Cp4.1LG03g11310 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTTACTTTTTTCAAACTAATTCCATTCCTTTTTCCCATAATGGCCTCAGCCGTGCCGGAATCTGCCAAGGAGGCACCGCTGCCTCCGCCCTCTACCGCTCCCCGTGGGGGAGTGAATTTGTCCCTGGTCGACTTCGGGCTGAGATTTGTGCTTTTTGCGGCGGCGGTGTCCAGTGTGGTGGTCATCGTCACCAGTAAACAGACCGTCGTCGGTAAGCTCCGGGGAGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATGTGAGTTTTTTTTTTTTTTTTTTCCTATTTAAATAGAAATTTAAATATTTGAAATTATATAAACCTAATATGATATTTATCAACGACTAAAATAAATAAATATATATATATATATTTAAAGTAATTTATTTCAACCTATTAATTTTGAACTCGAAAATAAAAACTCCAAATAAATTAGAAAATAAATAAATAAATATATATATATATATATTGAGAAAAATAATTTTAAAATAAAAAAACGAACATATAATCACTTAGAATAATATCGGGATAATTGATTGTTTGTATGAAAGCTAAATATTATAATATTATATGTCATTTGGACGTCTAATAACATAAATAAAGACCCTCGAGAAGTTGTATGGTGACGAAAATAATTAGACCCTCGAGAAGTTGTATGGTGACGAAAATAATTAGACCTATTTGTAATCCAACTCGATGAACCACATATTATAATCACAAAATTAAAAAAAAAATATTAATAACAAAGTTAAGAACAAAATATTATTTAATCAATTTAAGTTGAATTTTGTTGTATTTTAATTTATGTACTTTCAAATAAACTTTAAAATTAATTTATGATTCATTAAAAATATTATTTTTATTATTATTTATTTCATTTTGTTACAAAATTAACTTAAATAACTAAATATAAGGTTTTTTTTTAATGTTCAACCAATATTATTTATAATTATTCAGGTTGATATTCATTTATTTATTTATTTTTGTCATTTTTAGTTAATTTATTTAATTAAATTGTTTTAAATGCATTTAAAAACTGAAATTAATGGTACGGAAATAAAATATACAGATATTTCGTGGCTGCATTATCGGTGGCGGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGCGATACGGTAATTTCTCTCTCTACTACTCACCGTTAACTAACGGTGGTAATTTAAATATAGATGTAATTTAATTTTAAAACTAATATATTATCACTTTAATGTATAAATTTATTTGGAAATTGTGTGCAGTTGATATTGGGGGTGGTAGCCTCGGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTGTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACCCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGTTGTTATTTTTATTTTTTATAAAAT CAATACACCCAAGTTTCCTGTCGTTCTTAATTACATTAATTTTACTTTTTTCAAACTAATTCCATTCCTTTTTCCCATAATGGCCTCAGCCGTGCCGGAATCTGCCAAGGAGGCACCGCTGCCTCCGCCCTCTACCGCTCCCCGTGGGGGAGTGAATTTGTCCCTGGTCGACTTCGGGCTGAGATTTGTGCTTTTTGCGGCGGCGGTGTCCAGTGTGGTGGTCATCGTCACCAGTAAACAGACCGTCGTCGGTAAGCTCCGGGGAGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGGTGGCGGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGCGATACGTTGATATTGGGGGTGGTAGCCTCGGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTGTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAGAATTCACCCACCTCTTCTCAGGCCTTTGTTACCGCGCGTGTTTGTTACTGCTTCAGGATTTTACTCGTAAATGTGTTTGCTTTGTGGCGTTGAATTTGAAGTAGGATTTTTATATTATTGTGTTGTATATTAGATTGTTGTGGATTCGAATTTGGTTGTTATTTTTATTTTTTATAAAAT ATGGCCTCAGCCGTGCCGGAATCTGCCAAGGAGGCACCGCTGCCTCCGCCCTCTACCGCTCCCCGTGGGGGAGTGAATTTGTCCCTGGTCGACTTCGGGCTGAGATTTGTGCTTTTTGCGGCGGCGGTGTCCAGTGTGGTGGTCATCGTCACCAGTAAACAGACCGTCGTCGGTAAGCTCCGGGGAGTCCCTCCGGGCTTCCCTGTCCAGGCCAAGTTTGACCACTCCCCTGCCTTCATATATTTCGTGGCTGCATTATCGGTGGCGGCACTTTACGGTCTCGTTACGGCCCTCGCCTCCGTTTCCGTCATCGCTAAACCCAATCTCTCTACCAAGTTCTTGCTTCATTTTGCCGTCTGCGATACGTTGATATTGGGGGTGGTAGCCTCGGCCACAGGGGCTGCAGGTGGAGTCGCATACATAGGATTAAAAGGAAACTCGCACGTACGATGGGACAAAGTGTGCTACGCATTCGACAAATTCTGCCGCCACATCGGCGGCGCTTTGGCGGCGTCACTTGTCGCCTCCGTCGTGCTGGTGTTGCTAATTTGGATCTCCATTATATCTCTCCACGCGCGAATTCGAAAGTAG MASAVPESAKEAPLPPPSTAPRGGVNLSLVDFGLRFVLFAAAVSSVVVIVTSKQTVVGKLRGVPPGFPVQAKFDHSPAFIYFVAALSVAALYGLVTALASVSVIAKPNLSTKFLLHFAVCDTLILGVVASATGAAGGVAYIGLKGNSHVRWDKVCYAFDKFCRHIGGALAASLVASVVLVLLIWISIISLHARIRK
BLAST of Cp4.1LG03g11310 vs. Swiss-Prot
Match: CSPL5_RICCO (CASP-like protein 1D1 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 6.1e-52 Identity = 114/193 (59.07%), Postives = 146/193 (75.65%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. Swiss-Prot
Match: CSPLD_POPTR (CASP-like protein 1D1 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=2) HSP 1 Score: 204.5 bits (519), Expect = 1.0e-51 Identity = 104/180 (57.78%), Postives = 143/180 (79.44%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. Swiss-Prot
Match: CSPL7_VITVI (CASP-like protein 1D1 OS=Vitis vinifera GN=VIT_05s0020g01830 PE=2 SV=2) HSP 1 Score: 199.1 bits (505), Expect = 4.4e-50 Identity = 105/184 (57.07%), Postives = 137/184 (74.46%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. Swiss-Prot
Match: CSPL7_SOYBN (CASP-like protein 1D2 OS=Glycine max PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 7.2e-45 Identity = 101/180 (56.11%), Postives = 130/180 (72.22%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. Swiss-Prot
Match: CSPL8_SOYBN (CASP-like protein 1D1 OS=Glycine max PE=2 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 6.1e-44 Identity = 100/180 (55.56%), Postives = 128/180 (71.11%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TrEMBL
Match: A0A0A0L552_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_3G151480 PE=3 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 1.9e-76 Identity = 161/196 (82.14%), Postives = 173/196 (88.27%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TrEMBL
Match: W9S0X6_9ROSA (CASP-like protein OS=Morus notabilis GN=L484_008467 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.1e-51 Identity = 113/190 (59.47%), Postives = 141/190 (74.21%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TrEMBL
Match: A0A067L687_JATCU (CASP-like protein OS=Jatropha curcas GN=JCGZ_02018 PE=3 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 8.9e-50 Identity = 108/191 (56.54%), Postives = 142/191 (74.35%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TrEMBL
Match: M5XMA7_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa011684mg PE=3 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.9e-48 Identity = 119/197 (60.41%), Postives = 142/197 (72.08%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TrEMBL
Match: I3SHN8_LOTJA (CASP-like protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.0e-45 Identity = 102/178 (57.30%), Postives = 130/178 (73.03%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TAIR10
Match: AT4G15610.1 (AT4G15610.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 172.9 bits (437), Expect = 1.9e-43 Identity = 99/181 (54.70%), Postives = 128/181 (70.72%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TAIR10
Match: AT3G06390.1 (AT3G06390.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 156.0 bits (393), Expect = 2.4e-38 Identity = 86/187 (45.99%), Postives = 128/187 (68.45%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TAIR10
Match: AT5G44550.1 (AT5G44550.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 59/161 (36.65%), Postives = 96/161 (59.63%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TAIR10
Match: AT2G36100.1 (AT2G36100.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-15 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. TAIR10
Match: AT4G15630.1 (AT4G15630.1 Uncharacterised protein family (UPF0497)) HSP 1 Score: 78.2 bits (191), Expect = 6.4e-15 Identity = 55/173 (31.79%), Postives = 94/173 (54.34%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. NCBI nr
Match: gi|659076669|ref|XP_008438804.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Cucumis melo]) HSP 1 Score: 298.5 bits (763), Expect = 8.5e-78 Identity = 164/198 (82.83%), Postives = 173/198 (87.37%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. NCBI nr
Match: gi|778678765|ref|XP_011651032.1| (PREDICTED: CASP-like protein 1D1 [Cucumis sativus]) HSP 1 Score: 293.5 bits (750), Expect = 2.7e-76 Identity = 161/196 (82.14%), Postives = 173/196 (88.27%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. NCBI nr
Match: gi|703132022|ref|XP_010105026.1| (hypothetical protein L484_008467 [Morus notabilis]) HSP 1 Score: 210.3 bits (534), Expect = 3.0e-51 Identity = 113/190 (59.47%), Postives = 141/190 (74.21%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. NCBI nr
Match: gi|694322148|ref|XP_009352214.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Pyrus x bretschneideri]) HSP 1 Score: 208.8 bits (530), Expect = 8.8e-51 Identity = 119/191 (62.30%), Postives = 143/191 (74.87%), Query Frame = 1
BLAST of Cp4.1LG03g11310 vs. NCBI nr
Match: gi|657996725|ref|XP_008390731.1| (PREDICTED: CASP-like protein VIT_05s0020g01830 [Malus domestica]) HSP 1 Score: 206.5 bits (524), Expect = 4.4e-50 Identity = 118/191 (61.78%), Postives = 142/191 (74.35%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |