CsaV3_3G010850 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G010850
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTranslation machinery associated TMA7
Locationchr3 : 8607835 .. 8610010 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGAAAGTTTTGGATTTTCTTAAACAAAATCTAAATCTAATAGATAAATTAACTGTTAATATGTTAAATGATCTTAGATAACTAAAATTGAATATTGAAAGACTAAAATAGTAATTTAACAAAAAAAAAAGAATAAAAGAACACGTGTGCAATGCTTTATGGCCTGGCTTCTATAAATAGATTTAGCCCTGTCGTTATACTTGAGAAGCCGTCAATTGTCGCGAATCGAGTAATCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAGCGATATCTCAGCCATGTCGTCCAAGCAAGGTACGATCGATCTATTCAGCTTTTTTTTTTTCCCCTCTCGATTTCATCTTCGTTACGGTAGTATCATCGATTGAAATCGGTGTTGTTGGCTATGATATGATCTACAATCCCCGTTTTTACCGACTTAAATCGTGATATTGAGAATCGATTTTGGTTTATGTCTTTGTAGGAGGGAAGGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGTATGCTTTTGAATTTATTATTTTATGGATCCATCTCGCGATTAGATTTTTCATGGTTTTCCTTATTTCGGGTTCAATTTTTGGTATCGAAGAATTTCGATCTGCCTTGTGATGTTTTGAAGGCTGTAAATGATTTCATTGAAGTTTAAAATTATTGATTGTTGATCACCCCCTTTTAGAGCCTCATCAAAATTCATGATAAGAGAATAGAAGTTCTGTTTAAGTAACGCGTACCTAAATTTTGGGTTCGATCTAGTTTTTTTGCTTTTTTATTATTATAATTTAATAAAAATTTAGCTGCAAGCATCATTATCGTCGATTCCATTCACCGGAGAGGGAAGGTTCGATTCATTGGTCATTATTAATGGATGCTCTCAGCTGATATCACTTTATTCCAATCATTGATCTTATTAATTAATGGTTACTTGATGAAGGGAAGATGGAGGGAACTGTATCTACCTCTACCCTAATTCGTTCTGGAATATATATATTATAGTTATCTAATTAACCTGGGTTAGATATTATTTTCAAAACTGAAATTTGAATGTTTATGGGTTTTCTCAACAGGTTGATATGGCCAATATGCAAAAGAAGAAGGATGAGGAAAAGGTGAGAACTAGAACCTCATAACTGAAAACTGATGGTCTAATTAGATGCTTTTTGTTTGGTTCTTGAAAGAATGCAAACTGTTCATGTTGGTGCACGTCCTTTTAACTTTTGTTAATTTTGGTTCATTCATTTTCATGCTTTCTATTGAAATTTAGTTTGACAATTCACTCACTAAATTTCTTTAAAATACAACCACAAATTTGTAACAAAGTGTTTCCTCTGTGTATAAGCTTTACGTTAAAATTTTGCAAATAAGAATCATAAACTTAAAATTAAACTTAAAATTGTCACATTAACTTTTTCTTCTGGTCCATTGGTTGTATAATTCTGCGATGTTTGATGATATATACAGGCGCTCAAGGAGCTTAGAGCAAAGGCTCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGAGGGGTTCCCACTTCCCACACAAATTCATGGAGGTAGATTTACTTCACGACCTGAAATTGCAGACATTTAATGGCTTTTGAATCAGTTGATTGTCCTTGTGTGTTTTATGTAAAACCCTGAAAAGAAGATGATATGCTGTTGAATGATTATATAGAAGTTGAATGCTTCTCAATATCCTAAACTTTCTTTAGCTAAATATTCTTAACTTTCCTCTCGTCTTTTGTTCTTTTTTTATTTTAATAAATATAATTAGCAAAAACATATTCTAAATTATCTCTAGACTTGAAACTAAACGAGGTTAAGAATTTAGTATTGGAATTGCATTGTTGTGGTTGGGAAATTTTTTATTCAGCATTACTGAAACGGCAGTACCATTCTCTCTCTGTTTAAACTCTAGTTTTGTTGTTTTTCTTAAATTGCAAATTTGGTTTGTAACTTTGGAATTTTTGTCTAACGATTAGAAACTTAACTCGAGGTTTCAAGTTTTTAAAAATCCCCATAGATCTATTACCGTTAGGGTGATCGTCGGTCAGGCGGGCCAAAACCAGGGTGAAAACCGACAACAGTGTTCAGCTTATCAGTTTCAGTTGGTTTTTCGAAACCTTCT

mRNA sequence

ATGCTTTATGGCCTGGCTTCTATAAATAGATTTAGCCCTGTCGTTATACTTGAGAAGCCGTCAATTGTCGCGAATCGAGTAATCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAGCGATATCTCAGCCATGTCGTCCAAGCAAGGAGGGAAGGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGTTGATATGGCCAATATGCAAAAGAAGAAGGATGAGGAAAAGGCGCTCAAGGAGCTTAGAGCAAAGGCTCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

Coding sequence (CDS)

ATGCTTTATGGCCTGGCTTCTATAAATAGATTTAGCCCTGTCGTTATACTTGAGAAGCCGTCAATTGTCGCGAATCGAGTAATCCCTCTTTGTGTTCTTCTTCGACTCGGGCCAAACCCTAGCGATATCTCAGCCATGTCGTCCAAGCAAGGAGGGAAGGCAAAGCCTCTGAAGCAACCCAAGGTTGATAAGAAAGACTACGACGAGGTTGATATGGCCAATATGCAAAAGAAGAAGGATGAGGAAAAGGCGCTCAAGGAGCTTAGAGCAAAGGCTCAACAGAAGGGGACCTTTGGAGGTGCTGGGCTCAAGAAGAGTGGGAAGAAATGA

Protein sequence

MLYGLASINRFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK
Homology
[Close]
BLAST of CsaV3_3G010850 vs. NCBI nr
Match: KGN56723.1 (F9L1.21 protein [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 3.1e-49
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MLYGLASINRFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQP 60
           MLYGLASINRFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQP
Sbjct: 1   MLYGLASINRFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQP 60

Query: 61  KVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK 110
           KVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 61  KVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK 109

[Close]
BLAST of CsaV3_3G010850 vs. NCBI nr
Match: XP_022145738.1 (translation machinery-associated protein 7 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-29
Identity = 75/84 (89.29%), Postives = 80/84 (95.24%), Query Frame = 0 

Query: 26  RVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKAL 85
           + IPLC  +RLGPNPS ISAMSSKQGGKAKPLKQPKVDKK+YDEVDMAN+QKKKDEEKAL
Sbjct: 16  QAIPLC-SIRLGPNPSKISAMSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKAL 75

Query: 86  KELRAKAQQKGTFGGAGLKKSGKK 110
           +ELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 76  RELRAKAQQKGTFGGAGLKKSGKK 98

[Close]
BLAST of CsaV3_3G010850 vs. NCBI nr
Match: XP_022924253.1 (translation machinery-associated protein 7-like [Cucurbita moschata])

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-26
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 38  PNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGT 97
           PNP+DISAMSSKQGGKAKPLKQPKV+KKDYDEVDMAN+QKKKDEEKAL+ELRAKAQQKG 
Sbjct: 37  PNPNDISAMSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGA 96

Query: 98  FGGAGLKKSGKK 110
           FGGAGLKKSGKK
Sbjct: 97  FGGAGLKKSGKK 108

[Close]
BLAST of CsaV3_3G010850 vs. NCBI nr
Match: XP_022980452.1 (translation machinery-associated protein 7-like [Cucurbita maxima])

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-26
Identity = 67/72 (93.06%), Postives = 71/72 (98.61%), Query Frame = 0 

Query: 38  PNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGT 97
           PNP+DISAMSSKQGGKAKPLKQPKV+KKDYDEVDMAN+QKKKDEEKAL+ELRAKAQQKG 
Sbjct: 30  PNPNDISAMSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGA 89

Query: 98  FGGAGLKKSGKK 110
           FGGAGLKKSGKK
Sbjct: 90  FGGAGLKKSGKK 101

[Close]
BLAST of CsaV3_3G010850 vs. NCBI nr
Match: XP_023512250.1 (LOW QUALITY PROTEIN: translation machinery-associated protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 66/84 (78.57%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 26  RVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKAL 85
           R   LC  +R  PN   +SAMSSKQGGKAKPLKQPKVDKK+YDEVD+AN QKKKDEEKAL
Sbjct: 22  RAFLLCA-IRFRPNXY-LSAMSSKQGGKAKPLKQPKVDKKEYDEVDLANKQKKKDEEKAL 81

Query: 86  KELRAKAQQKGTFGGAGLKKSGKK 110
           +EL+AKAQQKG FGGAGLKKSGKK
Sbjct: 82  RELKAKAQQKGAFGGAGLKKSGKK 103

[Close]
BLAST of CsaV3_3G010850 vs. TAIR10
Match: AT1G15270.1 (Translation machinery associated TMA7)

HSP 1 Score: 107.5 bits (267), Expect = 5.5e-24
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MSSKQGGKAKPLKQPK DKK+YDE D+AN+QKKKDEEKALKELRAKA QKG+FGG+GLKK
Sbjct: 1   MSSKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. TAIR10
Match: AT3G16040.1 (Translation machinery associated TMA7)

HSP 1 Score: 98.2 bits (243), Expect = 3.3e-21
Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MSSKQGGK KPLKQPK  KK+YDE DM  MQKKKDEEKALKELRAKA QKG+FGG+GLKK
Sbjct: 1   MSSKQGGKLKPLKQPKSGKKEYDEHDMELMQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. Swiss-Prot
Match: sp|Q9XZS3|TMA7_DROME (Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX=7227 GN=CG13364 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-10
Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MS ++GGK KPLK PK D KD DE DMA  QK+K+++KAL+  +A A +KG   G G+KK
Sbjct: 1   MSGREGGKKKPLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. Swiss-Prot
Match: sp|Q4SUE2|TMA7_TETNG (Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN=tma7 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MS ++GGK KPLK PK   KD D+ D+A  QK+K+++KA++ L+A+A  KG  GG+G+KK
Sbjct: 1   MSGREGGKKKPLKAPKKQSKDMDDDDVAFKQKQKEDQKAMEALKARASGKGPLGGSGIKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. Swiss-Prot
Match: sp|Q28GR1|TMA7_XENTR (Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MS ++GGK KPLKQPK   KD DE ++A  QK+K+++K L E++ KA QKG   G G+KK
Sbjct: 1   MSGREGGKKKPLKQPKKSNKDMDEDEIAFKQKQKEDQKKLDEMKGKAAQKGPLTGGGIKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. Swiss-Prot
Match: sp|Q05AK9|TMA7_DANRE (Translation machinery-associated protein 7 OS=Danio rerio OX=7955 GN=tma7 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.6e-10
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MS ++GGK KPLK PK   K+ DE +MA  QK+K+++KA+++L+AKA  KG   G G+KK
Sbjct: 1   MSGREGGKKKPLKAPKKQSKEMDEDEMAFKQKQKEDQKAMEQLKAKAAGKGPLTGGGIKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. Swiss-Prot
Match: sp|Q60QR6|TMA7_CAEBR (Translation machinery-associated protein 7 homolog OS=Caenorhabditis briggsae OX=6238 GN=CBG21705 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.8e-09
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MS +QGGKAKPLK PK  +KD  E D+   +K+++E K +KE+ AKA Q+G   G G+KK
Sbjct: 1   MSGRQGGKAKPLKAPKKGEKDLSEEDVEFKKKQQEEAKKIKEMAAKAGQRGPLLGGGIKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. TrEMBL
Match: tr|A0A0A0L4M8|A0A0A0L4M8_CUCSA (F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-49
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0 

Query: 1   MLYGLASINRFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQP 60
           MLYGLASINRFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQP
Sbjct: 1   MLYGLASINRFSPVVILEKPSIVANRVIPLCVLLRLGPNPSDISAMSSKQGGKAKPLKQP 60

Query: 61  KVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK 110
           KVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK
Sbjct: 61  KVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKKSGKK 109

[Close]
BLAST of CsaV3_3G010850 vs. TrEMBL
Match: tr|A0A2P4LMX1|A0A2P4LMX1_QUESU (Receptor-like serine/threonine-protein kinase sd1-7 OS=Quercus suber OX=58331 GN=CFP56_17323 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.2e-22
Identity = 63/74 (85.14%), Postives = 65/74 (87.84%), Query Frame = 0 

Query: 36   LGPNPSDISAMSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQK 95
            L PNP    AMSSKQGGKAKPLKQPK DKKDYDEVDMAN+QKKK+EEKALKELRAKA QK
Sbjct: 1035 LNPNPRSQPAMSSKQGGKAKPLKQPKADKKDYDEVDMANIQKKKEEEKALKELRAKA-QK 1094

Query: 96   GTFGGAGLKKSGKK 110
            G  GGAGLKKSGKK
Sbjct: 1095 GPIGGAGLKKSGKK 1107

[Close]
BLAST of CsaV3_3G010850 vs. TrEMBL
Match: tr|A0A2P5ELN0|A0A2P5ELN0_9ROSA (Translation machinery associated TMA OS=Trema orientalis OX=63057 GN=TorRG33x02_177400 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.1e-22
Identity = 59/64 (92.19%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MSSKQGGKAKPLKQPKVDKK+YDEVDMAN+QKKK+EEKALKEL+AKAQQKG+FGGAGLKK
Sbjct: 1   MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGAGLKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. TrEMBL
Match: tr|A0A2R6PV00|A0A2R6PV00_ACTCH (Translation machinery-associated protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26911 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 59/64 (92.19%), Postives = 61/64 (95.31%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MSSKQGGKAKPLKQPKVDKK+YDE DMAN+QKKKDEEKALKELRAKAQQKG FGG GLKK
Sbjct: 1   MSSKQGGKAKPLKQPKVDKKEYDETDMANLQKKKDEEKALKELRAKAQQKGAFGGTGLKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

[Close]
BLAST of CsaV3_3G010850 vs. TrEMBL
Match: tr|A0A2P5AEL5|A0A2P5AEL5_PARAD (Translation machinery associated TMA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_339940 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.4e-21
Identity = 58/64 (90.62%), Postives = 63/64 (98.44%), Query Frame = 0 

Query: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105
           MSSKQGGKAKPLKQPK DKK+YDEVDMAN+QKKK+EEKALKEL+AKAQQKG+FGGAGLKK
Sbjct: 1   MSSKQGGKAKPLKQPKADKKEYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGAGLKK 60

Query: 106 SGKK 110
           SGKK
Sbjct: 61  SGKK 64

The following BLAST results are available for this feature:
BLAST of CsaV3_3G010850 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56723.13.1e-49100.00F9L1.21 protein [Cucumis sativus][more]
XP_022145738.11.2e-2989.29translation machinery-associated protein 7 [Momordica charantia][more]
XP_022924253.11.7e-2693.06translation machinery-associated protein 7-like [Cucurbita moschata][more]
XP_022980452.11.7e-2693.06translation machinery-associated protein 7-like [Cucurbita maxima][more]
XP_023512250.11.1e-2278.57LOW QUALITY PROTEIN: translation machinery-associated protein 7-like [Cucurbita ... [more]
BLAST of CsaV3_3G010850 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G15270.15.5e-2487.50Translation machinery associated TMA7[more]
AT3G16040.13.3e-2184.38Translation machinery associated TMA7[more]
BLAST of CsaV3_3G010850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9XZS3|TMA7_DROME1.1e-1057.81Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX... [more]
sp|Q4SUE2|TMA7_TETNG1.5e-1054.69Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN... [more]
sp|Q28GR1|TMA7_XENTR1.5e-1056.25Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7... [more]
sp|Q05AK9|TMA7_DANRE5.6e-1054.69Translation machinery-associated protein 7 OS=Danio rerio OX=7955 GN=tma7 PE=3 S... [more]
sp|Q60QR6|TMA7_CAEBR4.8e-0954.69Translation machinery-associated protein 7 homolog OS=Caenorhabditis briggsae OX... [more]
BLAST of CsaV3_3G010850 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L4M8|A0A0A0L4M8_CUCSA2.1e-49100.00F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1[more]
tr|A0A2P4LMX1|A0A2P4LMX1_QUESU6.2e-2285.14Receptor-like serine/threonine-protein kinase sd1-7 OS=Quercus suber OX=58331 GN... [more]
tr|A0A2P5ELN0|A0A2P5ELN0_9ROSA8.1e-2292.19Translation machinery associated TMA OS=Trema orientalis OX=63057 GN=TorRG33x02_... [more]
tr|A0A2R6PV00|A0A2R6PV00_ACTCH1.1e-2192.19Translation machinery-associated protein OS=Actinidia chinensis var. chinensis O... [more]
tr|A0A2P5AEL5|A0A2P5AEL5_PARAD2.4e-2190.63Translation machinery associated TMA OS=Parasponia andersonii OX=3476 GN=PanWU01... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015157TMA7
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G010850.1CsaV3_3G010850.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..109
IPR015157Translation machinery associated TMA7PFAMPF09072TMA7coord: 48..109
e-value: 3.9E-23
score: 81.9
IPR015157Translation machinery associated TMA7PANTHERPTHR28632FAMILY NOT NAMEDcoord: 46..109

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G010850CSPI03G10740Wild cucumber (PI 183967)cpicucB144
CsaV3_3G010850Cucsa.256550Cucumber (Gy14) v1cgycucB387
CsaV3_3G010850CmaCh14G019020Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G010850CmoCh14G019550Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G010850Cp4.1LG03g18040Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G010850CsGy3G010810Cucumber (Gy14) v2cgybcucB117
CsaV3_3G010850Carg24770Silver-seed gourdcarcucB0200
CsaV3_3G010850MELO3C006303Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G010850ClCG05G003220Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G010850Lsi05G018520Bottle gourd (USVL1VR-Ls)cuclsiB228
CsaV3_3G010850Cla97C05G083860Watermelon (97103) v2cucwmbB206
CsaV3_3G010850Bhi01G000153Wax gourdcucwgoB273
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G010850Silver-seed gourdcarcucB0260
CsaV3_3G010850Silver-seed gourdcarcucB1003
CsaV3_3G010850Silver-seed gourdcarcucB1126
CsaV3_3G010850Cucumber (Gy14) v2cgybcucB079
CsaV3_3G010850Cucurbita maxima (Rimu)cmacucB0425
CsaV3_3G010850Cucurbita maxima (Rimu)cmacucB0624
CsaV3_3G010850Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G010850Cucurbita maxima (Rimu)cmacucB0981
CsaV3_3G010850Cucurbita moschata (Rifu)cmocucB0420
CsaV3_3G010850Cucurbita moschata (Rifu)cmocucB0608
CsaV3_3G010850Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G010850Cucurbita moschata (Rifu)cmocucB1032
CsaV3_3G010850Cucurbita pepo (Zucchini)cpecucB0153
CsaV3_3G010850Cucurbita pepo (Zucchini)cpecucB0308
CsaV3_3G010850Cucurbita pepo (Zucchini)cpecucB0385
CsaV3_3G010850Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G010850Wild cucumber (PI 183967)cpicucB093
CsaV3_3G010850Wild cucumber (PI 183967)cpicucB100
CsaV3_3G010850Bottle gourd (USVL1VR-Ls)cuclsiB163
CsaV3_3G010850Melon (DHL92) v3.5.1cucmeB232
CsaV3_3G010850Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G010850Watermelon (Charleston Gray)cucwcgB254
CsaV3_3G010850Watermelon (97103) v1cucwmB239
CsaV3_3G010850Watermelon (97103) v2cucwmbB233
CsaV3_3G010850Wax gourdcucwgoB254