Cucsa.256900 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.256900
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionATP synthase subunit delta
Locationscaffold02229 : 4351567 .. 4354054 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAAATCCTCCATTTTCTCAGCTTTCAAACAGCTTCAGCGGAACCCTTCCACTTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCACCCTTCTCTCTCCGACCATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTTAGTCTTCCAACATTTGTTTTGTATGTGATTTTTTTTTTGTGTGTGTTTGAATCTTGTCCTTGATTATGAATTTTTGCTACATTTGATTTGATTTGATTTTATCTTCTGTGAAATTTTCATTTCGTAGTGCCAATTTTGATGTAAAATTATGAGTTGAATCTTCGTGACAAATGCACTCGAATGTTTAAGGGGAAATGCTCGACGTAAAACAAGTATTTCGGTTCTGCAGTTGCGGATGTTGAACTAGAAATGAATTTTATCCTTACTGAGATCGTTTATTGTATTCTTTACTTAATCAGTGTAGATCGTAGATTTCATTTTCTTGTTTTTGTTTTGAATTTGATATTTAGCATTCATTTTCTCGTACCAATTCGATCACACTCGAGGATGTGGCGTGATCTTTTACATTCGTAGACATGGTGATGCTAAGATCAGGGAATAAGAATACTGTAAATGCCATGTTCTTCCCTCATGGTCAAGGACCCTCTTAAGTGTTGTTTATATGAAGCGCAAAGAAATGCTACATCTCCCTATCTAGTAGCTCAGTCCTGTGGTTTCCATTTGAGCATCGGTAATATTAAGAGATAAACCAAACTTTGCCGATAAATTAAGGTGGCGTTTTCATGTTATCATCAATTCTTAAGTTTATATTTCTTTCTCGGTTCTCGCATCCGTAAACCTATTCCGTAACTCTCCGCTTTTACCTATCGCTGTTGTTTTCTGAATCCCTGGCCAGAACTTTGGTGCTTAGTTGAATGGGGAAATATCGTCTATGGGGTAAAGTTACATATTCTATTATCATCAGTACTTAAAATCCAAAAGAAGCTACTGTTGGCAAGAACCCTGTTCACTAATGCCTTCTGTTTCCTGTTTTTGGTTTAATAAACTTTATAGAAGCAAATAATATGTACAATAGAAATGAGGATCAAAAGGGTGCCAATTATTAAAGAGATTACAGACTTCCAATTAGTTTGAGTCACATAGGGAGAATTAACACTAAAGAATTTAGAGGTAAAATTGACCAATGTTTGCTACCATCTATTATCCTCTAAAGATGTTTTGGCTTTTCCCATCGCTCAACCCCATTAATTAGTGAATGCTACATTTCAGTAGAAATTAGTAGGCAAGGAAAAAGTACGTTGTCTGTATATTAGGTGATAAGAAATTATGCTTCCAAGTTTATTGTTAATGTGTCGGCATTTATTGGTTTTTTTCTACATTTCTCTTCCTTAACTGATGGGATGCTAAAATTTTTCTCTAATTCAACTTCCATTTTTCCATTTTGTTTAACTGCTAGAAAGATATAGAAGTAAGGCTCTAGTGGTTGAAATTTTTTATCTCTGGGAAGGAAACCCTGATTTTGCAGTTCGATTACTTGTTGCTGTTATTTCAAAATTTTCGTCTTTCTTCGTTCTGAACAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAGTTTCCCTGGCTCGTAAATCGGCCACCTTTCAGGATTATCTATTTACCAATTGTATGTTCATAACACTGCCTCATTGACATTTTGAGTTGTCTTCTTTGGTGGAAATGCCCTCTGGAACATCATCATCTTGAGGCTTACCTTTCTTGTGTTGAATTTGAAGTGATTCACAAATAAATATATTAGGATGGTTTTTTGTGCTTGGCCTTGTAGCAGCAGCTCATAATCTGTTGAAACCATACCTCACAAAACAAGGAAATATTTTCATTTGAATCTGTATGGATGATTCAAATCATGTCTTATTTTGCAACAATTTTAAACACAACAATATTCTGAATCTA

mRNA sequence

GGCAAATCCTCCATTTTCTCAGCTTTCAAACAGCTTCAGCGGAACCCTTCCACTTTCTCCTTCTCCTTCTTCATCTCTCTCCGACCTTGCGAGAGCCGAGCGACCACCCTTCTCTCTCCGACCATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAGTTTCCCTGGCTCGTAAATCGGCCACCTTTCAGGATTATCTATTTACCAATTGTATGTTCATAACACTGCCTCATTGACATTTTGAGTTGTCTTCTTTGGTGGAAATGCCCTCTGGAACATCATCATCTTGAGGCTTACCTTTCTTGTGTTGAATTTGAAGTGATTCACAAATAAATATATTAGGATGGTTTTTTGTGCTTGGCCTTGTAGCAGCAGCTCATAATCTGTTGAAACCATACCTCACAAAACAAGGAAATATTTTCATTTGAATCTGTATGGATGATTCAAATCATGTCTTATTTTGCAACAATTTTAAACACAACAATATTCTGAATCTA

Coding sequence (CDS)

ATGTTCCGACGAGCGTCCACCCTTTTGGCCCGTCCTTTTCTCTCTGCAAGGACCAGATCCTTCTCCACCGATCTGCCGGCGGCTGGTTCTAACCAAGATGCCTTTGTCTCCGCCTGGAAGAAAGTCATCCCCAATATTGATCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAACTCACTGTCAACTTGGTCCTTCCCTATGCCTCCGAACTCTCGGCTAAAGAGGTCGACATGGTTATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCACGTACCTACAATCGCAGAGTTGAAGCCTGGGGTTTTATCAGTACATGAAGGGAGCGAAATCAAAAAATACTTTGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCAATAGAACAAATTGATGCTGCCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAAAAGTTGAACTCTGCCTCAACAGACTTGGAAAAAGCCGAAGCCCAAATCGGAGTTGACGTGCACAGTGCTCTGAATTCTGCTCTTACAGGATAG

Protein sequence

MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG*
Homology
[Close]
BLAST of Cucsa.256900 vs. Swiss-Prot
Match: ATP4_IPOBA (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.1e-83
Identity = 155/200 (77.50%), Postives = 174/200 (87.00%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFR +S LLAR       R FSTDLPA  +    FV AWKK+IPN+DPPKTP ++MAPRP
Sbjct: 1   MFRHSSRLLARATTMGWRRPFSTDLPAETAADSTFVEAWKKLIPNVDPPKTPSAYMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVN VLPY+SEL+ KEVDMVIIPATTGQMGVLPGHV TIAELKPGV+SVH
Sbjct: 61  ATPSSIPSKLTVNFVLPYSSELAGKEVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+++ KYFVS GFAFIH NS+ADIIAVEAVP+++IDA  VQKGLAEFTQKLN+ASTD+E
Sbjct: 121 EGNDVSKYFVSGGFAFIHANSFADIIAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 181 KAEAQIGVDVHSALNAALTG 200

[Close]
BLAST of Cucsa.256900 vs. Swiss-Prot
Match: ATP4_ARATH (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 PE=1 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 6.7e-78
Identity = 146/205 (71.22%), Postives = 176/205 (85.85%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSAR-----TRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSF 60
           MF++AS LL+R   +A      TR+FST+LP+  +    FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPG 120
           M PRP+TPSSIP+KLTVN VLPY SEL+ KEVDMVIIPA+TGQMGVLPGHVPTIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSA 180
           ++SVHEG+++KKYF+SSGFAF+H NS ADIIAVEAVP++ ID +QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNSALTG 201
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

[Close]
BLAST of Cucsa.256900 vs. Swiss-Prot
Match: ATP4_PEA (ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 8.4e-73
Identity = 144/201 (71.64%), Postives = 165/201 (82.09%), Query Frame = 1 

Query: 1   MFRRA-STLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPR 60
           MFRRA ST L+R   ++ TR FSTD+    +N  +FV AW+KV PNIDPPKTPL F+  R
Sbjct: 1   MFRRATSTFLSR---ASATRRFSTDVATPATNS-SFVEAWRKVSPNIDPPKTPLEFLKTR 60

Query: 61  PATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           P  PS+IP+KLTVN VLPY+S+L+AKEVD VIIPATTG+MGVLPGHV TIAELKPGVL+V
Sbjct: 61  PPVPSTIPTKLTVNFVLPYSSQLAAKEVDSVIIPATTGEMGVLPGHVATIAELKPGVLTV 120

Query: 121 HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDL 180
            EG++  KYFVSSGF FIH NS ADIIAVEAVP+ Q+D   VQKGL EFTQKLNSA+TDL
Sbjct: 121 QEGTDTTKYFVSSGFRFIHANSVADIIAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDL 180

Query: 181 EKAEAQIGVDVHSALNSALTG 201
           EK EAQIG+DV SALNSALTG
Sbjct: 181 EKREAQIGIDVDSALNSALTG 197

[Close]
BLAST of Cucsa.256900 vs. Swiss-Prot
Match: ATPD_DICDI (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.3e-22
Identity = 56/136 (41.18%), Postives = 86/136 (63.24%), Query Frame = 1 

Query: 61  ATPSSIPSKL-TVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           AT +S  S L T +L+ P+ +    K+  +V +P   G  GV   HVP IAELKPGV+ +
Sbjct: 27  ATEASATSDLLTFSLLSPHQTIYKDKKAQLVTLPGAKGIFGVAKNHVPRIAELKPGVIQI 86

Query: 121 -HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTD 180
            HE  +++K+F+S GFAF++ ++   I  +EAVPI+Q+DA +V+ GLA +TQ  N A  +
Sbjct: 87  NHENGDLEKFFISGGFAFVNPDASCYINTIEAVPIDQLDAEEVKNGLARYTQLYNDAQEE 146

Query: 181 LEKAEAQIGVDVHSAL 195
             KA A IG++ +  +
Sbjct: 147 NAKAVALIGLETYQQM 162

[Close]
BLAST of Cucsa.256900 vs. Swiss-Prot
Match: ATPD_AGABI (ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 1 

Query: 64  SSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVHEGS 123
           + I  KL ++L LP+ +  S+++V  V IPA +G MG+L  HVP+I  L+PGV+ V E S
Sbjct: 26  AEISDKLKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDS 85

Query: 124 EIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLEKAE 183
             +K+FVS GFA +H N+   I  VEA P+E      ++  L E  +    + ++ +K E
Sbjct: 86  GSQKWFVSGGFATVHPNNRLTINVVEAAPLEDFSIEAIRANLQEANKVAAGSGSEADKME 145

Query: 184 AQIGVDVHSALNSAL 199
           AQI  +V+ AL  AL
Sbjct: 146 AQIEAEVYEALQHAL 160

[Close]
BLAST of Cucsa.256900 vs. TrEMBL
Match: A0A0A0L7T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128910 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.4e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Cucsa.256900 vs. TrEMBL
Match: A0A061DUT8_THECC (ATPase, F1 complex, delta/epsilon subunit OS=Theobroma cacao GN=TCM_005791 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 9.3e-87
Identity = 163/200 (81.50%), Postives = 180/200 (90.00%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           M RRAS LLARP L+AR R FSTDLPAA +    FV AWKKVIPN+DPPKTPLSFM PRP
Sbjct: 1   MLRRASGLLARPILAARARPFSTDLPAAQTADATFVEAWKKVIPNMDPPKTPLSFMQPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
            TPSSIPSKLTVN VLPYASEL+ KEVDMVI+PATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  PTPSSIPSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+E+ KYF+SSGFAFIH NS+AD+IAVEAVP+++IDA+ VQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNEVTKYFISSGFAFIHANSFADVIAVEAVPLDRIDASLVQKGLAEFTQKLSSATTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALNS LTG
Sbjct: 181 KAEAQIGIDVHSALNSTLTG 200

[Close]
BLAST of Cucsa.256900 vs. TrEMBL
Match: A0A067KAQ2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14670 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 7.9e-86
Identity = 165/200 (82.50%), Postives = 176/200 (88.00%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           M RRA+  LARP L  R R FSTDL AA +    FV AWKKVIPN++PPKTPLSFM PRP
Sbjct: 55  MLRRATGFLARPILCGRARPFSTDLHAAQTTDSGFVEAWKKVIPNMEPPKTPLSFMQPRP 114

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
            TPSSIPSKLTVN VLPYASELS KE DMVIIPATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 115 PTPSSIPSKLTVNFVLPYASELSNKEADMVIIPATTGQMGVLPGHVSTIAELKPGVLSVH 174

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+E+ KYFVSSGFAFIH NS+ADIIAVEAVP++QIDA QVQKGLAEFTQKL+SASTDLE
Sbjct: 175 EGNEVTKYFVSSGFAFIHANSFADIIAVEAVPVDQIDANQVQKGLAEFTQKLSSASTDLE 234

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALN+ALTG
Sbjct: 235 KAEAQIGVDVHSALNAALTG 254

[Close]
BLAST of Cucsa.256900 vs. TrEMBL
Match: A0A0D2S113_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G167800 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-83
Identity = 162/201 (80.60%), Postives = 175/201 (87.06%), Query Frame = 1 

Query: 1   MFRRASTLLAR-PFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPR 60
           M RRAS LLAR P L+AR R FSTDLPAA S    F  AW KVIPN+DPPKTPLSFM PR
Sbjct: 1   MLRRASMLLARRPILAARARPFSTDLPAAPSADATFTEAWTKVIPNMDPPKTPLSFMQPR 60

Query: 61  PATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           P TPSSIPSKLTVN VLPYASEL+ KEVDMVI+PATTGQMGVLPGHV TIAELKPGVLSV
Sbjct: 61  PPTPSSIPSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSV 120

Query: 121 HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDL 180
           HEGSE+ KYFVSSGF FIH NS+ADIIAVEAVP++++D   VQKGLAEFT KL+SA+TDL
Sbjct: 121 HEGSEVTKYFVSSGFVFIHANSFADIIAVEAVPLDRLDVNLVQKGLAEFTSKLSSATTDL 180

Query: 181 EKAEAQIGVDVHSALNSALTG 201
           EKAEAQIG+DVHSALNSALTG
Sbjct: 181 EKAEAQIGIDVHSALNSALTG 201

[Close]
BLAST of Cucsa.256900 vs. TrEMBL
Match: D7SM33_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.6e-83
Identity = 160/206 (77.67%), Postives = 179/206 (86.89%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLS------ARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLS 60
           M R+A+ LLARP ++      AR RSFSTDLP A +    F+ AWKK+IPNIDPP TPL+
Sbjct: 1   MLRQATRLLARPAIASSSSFAARARSFSTDLPTAPAEDSTFIDAWKKIIPNIDPPATPLT 60

Query: 61  FMAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKP 120
           FM PRP TPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTGQMGVLPGHV TIAELKP
Sbjct: 61  FMQPRPQTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKP 120

Query: 121 GVLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNS 180
           GV+SVHEG+++ KYF+SSGFA IH NS+ADIIA+EAVPI+QID + VQKGLA+FTQKL+S
Sbjct: 121 GVMSVHEGNDVTKYFISSGFAVIHANSFADIIAIEAVPIDQIDPSLVQKGLADFTQKLSS 180

Query: 181 ASTDLEKAEAQIGVDVHSALNSALTG 201
           ASTDLEKAEAQIGVDVHSALNSALTG
Sbjct: 181 ASTDLEKAEAQIGVDVHSALNSALTG 206

[Close]
BLAST of Cucsa.256900 vs. TAIR10
Match: AT5G47030.1 (AT5G47030.1 ATPase, F1 complex, delta/epsilon subunit)

HSP 1 Score: 291.6 bits (745), Expect = 3.7e-79
Identity = 146/205 (71.22%), Postives = 176/205 (85.85%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSAR-----TRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSF 60
           MF++AS LL+R   +A      TR+FST+LP+  +    FV AWKKV PN+DPP+TP +F
Sbjct: 1   MFKQASRLLSRSVAAASSKSVTTRAFSTELPS--TLDSTFVEAWKKVAPNMDPPQTPSAF 60

Query: 61  MAPRPATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPG 120
           M PRP+TPSSIP+KLTVN VLPY SEL+ KEVDMVIIPA+TGQMGVLPGHVPTIAELKPG
Sbjct: 61  MKPRPSTPSSIPTKLTVNFVLPYTSELTGKEVDMVIIPASTGQMGVLPGHVPTIAELKPG 120

Query: 121 VLSVHEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSA 180
           ++SVHEG+++KKYF+SSGFAF+H NS ADIIAVEAVP++ ID +QVQKGLAEF QKL SA
Sbjct: 121 IMSVHEGTDVKKYFLSSGFAFLHANSVADIIAVEAVPLDHIDPSQVQKGLAEFQQKLASA 180

Query: 181 STDLEKAEAQIGVDVHSALNSALTG 201
           +TDLEKAEAQIGV+VHSA+N+AL+G
Sbjct: 181 TTDLEKAEAQIGVEVHSAINAALSG 203

[Close]
BLAST of Cucsa.256900 vs. NCBI nr
Match: gi|449432356|ref|XP_004133965.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 4.9e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Cucsa.256900 vs. NCBI nr
Match: gi|659075690|ref|XP_008438277.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 2.3e-102
Identity = 193/200 (96.50%), Postives = 199/200 (99.50%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLLARPFLSARTRSFS+DLPAAGS +DAFVSAWKKVIPNIDPPKTPLSFMAPRP
Sbjct: 1   MFRRASTLLARPFLSARTRSFSSDLPAAGSTEDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSSIPSKLTVNLVLPY+SELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH
Sbjct: 61  ATPSSIPSKLTVNLVLPYSSELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EGS+IKKYFVSSGFAFIHGNSYADIIAVEAVP++QIDAAQVQKGLAEFTQKLNSASTDLE
Sbjct: 121 EGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAAQVQKGLAEFTQKLNSASTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Cucsa.256900 vs. NCBI nr
Match: gi|1009159533|ref|XP_015897863.1| (PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba])

HSP 1 Score: 328.9 bits (842), Expect = 6.0e-87
Identity = 168/201 (83.58%), Postives = 181/201 (90.05%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSA-RTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPR 60
           MFRR ++LLARP +SA R RSFSTDLPA  +   AFV AWKKV+PN DPPKTPL+FM PR
Sbjct: 1   MFRRVTSLLARPIISAGRARSFSTDLPANPTADSAFVDAWKKVVPNTDPPKTPLAFMKPR 60

Query: 61  PATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSV 120
           P TPSSIPSKLTVN VLPYASELSAKEVDMVIIPATTG MGVLPGHV TIAELKPGVLSV
Sbjct: 61  PPTPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGHMGVLPGHVATIAELKPGVLSV 120

Query: 121 HEGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDL 180
           HEG++  KYF+SSGFAFIH NSYADIIAVEAVP++QIDA+ VQKGLAEFTQKL+SASTDL
Sbjct: 121 HEGNDTTKYFISSGFAFIHANSYADIIAVEAVPLDQIDASLVQKGLAEFTQKLSSASTDL 180

Query: 181 EKAEAQIGVDVHSALNSALTG 201
           EKAEAQIGVDVHSALNSALTG
Sbjct: 181 EKAEAQIGVDVHSALNSALTG 201

[Close]
BLAST of Cucsa.256900 vs. NCBI nr
Match: gi|1012234748|ref|XP_015939350.1| (PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis duranensis])

HSP 1 Score: 328.6 bits (841), Expect = 7.8e-87
Identity = 164/200 (82.00%), Postives = 179/200 (89.50%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           MFRRASTLL RP + A +R FSTDLPAA     +FV AWKKV PN+DPPKTPL++M PRP
Sbjct: 1   MFRRASTLLRRPLMGATSRRFSTDLPAAAVEDSSFVEAWKKVSPNVDPPKTPLAYMKPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
           ATPSS+PSKLTVN VLPYASELSAKEVDMVI+PATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  ATPSSLPSKLTVNFVLPYASELSAKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+++ KYFVSSGFAFIH NS ADIIAVEAVP+++IDA  VQKGL EFTQKLNSA+TDLE
Sbjct: 121 EGNDVTKYFVSSGFAFIHANSVADIIAVEAVPVDRIDANLVQKGLQEFTQKLNSATTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIGVDVHSALNSALTG
Sbjct: 181 KAEAQIGVDVHSALNSALTG 200

[Close]
BLAST of Cucsa.256900 vs. NCBI nr
Match: gi|590724229|ref|XP_007052407.1| (ATPase, F1 complex, delta/epsilon subunit [Theobroma cacao])

HSP 1 Score: 327.8 bits (839), Expect = 1.3e-86
Identity = 163/200 (81.50%), Postives = 180/200 (90.00%), Query Frame = 1 

Query: 1   MFRRASTLLARPFLSARTRSFSTDLPAAGSNQDAFVSAWKKVIPNIDPPKTPLSFMAPRP 60
           M RRAS LLARP L+AR R FSTDLPAA +    FV AWKKVIPN+DPPKTPLSFM PRP
Sbjct: 1   MLRRASGLLARPILAARARPFSTDLPAAQTADATFVEAWKKVIPNMDPPKTPLSFMQPRP 60

Query: 61  ATPSSIPSKLTVNLVLPYASELSAKEVDMVIIPATTGQMGVLPGHVPTIAELKPGVLSVH 120
            TPSSIPSKLTVN VLPYASEL+ KEVDMVI+PATTGQMGVLPGHV TIAELKPGVLSVH
Sbjct: 61  PTPSSIPSKLTVNFVLPYASELATKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVH 120

Query: 121 EGSEIKKYFVSSGFAFIHGNSYADIIAVEAVPIEQIDAAQVQKGLAEFTQKLNSASTDLE 180
           EG+E+ KYF+SSGFAFIH NS+AD+IAVEAVP+++IDA+ VQKGLAEFTQKL+SA+TDLE
Sbjct: 121 EGNEVTKYFISSGFAFIHANSFADVIAVEAVPLDRIDASLVQKGLAEFTQKLSSATTDLE 180

Query: 181 KAEAQIGVDVHSALNSALTG 201
           KAEAQIG+DVHSALNS LTG
Sbjct: 181 KAEAQIGIDVHSALNSTLTG 200

The following BLAST results are available for this feature:
BLAST of Cucsa.256900 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATP4_IPOBA1.1e-8377.50ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas PE=1 SV=1[more]
ATP4_ARATH6.7e-7871.22ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana GN=At5g47030 ... [more]
ATP4_PEA8.4e-7371.64ATP synthase subunit delta', mitochondrial OS=Pisum sativum PE=3 SV=1[more]
ATPD_DICDI2.3e-2241.18ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum GN=atp5D P... [more]
ATPD_AGABI7.5e-2140.00ATP synthase subunit delta, mitochondrial OS=Agaricus bisporus GN=atpD PE=2 SV=1[more]
BLAST of Cucsa.256900 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7T8_CUCSA3.4e-105100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128910 PE=3 SV=1[more]
A0A061DUT8_THECC9.3e-8781.50ATPase, F1 complex, delta/epsilon subunit OS=Theobroma cacao GN=TCM_005791 PE=3 ... [more]
A0A067KAQ2_JATCU7.9e-8682.50Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14670 PE=3 SV=1[more]
A0A0D2S113_GOSRA1.3e-8380.60Uncharacterized protein OS=Gossypium raimondii GN=B456_004G167800 PE=3 SV=1[more]
D7SM33_VITVI1.6e-8377.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g00920 PE=3 SV=... [more]
BLAST of Cucsa.256900 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G47030.13.7e-7971.22 ATPase, F1 complex, delta/epsilon subunit[more]
BLAST of Cucsa.256900 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432356|ref|XP_004133965.1|4.9e-105100.00PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis sativus][more]
gi|659075690|ref|XP_008438277.1|2.3e-10296.50PREDICTED: ATP synthase subunit delta', mitochondrial [Cucumis melo][more]
gi|1009159533|ref|XP_015897863.1|6.0e-8783.58PREDICTED: ATP synthase subunit delta', mitochondrial [Ziziphus jujuba][more]
gi|1012234748|ref|XP_015939350.1|7.8e-8782.00PREDICTED: ATP synthase subunit delta', mitochondrial-like [Arachis duranensis][more]
gi|590724229|ref|XP_007052407.1|1.3e-8681.50ATPase, F1 complex, delta/epsilon subunit [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001469ATP_synth_F1_dsu/esu
IPR020546ATP_synth_F1_dsu/esu_N
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0046961proton-transporting ATPase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.256900.1Cucsa.256900.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001469ATPase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 68..188
score: 15
IPR001469ATPase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 2..198
score: 5.3E
IPR001469ATPase, F1 complex, delta/epsilon subunitTIGRFAMsTIGR01216TIGR01216coord: 72..185
score: 6.0
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPRODOMPD000944coord: 75..156
score: 4.0
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalGENE3DG3DSA:2.60.15.10coord: 59..156
score: 7.0
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 70..141
score: 9.7
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalunknownSSF51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 70..151
score: 1.15
NoneNo IPR availableunknownCoilCoilcoord: 165..185
scor
NoneNo IPR availableGENE3DG3DSA:1.20.5.440coord: 157..198
score: 1.
NoneNo IPR availablePANTHERPTHR13822:SF7ATP SYNTHASE SUBUNIT DELTA, MITOCHONDRIALcoord: 2..198
score: 5.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.256900Cla021378Watermelon (97103) v1cgywmB479
Cucsa.256900Csa3G128910Cucumber (Chinese Long) v2cgycuB366
Cucsa.256900MELO3C006270Melon (DHL92) v3.5.1cgymeB439
Cucsa.256900ClCG05G002910Watermelon (Charleston Gray)cgywcgB451
Cucsa.256900CSPI03G10320Wild cucumber (PI 183967)cgycpiB383
Cucsa.256900CmaCh14G019320Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.256900CmaCh06G011780Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.256900CmoCh14G019870Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.256900CmoCh06G012170Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.256900Lsi05G018890Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.256900Cp4.1LG03g17580Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.256900Cp4.1LG08g02460Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.256900MELO3C006270.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.256900CsaV3_3G010470Cucumber (Chinese Long) v3cgycucB387
Cucsa.256900Cla97C05G083500Watermelon (97103) v2cgywmbB452
Cucsa.256900Bhi01G000117Wax gourdcgywgoB523
Cucsa.256900Carg14891Silver-seed gourdcarcgyB0693
Cucsa.256900Carg06329Silver-seed gourdcarcgyB1077
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.256900Silver-seed gourdcarcgyB0269
Cucsa.256900Silver-seed gourdcarcgyB1190
Cucsa.256900Cucumber (Chinese Long) v3cgycucB388
Cucsa.256900Cucumber (Chinese Long) v3cgycucB390
Cucsa.256900Watermelon (97103) v2cgywmbB449
Cucsa.256900Cucumber (Gy14) v1cgycgyB127
Cucsa.256900Cucumber (Gy14) v1cgycgyB128
Cucsa.256900Cucurbita maxima (Rimu)cgycmaB0715
Cucsa.256900Cucurbita moschata (Rifu)cgycmoB0708
Cucsa.256900Wild cucumber (PI 183967)cgycpiB384
Cucsa.256900Melon (DHL92) v3.5.1cgymeB432
Cucsa.256900Cucurbita pepo (Zucchini)cgycpeB0670
Cucsa.256900Cucurbita pepo (Zucchini)cgycpeB0675
Cucsa.256900Bottle gourd (USVL1VR-Ls)cgylsiB419
Cucsa.256900Bottle gourd (USVL1VR-Ls)cgylsiB423