Lsi05G004030 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G004030
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	LuxR family transcriptional regulator, putative
Location	chr05 : 5106912 .. 5107988 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAACCCCCATTCATTTCTCAACGACGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCGAAGGCCAAAATTAGCCGCGACCCTGCCATTTCCCGGCGATTCTCTGGCTCTTACATCAGAAGCTTTCGAGAAGATGCGAGGTCCTTTCGATCAAACATCACTACCATCACTAGCACCGCCTCCTCTCCTGGATACCCTTTTGGAGGTTTTCTTTTTTTCTCTCTCTCTCTCTGGAATTTTGATTCCAGCCATGGATTCTTCTGTTCTTTAACTTCTCTGGGTTTTGTTTTGCAGATGAAATTGACCCAGCTACTTATTCGTTCACTAATGCCATCAAGGGTGAGTTTATTTGAATTTGGGCTTTGCTTCGCCTACAAAGTGTTTGTGAAAATGAGTTTGAGGGAATTGGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTGTGACTGGTTGCTGCTTCTTATGCAGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACTTTGAATTCGAAGTGGAACGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCGTTTAGGAATTTAGCAAACAGAATTGCGATCTCTGCTCCTTTAGTTTACTCCAGTCATTCACAACAAACTCAAACAAAGCCATGTTCCATTACACAAGTAGTTCAGAAACTCCCAATTCCAGGTTAAATCATCTGTCTTCTCCTTTACCCCATCGAGTTTATTCGAATTGGGGGTTGGATGATTTTGATTTCCGTGTGATGATTTTGATTTCTGTGTTATGATTTTCAGAGAAGAAAGTGGATGCCAATGCTATGACCAGAGATGTGGGAACTCAAAGCACACCAACAAACGTTGGTTCAAATAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGAGAGAGCATTAAAGAGATGTGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAATTACTCCCGAGACAGAGGTATGTACCTCACTCCCAATCTTTCTCATAGGCTAA

mRNA sequence

ATGGAGCAACCCCCATTCATTTCTCAACGACGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCGAAGGCCAAAATTAGCCGCGACCCTGCCATTTCCCGGCGATTCTCTGGCTCTTACATCAGAAGCTTTCGAGAAGATGCGAGGTCCTTTCGATCAAACATCACTACCATCACTAGCACCGCCTCCTCTCCTGGATACCCTTTTGGAGATGAAATTGACCCAGCTACTTATTCGTTCACTAATGCCATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACTTTGAATTCGAAGTGGAACGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCGTTTAGGAATTTAGCAAACAGAATTGCGATCTCTGCTCCTTTAGTTTACTCCAGTCATTCACAACAAACTCAAACAAAGCCATGTTCCATTACACAAGTAGTTCAGAAACTCCCAATTCCAGAGAAGAAAGTGGATGCCAATGCTATGACCAGAGATGTGGGAACTCAAAGCACACCAACAAACGTTGGTTCAAATAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGAGAGAGCATTAAAGAGATGTGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAATTACTCCCGAGACAGAGGTATGTACCTCACTCCCAATCTTTCTCATAGGCTAA

Coding sequence (CDS)

ATGGAGCAACCCCCATTCATTTCTCAACGACGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCGAAGGCCAAAATTAGCCGCGACCCTGCCATTTCCCGGCGATTCTCTGGCTCTTACATCAGAAGCTTTCGAGAAGATGCGAGGTCCTTTCGATCAAACATCACTACCATCACTAGCACCGCCTCCTCTCCTGGATACCCTTTTGGAGATGAAATTGACCCAGCTACTTATTCGTTCACTAATGCCATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACTTTGAATTCGAAGTGGAACGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCGTTTAGGAATTTAGCAAACAGAATTGCGATCTCTGCTCCTTTAGTTTACTCCAGTCATTCACAACAAACTCAAACAAAGCCATGTTCCATTACACAAGTAGTTCAGAAACTCCCAATTCCAGAGAAGAAAGTGGATGCCAATGCTATGACCAGAGATGTGGGAACTCAAAGCACACCAACAAACGTTGGTTCAAATAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGAGAGAGCATTAAAGAGATGTGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAATTACTCCCGAGACAGAGGTATGTACCTCACTCCCAATCTTTCTCATAGGCTAA

Protein sequence

MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTITSTASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPCSITQVVQKLPIPEKKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKITPETEVCTSLPIFLIG

Homology

[Close]

BLAST of Lsi05G004030 vs. TrEMBL
Match: A0A0A0L6V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G259700 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.8e-125
Identity = 229/241 (95.02%), Postives = 235/241 (97.51%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           MEQPPFISQRRDEPEFSLREWAAKAKI+RDPA SRRFSGSYIRSFREDARSFRSNITTIT
Sbjct: 1   MEQPPFISQRRDEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPCSITQVVQKLPIPE 180
           LSGEVPMECLSAKSLSGRSFRN  NRIAISAPLVYS+HSQQTQTKPCSI QVVQKLPIPE
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 KKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKITPETE 240
           K++DANA+TRDVGTQSTPTNVGS SPSPASTPPIV+RALKRCELEEDSPNSNSKITP TE
Sbjct: 181 KQLDANALTRDVGTQSTPTNVGSKSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lsi05G004030 vs. TrEMBL
Match: A0A061EHB0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 6.2e-80
Identity = 169/244 (69.26%), Postives = 194/244 (79.51%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           +EQ  + S+R DEPEF+LREW  KA+ISR+   SRR+S SYIRSFREDARSFRSNIT I+
Sbjct: 5   VEQSSYSSRRHDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNIT-IS 64

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNS-WECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDP+TYSFT A+KALQAR++ S WEC S DGF LNSKWNEAEKYICN
Sbjct: 65  STASSPGYSLKDEIDPSTYSFTTALKALQARTVCSGWECLSPDGFALNSKWNEAEKYICN 124

Query: 121 PLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPC-SITQVVQKLPI 180
           PLSGEVPMECLSAK+LSGRSFRNL NRI +SAPLVY SHS   QT P  ++ + V + P 
Sbjct: 125 PLSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVY-SHSCHIQTNPSRTVPEDVAQFPT 184

Query: 181 PEKKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEE-DSPNSNSKITP 240
           PEKK  A +MTRDVGTQSTP ++ S S SPASTP I+ERALKRC  E  DSPN+N+K   
Sbjct: 185 PEKK--AESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTNTKPRA 244

Query: 241 ETEV 242
           E +V
Sbjct: 245 EEQV 244

[Close]

BLAST of Lsi05G004030 vs. TrEMBL
Match: M5WTB7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010553mg PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 168/248 (67.74%), Postives = 195/248 (78.63%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           ME+PP+ S+RRDE EFSLREWA KA+ISR+   SRRFS SY+RSFRED RSFRSNIT I+
Sbjct: 1   MEEPPYGSRRRDETEFSLREWAVKARISRENTNSRRFSASYVRSFREDTRSFRSNIT-IS 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDPATYSFT A+KALQARS  +SWE  S DGF LNSKWNEAEKYICN
Sbjct: 61  STASSPGYNLRDEIDPATYSFTTALKALQARSAYHSWESLSPDGFALNSKWNEAEKYICN 120

Query: 121 PLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPCS---ITQVVQKL 180
           PLSG+VPMECLSAK+LSGRSFRN+ NRI +SAPLVYSSHS+    KP S       V++ 
Sbjct: 121 PLSGQVPMECLSAKTLSGRSFRNITNRITMSAPLVYSSHSRPIHAKPSSNPAKEDFVRQF 180

Query: 181 PIPEKKVDANAMTRDVGTQSTPTNVGSNS-PSPASTPPIVERALKRCELEEDSPNSNSKI 240
           PIPEKK +    TRDVGTQSTP ++ S+S PS ASTP I+ER+L R  +  DSP SN+K+
Sbjct: 181 PIPEKKTEGT--TRDVGTQSTPPDMSSSSPPSSASTPSIIERSLNRFRV-GDSPKSNAKL 240

Query: 241 TPETEVCT 244
             + EVC+
Sbjct: 241 KSDEEVCS 244

[Close]

BLAST of Lsi05G004030 vs. TrEMBL
Match: A0A061EIL5_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.4e-78
Identity = 169/249 (67.87%), Postives = 194/249 (77.91%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           +EQ  + S+R DEPEF+LREW  KA+ISR+   SRR+S SYIRSFREDARSFRSNIT I+
Sbjct: 5   VEQSSYSSRRHDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNIT-IS 64

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNS-WECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDP+TYSFT A+KALQAR++ S WEC S DGF LNSKWNEAEKYICN
Sbjct: 65  STASSPGYSLKDEIDPSTYSFTTALKALQARTVCSGWECLSPDGFALNSKWNEAEKYICN 124

Query: 121 PLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPC-SITQVVQKLPI 180
           PLSGEVPMECLSAK+LSGRSFRNL NRI +SAPLVY SHS   QT P  ++ + V + P 
Sbjct: 125 PLSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVY-SHSCHIQTNPSRTVPEDVAQFPT 184

Query: 181 P-----EKKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEE-DSPNSN 240
           P     EKK  A +MTRDVGTQSTP ++ S S SPASTP I+ERALKRC  E  DSPN+N
Sbjct: 185 PVHLIAEKK--AESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTN 244

Query: 241 SKITPETEV 242
           +K   E +V
Sbjct: 245 TKPRAEEQV 249

[Close]

BLAST of Lsi05G004030 vs. TrEMBL
Match: U5FJR9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13910g PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.4e-77
Identity = 167/249 (67.07%), Postives = 195/249 (78.31%), Query Frame = 1


Query: 2   EQPPFIS-QRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 61
           EQ P+ + QRR+EPEF+LREW  +A+ISR+   SRRFSGS IRSFREDARSFRSNIT I+
Sbjct: 6   EQSPYTNFQRREEPEFNLREWEFRAQISREHTRSRRFSGSNIRSFREDARSFRSNIT-IS 65

Query: 62  STASSPGYPFGDEIDPATYSFTNAIKALQARS--LNSWECFSLDGFTLNSKWNEAEKYIC 121
           STASSPGY   +EIDP+TYSFT A+KALQARS   NSWEC S DGF L+SKWNEAEKYIC
Sbjct: 66  STASSPGYSIREEIDPSTYSFTTALKALQARSGYYNSWECSSPDGFALHSKWNEAEKYIC 125

Query: 122 NPLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKP----CSITQVVQ 181
           NPLSGEVPMECLSAK+LSGRSFRNL NRI +SAPLVYS+HS+Q QTK      +   +V 
Sbjct: 126 NPLSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVYSNHSRQIQTKTTTSIAAHDDIVN 185

Query: 182 KLPIPEKKVDANAMTRDVGTQSTPTNV-GSNSPSPASTPPIVERALKRCELE-EDSPNSN 241
             PI E K++    TRDVGTQSTP +V  S+SPSPASTP I+ER  KRCE+E   +PN N
Sbjct: 186 HFPIKEDKMEGMLNTRDVGTQSTPPDVSSSSSPSPASTPSIIER--KRCEVEGGGTPNCN 245

[Close]

BLAST of Lsi05G004030 vs. TAIR10
Match: AT5G16030.3 (AT5G16030.3 unknown protein)

HSP 1 Score: 197.6 bits (501), Expect = 9.2e-51
Identity = 132/249 (53.01%), Postives = 163/249 (65.46%), Query Frame = 1


Query: 10  RRDEPEF-SLREWAAKAKISRDPAISRRFSGSYIRSFREDAR--SFRS-NITTITSTASS 69
           R DE EF +LREW  +A++ R+   SRRFS SYI SFRED    SFR+ N   I+STASS
Sbjct: 4   RGDEHEFMNLREWDRRARLIRENPSSRRFSASYIGSFREDHHKSSFRTTNFNNISSTASS 63

Query: 70  PGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICNPLSGE 129
           PGY   +EIDP+TYSFTNA+KALQA+++ N+ E  + +GF LNSKWNEAEKYICNPLSGE
Sbjct: 64  PGYTLKEEIDPSTYSFTNALKALQAKTMYNNREWLAQEGFALNSKWNEAEKYICNPLSGE 123

Query: 130 VPMECLSAKSLSGRSFRNLANRIAISAPLVYSS----HSQQTQTKP---CSITQVVQKLP 189
           VPMECLSAK+LS RSFRNL+    +SAPL + S     +   Q KP    ++  + + L 
Sbjct: 124 VPMECLSAKTLSARSFRNLS---TMSAPLHFPSPNPLMNNIAQNKPNNNPNVRVIHEDLY 183

Query: 190 IP----------------EKKVDANAMTRDVGTQSTPT-NVGSNSPSPASTPPIVERALK 230
            P                EKKV    M RDVG QST + ++ S SPSPA TPPI+ER+LK
Sbjct: 184 APDPELLALVNYGGVFLAEKKV--VGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLK 243

[Close]

BLAST of Lsi05G004030 vs. TAIR10
Match: AT3G02500.1 (AT3G02500.1 unknown protein)

HSP 1 Score: 176.0 bits (445), Expect = 2.9e-44
Identity = 108/224 (48.21%), Postives = 141/224 (62.95%), Query Frame = 1


Query: 10  RRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTITSTASSPGYP 69
           R +E EF+LREWA +  ++R+   SRRFS S IRSFRED +S  +N+T I+STASSPGY 
Sbjct: 4   RGEELEFNLREWARQGHLTREDQSSRRFSASCIRSFREDHKSCTTNVT-ISSTASSPGYS 63

Query: 70  FGDEIDPATYSFTNAIKALQARSL--NSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPM 129
             DEIDP+ YSF++A+KALQA+S+   +W+    +G  LNSKWNEAEKYICNPLSGEVP+
Sbjct: 64  LKDEIDPSNYSFSSALKALQAKSVYKKNWDWLKPEGVELNSKWNEAEKYICNPLSGEVPL 123

Query: 130 ECLSAKSLSGRSFRNLANRIA--ISAPLVYSSHSQQTQTKPCSITQVVQKLPIPEKKVDA 189
           ECLS+K+L+ RSFRNL+ + A  +  P  Y+ +  +T      I     + P P    D 
Sbjct: 124 ECLSSKTLNSRSFRNLSTKHAPLMILPSNYNLNIPRTVNPKVRIIHEDPRSPDPVLIQDK 183

Query: 190 NAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEEDSP 230
             +       S   NV     S A T PI+ER  KR    +DSP
Sbjct: 184 KVVGSKRDVVSAQGNV-----SAAKTTPIMERLTKRQVGADDSP 221

[Close]

BLAST of Lsi05G004030 vs. NCBI nr
Match: gi|659123255|ref|XP_008461568.1| (PREDICTED: uncharacterized protein LOC103500139 [Cucumis melo])

HSP 1 Score: 456.8 bits (1174), Expect = 2.4e-125
Identity = 230/241 (95.44%), Postives = 235/241 (97.51%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           MEQPPFISQRR EPEFSLREWAAKAKI+RDPA SRRFSGSYIRSFREDARSFRSNITTIT
Sbjct: 1   MEQPPFISQRRGEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPCSITQVVQKLPIPE 180
           LSGEVPMECLSAKSLSGRSFRN  NRIAISAPLVYS+HSQQTQTKPCSI QVVQKLPIPE
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 KKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKITPETE 240
           K+VDANA+TRDVGTQSTPTNVGSNSPSPASTPPIV+RALKRCELEEDSPNSNSKITP TE
Sbjct: 181 KQVDANALTRDVGTQSTPTNVGSNSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lsi05G004030 vs. NCBI nr
Match: gi|449455789|ref|XP_004145633.1| (PREDICTED: uncharacterized protein LOC101205687 [Cucumis sativus])

HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-125
Identity = 229/241 (95.02%), Postives = 235/241 (97.51%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           MEQPPFISQRRDEPEFSLREWAAKAKI+RDPA SRRFSGSYIRSFREDARSFRSNITTIT
Sbjct: 1   MEQPPFISQRRDEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPCSITQVVQKLPIPE 180
           LSGEVPMECLSAKSLSGRSFRN  NRIAISAPLVYS+HSQQTQTKPCSI QVVQKLPIPE
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 KKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKITPETE 240
           K++DANA+TRDVGTQSTPTNVGS SPSPASTPPIV+RALKRCELEEDSPNSNSKITP TE
Sbjct: 181 KQLDANALTRDVGTQSTPTNVGSKSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 V 242
           V
Sbjct: 241 V 241

[Close]

BLAST of Lsi05G004030 vs. NCBI nr
Match: gi|1009127162|ref|XP_015880548.1| (PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba])

HSP 1 Score: 317.0 bits (811), Expect = 2.9e-83
Identity = 172/247 (69.64%), Postives = 202/247 (81.78%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           ME+ P+ S+RR+E EF+LREW AKA+ISR+   SRR+S SYIRSFREDARSFRS+IT I+
Sbjct: 1   MEKSPYTSRRREEAEFNLREWGAKARISRENTNSRRYSASYIRSFREDARSFRSSIT-IS 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDP+TYSFT A++ALQARS+ NSWEC S DGF LNSKWNEAEKYICN
Sbjct: 61  STASSPGYCLRDEIDPSTYSFTTALQALQARSVYNSWECLSPDGFALNSKWNEAEKYICN 120

Query: 121 PLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPCSIT----QVVQK 180
           PLSGEVPMECLSAK+LSGRSFRNL NRI +SAPL+Y SHS+  QT+P +       VV  
Sbjct: 121 PLSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLIYPSHSRHFQTRPPNPNTVHEDVVHP 180

Query: 181 LPIPEKKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEE-DSPNSNSK 240
           +PIPEKK+   +MTRDVGTQSTP ++ S+SPSPASTPPIVER+LKR  LE  DSPNS +K
Sbjct: 181 VPIPEKKM--GSMTRDVGTQSTPPDLSSSSPSPASTPPIVERSLKRFGLENGDSPNSYAK 240

Query: 241 ITPETEV 242
           +  + EV
Sbjct: 241 LKSQQEV 244

[Close]

BLAST of Lsi05G004030 vs. NCBI nr
Match: gi|590653052|ref|XP_007033315.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 305.4 bits (781), Expect = 8.9e-80
Identity = 169/244 (69.26%), Postives = 194/244 (79.51%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           +EQ  + S+R DEPEF+LREW  KA+ISR+   SRR+S SYIRSFREDARSFRSNIT I+
Sbjct: 5   VEQSSYSSRRHDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNIT-IS 64

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNS-WECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDP+TYSFT A+KALQAR++ S WEC S DGF LNSKWNEAEKYICN
Sbjct: 65  STASSPGYSLKDEIDPSTYSFTTALKALQARTVCSGWECLSPDGFALNSKWNEAEKYICN 124

Query: 121 PLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPC-SITQVVQKLPI 180
           PLSGEVPMECLSAK+LSGRSFRNL NRI +SAPLVY SHS   QT P  ++ + V + P 
Sbjct: 125 PLSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVY-SHSCHIQTNPSRTVPEDVAQFPT 184

Query: 181 PEKKVDANAMTRDVGTQSTPTNVGSNSPSPASTPPIVERALKRCELEE-DSPNSNSKITP 240
           PEKK  A +MTRDVGTQSTP ++ S S SPASTP I+ERALKRC  E  DSPN+N+K   
Sbjct: 185 PEKK--AESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTNTKPRA 244

Query: 241 ETEV 242
           E +V
Sbjct: 245 EEQV 244

[Close]

BLAST of Lsi05G004030 vs. NCBI nr
Match: gi|595941624|ref|XP_007215878.1| (hypothetical protein PRUPE_ppa010553mg [Prunus persica])

HSP 1 Score: 304.7 bits (779), Expect = 1.5e-79
Identity = 168/248 (67.74%), Postives = 195/248 (78.63%), Query Frame = 1


Query: 1   MEQPPFISQRRDEPEFSLREWAAKAKISRDPAISRRFSGSYIRSFREDARSFRSNITTIT 60
           ME+PP+ S+RRDE EFSLREWA KA+ISR+   SRRFS SY+RSFRED RSFRSNIT I+
Sbjct: 1   MEEPPYGSRRRDETEFSLREWAVKARISRENTNSRRFSASYVRSFREDTRSFRSNIT-IS 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDPATYSFT A+KALQARS  +SWE  S DGF LNSKWNEAEKYICN
Sbjct: 61  STASSPGYNLRDEIDPATYSFTTALKALQARSAYHSWESLSPDGFALNSKWNEAEKYICN 120

Query: 121 PLSGEVPMECLSAKSLSGRSFRNLANRIAISAPLVYSSHSQQTQTKPCS---ITQVVQKL 180
           PLSG+VPMECLSAK+LSGRSFRN+ NRI +SAPLVYSSHS+    KP S       V++ 
Sbjct: 121 PLSGQVPMECLSAKTLSGRSFRNITNRITMSAPLVYSSHSRPIHAKPSSNPAKEDFVRQF 180

Query: 181 PIPEKKVDANAMTRDVGTQSTPTNVGSNS-PSPASTPPIVERALKRCELEEDSPNSNSKI 240
           PIPEKK +    TRDVGTQSTP ++ S+S PS ASTP I+ER+L R  +  DSP SN+K+
Sbjct: 181 PIPEKKTEGT--TRDVGTQSTPPDMSSSSPPSSASTPSIIERSLNRFRV-GDSPKSNAKL 240

Query: 241 TPETEVCT 244
             + EVC+
Sbjct: 241 KSDEEVCS 244

The following BLAST results are available for this feature:

BLAST of Lsi05G004030 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G004030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6V9_CUCSA	2.8e-125	95.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G259700 PE=4 SV=1	[more]
A0A061EHB0_THECC	6.2e-80	69.26	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1	[more]
M5WTB7_PRUPE	1.1e-79	67.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010553mg PE=4 SV=1	[more]
A0A061EIL5_THECC	4.4e-78	67.87	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1	[more]
U5FJR9_POPTR	6.4e-77	67.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13910g PE=4 SV=1	[more]

BLAST of Lsi05G004030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16030.3	9.2e-51	53.01	unknown protein	[more]
AT3G02500.1	2.9e-44	48.21	unknown protein	[more]

BLAST of Lsi05G004030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123255\|ref\|XP_008461568.1\|	2.4e-125	95.44	PREDICTED: uncharacterized protein LOC103500139 [Cucumis melo]	[more]
gi\|449455789\|ref\|XP_004145633.1\|	4.1e-125	95.02	PREDICTED: uncharacterized protein LOC101205687 [Cucumis sativus]	[more]
gi\|1009127162\|ref\|XP_015880548.1\|	2.9e-83	69.64	PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba]	[more]
gi\|590653052\|ref\|XP_007033315.1\|	8.9e-80	69.26	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|595941624\|ref\|XP_007215878.1\|	1.5e-79	67.74	hypothetical protein PRUPE_ppa010553mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G004030.1	Lsi05G004030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36748	FAMILY NOT NAMED	coord: 1..241 score: 3.5E
None	No IPR available	PANTHER	PTHR36748:SF1	SUBFAMILY NOT NAMED	coord: 1..241 score: 3.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G004030	Csa3G259700	Cucumber (Chinese Long) v2	culsiB212
Lsi05G004030	CSPI03G20390	Wild cucumber (PI 183967)	cpilsiB210
Lsi05G004030	Cucsa.031680	Cucumber (Gy14) v1	cgylsiB004
Lsi05G004030	CmaCh14G007950	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G004030	CmaCh01G003960	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G004030	CmoCh01G004200	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G004030	CmoCh14G008110	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G004030	Cla007116	Watermelon (97103) v1	lsiwmB363
Lsi05G004030	MELO3C023762	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G004030	ClCG05G012070	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G004030	MELO3C023762.2	Melon (DHL92) v3.6.1	lsimedB399
Lsi05G004030	Cla97C05G093980	Watermelon (97103) v2	lsiwmbB329
Lsi05G004030	Bhi01G001439	Wax gourd	lsiwgoB447
Lsi05G004030	Cp4.1LG03g06310	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G004030	Cp4.1LG02g17070	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G004030	CsGy3G020130	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G004030	Carg22286	Silver-seed gourd	carlsiB435
Lsi05G004030	Carg07489	Silver-seed gourd	carlsiB700
Lsi05G004030	CsaV3_3G020330	Cucumber (Chinese Long) v3	cuclsiB231

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None