 vs. TrEMBL
Match: A0A061DUT8_THECC (ATPase, F1 complex, delta/epsilon subunit OS=Theobroma cacao GN=TCM_005791 PE=3 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.2e-81
Identity = 158/200 (79.00%), Postives = 177/200 (88.50%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           M RRAS LL RP+L+ARAR FS DLPAA + D  FV AWKK IP +DPP+TPL FM PRP
Sbjct: 1   MLRRASGLLARPILAARARPFSTDLPAAQTADATFVEAWKKVIPNMDPPKTPLSFMQPRP 60

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
            TPSSIP+KLTVNFVLPYASEL+ KEVDMVI+PATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  PTPSSIPSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EG++  KYF+SSGFAFIH NS+AD+IAVEAVP+D+ID   VQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNEVTKYFISSGFAFIHANSFADVIAVEAVPLDRIDASLVQKGLAEFTQKLSSATTDLE 180

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIG+DVHSALN+ LTG
Sbjct: 181 KAEAQIGIDVHSALNSTLTG 200

BLAST of CmoCh06G012170 vs. TrEMBL
Match: D7SM33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 9.9e-81
Identity = 161/206 (78.16%), Postives = 177/206 (85.92%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLS------ARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLF 60
           M R+A+ LL RP ++      ARARSFS DLP A + D  F+ AWKK IP IDPP TPL 
Sbjct: 1   MLRQATRLLARPAIASSSSFAARARSFSTDLPTAPAEDSTFIDAWKKIIPNIDPPATPLT 60

Query: 61  FMAPRPATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120
           FM PRP TPSSIP+KLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP
Sbjct: 61  FMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120

Query: 121 GVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNS 180
           GV+SVHEG+D  KYF+SSGFA IH NS+ADIIA+EAVP+DQIDP  VQKGLA+FTQKL+S
Sbjct: 121 GVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSS 180

Query: 181 ASTDLEKAEAQIGVDVHSALNAALTG 201
           ASTDLEKAEAQIGVDVHSALN+ALTG
Sbjct: 181 ASTDLEKAEAQIGVDVHSALNSALTG 206

BLAST of CmoCh06G012170 vs. TrEMBL
Match: A5C7J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044183 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.3e-80
Identity = 161/206 (78.16%), Postives = 177/206 (85.92%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLS------ARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLF 60
           M R+A+ LL RP ++      ARAR FS DLPAA + D  F+ AWKK IP IDPP TPL 
Sbjct: 1   MLRQATRLLARPAIASSSSFAARARPFSTDLPAAPAEDSTFIDAWKKIIPNIDPPATPLT 60

Query: 61  FMAPRPATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120
           FM PRP TPSSIP+KLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP
Sbjct: 61  FMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120

Query: 121 GVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNS 180
           GV+SVHEG+D  KYF+SSGFA IH NS+ADIIA+EAVP+DQIDP  VQKGLA+FTQKL+S
Sbjct: 121 GVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSS 180

Query: 181 ASTDLEKAEAQIGVDVHSALNAALTG 201
           ASTDLEKAEAQIGVDVHSALN+ALTG
Sbjct: 181 ASTDLEKAEAQIGVDVHSALNSALTG 206

BLAST of CmoCh06G012170 vs. TAIR10
Match: AT5G47030.1 (AT5G47030.1 ATPase, F1 complex, delta/epsilon subunit)

HSP 1 Score: 284.3 bits (726), Expect = 6.0e-77
Identity = 149/205 (72.68%), Postives = 173/205 (84.39%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARS-----FSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFF 60
           MF++AS LL+R + +A ++S     FS +LP  S+ D  FV AWKK  P +DPP+TP  F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELP--STLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPG 120
           M PRP+TPSSIPTKLTVNFVLPY SEL+ KEVDMVIIPA+TGQMGVLPGHV TIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSA 180
           ++SVHEG+D KKYF+SSGFAF+H NS ADIIAVEAVP+D IDP QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNAALTG 201
           +TDLEKAEAQIGV+VHSA+NAAL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|659075690|ref|XP_008438277.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo])

HSP 1 Score: 345.5 bits (885), Expect = 6.2e-92
Identity = 181/200 (90.50%), Postives = 188/200 (94.00%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           MFRRASTLL RP LSAR RSFS+DLPAA ST+DAFV+AWKK IP IDPP+TPL FMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATPSSIP+KLTVN VLPY+SELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EGSD KKYFVSSGFAFIHGNSYADIIAVEAVPVDQID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|449432356|ref|XP_004133965.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 2.6e-90
Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           MFRRASTLL RP LSAR RSFS DLPAA S  DAFV+AWKK IP IDPP+TPL FMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATPSSIP+KLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EGS+ KKYFVSSGFAFIHGNSYADIIAVEAVP++QID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|1009159533|ref|XP_015897863.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba])

HSP 1 Score: 318.5 bits (815), Expect = 8.1e-84
Identity = 167/201 (83.08%), Postives = 180/201 (89.55%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSA-RARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPR 60
           MFRR ++LL RP++SA RARSFS DLPA  + D AFV AWKK +P  DPP+TPL FM PR
Sbjct: 1   MFRRVTSLLARPIISAGRARSFSTDLPANPTADSAFVDAWKKVVPNTDPPKTPLAFMKPR 60

Query: 61  PATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSV 120
           P TPSSIP+KLTVNFVLPYASELSAKEVDMVIIPATTG MGVLPGHVATIAELKPGVLSV
Sbjct: 61  PPTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSV 120

Query: 121 HEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDL 180
           HEG+DT KYF+SSGFAFIH NSYADIIAVEAVP+DQID   VQKGLAEFTQKL+SASTDL
Sbjct: 121 HEGNDTTKYFISSGFAFIHANSYADIIAVEAVPLDQIDASLVQKGLAEFTQKLSSASTDL 180

Query: 181 EKAEAQIGVDVHSALNAALTG 201
           EKAEAQIGVDVHSALN+ALTG
Sbjct: 181 EKAEAQIGVDVHSALNSALTG 201

BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|1012234748|ref|XP_015939350.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis duranensis])

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-83
Identity = 164/200 (82.00%), Postives = 179/200 (89.50%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           MFRRASTLL RPL+ A +R FS DLPAA+  D +FV AWKK  P +DPP+TPL +M PRP
Sbjct: 1   MFRRASTLLRRPLMGATSRRFSTDLPAAAVEDSSFVEAWKKVSPNVDPPKTPLAYMKPRP 60

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATPSS+P+KLTVNFVLPYASELSAKEVDMVI+PATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSLPSKLTVNFVLPYASELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EG+D  KYFVSSGFAFIH NS ADIIAVEAVPVD+ID + VQKGL EFTQKLNSA+TDLE
Sbjct: 121 EGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQEFTQKLNSATTDLE 180

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|1021567210|ref|XP_016174843.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis ipaensis])

HSP 1 Score: 314.7 bits (805), Expect = 1.2e-82
Identity = 162/200 (81.00%), Postives = 179/200 (89.50%), Query Frame = 1

Query: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPRTPLFFMAPRP 60
           MFRRA+TLL RPL+ A +R FS DLPAA+  D +FV AWKK  P +DPP+TPL +M PRP
Sbjct: 1   MFRRATTLLRRPLIGATSRRFSTDLPAAAVEDSSFVEAWKKVSPNVDPPKTPLAYMKPRP 60

Query: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120
           ATPSS+P+KLTVNFVLPYASELSAKEVDMVI+PATTGQMGVLPGHVATIAELKPGVLSVH
Sbjct: 61  ATPSSLPSKLTVNFVLPYASELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180
           EG+D  KYFVSSGFAFIH NS ADIIAVEAVPVD+ID + VQKGL +FTQKLNSA+TDLE
Sbjct: 121 EGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQDFTQKLNSATTDLE 180

Query: 181 KAEAQIGVDVHSALNAALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ATP4_IPOBA1.1e-8077.50ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1[more]
ATP4_ARATH1.1e-7572.68ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 ... [more]
ATP4_PEA7.8e-7172.64ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1[more]
ATPD_DICDI3.7e-2039.68ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D P... [more]
ATPD_KLULA3.1e-1943.41ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8... [more]
Match NameE-valueIdentityDescription
A0A0A0L7T8_CUCSA1.8e-9089.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128910 PE=3 SV=1[more]
A0A067KAQ2_JATCU4.0e-8281.50Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14670 PE=3 SV=1[more]
A0A061DUT8_THECC1.2e-8179.00ATPase, F1 complex, delta/epsilon subunit OS=Theobroma cacao GN=TCM_005791 PE=3 ... [more]
D7SM33_VITVI9.9e-8178.16Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=... [more]
A5C7J7_VITVI1.3e-8078.16Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044183 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT5G47030.16.0e-7772.68 ATPase, F1 complex, delta/epsilon subunit[more]
Match NameE-valueIdentityDescription
gi|659075690|ref|XP_008438277.1|6.2e-9290.50PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo][more]
gi|449432356|ref|XP_004133965.1|2.6e-9089.00PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus][more]
gi|1009159533|ref|XP_015897863.1|8.1e-8483.08PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba][more]
gi|1012234748|ref|XP_015939350.1|2.4e-8382.00PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis duranensis][more]
gi|1021567210|ref|XP_016174843.1|1.2e-8281.00PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis ipaensis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001469ATP_synth_F1_dsu/esu
IPR020546ATP_synth_F1_dsu/esu_N
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0046961proton-transporting ATPase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0009060 aerobic respiration
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0051788 response to misfolded protein
biological_process GO:0046686 response to cadmium ion
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0006972 hyperosmotic response
biological_process GO:0007030 Golgi organization
biological_process GO:0006096 glycolytic process
biological_process GO:0006950 response to stress
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0042221 response to chemical
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:1901575 organic substance catabolic process
biological_process GO:0046496 nicotinamide nucleotide metabolic process
biological_process GO:0016043 cellular component organization
biological_process GO:0006833 water transport
cellular_component GO:0005753 mitochondrial proton-transporting ATP synthase complex
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0005743 mitochondrial inner membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G012170.1CmoCh06G012170.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001469ATPase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 68..188
score: 1
IPR001469ATPase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 2..198
score: 6.7E
IPR001469ATPase, F1 complex, delta/epsilon subunitTIGRFAMsTIGR01216TIGR01216coord: 82..186
score: 5.2
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPRODOMPD000944coord: 75..156
score: 7.0
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalGENE3DG3DSA:2.60.15.10coord: 59..156
score: 1.1
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 70..141
score: 1.5
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalunknownSSF51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 70..151
score: 1.2
NoneNo IPR availableunknownCoilCoilcoord: 165..185
scor
NoneNo IPR availableGENE3DG3DSA:1.20.5.440coord: 157..198
score: 1.
NoneNo IPR availablePANTHERPTHR13822:SF7ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIALcoord: 2..198
score: 6.7E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G012170CmoCh14G019870Cucurbita moschata (Rifu)cmocmoB224
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G012170Silver-seed gourdcarcmoB0322
CmoCh06G012170Silver-seed gourdcarcmoB1451
CmoCh06G012170Cucurbita moschata (Rifu)cmocmoB308
CmoCh06G012170Cucurbita moschata (Rifu)cmocmoB484
CmoCh06G012170Cucurbita maxima (Rimu)cmacmoB362
CmoCh06G012170Cucurbita pepo (Zucchini)cmocpeB765
CmoCh06G012170Cucurbita pepo (Zucchini)cmocpeB777