Carg07489 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07489
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	LuxR family transcriptional regulator, putative
Location	Cucurbita_argyrosperma_scaffold_019 : 1095168 .. 1098276 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGCACAAGGCATTTGAGTAGTGAAAAGTTTGGAGGTCTGGTAAATTTGTTAAGCTCAAAATTCCATTTTCATGGAGCAACCTCCATTCATTTCTCACCGGCGAGACGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCTAAAATTGGCCGCGACCCCGCCATTTCCAGGCGATTCTCCGGGTCCTACATCAGAAGCTTTCGAGAAGACGCGAGGTCGTTTCGATCAAATGTCACCACCGTCACTAGCACCGCCTCCTCTCCTGGATACCCTTTCGGAGGTTTTTGTTTTCTTTTTCTCTCTGTGGAGTTTTGATTCTTGCTATGGATTCCTCTGTTCTTTAACTTATCTGGGGTCTGTTTGCAGACGAAATTGACCCTGCTACTTATTCGTTCACTAATGCTATCAAGGGTGAGTTTTGAATTCGGATTCTACTTTGCCTACAAGGTGTTCTTGAAAATGCGTGTTCTGGAATTGGGAGTTTTGAGGTTGTTTTTTGTGATTGGGTGCGGCTTCTTGTGTAGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACGTTGAATTCGAAGTGGAATGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCATTCAAGAACTTAGCGAACAGAATTACCATATCTGCTCCTTTAGTTTATTCCAATCATTCGCAAATTGGAACAAAGCCATATTCTATTTCACAACTAGTTCAGAAACTCCCAATTCCAGGTCGAATCATCTATGTTCTTCTTTAGAATTTCGAGTTTGATCGAATTTGGGATTGGAAAATTTTGAATTCCTGTTGTGATTTTCAGAGAACAAAGTGGAAGCCAATGGCATGACCAGAGATATGGGAACTCAAAGCACACCAACAGTCGTTGGTTCAAACAGTCCTAGTCCTGCTTCCACGCCTCCTATTGTGGAGAGAGCATTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAAGTACTCCCGAGACAGAGGTATGCCACCTCCAATCTTTCATAGGCTATAATCTTTGTTATATTCGTCTGATGCTTGTAGTTTGATTTCAACAATGTCTAAATGGAAAATTTGAAAGGAGTTCTCAAATTAACCATTGAGAGGATAGTTTATGATTCATATAATGTTTATAAATATAGTTTTAACACACTGATAAGCTCATAAGTTAACACGGCAGCCAAGAAATGAGTTGTTATTGATGTTAATTTTTCAGAATGAGACTTAGTTTTAGTGAACGTTTGAAACAATTTGGCTTGGGATCCCAACATTATGGCCTTTGTTCATAGCTTGAGGAGAAAAGCTTAATGCAAAATTGAACTGTCAGCCTAACCCTCAAAGAATATAATCTACAAGAAGAAACAAGTGGATCATAAGTGAAGTTCAGCTTTCTCTCCAATCTATTTCCCTCCAAGGATGAGCCAACCAAATCAGGGTTGTCACCATACATGTCATGAAACAGAGTGCTATAACCATCCAAGGTGGGGGACTGTTTTTGTTAGCCACAAGTTGTTATGTTTTGGTCCCTTTTTGATACTATTTTTTTCCTCATATTGGCCTACTTTCCAGCCCGTACGGTTGTGATTATCTCTATACCATAGAAACATATTTTTCTAGAAAATAAAGTGATAATATCAGATGTCAGAAAACCCAGCCTTAAGTTTCAGAAGCAAACAGAAAGTTCAATTCTTGGTGTTAGAGAGATTTGTCTCAACACTTGAATTACTGCATAAATTTCAAATTTCCCTCCTTGAAATACGTATCTGTTCGTTTTCGTTCTTCGGTGTCTATTTCATTTTCTTTCCTTCTACCTCAGGGGGGGACCCATCAAAATTCTCCTGTTCATACATATTCCTTTGTTTTTACATCAAGATCTCGAGCTATATTAATATTTCTCATTGAAAATGCTGTTGTAGATCTTCTTTTTTTCATGTATATTCCCTTATGTTGAGGATTGTCGGGAGGTAGTTCCATGATCATGAGTTTATAAGTAAGGAATAAATCTCTATTAATATGTGACCTTTTGGGGAAACCAAAAGCAATGCCACGAGAGCTTATGCTTAAAGAGGTTCCTAACACCTTAGTGGTCCATTAAGCAGCAATAAGGTTATTACCCGAATGAGCATCGAGGCCTTAAAAAGCCTTTTTAGATGACACTGATATAAAGCAACTTTATCTGAATGCAGGTGATAAGGAGAGAATTGAAGGAGGAGAGAGCAAAAGAAGAAGAAAAGGAAGTAGTACATAGAGAAACAATAGCAGAAGAGAAGTTCAAGCAAGGAGGATGCTTGTCATGGATGATGAAGAAGAAGAAGCAGAAAGAAGAAGAGAGATCAAGAAGAAAGAGGTTAATTTGTGATCTAAAACTCAAAGGTTGTTGAAAAACAGTGTGAAAAAGCTAAGAACAAATTGAAAAACATGGAAAAGCAGAGATTTGGATTATGTGTTAATGCAGCAAAATGGAAGAACAGGGGCAGGTGAGAATGTGGGTTGGTATTGGAGATGATGAGAGGGGTGGGTATCATAAAGGATTATGTGTTGTGTTGGTGTTAGTGGTCCTATAAGCATTTGCCTCTCAGCCATTTCAATATCTGTTCTCTGTGGCTTCACGTGCATGCTTTTGTCTTTGTGTTCCTGAATAGTGTAAGGTAAGGGCTCCAAAGGGCCTCCCCTTTTTGTTTTGAACTTTCAAATCTCTCCCTCTCTCGTAGTTATTATTTTGACCTTTGTTGTAGAATTTTTATACTGTGTTTAACAAAAATCAATGTGGATACTACTAGTTAGACTCCTATCTCTACGCCCATATCGAACCACCTTTTTTTGAATTAGAAACTAGATTGGATACCACGTTGTTTAGAATCTAAGTTTTGATGATGCTATAATAAAGTTTATTGTTACGAAGTTGAGAACTGACTTATTGGAAAGATAGGATTAGGTAATTCTACTGGAGAAGGCCATCAACACTCAACTTACCAAAATGTATCGGGAGTAAGTAGTTCAAGGAGCATGGGATAGGT

mRNA sequence

CAAAGCACAAGGCATTTGAGTAGTGAAAAGTTTGGAGGTCTGGTAAATTTGTTAAGCTCAAAATTCCATTTTCATGGAGCAACCTCCATTCATTTCTCACCGGCGAGACGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCTAAAATTGGCCGCGACCCCGCCATTTCCAGGCGATTCTCCGGGTCCTACATCAGAAGCTTTCGAGAAGACGCGAGGTCGTTTCGATCAAATGTCACCACCGTCACTAGCACCGCCTCCTCTCCTGGATACCCTTTCGGAGACGAAATTGACCCTGCTACTTATTCGTTCACTAATGCTATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACGTTGAATTCGAAGTGGAATGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCATTCAAGAACTTAGCGAACAGAATTACCATATCTGCTCCTTTAGTTTATTCCAATCATTCGCAAATTGGAACAAAGCCATATTCTATTTCACAACTAGTTCAGAAACTCCCAATTCCAGAGAACAAAGTGGAAGCCAATGGCATGACCAGAGATATGGGAACTCAAAGCACACCAACAGTCGTTGGTTCAAACAGTCCTAGTCCTGCTTCCACGCCTCCTATTGTGGAGAGAGCATTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAAGTACTCCCGAGACAGAGGTGATAAGGAGAGAATTGAAGGAGGAGAGAGCAAAAGAAGAAGAAAAGGAAGTAGTACATAGAGAAACAATAGCAGAAGAGAAGTTCAAGCAAGGAGGATGCTTGTCATGGATGATGAAGAAGAAGAAGCAGAAAGAAGAAGAGAGATCAAGAAGAAAGAGGTTAATTTGTGATCTAAAACTCAAAGGTTGTTGAAAAACAGTGTGAAAAAGCTAAGAACAAATTGAAAAACATGGAAAAGCAGAGATTTGGATTATGTGTTAATGCAGCAAAATGGAAGAACAGGGGCAGGTGAGAATGTGGGTTGGTATTGGAGATGATGAGAGGGGTGGGTATCATAAAGGATTATGTGTTGTGTTGGTGTTAGTGGTCCTATAAGCATTTGCCTCTCAGCCATTTCAATATCTGTTCTCTGTGGCTTCACGTGCATGCTTTTGTCTTTGTGTTCCTGAATAGTGTAAGGTAAGGGCTCCAAAGGGCCTCCCCTTTTTGTTTTGAACTTTCAAATCTCTCCCTCTCTCGTAGTTATTATTTTGACCTTTGTTGTAGAATTTTTATACTGTGTTTAACAAAAATCAATGTGGATACTACTAGTTAGACTCCTATCTCTACGCCCATATCGAACCACCTTTTTTTGAATTAGAAACTAGATTGGATACCACGTTGTTTAGAATCTAAGTTTTGATGATGCTATAATAAAGTTTATTGTTACGAAGTTGAGAACTGACTTATTGGAAAGATAGGATTAGGTAATTCTACTGGAGAAGGCCATCAACACTCAACTTACCAAAATGTATCGGGAGTAAGTAGTTCAAGGAGCATGGGATAGGT

Coding sequence (CDS)

ATGGAGCAACCTCCATTCATTTCTCACCGGCGAGACGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCTAAAATTGGCCGCGACCCCGCCATTTCCAGGCGATTCTCCGGGTCCTACATCAGAAGCTTTCGAGAAGACGCGAGGTCGTTTCGATCAAATGTCACCACCGTCACTAGCACCGCCTCCTCTCCTGGATACCCTTTCGGAGACGAAATTGACCCTGCTACTTATTCGTTCACTAATGCTATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACGTTGAATTCGAAGTGGAATGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCCATGGAGTGTTTGTCTGCAAAATCGCTTAGTGGGAGGTCATTCAAGAACTTAGCGAACAGAATTACCATATCTGCTCCTTTAGTTTATTCCAATCATTCGCAAATTGGAACAAAGCCATATTCTATTTCACAACTAGTTCAGAAACTCCCAATTCCAGAGAACAAAGTGGAAGCCAATGGCATGACCAGAGATATGGGAACTCAAAGCACACCAACAGTCGTTGGTTCAAACAGTCCTAGTCCTGCTTCCACGCCTCCTATTGTGGAGAGAGCATTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAAGTACTCCCGAGACAGAGGTGATAAGGAGAGAATTGAAGGAGGAGAGAGCAAAAGAAGAAGAAAAGGAAGTAGTACATAGAGAAACAATAGCAGAAGAGAAGTTCAAGCAAGGAGGATGCTTGTCATGGATGATGAAGAAGAAGAAGCAGAAAGAAGAAGAGAGATCAAGAAGAAAGAGGTTAATTTGTGATCTAAAACTCAAAGGTTGTTGA

Protein sequence

MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVTSTASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPENKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEVIRRELKEERAKEEEKEVVHRETIAEEKFKQGGCLSWMMKKKKQKEEERSRRKRLICDLKLKGC

Homology

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BLAST of Carg07489 vs. NCBI nr
Match: XP_022948348.1 (uncharacterized protein LOC111452052 [Cucurbita moschata])

HSP 1 Score: 489.2 bits (1258), Expect = 1.0e-134
Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT
Sbjct: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180
           LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN
Sbjct: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180

Query: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEV 240
           KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPI+ERALKRCELEEDSPNSNSKSTPETEV
Sbjct: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIMERALKRCELEEDSPNSNSKSTPETEV 240

Query: 241 IRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICDLKL 300
           IRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICDLKL
Sbjct: 241 IRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICDLKL 300

Query: 301 KGC 304
           KGC
Sbjct: 301 KGC 303

[Close]

BLAST of Carg07489 vs. NCBI nr
Match: XP_023523237.1 (uncharacterized protein LOC111787494 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.0 bits (1229), Expect = 2.3e-131
Identity = 295/303 (97.36%), Postives = 297/303 (98.02%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQPPFISHRRDEPEF+LREW AKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT
Sbjct: 1   MEQPPFISHRRDEPEFNLREWVAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180
           LSGEVPMECLSAKSLSGRSFKNLANRI ISAPLVYS+HSQI TKPYSISQLVQKLPIPEN
Sbjct: 121 LSGEVPMECLSAKSLSGRSFKNLANRIAISAPLVYSSHSQIETKPYSISQLVQKLPIPEN 180

Query: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEV 240
           KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEV
Sbjct: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEV 240

Query: 241 IRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICDLKL 300
           IRREL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIC LKL
Sbjct: 241 IRRELNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICHLKL 300

Query: 301 KGC 304
           KGC
Sbjct: 301 KGC 303

[Close]

BLAST of Carg07489 vs. NCBI nr
Match: XP_022997765.1 (uncharacterized protein LOC111492625 isoform X1 [Cucurbita maxima])

HSP 1 Score: 475.7 bits (1223), Expect = 1.2e-130
Identity = 294/303 (97.03%), Postives = 296/303 (97.69%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARS RSNVT VT
Sbjct: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSLRSNVTAVT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEI+PATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEINPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180
           LSGEVPMECLSAKSLSGRSFKNLANRI ISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN
Sbjct: 121 LSGEVPMECLSAKSLSGRSFKNLANRIAISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180

Query: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEV 240
           KVEANGMTRD+GTQSTP VVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEV
Sbjct: 181 KVEANGMTRDVGTQSTPPVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETEV 240

Query: 241 IRRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICDLKL 300
           IRREL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIC LKL
Sbjct: 241 IRRELNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLICHLKL 300

Query: 301 KGC 304
           KGC
Sbjct: 301 KGC 303

[Close]

BLAST of Carg07489 vs. NCBI nr
Match: XP_022997766.1 (uncharacterized protein LOC111492625 isoform X2 [Cucurbita maxima])

HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127
Identity = 233/239 (97.49%), Postives = 235/239 (98.33%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARS RSNVT VT
Sbjct: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSLRSNVTAVT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEI+PATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEINPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180
           LSGEVPMECLSAKSLSGRSFKNLANRI ISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN
Sbjct: 121 LSGEVPMECLSAKSLSGRSFKNLANRIAISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180

Query: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETE 240
           KVEANGMTRD+GTQSTP VVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETE
Sbjct: 181 KVEANGMTRDVGTQSTPPVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETE 239

[Close]

BLAST of Carg07489 vs. NCBI nr
Match: XP_023523238.1 (uncharacterized protein LOC111787494 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.6 bits (1163), Expect = 1.1e-123
Identity = 226/231 (97.84%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQPPFISHRRDEPEF+LREW AKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT
Sbjct: 1   MEQPPFISHRRDEPEFNLREWVAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKLPIPEN 180
           LSGEVPMECLSAKSLSGRSFKNLANRI ISAPLVYS+HSQI TKPYSISQLVQKLPIPEN
Sbjct: 121 LSGEVPMECLSAKSLSGRSFKNLANRIAISAPLVYSSHSQIETKPYSISQLVQKLPIPEN 180

Query: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSN 232
           KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSN
Sbjct: 181 KVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSN 231

[Close]

BLAST of Carg07489 vs. TAIR10
Match: AT5G16030.3 (unknown protein)

HSP 1 Score: 199.1 bits (505), Expect = 3.8e-51
Identity = 126/247 (51.01%), Postives = 165/247 (66.80%), Query Frame = 0


Query: 10  RRDEPEF-SLREWAAKAKIGRDPAISRRFSGSYIRSFRED--ARSFR-SNVTTVTSTASS 69
           R DE EF +LREW  +A++ R+   SRRFS SYI SFRED    SFR +N   ++STASS
Sbjct: 4   RGDEHEFMNLREWDRRARLIRENPSSRRFSASYIGSFREDHHKSSFRTTNFNNISSTASS 63

Query: 70  PGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICNPLSGE 129
           PGY   +EIDP+TYSFTNA+KALQA+++ N+ E  + +GF LNSKWNEAEKYICNPLSGE
Sbjct: 64  PGYTLKEEIDPSTYSFTNALKALQAKTMYNNREWLAQEGFALNSKWNEAEKYICNPLSGE 123

Query: 130 VPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQI-----GTKPY---SISQLVQKLP 189
           VPMECLSAK+LS RSF+NL+   T+SAPL + + + +       KP    ++  + + L 
Sbjct: 124 VPMECLSAKTLSARSFRNLS---TMSAPLHFPSPNPLMNNIAQNKPNNNPNVRVIHEDLY 183

Query: 190 IPENKV--------------EANGMTRDMGTQSTPTV-VGSNSPSPASTPPIVERALKRC 229
            P+ ++              +  GM RD+G QST +V + S SPSPA TPPI+ER+LKR 
Sbjct: 184 APDPELLALVNYGGVFLAEKKVVGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLKRH 243

[Close]

BLAST of Carg07489 vs. TAIR10
Match: AT3G02500.1 (unknown protein)

HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43
Identity = 107/229 (46.72%), Postives = 144/229 (62.88%), Query Frame = 0


Query: 10  RRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVTSTASSPGYP 69
           R +E EF+LREWA +  + R+   SRRFS S IRSFRED +S  +NV T++STASSPGY 
Sbjct: 4   RGEELEFNLREWARQGHLTREDQSSRRFSASCIRSFREDHKSCTTNV-TISSTASSPGYS 63

Query: 70  FGDEIDPATYSFTNAIKALQARSL--NSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPM 129
             DEIDP+ YSF++A+KALQA+S+   +W+    +G  LNSKWNEAEKYICNPLSGEVP+
Sbjct: 64  LKDEIDPSNYSFSSALKALQAKSVYKKNWDWLKPEGVELNSKWNEAEKYICNPLSGEVPL 123

Query: 130 ECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKPYSISQLVQKL--------PIPE 189
           ECLS+K+L+ RSF+NL+   T  APL+    +     P +++  V+ +        P+  
Sbjct: 124 ECLSSKTLNSRSFRNLS---TKHAPLMILPSNYNLNIPRTVNPKVRIIHEDPRSPDPVLI 183

Query: 190 NKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSP 229
              +  G  RD+       V    + S A T PI+ER  KR    +DSP
Sbjct: 184 QDKKVVGSKRDV-------VSAQGNVSAAKTTPIMERLTKRQVGADDSP 221

[Close]

BLAST of Carg07489 vs. TrEMBL
Match: tr|A0A1S3CFH4|A0A1S3CFH4_CUCME (uncharacterized protein LOC103500139 OS=Cucumis melo OX=3656 GN=LOC103500139 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 3.4e-118
Identity = 218/246 (88.62%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQPPFIS RR EPEFSLREWAAKAKI RDPA SRRFSGSYIRSFREDARSFRSN+TT+T
Sbjct: 1   MEQPPFISQRRGEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHS-QIGTKPYSISQLVQKLPIPE 180
           LSGEVPMECLSAKSLSGRSF+N  NRI ISAPLVYSNHS Q  TKP SI+Q+VQKLPIPE
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 NKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETE 240
            +V+AN +TRD+GTQSTPT VGSNSPSPASTPPIV+RALKRCELEEDSPNSNSK TP TE
Sbjct: 181 KQVDANALTRDVGTQSTPTNVGSNSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 VIRREL 246
           VI+RE+
Sbjct: 241 VIKREM 246

[Close]

BLAST of Carg07489 vs. TrEMBL
Match: tr|A0A0A0L6V9|A0A0A0L6V9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259700 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 5.7e-118
Identity = 217/246 (88.21%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQPPFIS RRDEPEFSLREWAAKAKI RDPA SRRFSGSYIRSFREDARSFRSN+TT+T
Sbjct: 1   MEQPPFISQRRDEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHS-QIGTKPYSISQLVQKLPIPE 180
           LSGEVPMECLSAKSLSGRSF+N  NRI ISAPLVYSNHS Q  TKP SI+Q+VQKLPIPE
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 NKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPETE 240
            +++AN +TRD+GTQSTPT VGS SPSPASTPPIV+RALKRCELEEDSPNSNSK TP TE
Sbjct: 181 KQLDANALTRDVGTQSTPTNVGSKSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 VIRREL 246
           VI+RE+
Sbjct: 241 VIKREM 246

[Close]

BLAST of Carg07489 vs. TrEMBL
Match: tr|A0A1R3IC13|A0A1R3IC13_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13154 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.3e-81
Identity = 165/243 (67.90%), Postives = 195/243 (80.25%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQ  + S R DEPEF+LREW  KA+I R+   SRR+S SYIRSFREDARSFRSN+ T++
Sbjct: 1   MEQTSYSSRRYDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNI-TIS 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDP+TYSFT A+KALQA+++ +SWEC S DGF LNSKW+EAEKYICN
Sbjct: 61  STASSPGYSLKDEIDPSTYSFTTALKALQAKTVYSSWECSSPDGFALNSKWSEAEKYICN 120

Query: 121 PLSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHSQIGTKP-YSISQLVQKLPIP 180
           PLSGEVPMECLSAK+LSGRSF+N+ NRIT+SAPLVYS+   I TKP  ++ + + + PIP
Sbjct: 121 PLSGEVPMECLSAKTLSGRSFRNITNRITMSAPLVYSHSCHIQTKPSRTVPEDIAQFPIP 180

Query: 181 ENKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELE-EDSPNSNSKSTPE 240
           E K E+  MTRD+GTQSTP  + S S SPASTP I+ERALKRC  E EDSPNSNSKS  E
Sbjct: 181 EKKAES--MTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENEDSPNSNSKSKTE 240

[Close]

BLAST of Carg07489 vs. TrEMBL
Match: tr|A0A2C9WM98|A0A2C9WM98_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G108300 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.1e-79
Identity = 160/243 (65.84%), Postives = 196/243 (80.66%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQ P+ S RR+E +F+LREWA++A+I R+   SRRFSGS+IRSFREDARSFRS++ T++
Sbjct: 6   MEQSPYGSRRREEADFNLREWASRAQISRENTKSRRFSGSHIRSFREDARSFRSSI-TIS 65

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   +EIDP+TYSFT A+KALQAR++ NSWEC S DGF LNSKWNEAEKYICN
Sbjct: 66  STASSPGYTLKEEIDPSTYSFTAALKALQARAVYNSWECLSPDGFALNSKWNEAEKYICN 125

Query: 121 PLSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYS--NHSQIGTKPYSISQLVQKLPI 180
           PLSGEVPMECLSAK+LSGRSF+N ANRIT+SAPLVYS  + +++ TKPY ++     +P 
Sbjct: 126 PLSGEVPMECLSAKTLSGRSFRNSANRITMSAPLVYSTTHSNKVHTKPY-VATPDDCVPF 185

Query: 181 PENKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELEEDSPNSNSKSTPE 240
           P  + +  G TRD+GTQSTP  + S+SPSPASTPPI+ER+LKRCE  EDSP  N K   E
Sbjct: 186 PLQEKKMEGTTRDVGTQSTPPELSSSSPSPASTPPILERSLKRCEAGEDSPKCNGKLRAE 245

[Close]

BLAST of Carg07489 vs. TrEMBL
Match: tr|A0A1R3JIX3|A0A1R3JIX3_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16191 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-79
Identity = 165/243 (67.90%), Postives = 195/243 (80.25%), Query Frame = 0


Query: 1   MEQPPFISHRRDEPEFSLREWAAKAKIGRDPAISRRFSGSYIRSFREDARSFRSNVTTVT 60
           MEQ  + S R DEPEF+LREW  KA+I R+   SRR+S SYIRSFREDARSFRSN+ T++
Sbjct: 5   MEQTSYTSRRYDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNI-TIS 64

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICN 120
           STASSPGY   DEIDP+TYSFT A+KALQA+++ +SWEC S DGF LNSKW+EAEKYICN
Sbjct: 65  STASSPGYSLKDEIDPSTYSFTTALKALQAKTVYSSWECSSPDGFALNSKWSEAEKYICN 124

Query: 121 PLSGEVPMECLSAKSLSGRSFKNLANRITISAPLVYSNHS-QIGTKP-YSISQLVQKLPI 180
           PLSGEVPMECLSAK+LSGRSF+N+ NRIT+SAPLVYS+ S  I TKP  ++ + + + PI
Sbjct: 125 PLSGEVPMECLSAKTLSGRSFRNITNRITMSAPLVYSHSSCHIQTKPSRTVPEDIAQFPI 184

Query: 181 PENKVEANGMTRDMGTQSTPTVVGSNSPSPASTPPIVERALKRCELE-EDSPNSNSKSTP 240
           PE K E+  MTRD+GTQSTP  + S S SPASTP I+ERALKRC  E EDSPNSNSKS  
Sbjct: 185 PEKKAES--MTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENEDSPNSNSKSKT 244

The following BLAST results are available for this feature:

BLAST of Carg07489 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948348.1	1.0e-134	99.67	uncharacterized protein LOC111452052 [Cucurbita moschata]	[more]
XP_023523237.1	2.3e-131	97.36	uncharacterized protein LOC111787494 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022997765.1	1.2e-130	97.03	uncharacterized protein LOC111492625 isoform X1 [Cucurbita maxima]	[more]
XP_022997766.1	1.6e-127	97.49	uncharacterized protein LOC111492625 isoform X2 [Cucurbita maxima]	[more]
XP_023523238.1	1.1e-123	97.84	uncharacterized protein LOC111787494 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg07489 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16030.3	3.8e-51	51.01	unknown protein	[more]
AT3G02500.1	1.0e-43	46.72	unknown protein	[more]

BLAST of Carg07489 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg07489 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CFH4\|A0A1S3CFH4_CUCME	3.4e-118	88.62	uncharacterized protein LOC103500139 OS=Cucumis melo OX=3656 GN=LOC103500139 PE=...	[more]
tr\|A0A0A0L6V9\|A0A0A0L6V9_CUCSA	5.7e-118	88.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G259700 PE=4 SV=1	[more]
tr\|A0A1R3IC13\|A0A1R3IC13_COCAP	7.3e-81	67.90	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_13154 PE=4 ...	[more]
tr\|A0A2C9WM98\|A0A2C9WM98_MANES	1.1e-79	65.84	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G108300 PE=4 SV=...	[more]
tr\|A0A1R3JIX3\|A0A1R3JIX3_9ROSI	1.4e-79	67.90	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_16191 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07489-RA	Carg07489-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 242..262
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..241
None	No IPR available	PANTHER	PTHR36748	FAMILY NOT NAMED	coord: 6..302

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07489	Cla007116	Watermelon (97103) v1	carwmB0761
Carg07489	Csa3G259700	Cucumber (Chinese Long) v2	carcuB0780
Carg07489	MELO3C023762	Melon (DHL92) v3.5.1	carmeB0757
Carg07489	ClCG05G012070	Watermelon (Charleston Gray)	carwcgB0739
Carg07489	CSPI03G20390	Wild cucumber (PI 183967)	carcpiB0798
Carg07489	Cucsa.031680	Cucumber (Gy14) v1	carcgyB0854
Carg07489	CmaCh01G003960	Cucurbita maxima (Rimu)	carcmaB1059
Carg07489	CmaCh14G007950	Cucurbita maxima (Rimu)	carcmaB1057
Carg07489	CmoCh01G004200	Cucurbita moschata (Rifu)	carcmoB1033
Carg07489	CmoCh14G008110	Cucurbita moschata (Rifu)	carcmoB1031
Carg07489	Lsi05G004030	Bottle gourd (USVL1VR-Ls)	carlsiB700
Carg07489	Cp4.1LG02g17070	Cucurbita pepo (Zucchini)	carcpeB1072
Carg07489	Cp4.1LG03g06310	Cucurbita pepo (Zucchini)	carcpeB1073
Carg07489	CsGy3G020130	Cucumber (Gy14) v2	carcgybB0757
Carg07489	MELO3C023762.2	Melon (DHL92) v3.6.1	carmedB0772
Carg07489	CsaV3_3G020330	Cucumber (Chinese Long) v3	carcucB0801
Carg07489	Cla97C05G093980	Watermelon (97103) v2	carwmbB0795
Carg07489	Bhi01G001439	Wax gourd	carwgoB0896

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg07489	Carg22286	Silver-seed gourd	carcarB471

The following block(s) are covering this gene:

None