CmoCh06G012170 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCCGATTCCTCCATTTTCTCAGCTTCCAAACAGCACCAGCGGAACCCTTTCACTTCTCCTTCTTCTTCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCCCTCCAGTCTCCGCCATGTTCCGACGAGCTTCCACCCTTTTGACCCGGCCTCTTCTCTCTGCAAGGGCTAGATCCTTCTCCGCCGATCTGCCGGCGGCTTCTTCAACTGACGATGCCTTTGTCGCTGCCTGGAAGAAGGCGATCCCCACTATTGATCCTCCTAGAACTCCTCTCTTTTTCATGGCTCCTCGTCCTGCTACGCCGTCTTCCATCCCTACTAAGCTCACTGTCAACTTTGTTCTTCCTTATGCCTCCGAGCTCTCGGCCAAAGAGGTTAGTCTTTCGAATTTTGTTTTGCCTGGTGATTTTTTTTATTTTGTGTACCAGGCGTTGAATCTTGTGTATGATTTTCAATTTTTTGATGCATTTGATTTGATTTGATTTTTTTGTGGATTTTTTTTTATATGTTTTTATTGACTCTTGGATTAACCTTCTGTCGGCTAATTTTGATGGAAAATCGTGACTTGTTCATTGTTTCGAACCTTCGTAATTAATACAATCGGATGTTTAGAGAAAAATAATGGACGTAAATTAGCATTTCGTGTCCATGGTTACGAATGCTGGACTCGAAATTGATTTTAAACGAGTGCGGGAAGCTGTTACTTTATTTTTTCCTCTGGATATGAAAGATGAATTCCTTCAATTCATCAGTACGTTTCATAGATTTGATTTTTCTTGTTTTTTTTTTTTTTATCTTTGGCATTCATTTCCTTATACTATCTTTTCACGCTGGAGGAAATTCGACGTTTTCTTTTCATATTCATGGACATGTTGATGATCAGATCAAATTATATAATCTCTGTAAATGTCATGTTCTTTGCTTATGGTCAAGGAGTCTCTAAGTGCTGTTGATATGCAGTATCAAGAACTGCTAAATCAGCGCGTAGGCTTGTCGTATCCAATGCTGTTATATCAGCAAAATCCTGATAAATTAAGGCGGCATTTTCATTCATCTGTTCATATTATCATCAATTCTTTAAAAGGTTTATATTCATGGACATGTTGATGATCAGATCAAATTGTATAATCTCTGTAAATGTCATGTTCTTTGCTCATGGTCAAGGAGTCTCTAAGTGCTGTTGATATGCAGTATCAAGAACTGCTAAATCTGCGTATCTGTAGCGTAGGCTTGTCGTATCCAATGCTGTTATATCAGCAAAATCCTGATAAATTAAGGCGGCATTTTCATTCATCTGTTCATATTATCATCAGTTCTTAAAGGGTTTATATTTGTTTCTTAGCTCATCCAGAATCCTATGCCGCAACTGTCCACTTATACCGGTGGCTGTTGTTTTCTATATCCCAGCCCCAGGTCCTTGTGCTTAGTTTAAAGAGGGAAGATCCTCTAATGGGTACTTACTTATTCGATTCTCTTCGGTATTGAAAATTCAAAAGGGGCTACTGGTGAAGAGAACCCTGTTCATTAACGCCTTCTATTCTTCCTTTTTTGGTTTAGAACACATATTAGCAAAAGAACATGTACAAAGAGATGAGGATAAAAGGGAGATCAGATATTACATGCCTCTACTAGTTTGAATAACTAACTATAAAAGAATACAGAGGGAAAGTCTCCTAGGGAGAATTGGCCCACCATTTTTCCCCTTTTCTTCTTCTTTTTGGATCGTAACTTAGCGTGAGCAAATCTTCTAGAGAGCGTGCCCAAAATAATATTCCAAAGCTTTTTTTAGACTTGCTTCATAGAAGGACACCTTTCCGTGTTTAGAGAGTCAACTCTGTCCTCTCCAATTCCATTTCCATTGGCGAGAGAAACTTTGGGCCGAGCCACGAAAAAAATATATGAAAGACAATAATCAGATTTGTGGATTTTAGTAGGATTTATTCTCATGATGTAGAAATAAGAAAACCAGGAACAGGGTCAACGATCACTCACGTCATGGGCTGGCAAGAACTCAAGACAATTCTCACGAAACTCTTTCCTCTACGCTTCTTGGGGATTTCTTCTCTTCAATAAAAAGGAACTCTTTGGAGAGAATTCCCCTTACTCGACTTCCAAGACTACAAACAAAATCATACCGATTTATCCATTTTCCAATTTTTCCTTAAAGATTCTTTGGGTATATACACATTGCTCAACCTCGAGCTGCTAGAAGTTACTTGAGCTGCTACAGTTAAATAGATAAGTTACTCAGAGCACAGTTAAATAGATAAGAGGCAAAAAAGAAACCTCGAGCTGCTAGTGAATGCTACAGTTAAATAGATAAGAGGCAAAAAAGAAAAGTATGTTGTCTGTAAACTCGAGCTGCTAGAAGTTACTCAGAGTTTATGCTTCCAAGTTTATTATGAACCTAGTGCACCGATTCGATTTATTCTTCATTTTTCTTCTCTTACTGATGAGAGGCTATTTCAAATTCACTTCAATTGTTCTGTTTTGGGCTCATGAACACTCTTTATCACAGACGTTGCTATGATTAAGGATACAAATTGCAATGGAACCCAAAGTTTTGAGTCAGATTATTCATTGCTCTTCTTTAAAAGTCTTTGTTCTTCCCCCCCATTCCGAACAGGTTGACATGGTAATAATTCCAGCCACAACTGGGCAAATGGGTGTTCTTCCCGGCCATGTAGCTACAATCGCAGAGTTGAAACCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTACGCTGACATAATCGCCGTGGAAGCTGTGCCTGTAGACCAAATCGACCCCGACCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAACGCTGCCCTTACAGGATAGTTTCCTCGACTCGCAAATCGGCCACCTTTCTGTTTATCTATTTCCAATTGTTCGTTGCTTCATAACACTGCCTCATTGTGACAGTTCGAGTTAGCCTTCCTCGGTCGAAATACCTACTGGGAAACACATCATCTTGGGCTTACCCTTTCTGTGTTGAATTTCAAGTCATTCACAAATAAATATATTAGGGATGGATTTTTGCTTGGCCTTATTGGTCATAATCTGGTGGCGTAGACCTCATAAACATGGAAGAATTCTCATTTGAATCTGTATGGATATGATTTAATTCATCTTGCATTTGTTAACAATTTCACAAAAATATGGGCCAAATGGGCTTCTTCCTCTTGGGCTTTCCCCGGGCCCACTCACTATGAACTCGGAACTGGGCTTCACGTCCATTGTGCCACTCGGGCCCATCAATTCACAGACAAAATTGTTTTCAGTCACGTGTTTATAAATGAAACCCGACCAGATCTTCA GAGCCGATTCCTCCATTTTCTCAGCTTCCAAACAGCACCAGCGGAACCCTTTCACTTCTCCTTCTTCTTCTCTCTCCGACCTTGCGAGAGCCGAGCGACCCCCCCTCCAGTCTCCGCCATGTTCCGACGAGCTTCCACCCTTTTGACCCGGCCTCTTCTCTCTGCAAGGGCTAGATCCTTCTCCGCCGATCTGCCGGCGGCTTCTTCAACTGACGATGCCTTTGTCGCTGCCTGGAAGAAGGCGATCCCCACTATTGATCCTCCTAGAACTCCTCTCTTTTTCATGGCTCCTCGTCCTGCTACGCCGTCTTCCATCCCTACTAAGCTCACTGTCAACTTTGTTCTTCCTTATGCCTCCGAGCTCTCGGCCAAAGAGGTTGACATGGTAATAATTCCAGCCACAACTGGGCAAATGGGTGTTCTTCCCGGCCATGTAGCTACAATCGCAGAGTTGAAACCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTACGCTGACATAATCGCCGTGGAAGCTGTGCCTGTAGACCAAATCGACCCCGACCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAACGCTGCCCTTACAGGATAGTTTCCTCGACTCGCAAATCGGCCACCTTTCTGTTTATCTATTTCCAATTGTTCGTTGCTTCATAACACTGCCTCATTGTGACAGTTCGAGTTAGCCTTCCTCGGTCGAAATACCTACTGGGAAACACATCATCTTGGGCTTACCCTTTCTGTGTTGAATTTCAAGTCATTCACAAATAAATATATTAGGGATGGATTTTTGCTTGGCCTTATTGGTCATAATCTGGTGGCGTAGACCTCATAAACATGGAAGAATTCTCATTTGAATCTGTATGGATATGATTTAATTCATCTTGCATTTGTTAACAATTTCACAAAAATATGGGCCAAATGGGCTTCTTCCTCTTGGGCTTTCCCCGGGCCCACTCACTATGAACTCGGAACTGGGCTTCACGTCCATTGTGCCACTCGGGCCCATCAATTCACAGACAAAATTGTTTTCAGTCACGTGTTTATAAATGAAACCCGACCAGATCTTCA ATGTTCCGACGAGCTTCCACCCTTTTGACCCGGCCTCTTCTCTCTGCAAGGGCTAGATCCTTCTCCGCCGATCTGCCGGCGGCTTCTTCAACTGACGATGCCTTTGTCGCTGCCTGGAAGAAGGCGATCCCCACTATTGATCCTCCTAGAACTCCTCTCTTTTTCATGGCTCCTCGTCCTGCTACGCCGTCTTCCATCCCTACTAAGCTCACTGTCAACTTTGTTCTTCCTTATGCCTCCGAGCTCTCGGCCAAAGAGGTTGACATGGTAATAATTCCAGCCACAACTGGGCAAATGGGTGTTCTTCCCGGCCATGTAGCTACAATCGCAGAGTTGAAACCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCGTACGCTGACATAATCGCCGTGGAAGCTGTGCCTGTAGACCAAATCGACCCCGACCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTCGACGTGCACAGTGCCCTGAACGCTGCCCTTACAGGATAG
BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 1.1e-80 Identity = 155/200 (77.50%), Postives = 172/200 (86.00%), Query Frame = 1
BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 1.1e-75 Identity = 149/205 (72.68%), Postives = 173/205 (84.39%), Query Frame = 1
BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 7.8e-71 Identity = 146/201 (72.64%), Postives = 168/201 (83.58%), Query Frame = 1
BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.7e-20 Identity = 50/126 (39.68%), Postives = 78/126 (61.90%), Query Frame = 1
BLAST of CmoCh06G012170 vs. Swiss-Prot
Match: ATPD_KLULA (ATP synthase subunit delta, mitochondrial OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ATP16 PE=3 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19 Identity = 56/129 (43.41%), Postives = 81/129 (62.79%), Query Frame = 1
BLAST of CmoCh06G012170 vs. TrEMBL
Match: A0A0A0L7T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128910 PE=3 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 1.8e-90 Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 1
BLAST of CmoCh06G012170 vs. TrEMBL
Match: A0A067KAQ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14670 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.0e-82 Identity = 163/200 (81.50%), Postives = 176/200 (88.00%), Query Frame = 1
BLAST of CmoCh06G012170 vs. TrEMBL
Match: A0A061DUT8_THECC (ATPase, F1 complex, delta/epsilon subunit OS=Theobroma cacao GN=TCM_005791 PE=3 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.2e-81 Identity = 158/200 (79.00%), Postives = 177/200 (88.50%), Query Frame = 1
BLAST of CmoCh06G012170 vs. TrEMBL
Match: D7SM33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 9.9e-81 Identity = 161/206 (78.16%), Postives = 177/206 (85.92%), Query Frame = 1
BLAST of CmoCh06G012170 vs. TrEMBL
Match: A5C7J7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044183 PE=3 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.3e-80 Identity = 161/206 (78.16%), Postives = 177/206 (85.92%), Query Frame = 1
BLAST of CmoCh06G012170 vs. TAIR10
Match: AT5G47030.1 (AT5G47030.1 ATPase, F1 complex, delta/epsilon subunit) HSP 1 Score: 284.3 bits (726), Expect = 6.0e-77 Identity = 149/205 (72.68%), Postives = 173/205 (84.39%), Query Frame = 1
BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|659075690|ref|XP_008438277.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo]) HSP 1 Score: 345.5 bits (885), Expect = 6.2e-92 Identity = 181/200 (90.50%), Postives = 188/200 (94.00%), Query Frame = 1
BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|449432356|ref|XP_004133965.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 2.6e-90 Identity = 178/200 (89.00%), Postives = 185/200 (92.50%), Query Frame = 1
BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|1009159533|ref|XP_015897863.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba]) HSP 1 Score: 318.5 bits (815), Expect = 8.1e-84 Identity = 167/201 (83.08%), Postives = 180/201 (89.55%), Query Frame = 1
BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|1012234748|ref|XP_015939350.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis duranensis]) HSP 1 Score: 317.0 bits (811), Expect = 2.4e-83 Identity = 164/200 (82.00%), Postives = 179/200 (89.50%), Query Frame = 1
BLAST of CmoCh06G012170 vs. NCBI nr
Match: gi|1021567210|ref|XP_016174843.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis ipaensis]) HSP 1 Score: 314.7 bits (805), Expect = 1.2e-82 Identity = 162/200 (81.00%), Postives = 179/200 (89.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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