CsGy3G010430 (gene) Cucumber (Gy14) v2

NameCsGy3G010430
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionATP synthase epsilon chain
LocationChr3 : 8256304 .. 8258891 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAAATCCTCCATTTTCTCAGCTTTCAAACAGCTTCAGCGGAACCCTTCCACTTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCACCCTTCTCTCTCCGACCATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTTAGTCTTCCAACATTTGTTTTGTATGTGATTTTTTTTTTTTTGTGTGTGTTTGAATCTTGTCCTTGATTATGAATTTTTGCTACATTTGATTTGATTTGATTTTATCTTCTGTGAAATTTTCATTTCGTAGTGCCAATTTTGATGTAAAATTATGAGTTGAATCTTCGTGACAAATGCACTCGAATGTTTAAGGGGAAATGCTCGACGTAAAACAAGTATTTCGGTTCTGCAGTTGCGGATGTTGAACTAGAAATGAATTTTATCCTTACTGAGATCGTTTATTGTATTCTTTACTTAATCAGTGTAGATCGTAGATTTCATTTTCTTGTTTTTGTTTTGAATTTGATATTTAGCATTCATTTTCTCGTACCAATTCGATCACACTCGAGGATGTGGCGTGATCTTTTACATTCGTAGACATGGTGATGCTAAGATCAGGGAATAAGAATACTGTAAATGCCATGTTCTTCCCTCATGGTCAAGGACCCTCTTAAGTGTTGTTTATATGAAGCGCAAAGAAATGCTACATCTCCCTATCTAGTAGCTCAGTCCTGTGGTTTCCATTTGAGCATCGGTAATATTAAGAGATAAACCAAACTTTGCCGATAAATTAAGGTGGCGTTTTCATGTTATCATCAATTCTTAAGTTTATATTTCTTTCTCGGTTCTCGCATCCGTAAACCTATTCCGTAACTCTCCGCTTTTACCTATCGCTGTTGTTTTCTGAATCCCTGGCCAGAACTTTGGTGCTTAGTTGAATGGGGAAATATCGTCTATGGGGTAAAGTTACATATTCTATTATCATCAGTACTTAAAATCCAAAAGAAGCTACTGTTGGCAAGAACCCTGTTCACTAATGCCTTCTGTTTCCTGTTTTTGGTTTAATAAACTTTATAGAAGCAAATAATATGTACAATAGAAATGAGGATCAAAAGGGTGCCAATTATTAAAGAGATTACAGACTTCCAATTAGTTTGAGTCACATAGGGAGAATTAACACTAAAGAATTTAGAGGTAAAATTGACCAATGTTTGCTACCATCTATTATCCTCTAAAGATGTTTTGGCTTTTCCCATCGCTCAACCCCATTAATTAGTGAATGCTACATTTCAGTAGAAATTAGTAGGCAAGGAAAAAGTACGTTGTCTGTATATTAGGTGATAAGAAATTATGCTTCCAAGTTTATTGTTAATGTGTCGGCATTTATTGGTTTTTTTCTACATTTCTCTTCCTTAACTGATGGGATGCTAAAATTTTTCTCTAATTCAACTTCCATTTTTCCATTTTGTTTAACTGCTAGAAAGATATAGAAGTAAGGCTCTAGTGGTTGAAATTTTTTATCTCTGGGAAGGAAACCCTGATTTTGCAGTTCGATTACTTGTTGCTGTTATTTCAAAATTTTCGTCTTTCTTCGTTCTGAACAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAGTTTCCCTGGCTCGTAAATCGGCCACCTTTCAGGATTATCTATTTACCAATTGTATGTTCATAACACTGCCTCATTGACATTTTGAGTTGTCTTCTTTGGTGGAAATGCCCTCTGGAACATCATCATCTTGAGGCTTACCTTTCTTGTGTTGAATTTGAAGTGATTCACAAATAAATATATTAGGATGGTTTTTTGTGCTTGGCCTTGTAGCAGCAGCTCATAATCTGTTGAAACCATACCTCACAAAACAAGGAAATATTTTCATTTGAATCTGTATGGATGATTCAAATCATGTCTTATTTTGCAACAATTTTAAACACAACAATATTCTGAATCTATTTGCATTCCTTTCTTTTCTCTTTGATGTGATTGACGGTTGTACGGTGTTAGGGTATGTTTGAGAGTGATTATAAAATGTTTCCTTTGTTTTAAAAA

mRNA sequence

GGCAAATCCTCCATTTTCTCAGCTTTCAAACAGCTTCAGCGGAACCCTTCCACTTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCACCCTTCTCTCTCCGACCATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAGTTTCCCTGGCTCGTAAATCGGCCACCTTTCAGGATTATCTATTTACCAATTGTATGTTCATAACACTGCCTCATTGACATTTTGAGTTGTCTTCTTTGGTGGAAATGCCCTCTGGAACATCATCATCTTGAGGCTTACCTTTCTTGTGTTGAATTTGAAGTGATTCACAAATAAATATATTAGGATGGTTTTTTGTGCTTGGCCTTGTAGCAGCAGCTCATAATCTGTTGAAACCATACCTCACAAAACAAGGAAATATTTTCATTTGAATCTGTATGGATGATTCAAATCATGTCTTATTTTGCAACAATTTTAAACACAACAATATTCTGAATCTATTTGCATTCCTTTCTTTTCTCTTTGATGTGATTGACGGTTGTACGGTGTTAGGGTATGTTTGAGAGTGATTATAAAATGTTTCCTTTGTTTTAAAAA

Coding sequence (CDS)

ATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAG

Protein sequence

MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG
BLAST of CsGy3G010430 vs. NCBI nr
Match: XP_004133965.1 (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus] >KGN56682.1 hypothetical protein Csa_3G128910 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 4.4e-102
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CsGy3G010430 vs. NCBI nr
Match: XP_008438277.1 (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo])

HSP 1 Score: 371.3 bits (952), Expect = 2.0e-99
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFS+DLPAAGS +DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPY+SELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CsGy3G010430 vs. NCBI nr
Match: XP_023528709.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 1.2e-91
Identity = 178/200 (89.00%), Postives = 190/200 (95.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRAS+LLAR   SARTRSFS DLPAA S  DAFV+AWKK+IPNIDPPKTPLSFM+PRP
Sbjct: 1   MFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG++ KKYFVSSGFAFIHGNSYADIIAVEAVP+EQIDA+QVQKGLA+FTQKLNSASTDLE
Sbjct: 121 EGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDASQVQKGLADFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALN+A+TG
Sbjct: 181 KAEAQIGIDVHSALNAAITG 200

BLAST of CsGy3G010430 vs. NCBI nr
Match: XP_022924584.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91
Identity = 178/200 (89.00%), Postives = 189/200 (94.50%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRAS+LLAR   SARTRSFS DLPAA S  DAFV+AWKK+IPNIDPPKTPLSFM+PRP
Sbjct: 1   MFRRASSLLARSHFSARTRSFSADLPAASSTDDAFVAAWKKMIPNIDPPKTPLSFMSPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG++ KKYFVSSGFAFIHGNSYADIIAVEAVP+EQID +QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGNDTKKYFVSSGFAFIHGNSYADIIAVEAVPVEQIDTSQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALN+A+TG
Sbjct: 181 KAEAQIGIDVHSALNAAITG 200

BLAST of CsGy3G010430 vs. NCBI nr
Match: XP_022974765.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91
Identity = 180/200 (90.00%), Postives = 186/200 (93.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLL RP LSAR RSFS DLPAA S  DAFV+AWKK IP IDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLTRPLLSARARSFSADLPAASSTDDAFVAAWKKAIPTIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIP+KLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSIPTKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+ KKYFVSSGFAFIHGNSYADIIAVEAVP++QID  QVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDPDQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

BLAST of CsGy3G010430 vs. TAIR10
Match: AT5G47030.1 (ATPase, F1 complex, delta/epsilon subunit)

HSP 1 Score: 282.7 bits (722), Expect = 1.7e-76
Identity = 146/205 (71.22%), Postives = 176/205 (85.85%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSA-----RTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSF 60
           MF++AS LL+R   +A      TR+FST+LP+  +    FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPG 120
           M PRP+TPSSIP+KLTVN VLPY SEL+ KEVDMVIIPA+TGQMGVLPGHVPTIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSA 180
           ++SVHEG+++KKYF+SSGFAF+H NS ADIIAVEAVP++ ID +QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNSALTG 201
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

BLAST of CsGy3G010430 vs. Swiss-Prot
Match: sp|Q40089|ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 5.0e-81
Identity = 155/200 (77.50%), Postives = 174/200 (87.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFR +S LLAR       R FSTDLPA  +    FV AWKK+IPN+DPPKTP ++MAPRP
Sbjct: 1   MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPY+SEL+ KEVDMVIIPATTGQMGVLPGHV TIAELKPGV+SVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+++ KYFVS GFAFIH NS+ADIIAVEAVP+++IDA  VQKGLAEFTQKLN+ASTD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

BLAST of CsGy3G010430 vs. Swiss-Prot
Match: sp|Q96252|ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.1e-75
Identity = 146/205 (71.22%), Postives = 176/205 (85.85%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSA-----RTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSF 60
           MF++AS LL+R   +A      TR+FST+LP+  +    FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPG 120
           M PRP+TPSSIP+KLTVN VLPY SEL+ KEVDMVIIPA+TGQMGVLPGHVPTIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSA 180
           ++SVHEG+++KKYF+SSGFAF+H NS ADIIAVEAVP++ ID +QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNSALTG 201
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

BLAST of CsGy3G010430 vs. Swiss-Prot
Match: sp|Q41000|ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.2e-70
Identity = 144/201 (71.64%), Postives = 165/201 (82.09%), Query Frame = 0

Query: 1   MFRRA-STLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPR 60
           MFRRA ST L+R   ++ TR FSTD+    +N  +FV AW+KV PNIDPPKTPL F+  R
Sbjct: 1   MFRRATSTFLSR---ASATRRFSTDVATPATN-SSFVEAWRKVSPNIDPPKTPLEFLKTR 60

Query: 61  PATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           P  PS+IP+KLTVN VLPY+S+L+AKEVD VIIPATTG+MGVLPGHV TIAELKPGVL+V
Sbjct: 61  PPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTV 120

Query: 121 HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDL 180
            EG++  KYFVSSGF FIH NS ADIIAVEAVP+ Q+D   VQKGL EFTQKLNSA+TDL
Sbjct: 121 QEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL 180

Query: 181 EKAEAQIGVDVHSALNSALTG 201
           EK EAQIG+DV SALNSALTG
Sbjct: 181 EKREAQIGIDVDSALNSALTG 197

BLAST of CsGy3G010430 vs. Swiss-Prot
Match: sp|Q55F42|ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=atp5f1d PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.6e-21
Identity = 56/136 (41.18%), Postives = 86/136 (63.24%), Query Frame = 0

Query: 61  ATPSSIPSK-LTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           AT +S  S  LT +L+ P+ +    K+  +V +P   G  GV   HVP IAELKPGV+ +
Sbjct: 27  ATEASATSDLLTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQI 86

Query: 121 -HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTD 180
            HE  +++K+F+S GFAF++ ++   I  +EAVPI+Q+DA +V+ GLA +TQ  N A  +
Sbjct: 87  NHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEE 146

Query: 181 LEKAEAQIGVDVHSAL 195
             KA A IG++ +  +
Sbjct: 147 NAKAVALIGLETYQQM 162

BLAST of CsGy3G010430 vs. Swiss-Prot
Match: sp|Q92196|ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus OX=5341 GN=atpD PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.9e-19
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 0

Query: 64  SSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGS 123
           + I  KL ++L LP+ +  S+++V  V IPA +G MG+L  HVP+I  L+PGV+ V E S
Sbjct: 26  AEISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDS 85

Query: 124 EIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAE 183
             +K+FVS GFA +H N+   I  VEA P+E      ++  L E  +    + ++ +K E
Sbjct: 86  GSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKME 145

Query: 184 AQIGVDVHSALNSAL 199
           AQI  +V+ AL  AL
Sbjct: 146 AQIEAEVYEALQHAL 160

BLAST of CsGy3G010430 vs. TrEMBL
Match: tr|A0A0A0L7T8|A0A0A0L7T8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128910 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.9e-102
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CsGy3G010430 vs. TrEMBL
Match: tr|A0A1S3AW39|A0A1S3AW39_CUCME (ATP synthase subunit delta', mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483438 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.4e-99
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFS+DLPAAGS +DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPY+SELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

BLAST of CsGy3G010430 vs. TrEMBL
Match: tr|A0A2P5FPR5|A0A2P5FPR5_9ROSA (ATPase, F1 complex, delta/epsilon subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_045600 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.5e-85
Identity = 164/200 (82.00%), Postives = 184/200 (92.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFR+A+ LL+RP +SAR R FSTDLPAA +   +F  AWKKVIPNIDPPKTPLSFM PRP
Sbjct: 1   MFRQATRLLSRPIISARARPFSTDLPAAETADSSFAEAWKKVIPNIDPPKTPLSFMKPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
            TPSS+PSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  PTPSSVPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVSTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+++ KYF+SSGFAF+H NSYADIIAVEAVP++QID++QVQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNDVTKYFISSGFAFVHANSYADIIAVEAVPLDQIDSSQVQKGLAEFTQKLSSATTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGV+VHSALNSAL+G
Sbjct: 181 KAEAQIGVEVHSALNSALSG 200

BLAST of CsGy3G010430 vs. TrEMBL
Match: tr|A0A2P5CCT8|A0A2P5CCT8_PARAD (ATPase, F1 complex, delta/epsilon subunit OS=Parasponia andersonii OX=3476 GN=PanWU01x14_163940 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.5e-85
Identity = 164/200 (82.00%), Postives = 184/200 (92.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFR+A+ LL+RP +SAR R FSTDLPAA +   +F  AWKKVIPNIDPPKTPLSFM PRP
Sbjct: 1   MFRQATRLLSRPIISARARPFSTDLPAAETADSSFAEAWKKVIPNIDPPKTPLSFMKPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
            TPSS+PSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  PTPSSVPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVSTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+++ KYF+SSGFAFIH NS+ADIIAVEAVP++QID++QVQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNDVTKYFISSGFAFIHANSFADIIAVEAVPLDQIDSSQVQKGLAEFTQKLSSATTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGV+VHSALNSAL+G
Sbjct: 181 KAEAQIGVEVHSALNSALSG 200

BLAST of CsGy3G010430 vs. TrEMBL
Match: tr|A0A1R3HH25|A0A1R3HH25_COCAP (ATPase, F1 complex, delta/epsilon subunit OS=Corchorus capsularis OX=210143 GN=CCACVL1_19342 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 9.4e-85
Identity = 166/200 (83.00%), Postives = 180/200 (90.00%), Query Frame = 0

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           M RRAS LLARP LSAR RSF+TDLPAA +  + FV  WKKVIPNIDPPKTPLSFM PRP
Sbjct: 1   MLRRASGLLARPILSARARSFATDLPAAQTADETFVETWKKVIPNIDPPKTPLSFMQPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
            TPSSIPSKLTVN VLPYASELS KEVDMVI+PATTGQMGVLPGHV TI ELKPGVLSVH
Sbjct: 61  PTPSSIPSKLTVNFVLPYASELSTKEVDMVIVPATTGQMGVLPGHVATITELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+E+ KYFVSSGFAF+H NS ADIIAVEAVP+++IDA+ VQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNEVTKYFVSSGFAFVHANSVADIIAVEAVPLDRIDASLVQKGLAEFTQKLSSATTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALNSALTG
Sbjct: 181 KAEAQIGIDVHSALNSALTG 200

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004133965.14.4e-102100.00PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus] >KGN5668... [more]
XP_008438277.12.0e-9996.50PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo][more]
XP_023528709.11.2e-9189.00ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo][more]
XP_022924584.11.6e-9189.00ATP synthase subunit delta', mitochondrial-like [Cucurbita moschata][more]
XP_022974765.11.6e-9190.00ATP synthase subunit delta', mitochondrial-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G47030.11.7e-7671.22ATPase, F1 complex, delta/epsilon subunit[more]
Match NameE-valueIdentityDescription
sp|Q40089|ATP4_IPOBA5.0e-8177.50ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1[more]
sp|Q96252|ATP4_ARATH3.1e-7571.22ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At... [more]
sp|Q41000|ATP4_PEA5.2e-7071.64ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1[more]
sp|Q55F42|ATPD_DICDI7.6e-2141.18ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 G... [more]
sp|Q92196|ATPD_AGABI1.9e-1940.00ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus OX=5341 GN=atpD P... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0L7T8|A0A0A0L7T8_CUCSA2.9e-102100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G128910 PE=3 SV=1[more]
tr|A0A1S3AW39|A0A1S3AW39_CUCME1.4e-9996.50ATP synthase subunit delta', mitochondrial OS=Cucumis melo OX=3656 GN=LOC1034834... [more]
tr|A0A2P5FPR5|A0A2P5FPR5_9ROSA2.5e-8582.00ATPase, F1 complex, delta/epsilon subunit OS=Trema orientalis OX=63057 GN=TorRG3... [more]
tr|A0A2P5CCT8|A0A2P5CCT8_PARAD5.5e-8582.00ATPase, F1 complex, delta/epsilon subunit OS=Parasponia andersonii OX=3476 GN=Pa... [more]
tr|A0A1R3HH25|A0A1R3HH25_COCAP9.4e-8583.00ATPase, F1 complex, delta/epsilon subunit OS=Corchorus capsularis OX=210143 GN=C... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
Vocabulary: INTERPRO
TermDefinition
IPR020546ATP_synth_F1_dsu/esu_N
IPR036771ATPsynth_dsu/esu_N
IPR001469ATP_synth_F1_dsu/esu
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G010430.1CsGy3G010430.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 165..185
NoneNo IPR availablePANTHERPTHR13822:SF7ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIALcoord: 37..198
IPR001469ATP synthase, F1 complex, delta/epsilon subunitTIGRFAMTIGR01216TIGR01216coord: 72..185
e-value: 6.0E-20
score: 69.6
IPR001469ATP synthase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 37..198
IPR001469ATP synthase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 68..188
score: 15.722
IPR001469ATP synthase, F1 complex, delta/epsilon subunitCDDcd12152F1-ATPase_deltacoord: 70..193
e-value: 5.21709E-37
score: 126.087
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalGENE3DG3DSA:2.60.15.10coord: 64..199
e-value: 3.7E-37
score: 129.1
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalSUPERFAMILYSSF51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 70..151
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 70..141
e-value: 1.0E-17
score: 63.7
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalPRODOMPD000944coord: 75..156
e-value: 4.0E-34
score: 361.0

The following gene(s) are paralogous to this gene:

None