ClCG05G005810 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCAGCCGAGCCAGAGTCTGCCAAGGCGGCGTCGCCGCCTCCGCCACCCTCTACCGCTGCCAGTGGTGGAGTGAACTTGTCTGTAGTCGATGTCGGGCTGAGATTTTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATAGTCACTAGTAAACAGACCGTCGTCAATAAGCTCCGGGGTGTCCCGCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCATTCCCCTGCTTTCATGTGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTTCTTCTTTCAAATTTTGGCTGTAATTTTGTTAAATGAATCAAACTACTTGTAAAACTTCATTGTCGATAGTAGTCTATCGTAGACTATTATAGTAATATTTTACTATAATTTGTAAATATCTTACAAAGTTTAGAACTAAAATTAAACATTATATATATATAGATTAAAATTGAACAAATCTTCAAATCACATAAATCAAAATAAACTAATTTTTTTTTTCAAATCTAAAAAAGTCTGAAAAAGAAAAATGACAAAAATAAAAACAAGTCTAGTACACAATTTCTTTAGAAATTTTAATTTATATATACTATTTACAAATATAAAAAAATTTTATAGACAGTTATAGACTTCTATCGCTTGAACGATAAATTACAATATATGAGTAATAGAAGTCTACCATATTCTATCTATGTTAGACAATAAATTTTTTAATATATTTATAAATAATTTAATATTTTTCATATTTATAATAATTTCTCTTTTTAACTTGTTCAACTCTAAAAAATAGTTTAAAAAACAATTTATACTTTCACTTTAGAAAGATATATTCAAACCAAATTAAATCTAACAAAATTTACTAACGAGTTGTTTCATTTCATGCTTAACTGGTGAATAACGTGTAGCCAACTTATTTAAGTATTTATATTCTTAATTAAGAGCATAAAAAAGTATAAATCTTCCAATTTCATTTGTTTGTTAAACTAAAAAGAAAGAGTAATTGAATAATTGACTTTTAAATTTTATTGGATGATATTTTTAAAATATAATTGGAAAATTCAAACCACATAAATATTCTGAGCCGTTAACACATATTTAAGGCAAGTTAAATAATGTAACTCTATTTGATTAGTTTTGTTACTTTTTGATCTTCACTTTCCCCGTTAAAATTTAAAAATGCAATATATAACAATTCAAAATTATTATCTATTTCATTCTCATTTTTACCATTATGGACCTAGTTAAAATACCAATGAGATTTGTCCTATTTTTGTTTATGTGTCTTTTTCTTTAAATAATTGTTATTATTAAAAAAATTCATAAAATTAACATATTAAATTTGAAATTTATTAAAAATATATAAACTAATTTTAAGATGTATTAAAAAGTAAAGAAACTATAATTGATATTTAAAAAATATAAATATAAAAATAAAATCGAATCTAAATAAAAAAATCAAAATGATATTTTGACCTAAAAAATTCAGTAACAAAAGGAATTCAACGCATAGTTGTGAAAATGGAAAAAAATATTTAAATGCGTTTTCTCACTAAAATATATAAAATAAATATAAGATATGACTTGAACTTTTTTTTTTTTAAAGGAAAATATGGTTAAAGGTTGAATAAACTTGCATGTATAATAATATGACGAAATTAAATAAACAAATAAAAGAAAAATCAAGATGGCTACTTCTAACTTTTTCTCAAAAAATAAAAATAATAATAAATAAATAAAAGAAACGAAACGAAAGAAGAAAGAGAAAAAAAAGAAAAAGAAAAAGAAAAAAAAAAAAAAAAAGCTACTTCTAAGCTATGCTTTGCTAAATAATCTTTTATTCTTGGCTTTATTATATAATATTTCTTTTTTAAGAATAGGTTTATGATTAAGGAGTTGAATTTGAACTATTTTGGTCACCAAACAACTTCTCTCGGGGGTCTTTTTTATATATTATATGTGCAAATGGCAAATAAGATTATTCAATTTAACTTTCATGCAAACAATCAATTATTATCCCAATTTATTCTTACACCATACCATCACAAGTTGTTAATATGGTCGTCTTTTAAGTCTATTTTAAAAATTAAAGTATACCTCTTAATATATATTTCCTTGTTTCCTAATTTGATTTTGATTATATAAACGGTAAATACATAAAAAGTTTAAAACAATCTATATACCGTATCGATCACCTATTAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATTAAAGGATAAAACTACTAAAAAAATATTTATAAATAATAGTAAAATATCTGATAAAAAAAATTATTATATTTATGAATATTTTATTTTTCTACATTTAAAAATAGCGAAATATTTAGTTAAATTTAGTACTATTATATTTATATGGACTGGTTTTCCTAAACTGATCCCATTTTTAGTTCATCTGATGGGAATTTTTCTGAAACAATGATTTGATTATTTTAAATTCATTTGTTTAATTTAATTGTTTAAATGCTTTTTTTTTTTTTTTTATATATATATAGATATAAATAAAACTGAAATTAAGGGTGTGGGATTAAATTTTACAGATACTTCGTGGCTGCATTATCATTGGCAGCACTTTACGGTCTCGTTACTGCCCTCGCCTCCGTTTCCGTCATCGCCAAGCCCAATCTCTCCACCAAATTCTTGCTTCATTTTGCCGTTTGGGATACGGTATTTTCTCTCTCTCTCTACTATTCACCGTGAATTAACGGCGATTAAATTTGAATATTTTAATATAAATATTCTATACATAATTTTAACACTTAATTTTTTTAATCTATACTTTTACTTGTTTTCTTTTTATCTATATTTTAAACATCATTCAAAATGGAAAACAAATAAAATTTTTTAGATTGATCTTCATTTTTCTTTCTTTAGGTCAACCCCATATTTGTTCAATTAAAAAAAATAAATAAAGCTAATATATTTATTACTAGGAGAAATCTAAAAATATTTCTAAGACTTTTTGTTCCAAGACGTATAATATTAGCTATATCATTTGGTAAATTATTAAAAAGAAAAAAAAAAAGAAAAAACAAAAATTAGGATATGTTTGACAACAATTAGACTTTTTTGTTTTTTATTTTTTAAAATTATGTTTATTTTCTCACATCTTTTTCCTAAGTATGGAAGTGAATTAATCTTAGTTAAATTCTACAAATAAAAACTGTTTTTTATTCTAATTTTAAAAAATTTGCTTGAATTTTGAATATTCTCCTTAAATGTAGACAATAAAAAGTAAATTTATATTCAAAAGATTTCAAAAAAATTCATGGATTGTTTGGAAATTGTGTGCAGTTGATATTGGGGGTGGTAGCCTCGGGCACAGGTGCAGCAGGTGGAGTCGCATACATAGGATTAAAAGGGAACTTGCACGTGCGATGGGACAAAGTGTGCTACGCCTTCGATAAATTCTGCCGCCACGTAGGCGGCGCTTTGGCGGCGTCACTTTTTGCCTCCGTCGTGCTGGTGTTGCTCGTTTGGATCTCTATTATATCTCTCCACGCGCGAATTCGCAAGTAGACTTCACGCTCCTCTTCTCAAGCCTTTATTACCGCGCGTGTTTGTTACTGTTCAGGATTTTATTGTAAATGTGTTGCTTTGTGGTTTCGCCCATTTATAAACATGTTTGTTCCCTAG ATGGCCTCAGCCGAGCCAGAGTCTGCCAAGGCGGCGTCGCCGCCTCCGCCACCCTCTACCGCTGCCAGTGGTGGAGTGAACTTGTCTGTAGTCGATGTCGGGCTGAGATTTTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATAGTCACTAGTAAACAGACCGTCGTCAATAAGCTCCGGGGTGTCCCGCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCATTCCCCTGCTTTCATATACTTCGTGGCTGCATTATCATTGGCAGCACTTTACGGTCTCGTTACTGCCCTCGCCTCCGTTTCCGTCATCGCCAAGCCCAATCTCTCCACCAAATTCTTGCTTCATTTTGCCGTTTGGGATACGTTGATATTGGGGGTGGTAGCCTCGGGCACAGGTGCAGCAGGTGGAGTCGCATACATAGGATTAAAAGGGAACTTGCACGTGCGATGGGACAAAGTGTGCTACGCCTTCGATAAATTCTGCCGCCACGTAGGCGGCGCTTTGGCGGCGTCACTTTTTGCCTCCGTCGTGCTGGTGTTGCTCGTTTGGATCTCTATTATATCTCTCCACGCGCGAATTCGCAAGTAGACTTCACGCTCCTCTTCTCAAGCCTTTATTACCGCGCGTGTTTGTTACTGTTCAGGATTTTATTGTAAATGTGTTGCTTTGTGGTTTCGCCCATTTATAAACATGTTTGTTCCCTAG ATGGCCTCAGCCGAGCCAGAGTCTGCCAAGGCGGCGTCGCCGCCTCCGCCACCCTCTACCGCTGCCAGTGGTGGAGTGAACTTGTCTGTAGTCGATGTCGGGCTGAGATTTTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATAGTCACTAGTAAACAGACCGTCGTCAATAAGCTCCGGGGTGTCCCGCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCATTCCCCTGCTTTCATATACTTCGTGGCTGCATTATCATTGGCAGCACTTTACGGTCTCGTTACTGCCCTCGCCTCCGTTTCCGTCATCGCCAAGCCCAATCTCTCCACCAAATTCTTGCTTCATTTTGCCGTTTGGGATACGTTGATATTGGGGGTGGTAGCCTCGGGCACAGGTGCAGCAGGTGGAGTCGCATACATAGGATTAAAAGGGAACTTGCACGTGCGATGGGACAAAGTGTGCTACGCCTTCGATAAATTCTGCCGCCACGTAGGCGGCGCTTTGGCGGCGTCACTTTTTGCCTCCGTCGTGCTGGTGTTGCTCGTTTGGATCTCTATTATATCTCTCCACGCGCGAATTCGCAAGTAG MASAEPESAKAASPPPPPSTAASGGVNLSVVDVGLRFLLFAAAVSSVVVIVTSKQTVVNKLRGVPPGFPVQAKFDHSPAFIYFVAALSLAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASGTGAAGGVAYIGLKGNLHVRWDKVCYAFDKFCRHVGGALAASLFASVVLVLLVWISIISLHARIRK
BLAST of ClCG05G005810 vs. Swiss-Prot
Match: CSPL5_RICCO (CASP-like protein 1D1 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 6.3e-57 Identity = 111/194 (57.22%), Postives = 144/194 (74.23%), Query Frame = 1
BLAST of ClCG05G005810 vs. Swiss-Prot
Match: CSPL7_VITVI (CASP-like protein 1D1 OS=Vitis vinifera GN=VIT_05s0020g01830 PE=2 SV=2) HSP 1 Score: 221.1 bits (562), Expect = 1.1e-56 Identity = 111/194 (57.22%), Postives = 140/194 (72.16%), Query Frame = 1
BLAST of ClCG05G005810 vs. Swiss-Prot
Match: CSPLD_POPTR (CASP-like protein 1D1 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=2) HSP 1 Score: 216.1 bits (549), Expect = 3.5e-55 Identity = 102/171 (59.65%), Postives = 137/171 (80.12%), Query Frame = 1
BLAST of ClCG05G005810 vs. Swiss-Prot
Match: CSPL7_SOYBN (CASP-like protein 1D2 OS=Glycine max PE=2 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.4e-51 Identity = 104/180 (57.78%), Postives = 131/180 (72.78%), Query Frame = 1
BLAST of ClCG05G005810 vs. Swiss-Prot
Match: CSPL8_SOYBN (CASP-like protein 1D1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.2e-49 Identity = 100/180 (55.56%), Postives = 128/180 (71.11%), Query Frame = 1
BLAST of ClCG05G005810 vs. TrEMBL
Match: A0A0A0L552_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151480 PE=3 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 2.1e-83 Identity = 162/197 (82.23%), Postives = 176/197 (89.34%), Query Frame = 1
BLAST of ClCG05G005810 vs. TrEMBL
Match: W9S0X6_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_008467 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.9e-55 Identity = 114/195 (58.46%), Postives = 144/195 (73.85%), Query Frame = 1
BLAST of ClCG05G005810 vs. TrEMBL
Match: A0A067L687_JATCU (CASP-like protein OS=Jatropha curcas GN=JCGZ_02018 PE=3 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 7.1e-55 Identity = 110/192 (57.29%), Postives = 144/192 (75.00%), Query Frame = 1
BLAST of ClCG05G005810 vs. TrEMBL
Match: M5XMA7_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa011684mg PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.3e-53 Identity = 124/201 (61.69%), Postives = 145/201 (72.14%), Query Frame = 1
BLAST of ClCG05G005810 vs. TrEMBL
Match: I1M1C5_SOYBN (CASP-like protein OS=Glycine max GN=GLYMA_13G215500 PE=3 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 3.1e-50 Identity = 108/197 (54.82%), Postives = 136/197 (69.04%), Query Frame = 1
BLAST of ClCG05G005810 vs. TAIR10
Match: AT4G15610.1 (AT4G15610.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 183.0 bits (463), Expect = 1.8e-46 Identity = 98/181 (54.14%), Postives = 126/181 (69.61%), Query Frame = 1
BLAST of ClCG05G005810 vs. TAIR10
Match: AT3G06390.1 (AT3G06390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 173.7 bits (439), Expect = 1.1e-43 Identity = 93/196 (47.45%), Postives = 135/196 (68.88%), Query Frame = 1
BLAST of ClCG05G005810 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 102.8 bits (255), Expect = 2.4e-22 Identity = 61/174 (35.06%), Postives = 101/174 (58.05%), Query Frame = 1
BLAST of ClCG05G005810 vs. TAIR10
Match: AT4G20390.1 (AT4G20390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18 Identity = 55/155 (35.48%), Postives = 84/155 (54.19%), Query Frame = 1
BLAST of ClCG05G005810 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 87.8 bits (216), Expect = 8.1e-18 Identity = 51/165 (30.91%), Postives = 89/165 (53.94%), Query Frame = 1
BLAST of ClCG05G005810 vs. NCBI nr
Match: gi|659076669|ref|XP_008438804.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Cucumis melo]) HSP 1 Score: 321.2 bits (822), Expect = 1.2e-84 Identity = 166/198 (83.84%), Postives = 177/198 (89.39%), Query Frame = 1
BLAST of ClCG05G005810 vs. NCBI nr
Match: gi|778678765|ref|XP_011651032.1| (PREDICTED: CASP-like protein 1D1 [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 3.0e-83 Identity = 162/197 (82.23%), Postives = 176/197 (89.34%), Query Frame = 1
BLAST of ClCG05G005810 vs. NCBI nr
Match: gi|470121484|ref|XP_004296796.1| (PREDICTED: CASP-like protein 1D1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 225.3 bits (573), Expect = 9.2e-56 Identity = 119/202 (58.91%), Postives = 147/202 (72.77%), Query Frame = 1
BLAST of ClCG05G005810 vs. NCBI nr
Match: gi|703132022|ref|XP_010105026.1| (hypothetical protein L484_008467 [Morus notabilis]) HSP 1 Score: 223.8 bits (569), Expect = 2.7e-55 Identity = 114/195 (58.46%), Postives = 144/195 (73.85%), Query Frame = 1
BLAST of ClCG05G005810 vs. NCBI nr
Match: gi|802578186|ref|XP_012069400.1| (PREDICTED: CASP-like protein 1D1 [Jatropha curcas]) HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54 Identity = 110/192 (57.29%), Postives = 144/192 (75.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |