Carg20135 (gene) Silver-seed gourd

Overview
NameCarg20135
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCASP-like protein
LocationCucurbita_argyrosperma_scaffold_168 : 325214 .. 326748 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTATATATATACACAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATGTGAGTTTTTTTTTTTCCTATTTAAATAAAAATTTAAATATTTGAAATTATATAAACCTAATATGATATTTATCAAAAACTAAAATAATATATTAAGCATATATATATATATTAAAGTAATTTCTTGCTCGAGCTCGAAAATAAAAACTCCAAATAAATTAGAAAATAAATAAATATATATTGAAAAAATTAATTTTGAAATAAAAAAGCGACAATATAATCACTTAGAATAATATTGAGGTAATTGATTGTTTATTATATGTCATTTGGACATCTAATAATATAAATAAAGACTCTCGAGAAGTTGTATGGTGACGAAAATAGTTAGACCTCTTTATAATCCAACTCGATGAACCATATATTATAATCACAAAAATTATAAAAAAAATACTAATAAAATTTAAAATTAATCTATTAAAGACATATTTATATTCATGAAAATTATTATTATTATTTATTTAATTTTGTTAAAAAATTAACTTAAATAACTAAATATAAGATTTTTTTTTAATGTTCGACCAATATTATTTATAATTATTCAGCTTGATATTCATTTATTTATTTATTGATTTTGTCATTTTGAGTTAATTTATTTAATTAAATTGTTTTAAATGCATTTAAAAACTGAAATTAATGATACGGAATTAAAATATACAGATATTTCGTGGCTGCATTATCGGTGGCTGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGGTAATTTCTCTCTCTACTATCACCGTTAAGTAACGGCGGTTAATTTAAATATTTTAATATCACTATTAATTATCACTCTAATTTTAAAACTAATATATTATCACTTTAATGTATAAATTTATTTGGAAATTGTGTGCAGTTGATATTGGGGGTGGTAGCCTCAGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACTCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGTTGTTATTTTTTTATAAAATATTGTGTTAATTATAGTTCATTTA

mRNA sequence

ATGACTATATATATACACAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGGTGGCTGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGTTGATATTGGGGGTGGTAGCCTCAGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACTCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGTTGTTATTTTTTTATAAAATATTGTGTTAATTATAGTTCATTTA

Coding sequence (CDS)

ATGACTATATATATACACAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTGCTTTTTGCGGCGGCGGTGTCGAGTGTGGTGGTCATCGTCACCAGTAAGCAGACCGTCGTCGGTAAGCTCCGGGGTGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGGTGGCTGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGGGATACGTTGATATTGGGGGTGGTAGCCTCAGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTTTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAG

Protein sequence

MTIYIHNTPKFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Homology
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BLAST of Carg20135 vs. NCBI nr
Match: XP_022955971.1 (CASP-like protein 1D1 [Cucurbita moschata])

HSP 1 Score: 298.1 bits (762), Expect = 2.0e-77
Identity = 158/160 (98.75%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALS+AALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSLAALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 196

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BLAST of Carg20135 vs. NCBI nr
Match: XP_022979933.1 (CASP-like protein 1D1 [Cucurbita maxima])

HSP 1 Score: 297.7 bits (761), Expect = 2.6e-77
Identity = 158/160 (98.75%), Postives = 159/160 (99.38%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSV ALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVTALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 196

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BLAST of Carg20135 vs. NCBI nr
Match: XP_023528553.1 (CASP-like protein 1D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 291.6 bits (745), Expect = 1.8e-75
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT
Sbjct: 37  VLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVIAKPNLSTKFLLHFAV DTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY
Sbjct: 97  ALASVSVIAKPNLSTKFLLHFAVCDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASL ASVVLVLLIWISIISLHARIRK
Sbjct: 157 AFDKFCRHIGGALAASLVASVVLVLLIWISIISLHARIRK 196

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BLAST of Carg20135 vs. NCBI nr
Match: XP_022138099.1 (CASP-like protein 1D1 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 4.5e-66
Identity = 137/160 (85.62%), Postives = 146/160 (91.25%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           +LFAAAV++VVV VTSKQTVV KLRGVPPGFPVQAKFD SPAFIYFV ALSV ALY L+T
Sbjct: 35  VLFAAAVATVVVTVTSKQTVVNKLRGVPPGFPVQAKFDDSPAFIYFVTALSVTALYSLIT 94

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
           ALASVSVI+ PNLS KFLLHFA  D LILGVVASATG AGGVAYIGLKGNSHV+W+KVCY
Sbjct: 95  ALASVSVISNPNLSAKFLLHFAFLDALILGVVASATGTAGGVAYIGLKGNSHVQWNKVCY 154

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           AFDKFCRHIGGALAASLFASVVL LLIW+S+ SLHARIRK
Sbjct: 155 AFDKFCRHIGGALAASLFASVVLALLIWLSVFSLHARIRK 194

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BLAST of Carg20135 vs. NCBI nr
Match: XP_011651032.1 (PREDICTED: CASP-like protein 1D1 [Cucumis sativus] >KGN57070.1 hypothetical protein Csa_3G151480 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 4.9e-60
Identity = 122/144 (84.72%), Postives = 131/144 (90.97%), Query Frame = 0 

Query: 36  KQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVTALASVSVIAKPNLSTK 95
           KQTVV KLRGVPPGFPV+AKFD SPAF YFVAALSVAA Y LVT L+S+ VIAKPN  TK
Sbjct: 52  KQTVVNKLRGVPPGFPVEAKFDDSPAFRYFVAALSVAAFYSLVTGLSSLFVIAKPNCHTK 111

Query: 96  FLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAAS 155
            LLH+A+WDT ILGVVASATGAAGGVAYIGLKGN+HVRWDKVCYAFDKFCRH+G +LA S
Sbjct: 112 SLLHYAIWDTFILGVVASATGAAGGVAYIGLKGNTHVRWDKVCYAFDKFCRHVGASLATS 171

Query: 156 LFASVVLVLLIWISIISLHARIRK 180
           LFASVV+VLLIWISIISLHARIRK
Sbjct: 172 LFASVVMVLLIWISIISLHARIRK 195

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BLAST of Carg20135 vs. TAIR10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 165.6 bits (418), Expect = 2.8e-41
Identity = 93/166 (56.02%), Postives = 122/166 (73.49%), Query Frame = 0 

Query: 13  VVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVA 72
           VVL ++  LFAA ++S+VV+VTSKQT    L G P   P  A+F +SPA IYFV ALSVA
Sbjct: 31  VVLRFV--LFAATLTSIVVMVTSKQTKNIFLPGTPIRIPA-AEFTNSPALIYFVVALSVA 90

Query: 73  ALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHV 132
             Y +V+   +VS   K + S   LL+ A+ D +++G+VASATGA GGVAY+GLKGN  V
Sbjct: 91  CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 150

Query: 133 RWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIR 179
           RW K+C+ +DKFCRH+GGA+A SLFASVVL+LL  IS++SL+ +IR
Sbjct: 151 RWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKIR 193

[Close]
BLAST of Carg20135 vs. TAIR10
Match: AT3G06390.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 149.4 bits (376), Expect = 2.0e-36
Identity = 79/152 (51.97%), Postives = 113/152 (74.34%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LLF+A +++++V+VTS QT + +L GV    PV A+F+ SPAFIYFV AL VA+ Y L++
Sbjct: 44  LLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALIS 103

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            L S+S++ KP  + +F ++ A  D ++LG++ASATG AGGVAYI LKGN  V W+K+C 
Sbjct: 104 TLVSISLLLKPEFTAQFSIYLASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICN 163

Query: 140 AFDKFCRHIGGALAASLFAS-VVLVLLIWISI 171
            +DKFCR+I  +LA SLFAS ++LVL IW ++
Sbjct: 164 VYDKFCRYIATSLALSLFASLLLLVLSIWSAL 195

[Close]
BLAST of Carg20135 vs. TAIR10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 87.4 bits (215), Expect = 9.6e-18
Identity = 59/164 (35.98%), Postives = 97/164 (59.15%), Query Frame = 0 

Query: 13  VVLNYINLLFAAAVSSVVVIVTSKQT---VVGKLRGVPPGFPVQAKFDHSPAFIYFVAAL 72
           ++L    L F+A +S+ +V+  +K+T   +VGK+   P      AKFDH+PAF++FV A 
Sbjct: 18  ILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVAN 77

Query: 73  SVAALYGLVTALASVSVIAKPNLSTKF-LLHFAVWDTLILGVVASATGAAGGVAYIGLKG 132
           ++ + + L+  + ++ +       T F LL  A+ D L + ++++A  AA  +A +G  G
Sbjct: 78  AMVSFHNLL--MIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNG 137

Query: 133 NSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIIS 173
           N H RWDK+C  F  +C H  GAL A+ FA V+L+L+I  + IS
Sbjct: 138 NKHARWDKICDRFATYCDHGAGALIAA-FAGVILMLIISAASIS 178

[Close]
BLAST of Carg20135 vs. TAIR10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-14
Identity = 54/162 (33.33%), Postives = 88/162 (54.32%), Query Frame = 0 

Query: 8   TPKFPVVLNYINLLFAAAVSSVVVIVTSKQT---VVGKLRGVPPGFPVQAKFDHSPAFIY 67
           T  + ++L      F A +++ +V+  +K+T   VV  +  VP    + AKF H+PAF++
Sbjct: 13  TKSWKLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVF 72

Query: 68  FVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYI 127
           FV A  + + + L+  +  +    K       LL  A+ D L   +V++A  AA  VA +
Sbjct: 73  FVIANVMVSFHNLLMIVVQI-FSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAEL 132

Query: 128 GLKGNSHVRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLI 167
           G  GN H +W+KVC  F  +C H  GA+ A+ FA V+L+LL+
Sbjct: 133 GKNGNKHAKWNKVCDRFTTYCDHGAGAIIAA-FAGVILMLLV 172

[Close]
BLAST of Carg20135 vs. TAIR10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 74.3 bits (181), Expect = 8.4e-14
Identity = 49/158 (31.01%), Postives = 86/158 (54.43%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQ----AKFDHSPAFIYFVAALSVAALY 79
           L     + +  V+  +KQT V  ++ +P   P+     AK  +  AF+Y ++A ++A  Y
Sbjct: 34  LALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISANAIACGY 93

Query: 80  GLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWD 139
             ++ +  + +I+K   S   L+   + D +++ ++ S+TGAAG +  +G  GN HV W 
Sbjct: 94  TAISIV--IVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWK 153

Query: 140 KVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISL 174
           KVC  F KFC     ++A +L ASVV +LL+ +  + L
Sbjct: 154 KVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]
BLAST of Carg20135 vs. Swiss-Prot
Match: sp|B9HMP5|CSPLD_POPTR (CASP-like protein 1D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820933 PE=3 SV=2)

HSP 1 Score: 198.4 bits (503), Expect = 6.9e-50
Identity = 97/160 (60.62%), Postives = 134/160 (83.75%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LLFAA+V++VVV+VT+KQT +  + G+P   P++AKF  SPAF+YF++ALSVA LYG++T
Sbjct: 37  LLFAASVTAVVVMVTAKQTKIVPVPGLPISVPLEAKFSDSPAFLYFISALSVAGLYGILT 96

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            LA++S++ KP  +T+FLLHFA+ D L+LG+VASATGAAGGVAY+GLKGNSHVRW KVC 
Sbjct: 97  TLAAISIVLKPAYATRFLLHFALLDVLMLGIVASATGAAGGVAYVGLKGNSHVRWGKVCN 156

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            +DKFC+H+G ++A +LFASV+LVLL  +S+ S++ +I K
Sbjct: 157 VYDKFCQHVGSSIAVALFASVLLVLLTMLSVFSIYRKIPK 196

[Close]
BLAST of Carg20135 vs. Swiss-Prot
Match: sp|B9RT03|CSPL5_RICCO (CASP-like protein 1D1 OS=Ricinus communis OX=3988 GN=RCOM_0679870 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-49
Identity = 101/160 (63.12%), Postives = 131/160 (81.88%), Query Frame = 0 

Query: 21  LFAAAVSSVVVIVTSKQTVVGKLRGVPP-GFPVQAKFDHSPAFIYFVAALSVAALYGLVT 80
           LFA  ++++VV+ T+KQT +  + GVP    PV+AKF+HSPAFIYFVAALSVA LY ++T
Sbjct: 40  LFATTLTAIVVMSTAKQTELAPVPGVPGLRVPVEAKFNHSPAFIYFVAALSVACLYSIIT 99

Query: 81  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 140
            LAS+ VIAKP  +TKFL ++A+WD L+LG+VA+ATGAAGGVAYIGLKGNSH RW K+C 
Sbjct: 100 TLASLGVIAKPIYATKFLFYYALWDVLMLGIVAAATGAAGGVAYIGLKGNSHTRWTKICN 159

Query: 141 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            +D FC+H+G ALA SL ASVVLVLLI +S+ SL++R+R+
Sbjct: 160 VYDTFCKHVGSALAISLAASVVLVLLIMLSVCSLYSRVRR 199

[Close]
BLAST of Carg20135 vs. Swiss-Prot
Match: sp|A7NW79|CSPL7_VITVI (CASP-like protein 1D1 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01830 PE=2 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 3.4e-49
Identity = 99/160 (61.88%), Postives = 129/160 (80.62%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LL  +AV+SVVV+VTS QT +  + GVP     +AKF +SPAFIYFVAALSV  LY ++T
Sbjct: 49  LLLGSAVASVVVMVTSVQTKLIAVAGVPVLVSNKAKFQNSPAFIYFVAALSVVGLYSIIT 108

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            LAS   I+KP+ STK +LH A+WD L+LG+ ASATG AGGVAY+GLKGNSHV W+KVC 
Sbjct: 109 TLASFIFISKPSCSTKTILHLAIWDVLMLGLAASATGTAGGVAYVGLKGNSHVGWNKVCN 168

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            +DKFCRH+GG++A +LFAS++LVLL+W+S+ +L++RIRK
Sbjct: 169 TYDKFCRHVGGSIAVALFASILLVLLVWLSLFTLYSRIRK 208

[Close]
BLAST of Carg20135 vs. Swiss-Prot
Match: sp|C6SVQ5|CSPL7_SOYBN (CASP-like protein 1D2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 7.9e-46
Identity = 100/171 (58.48%), Postives = 129/171 (75.44%), Query Frame = 0 

Query: 10  KFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAAL 69
           KF V+L +  LLFAA++ +VVVIVT+ QT V +   VP   P  AKF +SPAF+YFVAAL
Sbjct: 28  KFDVILRF--LLFAASLVAVVVIVTANQTEVIR---VPQPVPWPAKFRYSPAFVYFVAAL 87

Query: 70  SVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGN 129
           SV  LY ++T LAS+    KP L TK LL+F +WD LILG++ASATG AGGVAY+GLKGN
Sbjct: 88  SVTGLYSIITTLASLLASNKPALKTKLLLYFILWDALILGIIASATGTAGGVAYLGLKGN 147

Query: 130 SH-VRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            H V W+K+C+ +DKFCRH+G ++A +LF SVV VLLIW+S  S+H+R+ K
Sbjct: 148 RHVVGWNKICHVYDKFCRHVGASIAVALFGSVVTVLLIWLSAYSIHSRVPK 193

[Close]
BLAST of Carg20135 vs. Swiss-Prot
Match: sp|C6SXZ3|CSPL8_SOYBN (CASP-like protein 1D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-44
Identity = 97/171 (56.73%), Postives = 127/171 (74.27%), Query Frame = 0 

Query: 10  KFPVVLNYINLLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAAL 69
           KF V+L ++  LFAA++ +VVVIVT  QT V     VP   P  AKF ++PAF+YFVAAL
Sbjct: 28  KFDVILRFV--LFAASLVAVVVIVTGNQTEVIL---VPQPVPWPAKFRYTPAFVYFVAAL 87

Query: 70  SVAALYGLVTALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGN 129
           SV  LY ++T LAS+    KP L TK L +F +WD LILG++ASATG AGGVAY+GLKGN
Sbjct: 88  SVTGLYSIITTLASLFASNKPALKTKLLPYFILWDALILGIIASATGTAGGVAYLGLKGN 147

Query: 130 SH-VRWDKVCYAFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
           SH V W+K+C+ +DKFCRH+G ++A +LF S+V VLLIW+S  S+H+R+ K
Sbjct: 148 SHVVGWNKICHVYDKFCRHVGASIAVALFGSIVTVLLIWLSAYSIHSRVPK 193

[Close]
BLAST of Carg20135 vs. TrEMBL
Match: tr|A0A0A0L552|A0A0A0L552_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151480 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 3.2e-60
Identity = 122/144 (84.72%), Postives = 131/144 (90.97%), Query Frame = 0 

Query: 36  KQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVTALASVSVIAKPNLSTK 95
           KQTVV KLRGVPPGFPV+AKFD SPAF YFVAALSVAA Y LVT L+S+ VIAKPN  TK
Sbjct: 52  KQTVVNKLRGVPPGFPVEAKFDDSPAFRYFVAALSVAAFYSLVTGLSSLFVIAKPNCHTK 111

Query: 96  FLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAAS 155
            LLH+A+WDT ILGVVASATGAAGGVAYIGLKGN+HVRWDKVCYAFDKFCRH+G +LA S
Sbjct: 112 SLLHYAIWDTFILGVVASATGAAGGVAYIGLKGNTHVRWDKVCYAFDKFCRHVGASLATS 171

Query: 156 LFASVVLVLLIWISIISLHARIRK 180
           LFASVV+VLLIWISIISLHARIRK
Sbjct: 172 LFASVVMVLLIWISIISLHARIRK 195

[Close]
BLAST of Carg20135 vs. TrEMBL
Match: tr|A0A1S3AXZ8|A0A1S3AXZ8_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483798 PE=3 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 4.2e-60
Identity = 123/144 (85.42%), Postives = 130/144 (90.28%), Query Frame = 0 

Query: 36  KQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVTALASVSVIAKPNLSTK 95
           KQTVV KLRGVPPG PVQAKFDHSPAF YFVAALS+ A Y L T LASV VIAKPN STK
Sbjct: 55  KQTVVNKLRGVPPGIPVQAKFDHSPAFSYFVAALSLTASYSLTTGLASVLVIAKPNCSTK 114

Query: 96  FLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAAS 155
            LLH+A++DTLILGVVASATGAAGGVAYIGLKGN HV+WDKVCYAFDKFCRH+GGALA S
Sbjct: 115 CLLHYAIFDTLILGVVASATGAAGGVAYIGLKGNKHVQWDKVCYAFDKFCRHVGGALATS 174

Query: 156 LFASVVLVLLIWISIISLHARIRK 180
           LFASVV+V LIWISIISLHARIRK
Sbjct: 175 LFASVVMVFLIWISIISLHARIRK 198

[Close]
BLAST of Carg20135 vs. TrEMBL
Match: tr|A0A2P5FX55|A0A2P5FX55_9ROSA (CASP-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_021620 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.1e-51
Identity = 109/160 (68.12%), Postives = 131/160 (81.88%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LLFA+ ++++VV+VTSKQTV G+   VP   P+ AKFDHSPAFIYF+ ALSVA LY ++T
Sbjct: 44  LLFASTLTAIVVLVTSKQTVRGR---VP--IPLVAKFDHSPAFIYFLVALSVAGLYSIIT 103

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            LAS+SVI KP  STKFLLHFA WD LILG+VASATG AGGVAYIGLKGN HV+W KVC 
Sbjct: 104 TLASISVILKPEFSTKFLLHFAFWDVLILGLVASATGTAGGVAYIGLKGNDHVKWPKVCS 163

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            FDKFCRH+ G+LA SLFASV+LVLL+W S+ S+H ++ K
Sbjct: 164 TFDKFCRHLAGSLAVSLFASVLLVLLVWFSVFSIHKKLPK 198

[Close]
BLAST of Carg20135 vs. TrEMBL
Match: tr|A0A2P5E402|A0A2P5E402_PARAD (CASP-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_007160 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.1e-51
Identity = 109/160 (68.12%), Postives = 131/160 (81.88%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           LLFA+ ++++VV+VTSKQTV G+   VP   P+ AKFDHSPAFIYF+ ALSVA LY ++T
Sbjct: 44  LLFASTLTAIVVLVTSKQTVRGR---VP--IPLVAKFDHSPAFIYFLVALSVAGLYSIIT 103

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            LAS+SVI KP  STKFLLHFA WD LILG+VASATG AGGVAYIGLKGN HV+W KVC 
Sbjct: 104 TLASISVILKPEFSTKFLLHFAFWDVLILGLVASATGTAGGVAYIGLKGNEHVQWQKVCS 163

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            FDKFCRH+ G+LA SLFASV+LVLL+W S+ S+H ++ K
Sbjct: 164 TFDKFCRHLAGSLAVSLFASVLLVLLVWFSVFSIHKKLPK 198

[Close]
BLAST of Carg20135 vs. TrEMBL
Match: tr|A0A2P6QY10|A0A2P6QY10_ROSCH (CASP-like protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0421171 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.4e-49
Identity = 108/160 (67.50%), Postives = 131/160 (81.88%), Query Frame = 0 

Query: 20  LLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVT 79
           L+FAA+++SV+V+VTSKQTV    RG     P++AKFDHSPA IYFV ALSVA LYG++T
Sbjct: 48  LVFAASLTSVLVMVTSKQTV---FRG---PIPLKAKFDHSPALIYFVVALSVAGLYGILT 107

Query: 80  ALASVSVIAKPNLSTKFLLHFAVWDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCY 139
            LAS+SVI KP  STKFLLHFA WD LILG+VASATG AGGVAYIG KGN H++W+KVC 
Sbjct: 108 TLASLSVIWKPIFSTKFLLHFAFWDVLILGLVASATGTAGGVAYIGYKGNEHLQWNKVCS 167

Query: 140 AFDKFCRHIGGALAASLFASVVLVLLIWISIISLHARIRK 180
            FDK+C+H+ G+LA SLFASV+LVLL+W+S  SLH +I K
Sbjct: 168 IFDKYCKHLAGSLATSLFASVLLVLLVWLSTFSLHKKIPK 201

The following BLAST results are available for this feature:
BLAST of Carg20135 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022955971.12.0e-7798.75CASP-like protein 1D1 [Cucurbita moschata][more]
XP_022979933.12.6e-7798.75CASP-like protein 1D1 [Cucurbita maxima][more]
XP_023528553.11.8e-7598.13CASP-like protein 1D1 [Cucurbita pepo subsp. pepo][more]
XP_022138099.14.5e-6685.63CASP-like protein 1D1 [Momordica charantia][more]
XP_011651032.14.9e-6084.72PREDICTED: CASP-like protein 1D1 [Cucumis sativus] >KGN57070.1 hypothetical prot... [more]
BLAST of Carg20135 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15610.12.8e-4156.02Uncharacterised protein family (UPF0497)[more]
AT3G06390.12.0e-3651.97Uncharacterised protein family (UPF0497)[more]
AT5G44550.19.6e-1835.98Uncharacterised protein family (UPF0497)[more]
AT4G20390.12.2e-1433.33Uncharacterised protein family (UPF0497)[more]
AT4G15630.18.4e-1431.01Uncharacterised protein family (UPF0497)[more]
BLAST of Carg20135 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|B9HMP5|CSPLD_POPTR6.9e-5060.63CASP-like protein 1D1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820933 PE=3 S... [more]
sp|B9RT03|CSPL5_RICCO1.2e-4963.13CASP-like protein 1D1 OS=Ricinus communis OX=3988 GN=RCOM_0679870 PE=2 SV=1[more]
sp|A7NW79|CSPL7_VITVI3.4e-4961.88CASP-like protein 1D1 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01830 PE=2 SV=2[more]
sp|C6SVQ5|CSPL7_SOYBN7.9e-4658.48CASP-like protein 1D2 OS=Glycine max OX=3847 PE=2 SV=1[more]
sp|C6SXZ3|CSPL8_SOYBN2.6e-4456.73CASP-like protein 1D1 OS=Glycine max OX=3847 PE=2 SV=1[more]
BLAST of Carg20135 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L552|A0A0A0L552_CUCSA3.2e-6084.72CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151480 PE=3 SV=1[more]
tr|A0A1S3AXZ8|A0A1S3AXZ8_CUCME4.2e-6085.42CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483798 PE=3 SV=1[more]
tr|A0A2P5FX55|A0A2P5FX55_9ROSA2.1e-5168.13CASP-like protein OS=Trema orientalis OX=63057 GN=TorRG33x02_021620 PE=3 SV=1[more]
tr|A0A2P5E402|A0A2P5E402_PARAD2.1e-5168.13CASP-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_007160 PE=3 SV=... [more]
tr|A0A2P6QY10|A0A2P6QY10_ROSCH4.4e-4967.50CASP-like protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0421171 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006459CASP/CASPL
IPR006702CASP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20135-RACarg20135-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 21..161
e-value: 6.8E-33
score: 113.5
IPR006459Casparian strip membrane proteinTIGRFAMTIGR01569TIGR01569coord: 20..172
e-value: 2.4E-41
score: 139.1
NoneNo IPR availablePANTHERPTHR11615:SF150CASP-LIKE PROTEIN 1E1-RELATEDcoord: 20..177
NoneNo IPR availablePANTHERPTHR11615NITRATE, FROMATE, IRON DEHYDROGENASEcoord: 20..177

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg20135Cla021706Watermelon (97103) v1carwmB0834
Carg20135Csa3G151480Cucumber (Chinese Long) v2carcuB0854
Carg20135MELO3C006608Melon (DHL92) v3.5.1carmeB0828
Carg20135ClCG05G005810Watermelon (Charleston Gray)carwcgB0807
Carg20135CSPI03G13940Wild cucumber (PI 183967)carcpiB0874
Carg20135Cucsa.253550Cucumber (Gy14) v1carcgyB0960
Carg20135CmaCh14G016430Cucurbita maxima (Rimu)carcmaB1153
Carg20135CmoCh14G016850Cucurbita moschata (Rifu)carcmoB1123
Carg20135Lsi05G015040Bottle gourd (USVL1VR-Ls)carlsiB761
Carg20135Cp4.1LG03g11310Cucurbita pepo (Zucchini)carcpeB1164
Carg20135CsGy3G014060Cucumber (Gy14) v2carcgybB0828
Carg20135MELO3C006608.2Melon (DHL92) v3.6.1carmedB0840
Carg20135CsaV3_3G014160Cucumber (Chinese Long) v3carcucB0878
Carg20135Cla97C05G087250Watermelon (97103) v2carwmbB0867
Carg20135Bhi01G000678Wax gourdcarwgoB0972
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg20135Silver-seed gourdcarcarB087
Carg20135Silver-seed gourdcarcarB544
Carg20135Cucurbita maxima (Rimu)carcmaB1154
Carg20135Cucurbita maxima (Rimu)carcmaB1155
Carg20135Cucurbita maxima (Rimu)carcmaB1156
Carg20135Cucurbita moschata (Rifu)carcmoB1124
Carg20135Cucurbita moschata (Rifu)carcmoB1125
Carg20135Cucurbita moschata (Rifu)carcmoB1126
Carg20135Cucurbita pepo (Zucchini)carcpeB1163
Carg20135Cucurbita pepo (Zucchini)carcpeB1165
Carg20135Bottle gourd (USVL1VR-Ls)carlsiB760
Carg20135Melon (DHL92) v3.5.1carmeB0827
Carg20135Melon (DHL92) v3.6.1carmedB0839
Carg20135Watermelon (Charleston Gray)carwcgB0808
Carg20135Watermelon (97103) v1carwmB0835
Carg20135Watermelon (97103) v2carwmbB0868