Carg24770 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24770
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Translation machinery associated TMA7
Location	Cucurbita_argyrosperma_scaffold_305 : 121050 .. 122600 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATAAAAGGTGGTAGCAGTTTAAATTGTCAGCAATCATTTAAATTTTATAAATTTTAAAGTAATTTAGAAATAGGAAAAATATATTATTTCTTGAACCACATATTTTATTTTCTTCCAAAAAAAAACGCGCAATGCTTTGTGCCACTATAAATAATAGCCGGTTGTGCTCTTCGACTCGGGCGATCCCTCTTCTTTGTTCTCTTCGACTTGGCCAAACCCTAACGATATCTCAGCCATGTCGTCCAAACAAGGTACGATCTATTGAGCGTTCTTTTCCGATTTCATTTTGGATTCGGTAGTCTCATCGATTGTGTTCTATGTCTTTACAGGAGGGAAAGCGAAGCCATTGAAGCAACCCAAGGTCGAGAAGAAAGATTACGACGAGGTACTCTTTGATTTGTTTTTTTTTTTCTTCCGTAATGGATCTATGCCGCAAATCATCTATGTTCTTCCTGGTTCTCTTTATTTTTTATACAATTTTTTTGGATCGAAGAATTTCAATCTGCCTGATCAAGGCTGTAAAAGAGAATAGAAGTTATTTTTCATTAACGTGCGCCTGATTTTTGGTTTTGGTGTAGTTTTTTTGTGCCTTTTTTCTTGTTACAAGAATCATTATTGTCCATTCTATTCAACGGGGAGGGAAGTTCGTGCCTAAAATTATTGATTGATGCCCTCACCTGAACTGTCTATTCCATTCATTGGTCATTTTTAATTAATGATCGATCCCTTCAGCTGTCTCTATCTTAATTCGTTGTGGAGAAACTCTTATTTTCAAAACTGAACTTTGAATTTTTCTGCGTTTTCTCAACAGGTTGATATGGCAAATATTCAAAAGAAGAAGGACGAGGAAAAGGTTAGAACTGAACTTTGAAGTTGAAATCGGTTCTTATTAAGAGAAAAGATTGAAAACAACTGATTTAGATGCTAGTTTTTTAATACTTTTGTTCATTTTGGTTCCCTCATTCTCGTTTTTATCTCATTAGTACCGATTCATTCACTAAATTTCTTGAACTATAACCATAAATTTGCATCGAAGGATTTGAATTGCGTGTAAAATTTATGTTAAAATGTTGTAAGGACATTTTAGAACTACATGAACCAAAATGAACCATGCCAAAATTACTTCCTAGACCATTGGTTGTCTGCTAATTACAATTTTGAGATGTTTGGATGGTTATACAGGCGCTCAGAGAGCTTAGAGCAAAGGCCCAACAGAAGGGAGCGTTTGGAGGAGCTGGGCTGAAGAAGAGCGGGAAGAAATGAGGGCTCCCACGCAATGCATGTACGTACACATTACTTCACGACCTGAAATTGCAAACATCTAATGGCTGCTGTTTAATCAATTGAGTGTCTTTCTGTTCTGTGTAAAAGCCTGGGAAGAAGATGATCAATGCTCTTCTCCTGGTTTCTTTATTTCTGGAATGGAATGGATAAAATTCTCATGGTTTAATTTAATAATTTTTGCGATTATCAACTGTAAATTTTTTGGGTTGTGTGGGTTTGTTTATTCTAATTTTTGTTTTTTAATAAAAGTATAAGGTTAGTTTCT

mRNA sequence

ACATAAAAGGTGGTAGCAGTTTAAATTGTCAGCAATCATTTAAATTTTATAAATTTTAAAGTAATTTAGAAATAGGAAAAATATATTATTTCTTGAACCACATATTTTATTTTCTTCCAAAAAAAAACGCGCAATGCTTTGTGCCACTATAAATAATAGCCGGTTGTGCTCTTCGACTCGGGCGATCCCTCTTCTTTGTTCTCTTCGACTTGGCCAAACCCTAACGATATCTCAGCCATGTCGTCCAAACAAGGAGGGAAAGCGAAGCCATTGAAGCAACCCAAGGTCGAGAAGAAAGATTACGACGAGGTTGATATGGCAAATATTCAAAAGAAGAAGGACGAGGAAAAGGCGCTCAGAGAGCTTAGAGCAAAGGCCCAACAGAAGGGAGCGTTTGGAGGAGCTGGGCTGAAGAAGAGCGGGAAGAAATGAGGGCTCCCACGCAATGCATGTACGTACACATTACTTCACGACCTGAAATTGCAAACATCTAATGGCTGCTGTTTAATCAATTGAGTGTCTTTCTGTTCTGTGTAAAAGCCTGGGAAGAAGATGATCAATGCTCTTCTCCTGGTTTCTTTATTTCTGGAATGGAATGGATAAAATTCTCATGGTTTAATTTAATAATTTTTGCGATTATCAACTGTAAATTTTTTGGGTTGTGTGGGTTTGTTTATTCTAATTTTTGTTTTTTAATAAAAGTATAAGGTTAGTTTCT

Coding sequence (CDS)

ATGTCGTCCAAACAAGGAGGGAAAGCGAAGCCATTGAAGCAACCCAAGGTCGAGAAGAAAGATTACGACGAGGTTGATATGGCAAATATTCAAAAGAAGAAGGACGAGGAAAAGGCGCTCAGAGAGCTTAGAGCAAAGGCCCAACAGAAGGGAGCGTTTGGAGGAGCTGGGCTGAAGAAGAGCGGGAAGAAATGA

Protein sequence

MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKKSGKK

Homology

[Close]

BLAST of Carg24770 vs. NCBI nr
Match: XP_022924253.1 (translation machinery-associated protein 7-like [Cucurbita moschata])

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
           MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK
Sbjct: 45  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 104

Query: 61  SGKK 65
           SGKK
Sbjct: 105 SGKK 108

[Close]

BLAST of Carg24770 vs. NCBI nr
Match: XP_022980452.1 (translation machinery-associated protein 7-like [Cucurbita maxima])

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-23
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
           MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK
Sbjct: 38  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 97

Query: 61  SGKK 65
           SGKK
Sbjct: 98  SGKK 101

[Close]

BLAST of Carg24770 vs. NCBI nr
Match: XP_022145738.1 (translation machinery-associated protein 7 [Momordica charantia])

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-22
Identity = 61/64 (95.31%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGKAKPLKQPKV+KK+YDEVDMANIQKKKDEEKALRELRAKAQQKG FGGAGLKK
Sbjct: 35 MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKDEEKALRELRAKAQQKGTFGGAGLKK 94

Query: 61 SGKK 65
          SGKK
Sbjct: 95 SGKK 98

[Close]

BLAST of Carg24770 vs. NCBI nr
Match: KGN56723.1 (F9L1.21 protein [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 9.3e-22
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
           MSSKQGGKAKPLKQPKV+KKDYDEVDMAN+QKKKDEEKAL+ELRAKAQQKG FGGAGLKK
Sbjct: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105

Query: 61  SGKK 65
           SGKK
Sbjct: 106 SGKK 109

[Close]

BLAST of Carg24770 vs. NCBI nr
Match: XP_022943547.1 (translation machinery-associated protein 7-like isoform X2 [Cucurbita moschata] >XP_022943548.1 translation machinery-associated protein 7-like isoform X2 [Cucurbita moschata] >XP_022986413.1 translation machinery-associated protein 7-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-21
Identity = 59/64 (92.19%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGKAKPLKQPKV+KK+YDEVD+AN+QKKKDEEKALREL+AKAQQKGAFGGAGLKK
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDEVDLANMQKKKDEEKALRELKAKAQQKGAFGGAGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. TAIR10
Match: AT1G15270.1 (Translation machinery associated TMA7)

HSP 1 Score: 104.4 bits (259), Expect = 2.7e-23
Identity = 55/64 (85.94%), Postives = 61/64 (95.31%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGKAKPLKQPK +KK+YDE D+ANIQKKKDEEKAL+ELRAKA QKG+FGG+GLKK
Sbjct: 1  MSSKQGGKAKPLKQPKADKKEYDETDLANIQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. TAIR10
Match: AT3G16040.1 (Translation machinery associated TMA7)

HSP 1 Score: 93.6 bits (231), Expect = 4.8e-20
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGK KPLKQPK  KK+YDE DM  +QKKKDEEKAL+ELRAKA QKG+FGG+GLKK
Sbjct: 1  MSSKQGGKLKPLKQPKSGKKEYDEHDMELMQKKKDEEKALKELRAKASQKGSFGGSGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. Swiss-Prot
Match: sp|Q4SUE2|TMA7_TETNG (Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN=tma7 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-10
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MS ++GGK KPLK PK + KD D+ D+A  QK+K+++KA+  L+A+A  KG  GG+G+KK
Sbjct: 1  MSGREGGKKKPLKAPKKQSKDMDDDDVAFKQKQKEDQKAMEALKARASGKGPLGGSGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. Swiss-Prot
Match: sp|Q28GR1|TMA7_XENTR (Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 5.6e-10
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MS ++GGK KPLKQPK   KD DE ++A  QK+K+++K L E++ KA QKG   G G+KK
Sbjct: 1  MSGREGGKKKPLKQPKKSNKDMDEDEIAFKQKQKEDQKKLDEMKGKAAQKGPLTGGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. Swiss-Prot
Match: sp|Q05AK9|TMA7_DANRE (Translation machinery-associated protein 7 OS=Danio rerio OX=7955 GN=tma7 PE=3 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-09
Identity = 35/64 (54.69%), Postives = 48/64 (75.00%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MS ++GGK KPLK PK + K+ DE +MA  QK+K+++KA+ +L+AKA  KG   G G+KK
Sbjct: 1  MSGREGGKKKPLKAPKKQSKEMDEDEMAFKQKQKEDQKAMEQLKAKAAGKGPLTGGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. Swiss-Prot
Match: sp|Q9XZS3|TMA7_DROME (Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX=7227 GN=CG13364 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.2e-09
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MS ++GGK KPLK PK + KD DE DMA  QK+K+++KAL   +A A +KG   G G+KK
Sbjct: 1  MSGREGGKKKPLKAPKKDSKDLDEDDMAFKQKQKEQQKALEAAKANASKKGPLVGGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. Swiss-Prot
Match: sp|Q60QR6|TMA7_CAEBR (Translation machinery-associated protein 7 homolog OS=Caenorhabditis briggsae OX=6238 GN=CBG21705 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.0e-08
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MS +QGGKAKPLK PK  +KD  E D+   +K+++E K ++E+ AKA Q+G   G G+KK
Sbjct: 1  MSGRQGGKAKPLKAPKKGEKDLSEEDVEFKKKQQEEAKKIKEMAAKAGQRGPLLGGGIKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. TrEMBL
Match: tr|A0A0A0L4M8|A0A0A0L4M8_CUCSA (F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.2e-22
Identity = 60/64 (93.75%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1   MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
           MSSKQGGKAKPLKQPKV+KKDYDEVDMAN+QKKKDEEKAL+ELRAKAQQKG FGGAGLKK
Sbjct: 46  MSSKQGGKAKPLKQPKVDKKDYDEVDMANMQKKKDEEKALKELRAKAQQKGTFGGAGLKK 105

Query: 61  SGKK 65
           SGKK
Sbjct: 106 SGKK 109

[Close]

BLAST of Carg24770 vs. TrEMBL
Match: tr|A0A2P5ELN0|A0A2P5ELN0_9ROSA (Translation machinery associated TMA OS=Trema orientalis OX=63057 GN=TorRG33x02_177400 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-21
Identity = 58/64 (90.62%), Postives = 64/64 (100.00%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGKAKPLKQPKV+KK+YDEVDMANIQKKK+EEKAL+EL+AKAQQKG+FGGAGLKK
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGAGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. TrEMBL
Match: tr|A0A2R6PV00|A0A2R6PV00_ACTCH (Translation machinery-associated protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc26911 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-21
Identity = 58/64 (90.62%), Postives = 62/64 (96.88%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGKAKPLKQPKV+KK+YDE DMAN+QKKKDEEKAL+ELRAKAQQKGAFGG GLKK
Sbjct: 1  MSSKQGGKAKPLKQPKVDKKEYDETDMANLQKKKDEEKALKELRAKAQQKGAFGGTGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. TrEMBL
Match: tr|W9S4Y5|W9S4Y5_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000574 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 56/64 (87.50%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGKAKPLKQPK +KKDYDEVD+AN+QKKKDEEKAL++L+AKAQQKGAFGG+GLKK
Sbjct: 1  MSSKQGGKAKPLKQPKADKKDYDEVDLANLQKKKDEEKALKDLKAKAQQKGAFGGSGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

[Close]

BLAST of Carg24770 vs. TrEMBL
Match: tr|A0A2P5AEL5|A0A2P5AEL5_PARAD (Translation machinery associated TMA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_339940 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-20
Identity = 57/64 (89.06%), Postives = 63/64 (98.44%), Query Frame = 0


Query: 1  MSSKQGGKAKPLKQPKVEKKDYDEVDMANIQKKKDEEKALRELRAKAQQKGAFGGAGLKK 60
          MSSKQGGKAKPLKQPK +KK+YDEVDMANIQKKK+EEKAL+EL+AKAQQKG+FGGAGLKK
Sbjct: 1  MSSKQGGKAKPLKQPKADKKEYDEVDMANIQKKKEEEKALKELKAKAQQKGSFGGAGLKK 60

Query: 61 SGKK 65
          SGKK
Sbjct: 61 SGKK 64

The following BLAST results are available for this feature:

BLAST of Carg24770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924253.1	2.9e-23	100.00	translation machinery-associated protein 7-like [Cucurbita moschata]	[more]
XP_022980452.1	2.9e-23	100.00	translation machinery-associated protein 7-like [Cucurbita maxima]	[more]
XP_022145738.1	5.5e-22	95.31	translation machinery-associated protein 7 [Momordica charantia]	[more]
KGN56723.1	9.3e-22	93.75	F9L1.21 protein [Cucumis sativus]	[more]
XP_022943547.1	2.1e-21	92.19	translation machinery-associated protein 7-like isoform X2 [Cucurbita moschata] ...	[more]

BLAST of Carg24770 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15270.1	2.7e-23	85.94	Translation machinery associated TMA7	[more]
AT3G16040.1	4.8e-20	81.25	Translation machinery associated TMA7	[more]

BLAST of Carg24770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q4SUE2\|TMA7_TETNG	3.3e-10	54.69	Translation machinery-associated protein 7 OS=Tetraodon nigroviridis OX=99883 GN...	[more]
sp\|Q28GR1\|TMA7_XENTR	5.6e-10	56.25	Translation machinery-associated protein 7 OS=Xenopus tropicalis OX=8364 GN=tma7...	[more]
sp\|Q05AK9\|TMA7_DANRE	1.2e-09	54.69	Translation machinery-associated protein 7 OS=Danio rerio OX=7955 GN=tma7 PE=3 S...	[more]
sp\|Q9XZS3\|TMA7_DROME	1.2e-09	56.25	Translation machinery-associated protein 7 homolog OS=Drosophila melanogaster OX...	[more]
sp\|Q60QR6\|TMA7_CAEBR	4.0e-08	53.13	Translation machinery-associated protein 7 homolog OS=Caenorhabditis briggsae OX...	[more]

BLAST of Carg24770 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4M8\|A0A0A0L4M8_CUCSA	6.2e-22	93.75	F9L1.21 protein OS=Cucumis sativus OX=3659 GN=Csa_3G130290 PE=4 SV=1	[more]
tr\|A0A2P5ELN0\|A0A2P5ELN0_9ROSA	4.0e-21	90.63	Translation machinery associated TMA OS=Trema orientalis OX=63057 GN=TorRG33x02_...	[more]
tr\|A0A2R6PV00\|A0A2R6PV00_ACTCH	4.0e-21	90.63	Translation machinery-associated protein OS=Actinidia chinensis var. chinensis O...	[more]
tr\|W9S4Y5\|W9S4Y5_9ROSA	1.2e-20	87.50	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_000574 PE=4 SV=1	[more]
tr\|A0A2P5AEL5\|A0A2P5AEL5_PARAD	1.2e-20	89.06	Translation machinery associated TMA OS=Parasponia andersonii OX=3476 GN=PanWU01...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015157	TMA7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24770-RA	Carg24770-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..45
IPR015157	Translation machinery associated TMA7	PFAM	PF09072	TMA7	coord: 3..64 e-value: 9.3E-24 score: 83.9
IPR015157	Translation machinery associated TMA7	PANTHER	PTHR28632	FAMILY NOT NAMED	coord: 1..64

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24770	Csa3G130290	Cucumber (Chinese Long) v2	carcuB0193
Carg24770	MELO3C006303	Melon (DHL92) v3.5.1	carmeB0179
Carg24770	ClCG05G003220	Watermelon (Charleston Gray)	carwcgB0166
Carg24770	CSPI03G10740	Wild cucumber (PI 183967)	carcpiB0200
Carg24770	Cucsa.256550	Cucumber (Gy14) v1	carcgyB0213
Carg24770	CmaCh14G019020	Cucurbita maxima (Rimu)	carcmaB0234
Carg24770	CmoCh14G019550	Cucurbita moschata (Rifu)	carcmoB0243
Carg24770	Lsi05G018520	Bottle gourd (USVL1VR-Ls)	carlsiB156
Carg24770	Cp4.1LG03g18040	Cucurbita pepo (Zucchini)	carcpeB0250
Carg24770	CsGy3G010810	Cucumber (Gy14) v2	carcgybB0187
Carg24770	CsaV3_3G010850	Cucumber (Chinese Long) v3	carcucB0200
Carg24770	Cla97C05G083860	Watermelon (97103) v2	carwmbB0179
Carg24770	Bhi01G000153	Wax gourd	carwgoB0224

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24770	Silver-seed gourd	carcarB211
Carg24770	Cucurbita maxima (Rimu)	carcmaB0235
Carg24770	Cucurbita maxima (Rimu)	carcmaB0236
Carg24770	Cucurbita moschata (Rifu)	carcmoB0244
Carg24770	Cucurbita pepo (Zucchini)	carcpeB0251
Carg24770	Melon (DHL92) v3.6.1	carmedB0183
Carg24770	Watermelon (97103) v1	carwmB0164