Lsi05G018520 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGGTCATTATACTTAAGAAGCCGTCAATTATTGCGATCGGGCAGTCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAACGATATCTCAGCCATGTCGTCCAAGCAAGGTACGAATCGATCTATTGAGCGTTCTTTTTCGATTTCATCTTCGTTACGGTAGTATCATCGATCGAAATTTGAAGTTGTTGGCTATGATATGATATATAATCCCCGTTTTTACCGATTTAAATCGTGATGTGGAGAATCGATTTTGTTGTATGTCTTTATAGGAGGGAAAGCTAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGTATGCTTTCAATTTGTTATTTTATGGATCCATGCCGCATATCTATTTTCTTCCTGGTTCTCTTTATTTTGGAATTTGGATACAACTTTTGGGATCGAAGAATTTTGATCTCTCTTATGAAGTTTTGAAGGCTGTTAATGATTTCGTTGAAGTTTCAATTACTGATTGTGGCTTAGCCCACTTTCAGGGTCTCATCAAAATTCCCCTTCGCCTGAAAGGAGAATAGAAGTTATATTTGAGTAACGTGTACCTGTTTTTTGGCTTTGATCTAGTTTTTGCCTTTCTTCATCTGGTTATTATTAAAAAAAATTGAACTGCAAGCATCATTATTGTCCATTCCATTCACCGAGGAGGAAACTTCGAGCTAAAATTATTAACGGATGCCCTCACCTGAAATTACTGTCTATTCCATTCAATGGTTATTTTTATTTAATGGTCCCTTGATGAAGGGAAGATGGGAGGAACTGTAACTGCCACTACCTTAATTCGTTGTGGAGAAATTCTTTTTTGAAGTCAGCTAAATAGCATGGCGAGGTATTATTTTGAGAACTAGAATTTGAATTTTTCTGGGTTTTCTCAACAGGTTGATCTGGCCAACATGCAAAAGAAGAAGGACGAGGAAAAGGTGAGAACTTGAACTTTAAAGTTGAAAACCGTCAGTTTAGTTTAGATGCTTGGTTCTTGAATGAATGCAAACTGTTCATGTTGGTGCATGTCCTATCAACTTTTGTTAATTTTGGTCTCTGGAGTTTAATTTTCATTTTTATCTCATTTTTTGGTTTGACAATTCACTCACTAAATCTCTTAAAATATGACCTCAAATTTGTATTAAAGGGTTTTTATTGTGTATGGTTTTTAATTTAAAATTTTGTAAATAAGAATCAAAATAATCATTTTTTTTGAAAGTTGATGGACCAAAATGAAGATTTTCAAAAGATAAGAACCTAAATGAACGTTTTCATAGCAAGAGAGCAAACCAAACTAAAGCCTTAAATCGTGGGTAATATTTAGGATGCTCCCATCTTTATGCACCTCTCCCCTCACTTGCACCAAAAAAGAATTAAAATATTTAAAAAAAAAATAAAGAACTTGTCATGATTGGTCAATTTGGTAGAGAATTTTGCTTTCAACTTAAACCAAAATTGTCACAAAACTTTTTCTCCTGGTCCATTGGTTGTTTGGAAGATTGCTGCTATTAAAGTCTAATTTGGAAATGTTTGATGATATATACAGGCGATCAGGGAGCTTAGAGCAAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAAAGTGGGAAGAAGTGATGGGTTCCCACGCAAAAACATGGAGGTAGATTACTTGACGACCTGAAATTGCAGACATTTAATGGCTTTTGAATCAGTTGCTTGTCTTTGTGTTCCCTGTAAAACCCTGGAAAGAAGATAATATGCTGTGGAATTATTATAGAAGTTGAACGCTTCTCAATATTCTGAACTTTCTTTAGCTTTAATATATGCTTCTCAATATTCTGAGCTTTCTTTAGCTTTAATATTCTGAACTTTTCTTTTTTTGTTCTTTCCCCTCTCTCTCTCAACTTTTTTTTTTCCTTTTTTAAAAAAAAAAAATGGGAAAAGATATTCTAAACAATCTCTAGACTTGGGGCTAAATGAAATGAATTGTTTGGCACTGTTTGGCGAAGGGTTATTTTTGGGGTCAAGAATTTATCATTGGGTTTGCATTGTGGTCGGGAG CCGGTCATTATACTTAAGAAGCCGTCAATTATTGCGATCGGGCAGTCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAACGATATCTCAGCCATGTCGTCCAAGCAAGGTACGAATCGATCTATTGAGCGTTCTTTTTCGATTTCATCTTCGTTACGGAGGGAAAGCTAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGCGATCAGGGAGCTTAGAGCAAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAAAGTGGGAAGAAGTGATGGGTTCCCACGCAAAAACATGGAGGTAGATTACTTGACGACCTGAAATTGCAGACATTTAATGGCTTTTGAATCAGTTGCTTGTCTTTGTGTTCCCTGTAAAACCCTGGAAAGAAGATAATATGCTGTGGAATTATTATAGAAGTTGAACGCTTCTCAATATTCTGAACTTTCTTTAGCTTTAATATATGCTTCTCAATATTCTGAGCTTTCTTTAGCTTTAATATTCTGAACTTTTCTTTTTTTGTTCTTTCCCCTCTCTCTCTCAACTTTTTTTTTTCCTTTTTTAAAAAAAAAAAATGGGAAAAGATATTCTAAACAATCTCTAGACTTGGGGCTAAATGAAATGAATTGTTTGGCACTGTTTGGCGAAGGGTTATTTTTGGGGTCAAGAATTTATCATTGGGTTTGCATTGTGGTCGGGAG CCGGTCATTATACTTAAGAAGCCGTCAATTATTGCGATCGGGCAGTCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAACGATATCTCAGCCATGTCGTCCAAGCAAGGTACGAATCGATCTATTGAGCGTTCTTTTTCGATTTCATCTTCGTTACGGAGGGAAAGCTAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGCGATCAGGGAGCTTAGAGCAAAGGCCCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAAAGTGGGAAGAAGTGA PVIILKKPSIIAIGQSLFVFFFDSGQTLTISQPCRPSKVRIDLLSVLFRFHLRYGGKAKPLKQPKVDKKDYDEAIRELRAKAQQKGTFGGAGLKKSGKK
BLAST of Lsi05G018520 vs. TrEMBL
Match: A0A0A0L4M8_CUCSA (F9L1.21 protein OS=Cucumis sativus GN=Csa_3G130290 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.2e-13 Identity = 56/113 (49.56%), Postives = 66/113 (58.41%), Query Frame = 1
BLAST of Lsi05G018520 vs. TrEMBL
Match: M5X8F9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026970mg PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.5e-13 Identity = 57/111 (51.35%), Postives = 63/111 (56.76%), Query Frame = 1
BLAST of Lsi05G018520 vs. TrEMBL
Match: A0A067KZI5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06280 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-12 Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Lsi05G018520 vs. TrEMBL
Match: A0A067DH03_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035451mg PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.5e-10 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 1
BLAST of Lsi05G018520 vs. TrEMBL
Match: V4SI02_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026914mg PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 3.5e-10 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 1
BLAST of Lsi05G018520 vs. TAIR10
Match: AT1G15270.1 (AT1G15270.1 Translation machinery associated TMA7) HSP 1 Score: 70.5 bits (171), Expect = 6.7e-13 Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 1
BLAST of Lsi05G018520 vs. TAIR10
Match: AT3G16040.1 (AT3G16040.1 Translation machinery associated TMA7) HSP 1 Score: 65.1 bits (157), Expect = 2.8e-11 Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 1
BLAST of Lsi05G018520 vs. NCBI nr
Match: gi|659075818|ref|XP_008438347.1| (PREDICTED: translation machinery-associated protein 7 homolog [Cucumis melo]) HSP 1 Score: 85.9 bits (211), Expect = 4.4e-14 Identity = 56/113 (49.56%), Postives = 66/113 (58.41%), Query Frame = 1
BLAST of Lsi05G018520 vs. NCBI nr
Match: gi|700201590|gb|KGN56723.1| (F9L1.21 protein [Cucumis sativus]) HSP 1 Score: 84.0 bits (206), Expect = 1.7e-13 Identity = 56/113 (49.56%), Postives = 66/113 (58.41%), Query Frame = 1
BLAST of Lsi05G018520 vs. NCBI nr
Match: gi|595954949|ref|XP_007216609.1| (hypothetical protein PRUPE_ppa026970mg, partial [Prunus persica]) HSP 1 Score: 81.3 bits (199), Expect = 1.1e-12 Identity = 57/111 (51.35%), Postives = 63/111 (56.76%), Query Frame = 1
BLAST of Lsi05G018520 vs. NCBI nr
Match: gi|643729344|gb|KDP37224.1| (hypothetical protein JCGZ_06280 [Jatropha curcas]) HSP 1 Score: 79.7 bits (195), Expect = 3.1e-12 Identity = 39/47 (82.98%), Postives = 42/47 (89.36%), Query Frame = 1
BLAST of Lsi05G018520 vs. NCBI nr
Match: gi|567868739|ref|XP_006426992.1| (hypothetical protein CICLE_v10026914mg [Citrus clementina]) HSP 1 Score: 72.4 bits (176), Expect = 5.0e-10 Identity = 39/61 (63.93%), Postives = 45/61 (73.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |