Carg08425 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg08425
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	glutaredoxin-C13-like
Location	Cucurbita_argyrosperma_scaffold_022 : 197299 .. 197616 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAGGGTGAAGAGACTAGCAGCTGAGCATGAGGTGCTGATAATAAGCAAGACTTCATGCTGCCTTTGTTATGCAGTGAATGTGCTTCTAAGGGAGCTTGGAGTTAGCCCCTTGGTGTACGAGCTGGACCAGGACCCTGATGCCCGGGACATGGAGAAGGCTCTTGTAAGGCTACAAGGCTGCCATACGCCCCCCGTCCCCGCCGTCTTCATCGCCGGGGACCTCGTCGGCTCGACCAACGAAGTCATGTCGCTGCACCTCAGCGGAGAGCTGAATCGAATGTTGAAGCCCTTCAAAGTGGTTCAAGAGAACTAG

mRNA sequence

ATGGAAAGGGTGAAGAGACTAGCAGCTGAGCATGAGGTGCTGATAATAAGCAAGACTTCATGCTGCCTTTGTTATGCAGTGAATGTGCTTCTAAGGGAGCTTGGAGTTAGCCCCTTGGTGTACGAGCTGGACCAGGACCCTGATGCCCGGGACATGGAGAAGGCTCTTGTAAGGCTACAAGGCTGCCATACGCCCCCCGTCCCCGCCGTCTTCATCGCCGGGGACCTCGTCGGCTCGACCAACGAAGTCATGTCGCTGCACCTCAGCGGAGAGCTGAATCGAATGTTGAAGCCCTTCAAAGTGGTTCAAGAGAACTAG

Coding sequence (CDS)

ATGGAAAGGGTGAAGAGACTAGCAGCTGAGCATGAGGTGCTGATAATAAGCAAGACTTCATGCTGCCTTTGTTATGCAGTGAATGTGCTTCTAAGGGAGCTTGGAGTTAGCCCCTTGGTGTACGAGCTGGACCAGGACCCTGATGCCCGGGACATGGAGAAGGCTCTTGTAAGGCTACAAGGCTGCCATACGCCCCCCGTCCCCGCCGTCTTCATCGCCGGGGACCTCGTCGGCTCGACCAACGAAGTCATGTCGCTGCACCTCAGCGGAGAGCTGAATCGAATGTTGAAGCCCTTCAAAGTGGTTCAAGAGAACTAG

Protein sequence

MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQGCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN

Homology

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BLAST of Carg08425 vs. NCBI nr
Match: XP_022958442.1 (glutaredoxin-C13-like [Cucurbita moschata] >XP_023533475.1 glutaredoxin-C13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.2 bits (539), Expect = 8.3e-52
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ
Sbjct: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN
Sbjct: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 105

[Close]

BLAST of Carg08425 vs. NCBI nr
Match: XP_022995212.1 (glutaredoxin-C13-like [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 7.0e-51
Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ
Sbjct: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GCHTP VPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN
Sbjct: 61  GCHTPAVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 105

[Close]

BLAST of Carg08425 vs. NCBI nr
Match: XP_004139878.1 (PREDICTED: glutaredoxin-C13-like [Cucumis sativus] >XP_008447177.1 PREDICTED: glutaredoxin-C13-like [Cucumis melo] >KGN44219.1 hypothetical protein Csa_7G230940 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 3.4e-45
Identity = 91/105 (86.67%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GC+TPPVPAVFIAGDLVGSTNE+MSLHLSG+LNRMLKP+K VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of Carg08425 vs. NCBI nr
Match: XP_022159659.1 (monothiol glutaredoxin-S11-like [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 6.4e-44
Identity = 92/106 (86.79%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPD-ARDMEKALVRL 60
           MERVKRLAAE+EVLIISK+SCCL YAVNVLLRELGVSP+VYELDQDP+ AR+MEKALVRL
Sbjct: 1   MERVKRLAAENEVLIISKSSCCLSYAVNVLLRELGVSPMVYELDQDPEVAREMEKALVRL 60

Query: 61  QGCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           QGC+TPPVPAVFI GDL+GSTNEVMSLHLSG+LNRML+P+K+VQEN
Sbjct: 61  QGCNTPPVPAVFIGGDLIGSTNEVMSLHLSGDLNRMLEPYKLVQEN 106

[Close]

BLAST of Carg08425 vs. NCBI nr
Match: XP_023511425.1 (glutaredoxin-C14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 1.9e-43
Identity = 88/105 (83.81%), Postives = 100/105 (95.24%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+VKRLAAE+EVL+ISK+SCCLCYAV VLLR+LGV P+VYELD DP+ARD+EKALVRLQ
Sbjct: 1   MEKVKRLAAENEVLVISKSSCCLCYAVVVLLRDLGVCPMVYELDHDPEARDVEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
            CH PPVPAVFIAG+L+GSTNEVMSLHLSG+LNRMLKP+KVVQEN
Sbjct: 61  VCHAPPVPAVFIAGELIGSTNEVMSLHLSGDLNRMLKPYKVVQEN 105

[Close]

BLAST of Carg08425 vs. TAIR10
Match: AT2G47880.1 (Glutaredoxin family protein)

HSP 1 Score: 123.6 bits (309), Expect = 7.1e-29
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVV 103
           GC T  VPAVF+ G LVGSTNEVMSLHLSG L  ++KP++ +
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]

BLAST of Carg08425 vs. TAIR10
Match: AT2G30540.1 (Thioredoxin superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 9.2e-29
Identity = 59/100 (59.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I SK+SCC+ YAV VL ++LGV P V+E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC T PVPA+F+ G L+GSTNEVMSLHLSG L  ++KPF+
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQ 98

[Close]

BLAST of Carg08425 vs. TAIR10
Match: AT3G62960.1 (Thioredoxin superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 4.6e-28
Identity = 58/100 (58.00%), Postives = 80/100 (80.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC    VPAVF++G LVGSTN+VMSLHLSG L  ++KP++
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQ 98

[Close]

BLAST of Carg08425 vs. TAIR10
Match: AT1G06830.1 (Glutaredoxin family protein)

HSP 1 Score: 117.9 bits (294), Expect = 3.9e-27
Identity = 57/99 (57.58%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCL YAV VL ++LGV+P ++E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPF 100
           GC + PVPAVFI G LVGSTNEVMS+HLS  L  ++KP+
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]

BLAST of Carg08425 vs. TAIR10
Match: AT2G47870.1 (Thioredoxin superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 4.4e-23
Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 0


Query: 1  MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
          MERV+ LA+E   +I +K+SCC+C+++  L  ELG SP ++ELD+DP   DME+AL R+ 
Sbjct: 1  MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDPQGPDMERALFRVF 60

Query: 61 GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLK 98
          G + P VPAVF+ G  VGS  +V+S H+ G L +MLK
Sbjct: 61 GSN-PAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLK 96

[Close]

BLAST of Carg08425 vs. Swiss-Prot
Match: sp|O82255|GRC13_ARATH (Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-27
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALLRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVV 103
           GC T  VPAVF+ G LVGSTNEVMSLHLSG L  ++KP++ +
Sbjct: 61  GCST-AVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100

[Close]

BLAST of Carg08425 vs. Swiss-Prot
Match: sp|O04341|GRXS9_ARATH (Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana OX=3702 GN=GRXS9 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-27
Identity = 59/100 (59.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I SK+SCC+ YAV VL ++LGV P V+E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC T PVPA+F+ G L+GSTNEVMSLHLSG L  ++KPF+
Sbjct: 61  GCST-PVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQ 98

[Close]

BLAST of Carg08425 vs. Swiss-Prot
Match: sp|Q9LYC5|GRC14_ARATH (Glutaredoxin-C14 OS=Arabidopsis thaliana OX=3702 GN=GRXC14 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 8.3e-27
Identity = 58/100 (58.00%), Postives = 80/100 (80.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCLCYAV +L R+L V P ++E+D DPD R++EKALVRL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDPDCREIEKALVRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC    VPAVF++G LVGSTN+VMSLHLSG L  ++KP++
Sbjct: 61  GC-ANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIKPYQ 98

[Close]

BLAST of Carg08425 vs. Swiss-Prot
Match: sp|Q9M9Y9|GRS11_ARATH (Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana OX=3702 GN=GRXS11 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.0e-26
Identity = 57/99 (57.58%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           M++V R+++E  V+I +K+SCCL YAV VL ++LGV+P ++E+D+DP+ R++EKAL+RL 
Sbjct: 1   MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDPECREIEKALMRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPF 100
           GC + PVPAVFI G LVGSTNEVMS+HLS  L  ++KP+
Sbjct: 61  GC-SKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVKPY 97

[Close]

BLAST of Carg08425 vs. Swiss-Prot
Match: sp|Q7G8Y5|GRXC1_ORYSJ (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.9e-24
Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 0


Query: 1  MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
          M+RV RLAA+  V+I S +SCC+C+ V  L  ELGV+P V ELD+DP  ++MEKAL RL 
Sbjct: 1  MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 61 GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLK 98
          G  +P VPAVFI G LVGST++VMSLHLSG L  +L+
Sbjct: 61 G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLR 96

[Close]

BLAST of Carg08425 vs. TrEMBL
Match: tr|A0A1S3BGT8|A0A1S3BGT8_CUCME (glutaredoxin-C13-like OS=Cucumis melo OX=3656 GN=LOC103489689 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-45
Identity = 91/105 (86.67%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GC+TPPVPAVFIAGDLVGSTNE+MSLHLSG+LNRMLKP+K VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of Carg08425 vs. TrEMBL
Match: tr|A0A0A0K5I6|A0A0A0K5I6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230940 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-45
Identity = 91/105 (86.67%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RLAAE+EVLIISK+SCCLCYAV+VLLR+LGVSP+VYELDQDP+ RDMEKALVRLQ
Sbjct: 1   MEKVNRLAAENEVLIISKSSCCLCYAVSVLLRDLGVSPMVYELDQDPEGRDMEKALVRLQ 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFKVVQEN 106
           GC+TPPVPAVFIAGDLVGSTNE+MSLHLSG+LNRMLKP+K VQEN
Sbjct: 61  GCNTPPVPAVFIAGDLVGSTNELMSLHLSGDLNRMLKPYKAVQEN 105

[Close]

BLAST of Carg08425 vs. TrEMBL
Match: tr|A0A0L9TX27|A0A0L9TX27_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g109200 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.0e-31
Identity = 68/100 (68.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RL+AE  V++ +K+SCCLCYAVN+L +ELGV P+V+E+D+DP+A++MEKAL RL 
Sbjct: 1   MEKVIRLSAERGVVVFTKSSCCLCYAVNILFKELGVDPVVHEIDKDPEAKEMEKALTRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC +PPVPAVFI G LVGSTNEVMSLHLSG L +MLKP++
Sbjct: 61  GC-SPPVPAVFIGGTLVGSTNEVMSLHLSGSLTKMLKPYR 98

[Close]

BLAST of Carg08425 vs. TrEMBL
Match: tr|A0A0S3SS66|A0A0S3SS66_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G243600 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.0e-31
Identity = 68/100 (68.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME+V RL+AE  V++ +K+SCCLCYAVN+L +ELGV P+V+E+D+DP+A++MEKAL RL 
Sbjct: 1   MEKVIRLSAERGVVVFTKSSCCLCYAVNILFKELGVDPVVHEIDKDPEAKEMEKALTRL- 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC +PPVPAVFI G LVGSTNEVMSLHLSG L +MLKP++
Sbjct: 61  GC-SPPVPAVFIGGTLVGSTNEVMSLHLSGSLTKMLKPYR 98

[Close]

BLAST of Carg08425 vs. TrEMBL
Match: tr|A0A2J6MAL3|A0A2J6MAL3_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X189620 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.1e-31
Identity = 66/100 (66.00%), Postives = 86/100 (86.00%), Query Frame = 0


Query: 1   MERVKRLAAEHEVLIISKTSCCLCYAVNVLLRELGVSPLVYELDQDPDARDMEKALVRLQ 60
           ME++K L +E+ V+I +K++CCLCYAV +L +ELGVSP+V+E+DQDP  RDMEKAL++ Q
Sbjct: 1   MEKIKSLVSENGVVIFTKSTCCLCYAVKILFQELGVSPVVHEIDQDPHGRDMEKALLK-Q 60

Query: 61  GCHTPPVPAVFIAGDLVGSTNEVMSLHLSGELNRMLKPFK 101
           GC++PPVPAV+I G LVGSTNEVMSLHLSG L  +LKPF+
Sbjct: 61  GCNSPPVPAVYICGKLVGSTNEVMSLHLSGSLIPLLKPFQ 99

The following BLAST results are available for this feature:

BLAST of Carg08425 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958442.1	8.3e-52	100.00	glutaredoxin-C13-like [Cucurbita moschata] >XP_023533475.1 glutaredoxin-C13-like...	[more]
XP_022995212.1	7.0e-51	99.05	glutaredoxin-C13-like [Cucurbita maxima]	[more]
XP_004139878.1	3.4e-45	86.67	PREDICTED: glutaredoxin-C13-like [Cucumis sativus] >XP_008447177.1 PREDICTED: gl...	[more]
XP_022159659.1	6.4e-44	86.79	monothiol glutaredoxin-S11-like [Momordica charantia]	[more]
XP_023511425.1	1.9e-43	83.81	glutaredoxin-C14-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg08425 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G47880.1	7.1e-29	57.84	Glutaredoxin family protein	[more]
AT2G30540.1	9.2e-29	59.00	Thioredoxin superfamily protein	[more]
AT3G62960.1	4.6e-28	58.00	Thioredoxin superfamily protein	[more]
AT1G06830.1	3.9e-27	57.58	Glutaredoxin family protein	[more]
AT2G47870.1	4.4e-23	50.52	Thioredoxin superfamily protein	[more]

BLAST of Carg08425 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82255\|GRC13_ARATH	1.3e-27	57.84	Glutaredoxin-C13 OS=Arabidopsis thaliana OX=3702 GN=GRXC13 PE=3 SV=1	[more]
sp\|O04341\|GRXS9_ARATH	1.7e-27	59.00	Monothiol glutaredoxin-S9 OS=Arabidopsis thaliana OX=3702 GN=GRXS9 PE=3 SV=1	[more]
sp\|Q9LYC5\|GRC14_ARATH	8.3e-27	58.00	Glutaredoxin-C14 OS=Arabidopsis thaliana OX=3702 GN=GRXC14 PE=3 SV=1	[more]
sp\|Q9M9Y9\|GRS11_ARATH	7.0e-26	57.58	Monothiol glutaredoxin-S11 OS=Arabidopsis thaliana OX=3702 GN=GRXS11 PE=3 SV=1	[more]
sp\|Q7G8Y5\|GRXC1_ORYSJ	2.9e-24	59.79	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of Carg08425 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BGT8\|A0A1S3BGT8_CUCME	2.2e-45	86.67	glutaredoxin-C13-like OS=Cucumis melo OX=3656 GN=LOC103489689 PE=4 SV=1	[more]
tr\|A0A0A0K5I6\|A0A0A0K5I6_CUCSA	2.2e-45	86.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G230940 PE=4 SV=1	[more]
tr\|A0A0L9TX27\|A0A0L9TX27_PHAAN	7.0e-31	68.00	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan02g109200 PE...	[more]
tr\|A0A0S3SS66\|A0A0S3SS66_PHAAN	7.0e-31	68.00	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G...	[more]
tr\|A0A2J6MAL3\|A0A2J6MAL3_LACSA	9.1e-31	66.00	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X189620 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity
GO:0015035	protein disulfide oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR002109	Glutaredoxin
IPR011905	GlrX-like_pln_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg08425-RA	Carg08425-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 4..100 e-value: 1.3E-34 score: 116.1
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 1..105 e-value: 7.4E-25 score: 88.8
None	No IPR available	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 2..101
None	No IPR available	PANTHER	PTHR10168:SF57	GLUTAREDOXIN-C13-RELATED	coord: 2..101
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 13..92 e-value: 1.06634E-27 score: 97.2251
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 13..77 e-value: 8.1E-10 score: 38.7
IPR002109	Glutaredoxin	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 1..103 score: 19.52
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 1..99

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg08425	Cla009473	Watermelon (97103) v1	carwmB0706
Carg08425	CmaCh02G010530	Cucurbita maxima (Rimu)	carcmaB0999
Carg08425	CmoCh02G010680	Cucurbita moschata (Rifu)	carcmoB0971
Carg08425	Lsi05G008830	Bottle gourd (USVL1VR-Ls)	carlsiB651
Carg08425	Cp4.1LG05g06680	Cucurbita pepo (Zucchini)	carcpeB1002
Carg08425	Cla97C09G175940	Watermelon (97103) v2	carwmbB0745
Carg08425	Bhi05G000477	Wax gourd	carwgoB0838

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg08425	Watermelon (97103) v2	carwmbB0743
Carg08425	Wax gourd	carwgoB0831
Carg08425	Wax gourd	carwgoB0836
Carg08425	Cucumber (Gy14) v2	carcgybB0707
Carg08425	Cucurbita maxima (Rimu)	carcmaB0994
Carg08425	Cucurbita maxima (Rimu)	carcmaB0996
Carg08425	Cucurbita moschata (Rifu)	carcmoB0966
Carg08425	Cucurbita moschata (Rifu)	carcmoB0968
Carg08425	Cucurbita pepo (Zucchini)	carcpeB0994
Carg08425	Cucurbita pepo (Zucchini)	carcpeB0998
Carg08425	Wild cucumber (PI 183967)	carcpiB0745
Carg08425	Cucumber (Chinese Long) v2	carcuB0730
Carg08425	Cucumber (Chinese Long) v3	carcucB0748
Carg08425	Melon (DHL92) v3.5.1	carmeB0709
Carg08425	Melon (DHL92) v3.6.1	carmedB0722
Carg08425	Watermelon (Charleston Gray)	carwcgB0685
Carg08425	Watermelon (Charleston Gray)	carwcgB0690
Carg08425	Watermelon (97103) v1	carwmB0708