Lsi05G015040 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.CCGGAGCCTGCCAAGGAGGCGCCGCCACCTCCGCCGCCCTCTACCGCTGCCAGTGGTGGAGGGAACTTGTTTCTGGTCGACGTCGGGCTGAGATTTTTGCTTTTTGCGGCGGCAGTGTCGAGTGTGGTGGTCATGGTCACCAGTAAAGAAACCGTCGTCAGTAAGCTCCGGGGTGTCCCGCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCATTCCCCTGCTTTCATGTGAGGGTTTTTTTTAGATGTTGATTTTTAGTTCTAGGGGAGTTTTTAAAAATAGAAGAATGAGGAAAACTATTTACATAAAATAGCAAAATTTTTAGATGGTTGTGATAGACACTAATAGAAGTCTACATGCTGATAGAAGTCTATAAAGATCTATCAGTATTTTTTTTTGCTATTTTTTGTAAATAATTTGACCGTTTTTCTATTTGTAAAAATTTTCCTAGTTTATATAAATCTTAAATTTAGTTATTTATTTTTTATCGTAATTAATTAAATAATAATTTTTATTTAAAAAACATCTGAAATTAATTTAAAAAATTAATAGATAATAAGATGATTTTTTTTATAAAAAAAATCAAGAATAAACTAGAAGTGTGGTGTTACAAAAAAAAATAGAAGTGGGAATAAATTTAGAATTTATTGAAAATATAGAATTAAAATTGAATGGAAAACTTTAAATTACATAAATCAAAATAATATTTCACCTTTTTTTCAAATCTAAAAATTATTCCAAAATAAAAACTGAAAAAAAAAACAAGGAAAATGTTCCCACATTAAAAAAAAAAAATCAAACTATTTACATAAAATAGCAAAAAGAAATATTGATAGACATTAATAGACTTTTATCATTACTATTACTAATAGACTCTGATAACCTTCTATCAGCATCTATCACAACTATCTAAATTTTTTTTTTATTTTGCATAAATATTTACTCTTATTTTTCTATTTTTAAAAATTCTCTTAAAAACAATTCTTGTATGTATTTGTTCTATCAATTTGAATTTATATCTACTTTTCTTTTATTTTAATTTAGAATGACTTGTCAATATCATATTAAACCTAAGTATCGTTTAACTGACATAAAGTTTTATTATCAAGTCCAAGGTGGGTTAAAAGTATTTTTTTTTTTTTTTAAAGAAGGGAAGTTTAAATATTTGAAAGTATATAAATCTGATATTTATGAATTTTTTTTAAAGAGAGATATTTATCAAAGTTCAAATATTTTACATTTTTTTAGTTTTTCAAACATTTTTGTAATTCAATAAATACGAATTTCTTACAACCTACTAATTTAACCATATAAATTATTCTTTTAACAAATGGTCGATATGGTATATACAGATTGTTTTTATGTATTTTCTTCATACTCTAACAGTTTTTCATTTCAAAATAAAATAGGAAACAAAGAAATATATATTAAGAATTATACTATTTAAAACAAATTTAAAAGACGACCATATTAACAATTTGTGATGGTGCGAGAAAATAAGAGAAATTTCTATAAATAAAAAAATATCAAACTATTTACAGATATAGAAAAATTTTATTGTCCATCAGTGATAGAGCGCGATATAATTTTATCGCGATCTATCACAAATAGACTGTAAAATTTGTCTATATTTATAAATAGTTTGACTTATTTTTCTGTATTTAAAAAAAACCTTAAGAATAAATTGAAATAATAATTGATTGTTTGCATGAAAGCTAAATTAAATAATATTATTTGTCATTTACACGTATAATAATATAAATAAAGACCCCGAGAGAAGTTGTATGGTGACCAAAATAGTCCAAATTCAACTCCTTAATCATTAACCTTATTCTTTTAAAAACATATATACATAATAAAGCCAATAATAAATATTATTTAGCAAGCATAGCTTAGAAGTAGGCCTATTTTTTTGCTTTTTCTTTTTTTCTTTTTGCTCTTTCCTTTGTCTTTTCTTTTTTTTTTTTTTATTGAGAAAAATTATAAGTAGCCAGCTTGATTTTTCGTTTATTGATTTATTTCGTCGTTTAATTCATATTTTCCTTTAAAAAAATTAATTTATATTTTATTTTAGGATTGTTTTCAAATATAAAAAATGTGTCAAACTATTTATAAATATAGAAAATTTTTACTATCTATCAGCGATAGACAACGATAGAAGTTTATCGCGATTAAATTTTTCTATATTTATAAATAATTTGATTTTTTTTTTTTTGTATTTATAATAATTTTCCTTTATTTTATGGATTTTTATATTTATTTTATATATTTTAGTAAAACTACGCATTTAAATATTTTTTCCGTTTCCAAATTTCACAGTAATAATGCGTTGAGTTTCTTTGTTACTAATTTTTTTTAGGTTAAAATCTCAAACTTTTTTAATAATAATAATTTTCAAGATAGAAAATACAAATAAACAAAAATATAAGAAAATCCAAAATACAAGATCTAAAATAGTATTTTAACTACTTTTATATATTGTATTTTTAACCGTGCTAGTGATCAAGATTAAAAAGGAACAAAACTAACATGTATTAACGATCAAAAAGTTTGTGTAGTTCAAATCTCTCCACCCCAATTGCACTAAAAAAATTATGCAATACAATTTAAACATCGATTATTTATTTACTTTTTAATTCCTTTTAGTTTAACAAACACATGTAATTGAAAGATCTAAAGTTTTTAAGTTTTTAATTAAGAATACAAATACTTAAATAAGTTGGACTATATTCACGCAAATTTTAGTTAAGCTTAACTTCACGAAGCATGAAACAAAATAAACGGTTAATAAATTGTGTTAGAATTAATTTAGTTTGAATATATATTTTTTAAGCGAAAGTCTAGTTCAAAAAGATTCAAACTTCTAACTTTTTGATTGAGATCATATGTTTTAATTAGTTAAATTATAAGGAAATTGTTGTGTAGAGAAAAAAAAAACAAAACTAATTACACATATAGAAAAAAATGCACTCCATGCTTTTTTATTTCTTTTTTTTTCTATATGTGTAATTAATTTTATTTTTTTTCTATTTGTGAAAAGACCCCGTTTTCTAAAATGAATAACTTTTTAGTTCATTTAAAAGGAATTTTTCTGAACAATTATTTGATTTTTTAGTTCATTTATTTAATTAAGCTGTTTAAATGCATTTTTTTGTTAAAAAAAATATATCCGAAATTAAGGGTGTGAAATTAAATTTTGCAGATACTTCGTGGCTGCATTATCGTTGGCGGCACTTTACGGTCTCGTTACTGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTCCATTTTGCCGTTGGGGATACGGTAATTTCTCTCTCTACTATTCACCGTTAATTAACGGCGATTAAATTTAAATATTTTAATATAAATATTATAACATAATTTTTAATCTATATTTTTAAAGAAATTATTTTAAATGACAAAATGCTTAAAATATTTACAAATATAGCAAAATTTCATTGTCTATCTACGATAGACTACAATTGATTACTATATGTTTCGATAGATTATAGATAAGCACATATAGTAGTTTATTGTGATCTATCGCAGATAGACAATAAAATTTTGCTATATTTATAAATATTTTGGTTCATTTATGTTTATTTAGAAGTGCCCTGTACTTTTACTTATTTTCTTTTTGTGTTTTTGTAGGAATACTAGTTTTGTTTTTATCTATATTTTAGACGTAATTTAACACATCATTCAAAAAGGAAAAATAAATAAAATTTTGAGATTTTCATGTCTGATTTTAATTTTTTTACTATAATCTTTAAGACTTAGTATATTAAAAAAAAATTAAAAATTATGTTTGCACTATAATAGTTCTTTACAATGGAAAAAAAAAATGAAACCTATGAGCTCTCTTTCATGTTACTGTCGTAGCTAATTTATAAATATATTAATAATGTAATTTTAATGCAACAATATAATATAAAATTAACATAAATAACATGCACATATTTTATTGGTTAAGACATTTATTTTAAGTCAGCTCCACATTTATTCAATTTAAAAAAAAACCTGTATAAAGTTATACAAATATGTCTGTCAGATAAATCTAAAAATATCTCTAAAACTTTTTTTTTTGTTTTTTTATTTTAAGTTATACTTATTTTCTAACAATTTCTTAATCGTGATTTTCATATTTTTTTTCTAAGTAAACAAGTCAATTAATCTTAGTCAAATTTTAAAAATAAAAACTATTTTTTTTAAGTATTCAAAAGTTTGTTTGAATTTTGAATGTACTTCTTTAAAGGTAGATAATAAAACACATAAATTAATAGACACATATAATATTTATTGTCTTACTTTTAAAAAATTAAATGATTATCAAATGAAATAATACAAAATTCTGTCAAAAAGTTACAAAATTCGAATTTCTTTCTTATACTTAAAAAGATTTCACAAAAATTAATGAATTGTTTGGAAATTGTGTGTAGTTGATATTGGGGGTGGTAGCCTCGGCCACAGGGGCTGCAGGTGGAGTTGCATACATAGGATTAAAAGGGAACAAGCACGTGCGATGGGACAAAGTGTGTTACGCCTTTGGCAAATTCTGCCGCCACGTCGGCGGCGCTTTGGCGACGTCACTTTTTGCCTCTGTCGTGCTGGTGTTGCTCGTTTGGATCTCTATCATCTCTCTCCACGCGCGAATTCGCAAGTAG CCGGAGCCTGCCAAGGAGGCGCCGCCACCTCCGCCGCCCTCTACCGCTGCCAGTGGTGGAGGGAACTTGTTTCTGGTCGACGTCGGGCTGAGATTTTTGCTTTTTGCGGCGGCAGTGTCGAGTGTGGTGGTCATGGTCACCAGTAAAGAAACCGTCGTCAGTAAGCTCCGGGGTGTCCCGCCGGGCTTCCCTAATGACTTATACTTCGTGGCTGCATTATCGTTGGCGGCACTTTACGGTCTCGTTACTGCCCTCGCCTCCGTTTCCTTGATATTGGGGGTGGTAGCCTCGGCCACAGGGGCTGCAGGTGGAGTTGCATACATAGGATTAAAAGGGAACAAGCACGTGCGATGGGACAAAGTGTGTTACGCCTTTGGCAAATTCTGCCGCCACGTCGGCGGCGCTTTGGCGACGTCACTTTTTGCCTCTGTCGTGCTGGTGTTGCTCGTTTGGATCTCTATCATCTCTCTCCACGCGCGAATTCGCAAGTAG CCGGAGCCTGCCAAGGAGGCGCCGCCACCTCCGCCGCCCTCTACCGCTGCCAGTGGTGGAGGGAACTTGTTTCTGGTCGACGTCGGGCTGAGATTTTTGCTTTTTGCGGCGGCAGTGTCGAGTGTGGTGGTCATGGTCACCAGTAAAGAAACCGTCGTCAGTAAGCTCCGGGGTGTCCCGCCGGGCTTCCCTAATGACTTATACTTCGTGGCTGCATTATCGTTGGCGGCACTTTACGGTCTCGTTACTGCCCTCGCCTCCGTTTCCTTGATATTGGGGGTGGTAGCCTCGGCCACAGGGGCTGCAGGTGGAGTTGCATACATAGGATTAAAAGGGAACAAGCACGTGCGATGGGACAAAGTGTGTTACGCCTTTGGCAAATTCTGCCGCCACGTCGGCGGCGCTTTGGCGACGTCACTTTTTGCCTCTGTCGTGCTGGTGTTGCTCGTTTGGATCTCTATCATCTCTCTCCACGCGCGAATTCGCAAGTAG PEPAKEAPPPPPPSTAASGGGNLFLVDVGLRFLLFAAAVSSVVVMVTSKETVVSKLRGVPPGFPNDLYFVAALSLAALYGLVTALASVSLILGVVASATGAAGGVAYIGLKGNKHVRWDKVCYAFGKFCRHVGGALATSLFASVVLVLLVWISIISLHARIRK
BLAST of Lsi05G015040 vs. Swiss-Prot
Match: CSPL7_VITVI (CASP-like protein 1D1 OS=Vitis vinifera GN=VIT_05s0020g01830 PE=2 SV=2) HSP 1 Score: 150.2 bits (378), Expect = 1.9e-35 Identity = 94/192 (48.96%), Postives = 119/192 (61.98%), Query Frame = 1
BLAST of Lsi05G015040 vs. Swiss-Prot
Match: CSPL5_RICCO (CASP-like protein 1D1 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 1.8e-33 Identity = 92/194 (47.42%), Postives = 121/194 (62.37%), Query Frame = 1
BLAST of Lsi05G015040 vs. Swiss-Prot
Match: CSPLD_POPTR (CASP-like protein 1D1 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=2) HSP 1 Score: 143.3 bits (360), Expect = 2.4e-33 Identity = 88/189 (46.56%), Postives = 122/189 (64.55%), Query Frame = 1
BLAST of Lsi05G015040 vs. Swiss-Prot
Match: CSPL7_SOYBN (CASP-like protein 1D2 OS=Glycine max PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.6e-32 Identity = 84/177 (47.46%), Postives = 115/177 (64.97%), Query Frame = 1
BLAST of Lsi05G015040 vs. Swiss-Prot
Match: CSPL8_SOYBN (CASP-like protein 1D1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.9e-31 Identity = 82/177 (46.33%), Postives = 112/177 (63.28%), Query Frame = 1
BLAST of Lsi05G015040 vs. TrEMBL
Match: A0A0A0L552_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151480 PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 5.3e-56 Identity = 135/192 (70.31%), Postives = 147/192 (76.56%), Query Frame = 1
BLAST of Lsi05G015040 vs. TrEMBL
Match: W9S0X6_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_008467 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 7.4e-34 Identity = 95/193 (49.22%), Postives = 124/193 (64.25%), Query Frame = 1
BLAST of Lsi05G015040 vs. TrEMBL
Match: M5XMA7_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa011684mg PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.7e-33 Identity = 99/190 (52.11%), Postives = 122/190 (64.21%), Query Frame = 1
BLAST of Lsi05G015040 vs. TrEMBL
Match: A0A0L9TTQ7_PHAAN (CASP-like protein OS=Phaseolus angularis GN=LR48_Vigan01g310500 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.8e-32 Identity = 91/176 (51.70%), Postives = 114/176 (64.77%), Query Frame = 1
BLAST of Lsi05G015040 vs. TrEMBL
Match: A0A0S3R9I1_PHAAN (CASP-like protein OS=Vigna angularis var. angularis GN=Vigan.01G526800 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.8e-32 Identity = 91/176 (51.70%), Postives = 114/176 (64.77%), Query Frame = 1
BLAST of Lsi05G015040 vs. TAIR10
Match: AT4G15610.1 (AT4G15610.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 134.8 bits (338), Expect = 4.8e-32 Identity = 82/166 (49.40%), Postives = 107/166 (64.46%), Query Frame = 1
BLAST of Lsi05G015040 vs. TAIR10
Match: AT3G06390.1 (AT3G06390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 111.3 bits (277), Expect = 5.6e-25 Identity = 81/192 (42.19%), Postives = 115/192 (59.90%), Query Frame = 1
BLAST of Lsi05G015040 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 64.7 bits (156), Expect = 6.0e-11 Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 1
BLAST of Lsi05G015040 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 57.8 bits (138), Expect = 7.4e-09 Identity = 53/159 (33.33%), Postives = 74/159 (46.54%), Query Frame = 1
BLAST of Lsi05G015040 vs. TAIR10
Match: AT4G15620.1 (AT4G15620.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 55.1 bits (131), Expect = 4.8e-08 Identity = 45/163 (27.61%), Postives = 78/163 (47.85%), Query Frame = 1
BLAST of Lsi05G015040 vs. NCBI nr
Match: gi|659076669|ref|XP_008438804.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Cucumis melo]) HSP 1 Score: 229.6 bits (584), Expect = 4.0e-57 Identity = 138/193 (71.50%), Postives = 147/193 (76.17%), Query Frame = 1
BLAST of Lsi05G015040 vs. NCBI nr
Match: gi|778678765|ref|XP_011651032.1| (PREDICTED: CASP-like protein 1D1 [Cucumis sativus]) HSP 1 Score: 225.3 bits (573), Expect = 7.6e-56 Identity = 135/192 (70.31%), Postives = 147/192 (76.56%), Query Frame = 1
BLAST of Lsi05G015040 vs. NCBI nr
Match: gi|657996725|ref|XP_008390731.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Malus domestica]) HSP 1 Score: 159.8 bits (403), Expect = 3.9e-36 Identity = 102/190 (53.68%), Postives = 125/190 (65.79%), Query Frame = 1
BLAST of Lsi05G015040 vs. NCBI nr
Match: gi|694322148|ref|XP_009352214.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Pyrus x bretschneideri]) HSP 1 Score: 155.2 bits (391), Expect = 9.6e-35 Identity = 100/190 (52.63%), Postives = 124/190 (65.26%), Query Frame = 1
BLAST of Lsi05G015040 vs. NCBI nr
Match: gi|694386664|ref|XP_009369105.1| (PREDICTED: CASP-like protein POPTRDRAFT_820933 [Pyrus x bretschneideri]) HSP 1 Score: 154.1 bits (388), Expect = 2.1e-34 Identity = 99/189 (52.38%), Postives = 123/189 (65.08%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |