Lsi05G008830 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G008830
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Glutaredoxin family protein
Location	chr05 : 15303561 .. 15303878 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAGTGAATAGATTAGCAGCTGAAAATGAAGTGCTGATAATAAGCAAGAGTTCTTGCTGCCTTTGTTATGCAGTGAGTGTTCTTCTAAGGGATCTTGGAGTTAGTCCCATGGTGCATGAGCTGGACCAAGACCCTGAAGGAAGAGACATGGAGAAGGCTCTTGTAAGGCTCCAAGGATGCAACACGCCGCCCGTTCCTGCCGTCTTCATCGCCGGAGAACTCGTCGGGTCTACCAATGAAGTCATGTCTCTTCACCTTAGTGGAGATCTCAATCGAATGTTGAAACCCTACAAGGTGGTTCAAGAAAACTAG

mRNA sequence

ATGGAAAAAGTGAATAGATTAGCAGCTGAAAATGAAGTGCTGATAATAAGCAAGAGTTCTTGCTGCCTTTGTTATGCAGTGAGTGTTCTTCTAAGGGATCTTGGAGTTAGTCCCATGGTGCATGAGCTGGACCAAGACCCTGAAGGAAGAGACATGGAGAAGGCTCTTGTAAGGCTCCAAGGATGCAACACGCCGCCCGTTCCTGCCGTCTTCATCGCCGGAGAACTCGTCGGGTCTACCAATGAAGTCATGTCTCTTCACCTTAGTGGAGATCTCAATCGAATGTTGAAACCCTACAAGGTGGTTCAAGAAAACTAG

Coding sequence (CDS)

ATGGAAAAAGTGAATAGATTAGCAGCTGAAAATGAAGTGCTGATAATAAGCAAGAGTTCTTGCTGCCTTTGTTATGCAGTGAGTGTTCTTCTAAGGGATCTTGGAGTTAGTCCCATGGTGCATGAGCTGGACCAAGACCCTGAAGGAAGAGACATGGAGAAGGCTCTTGTAAGGCTCCAAGGATGCAACACGCCGCCCGTTCCTGCCGTCTTCATCGCCGGAGAACTCGTCGGGTCTACCAATGAAGTCATGTCTCTTCACCTTAGTGGAGATCTCAATCGAATGTTGAAACCCTACAAGGTGGTTCAAGAAAACTAG

Protein sequence

MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQGCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVVQEN

Homology

[Close]

BLAST of Lsi05G008830 vs. Swiss-Prot
Match: GRC13_ARATH (Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-29
Identity = 63/102 (61.76%), Postives = 83/102 (81.37%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P +HE+D DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVV 103
           GC+T  VPAVF+ G+LVGSTNEVMSLHLSG L  ++KPY+ +
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]

BLAST of Lsi05G008830 vs. Swiss-Prot
Match: GRXS9_ARATH (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.7e-29
Identity = 63/100 (63.00%), Postives = 84/100 (84.00%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I SKSSCC+ YAV VL +DLGV P VHE+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYK 101
           GC+T PVPA+F+ G+L+GSTNEVMSLHLSG L  ++KP++
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQ 98

[Close]

BLAST of Lsi05G008830 vs. Swiss-Prot
Match: GRS11_ARATH (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 63/99 (63.64%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCL YAV VL +DLGV+P +HE+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPY 100
           GC + PVPAVFI G+LVGSTNEVMS+HLS  L  ++KPY
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]

BLAST of Lsi05G008830 vs. Swiss-Prot
Match: GRC14_ARATH (Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-28
Identity = 62/100 (62.00%), Postives = 81/100 (81.00%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P +HE+D DP+ R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYK 101
           GC    VPAVF++G+LVGSTN+VMSLHLSG L  ++KPY+
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQ 98

[Close]

BLAST of Lsi05G008830 vs. Swiss-Prot
Match: GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 9.0e-26
Identity = 59/97 (60.82%), Postives = 77/97 (79.38%), Query Frame = 1


Query: 1  MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
          M++VNRLAA+  V+I S SSCC+C+ V+ L  +LGV+P V ELD+DP G++MEKAL RL 
Sbjct: 1  MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 61 GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLK 98
          G  +P VPAVFI G LVGST++VMSLHLSG+L  +L+
Sbjct: 61 G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLR 96

[Close]

BLAST of Lsi05G008830 vs. TrEMBL
Match: A0A0A0K5I6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230940 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 2.8e-50
Identity = 101/105 (96.19%), Postives = 104/105 (99.05%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMV+ELDQDPEGRDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVVQEN 106
           GCNTPPVPAVFIAG+LVGSTNE+MSLHLSGDLNRMLKPYK VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of Lsi05G008830 vs. TrEMBL
Match: A0A166HE67_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002796 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-33
Identity = 71/102 (69.61%), Postives = 88/102 (86.27%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           MEK++R+A+EN V+I SKS+CC+CYAV +L R+L V P+VHE+D+DPEGR+MEKAL+RL 
Sbjct: 1   MEKISRMASENGVVIFSKSTCCMCYAVDILFRELLVRPVVHEIDKDPEGREMEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVV 103
           GCN P VPAVFI G+LVGSTNEVMSLHLSG L  +LKPY+ V
Sbjct: 61  GCNAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLLKPYQAV 101

[Close]

BLAST of Lsi05G008830 vs. TrEMBL
Match: A0A061DY56_THECC (Glutaredoxin OS=Theobroma cacao GN=TCM_004551 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.3e-33
Identity = 74/101 (73.27%), Postives = 87/101 (86.14%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV RLA+E  V++ SKSSCCLCYAV +L ++LGVSP+VHE+DQDPEGRDMEKAL RL 
Sbjct: 1   MDKVMRLASEKGVVLFSKSSCCLCYAVKILFQELGVSPVVHEIDQDPEGRDMEKALTRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKV 102
           GCN  PVPAVFI G+LVGSTNEVMSLHLSG L  +LKPY++
Sbjct: 61  GCNA-PVPAVFIGGKLVGSTNEVMSLHLSGGLIPLLKPYQL 99

[Close]

BLAST of Lsi05G008830 vs. TrEMBL
Match: A0A0B2R3K6_GLYSO (Glutaredoxin-C13 OS=Glycine soja GN=glysoja_038852 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-32
Identity = 70/102 (68.63%), Postives = 89/102 (87.25%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV RLA+E  V+I +KSSCCLCYAV++L ++LGV+P+VHE+D DPEGR+MEKAL+R Q
Sbjct: 1   MDKVTRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPVVHEIDHDPEGREMEKALLR-Q 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVV 103
           GC T PVPAVFI G+L+GSTNE+MSLHLSG L +MLKPY+ +
Sbjct: 61  GC-TAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQMLKPYQAL 100

[Close]

BLAST of Lsi05G008830 vs. TrEMBL
Match: C6SXG8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G210100 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-32
Identity = 70/102 (68.63%), Postives = 89/102 (87.25%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV RLA+E  V+I +KSSCCLCYAV++L ++LGV+P+VHE+D DPEGR+MEKAL+R Q
Sbjct: 1   MDKVTRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPVVHEIDHDPEGREMEKALLR-Q 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVV 103
           GC T PVPAVFI G+L+GSTNE+MSLHLSG L +MLKPY+ +
Sbjct: 61  GC-TAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQMLKPYQAL 100

[Close]

BLAST of Lsi05G008830 vs. TAIR10
Match: AT2G47880.1 (AT2G47880.1 Glutaredoxin family protein)

HSP 1 Score: 130.2 bits (326), Expect = 7.5e-31
Identity = 63/102 (61.76%), Postives = 83/102 (81.37%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P +HE+D DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVV 103
           GC+T  VPAVF+ G+LVGSTNEVMSLHLSG L  ++KPY+ +
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]

BLAST of Lsi05G008830 vs. TAIR10
Match: AT2G30540.1 (AT2G30540.1 Thioredoxin superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 9.9e-31
Identity = 63/100 (63.00%), Postives = 84/100 (84.00%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I SKSSCC+ YAV VL +DLGV P VHE+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYK 101
           GC+T PVPA+F+ G+L+GSTNEVMSLHLSG L  ++KP++
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQ 98

[Close]

BLAST of Lsi05G008830 vs. TAIR10
Match: AT1G06830.1 (AT1G06830.1 Glutaredoxin family protein)

HSP 1 Score: 126.7 bits (317), Expect = 8.3e-30
Identity = 63/99 (63.64%), Postives = 82/99 (82.83%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCL YAV VL +DLGV+P +HE+D+DPE R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPY 100
           GC + PVPAVFI G+LVGSTNEVMS+HLS  L  ++KPY
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]

BLAST of Lsi05G008830 vs. TAIR10
Match: AT3G62960.1 (AT3G62960.1 Thioredoxin superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 8.3e-30
Identity = 62/100 (62.00%), Postives = 81/100 (81.00%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV R+++E  V+I +KSSCCLCYAV +L RDL V P +HE+D DP+ R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYK 101
           GC    VPAVF++G+LVGSTN+VMSLHLSG L  ++KPY+
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQ 98

[Close]

BLAST of Lsi05G008830 vs. TAIR10
Match: AT2G47870.1 (AT2G47870.1 Thioredoxin superfamily protein)

HSP 1 Score: 110.9 bits (276), Expect = 4.7e-25
Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 1


Query: 1  MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
          ME+V  LA+E   +I +KSSCC+C+++  L  +LG SP +HELD+DP+G DME+AL R+ 
Sbjct: 1  MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61 GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLK 98
          G N P VPAVF+ G  VGS  +V+S H+ G L +MLK
Sbjct: 61 GSN-PAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLK 96

[Close]

BLAST of Lsi05G008830 vs. NCBI nr
Match: gi|449444230|ref|XP_004139878.1| (PREDICTED: glutaredoxin-C13-like [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 4.0e-50
Identity = 101/105 (96.19%), Postives = 104/105 (99.05%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMV+ELDQDPEGRDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVVQEN 106
           GCNTPPVPAVFIAG+LVGSTNE+MSLHLSGDLNRMLKPYK VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of Lsi05G008830 vs. NCBI nr
Match: gi|1021052362|gb|KZN10140.1| (hypothetical protein DCAR_002796 [Daucus carota subsp. sativus])

HSP 1 Score: 149.8 bits (377), Expect = 2.6e-33
Identity = 71/102 (69.61%), Postives = 88/102 (86.27%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           MEK++R+A+EN V+I SKS+CC+CYAV +L R+L V P+VHE+D+DPEGR+MEKAL+RL 
Sbjct: 1   MEKISRMASENGVVIFSKSTCCMCYAVDILFRELLVRPVVHEIDKDPEGREMEKALLRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKVV 103
           GCN P VPAVFI G+LVGSTNEVMSLHLSG L  +LKPY+ V
Sbjct: 61  GCNAPAVPAVFIGGKLVGSTNEVMSLHLSGSLVTLLKPYQAV 101

[Close]

BLAST of Lsi05G008830 vs. NCBI nr
Match: gi|590718382|ref|XP_007050806.1| (Glutaredoxin [Theobroma cacao])

HSP 1 Score: 148.3 bits (373), Expect = 7.6e-33
Identity = 74/101 (73.27%), Postives = 87/101 (86.14%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           M+KV RLA+E  V++ SKSSCCLCYAV +L ++LGVSP+VHE+DQDPEGRDMEKAL RL 
Sbjct: 1   MDKVMRLASEKGVVLFSKSSCCLCYAVKILFQELGVSPVVHEIDQDPEGRDMEKALTRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYKV 102
           GCN  PVPAVFI G+LVGSTNEVMSLHLSG L  +LKPY++
Sbjct: 61  GCNA-PVPAVFIGGKLVGSTNEVMSLHLSGGLIPLLKPYQL 99

[Close]

BLAST of Lsi05G008830 vs. NCBI nr
Match: gi|502112444|ref|XP_004494333.1| (PREDICTED: monothiol glutaredoxin-S11 [Cicer arietinum])

HSP 1 Score: 148.3 bits (373), Expect = 7.6e-33
Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           MEKV RLA+E  V+I +KSSCCLCYAV++L ++LG+ PMVHE+DQDPEGRDMEKAL+RL 
Sbjct: 1   MEKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGIRPMVHEIDQDPEGRDMEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPY 100
           GC T PVPAVFI G+L+GSTNE+MSLHLSG L ++LKPY
Sbjct: 61  GC-TAPVPAVFIGGKLMGSTNEIMSLHLSGSLTQLLKPY 97

[Close]

BLAST of Lsi05G008830 vs. NCBI nr
Match: gi|1012183911|ref|XP_015968943.1| (PREDICTED: monothiol glutaredoxin-S11-like [Arachis duranensis])

HSP 1 Score: 147.1 bits (370), Expect = 1.7e-32
Identity = 69/100 (69.00%), Postives = 89/100 (89.00%), Query Frame = 1


Query: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVHELDQDPEGRDMEKALVRLQ 60
           MEKV RLA+E  V+I +KSSCCLCYAV++L +++GVSP+VHE+DQDP+GR+MEKAL+RL 
Sbjct: 1   MEKVTRLASEKGVVIFTKSSCCLCYAVNILFQEIGVSPVVHEIDQDPDGREMEKALMRL- 60

Query: 61  GCNTPPVPAVFIAGELVGSTNEVMSLHLSGDLNRMLKPYK 101
           GCN  PVPAVFI G+L+GSTNE+MS+HLSG L ++LKPY+
Sbjct: 61  GCNA-PVPAVFIGGKLMGSTNEIMSMHLSGSLTQLLKPYQ 98

The following BLAST results are available for this feature:

BLAST of Lsi05G008830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GRC13_ARATH	1.3e-29	61.76	Glutaredoxin-C13 OS=Arabidopsis thaliana GN=GRXC13 PE=3 SV=1	[more]
GRXS9_ARATH	1.7e-29	63.00	Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana GN=GRXS9 PE=3 SV=1	[more]
GRS11_ARATH	1.5e-28	63.64	Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana GN=GRXS11 PE=3 SV=1	[more]
GRC14_ARATH	1.5e-28	62.00	Glutaredoxin-C14 OS=Arabidopsis thaliana GN=GRXC14 PE=3 SV=1	[more]
GRXC1_ORYSJ	9.0e-26	60.82	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica GN=GRXC1 PE=3 SV=1	[more]

BLAST of Lsi05G008830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5I6_CUCSA	2.8e-50	96.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230940 PE=4 SV=1	[more]
A0A166HE67_DAUCA	1.8e-33	69.61	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002796 PE=4 SV=1	[more]
A0A061DY56_THECC	5.3e-33	73.27	Glutaredoxin OS=Theobroma cacao GN=TCM_004551 PE=4 SV=1	[more]
A0A0B2R3K6_GLYSO	2.0e-32	68.63	Glutaredoxin-C13 OS=Glycine soja GN=glysoja_038852 PE=4 SV=1	[more]
C6SXG8_SOYBN	2.0e-32	68.63	Uncharacterized protein OS=Glycine max GN=GLYMA_03G210100 PE=2 SV=1	[more]

BLAST of Lsi05G008830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47880.1	7.5e-31	61.76	Glutaredoxin family protein	[more]
AT2G30540.1	9.9e-31	63.00	Thioredoxin superfamily protein	[more]
AT1G06830.1	8.3e-30	63.64	Glutaredoxin family protein	[more]
AT3G62960.1	8.3e-30	62.00	Thioredoxin superfamily protein	[more]
AT2G47870.1	4.7e-25	52.58	Thioredoxin superfamily protein	[more]

BLAST of Lsi05G008830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444230\|ref\|XP_004139878.1\|	4.0e-50	96.19	PREDICTED: glutaredoxin-C13-like [Cucumis sativus]	[more]
gi\|1021052362\|gb\|KZN10140.1\|	2.6e-33	69.61	hypothetical protein DCAR_002796 [Daucus carota subsp. sativus]	[more]
gi\|590718382\|ref\|XP_007050806.1\|	7.6e-33	73.27	Glutaredoxin [Theobroma cacao]	[more]
gi\|502112444\|ref\|XP_004494333.1\|	7.6e-33	72.73	PREDICTED: monothiol glutaredoxin-S11 [Cicer arietinum]	[more]
gi\|1012183911\|ref\|XP_015968943.1\|	1.7e-32	69.00	PREDICTED: monothiol glutaredoxin-S11-like [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012336	Thioredoxin-like_fold
IPR011905	GlrX-like_pln_2
IPR002109	Glutaredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G008830.1	Lsi05G008830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..77 score: 1.
IPR002109	Glutaredoxin	PROFILE	PS51354	GLUTAREDOXIN_2	coord: 1..103 score: 19
IPR011905	Glutaredoxin-like, plant II	TIGRFAMs	TIGR02189	TIGR02189	coord: 4..100 score: 2.6
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 2..101 score: 5.9
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 1..100 score: 1.34
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 1..100 score: 1.3
None	No IPR available	PANTHER	PTHR10168:SF57	GLUTAREDOXIN-C13-RELATED	coord: 1..100 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G008830	CmaCh02G010530	Cucurbita maxima (Rimu)	cmalsiB581
Lsi05G008830	CmaCh19G003640	Cucurbita maxima (Rimu)	cmalsiB489
Lsi05G008830	CmoCh19G003680	Cucurbita moschata (Rifu)	cmolsiB476
Lsi05G008830	CmoCh02G010680	Cucurbita moschata (Rifu)	cmolsiB558
Lsi05G008830	Cla009473	Watermelon (97103) v1	lsiwmB343
Lsi05G008830	Cla97C09G175940	Watermelon (97103) v2	lsiwmbB354
Lsi05G008830	Bhi05G000477	Wax gourd	lsiwgoB461
Lsi05G008830	Cp4.1LG05g06680	Cucurbita pepo (Zucchini)	cpelsiB623
Lsi05G008830	Cp4.1LG15g02910	Cucurbita pepo (Zucchini)	cpelsiB215
Lsi05G008830	Carg08425	Silver-seed gourd	carlsiB651

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G008830	Cucurbita pepo (Zucchini)	cpelsiB216
Lsi05G008830	Wild cucumber (PI 183967)	cpilsiB466
Lsi05G008830	Cucumber (Chinese Long) v2	culsiB459
Lsi05G008830	Watermelon (Charleston Gray)	lsiwcgB316
Lsi05G008830	Cucumber (Gy14) v2	cgyblsiB427
Lsi05G008830	Cucumber (Chinese Long) v3	cuclsiB488