Cp4.1LG03g06310 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g06310
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	LuxR family transcriptional regulator, putative
Location	Cp4.1LG03 : 4160268 .. 4163481 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTTAAATTTGAAAAAAATAGTGGGAATTTGGCAAAGCACATGCAAGAGGTATTTTAGTAGTAGTAGGGACAATGAAAAGTTTGAATGTCTGATAAAATTTGATAAGCTCAAAATTCCATTTCCATGGAGCAACCTACATTCATTTCTCACCGGCGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCCAAACTTAACCGCGACCCCACCATTTCCCGGCGATTCTCCGGCTCCTACATCAGAAGCTTTCGAGAAGACGCCAGGTCGTTTCGATCAAACATCACCAGCACCGCCTCCTCTCCCGGATACCCGTTCGGAGGTTTTTGTTCTTCTTTATCTATTTCTCGCTCTGGAATTTTTGTTTCCGGCCATGGATTCTTCTCTAACTTCTCTGAGTTACATTTTACAGACGAAATTGACCCAGCTACGTATTCGTTTACTAACGCCATCAAGGGTGAGTTCATTTGAATTCGGATTTTGAATTGCCTACGAAGTGTTTGTGAAAATGACTGTGAGGGAATTGGTTGGTGTTTATGGGCGCTGCTTCTTGTGCAGCACTGCAAGCCAGGTCACTTAACAGTTGGGAATGCTTTTCTCTCGATGGGTTTACTTTAAATTCGAAGTGGAACGAGGCTGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCTATGGAGTGTTTGTCTGCAAAATCACTTAGTGGGAGGTCGTTTAGGAACTTAGCCAACAGAATTGCAGTGTCTGCTCCTTTAGTTTACTCAAATCATTCACAACAGATTCAAACAAAGCCATGTTCTATCACACAAGTAGTTCAGAAACTCCCAATTCCAGGTTGAATCATCTGTCTTCTTCTTTATACTTCTAGTTTGTTCCTGTTGGGGTTGGAGGATTTTGAATGAATTCTCTGGTTGTGATTTTCAGATAAGAAAGTGGATGCTAATGCTATGACTAGAGATGTGGGAACTCAAAGCACACCACCAAACGTTGGTTCATCTAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGATAGAGCATTAAAGAGATGCGAATTGGAAGAAAACTCTCCCAGTTCCAATTCTAAGGTTACTCCCGAAACAGAGGTATGGGAAATCCAATCTTTCATAGGCTAGTTTGATTTCAAGAACGTCTACATCAGAGCTAATTGGTAGTTGGGAATTTTGAAATCATCCCTAAGCTAATAATTCCCACTAAATCCAAACAAGTAAGTGGATGGGTTATGATGAATAGAATATAACAAGTGTGAATCATTATTAATCAGAGAAGAAATGGCATTGAAGGAGTTTACAAAAGTTGGATTTGATGGAGATCTTACAGGAAAATTGATGTTGATTTGTTGGAATGAATTTGATATGATTCTGTTTTAGAGAACATTTAGAACAGTTTGCTGGTGATCCCAGCCAGCATATGATCTGCCATTCTTCAGAGCTTGAGGAGAAAAGCTTCTGAGCCTGTGAAGTTAATGCAAAGTTTAAATGTTAGACTAAGCATCACGAATAGAATCTAAGAAAAGAAAGAAAACAAGTGGAGCATAAGTGAAGTTCAGCTTTCTCAGACATAAAAGCTTTGTCTCCAATCTATTCTATCCTTCCCAAACAGCCCCACTAAGGATGAGGCAACCAAATCTGATTGTCCCGATACATGTCATAAAACAGAGTACTATACCCATCCAAGGTGGGGGACTGTTTTTGCTAGCCATAAGTTGATACAATTTTGGTCCCTTTTTGATATTTCTTCTCTCACATTGGCCTACTTTCCAGCTCATACAGTTGTGACTGTCTCTGCATTGTAGAAACTTATTTTTTCTTGAAATTAAAGTCATAATATTCAGATGTCAGAAAACCCTGCCTTGAACTTTCAGAAGGAAGAGAAAATTCAAATCTTGGTGTTCTCTCGACACTTGAATTAGTGCATAAATTTCAAATTTCCCTCCTTGAACTCTGTATTTGTTTTTTTCCATTCCTCTCTATCTATTTCATTTTCCTTTCTTTTACCTTAGTGGAGCCCATCGAGATTTTCCCTTACATACATGTTCCTTTGTTTTTCATCAAGAATCTCCTCTCTATCTCTGTATATTTCTCGAGATTCTCATTGAAAAGGCAGCTGCAGATCTTCTTTTTCCTTCTTTCTGAAAGTTGTGGCCATATATGTTCCCTTTTTAGTCGATTGAGAAACAATAAGTTGCTGAATGGTTGCTTCCTCAACCATTAAAACCATCAAGAAATGGGCAGTGTTGAAACTTGTATTTTCTGCTAAGATCAAGGGAAATTTGTTGTTGCAAACTCTTAACTGTTCGTGGACAAATTAGAGGTTAATAATCCATCATTCCTCCTGTAATTCTCAAAAATCTCATTACTTAAACTTGTGTGGACAAGTCGAAATGTAAGAAGTTCCAAAAAGTGCAATCTGAATTATTACCAAGCTCAAATAATTTCAAGAAGGGGCCACCTGGGTATTTCCTGAATGAACATCCAGGCTTTAGAAAGCTTTTAAATGACTCTGATATAAAGCAACTTTATCCAAACGCAGGTGATCAAAAGAGAAATGAAAGAGGAGAGAGCAAAAGAAGAAAAGGTACATAGAGAAATAATAGCAGAAGAAAAGTGCAAGCAAGGGGGATGCTTGTCATGGATGAAGAGGAAGCAGAAAGAGGAGCAGAGATCAAGAAGAAAGAGGTTCCTTTCTCATCTGAAACTAAAAGGGTGCTGAAGGAGAAGAGTGTTGAAATGGTGAAGAACAAAACATGGAAAATGAGGGAGGTGGGGGTAGTAGAGAAGATTACTCTGTAAACAAAGATTTGGTTTATTAATGCAAAATGGAAGAGAAAGGGCAGGTGGGGAATGTGGGATTGTATGGGTATCATAAAGGTTGGCTTTGTGGGTTGTGGTCCTATTTGCCTTGCTTCTCAACCACTTCAATTTGTTCTTTGTCATGGTGAAAGCAGGCCAACAGCTTAGCCTTCACGTGCTTGCCTTTGTCTTTGTGTTCTGAATTGTAGGGTAGGGCTCTTAAGGGCTTCTCCCTTTTGTTTTCAACTTTTAAATCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACTCTGTATTCAACAAAAATCTTAGACCACCTATTTTAAAAAATTTGACATTGT

mRNA sequence

TTAATTTAAATTTGAAAAAAATAGTGGGAATTTGGCAAAGCACATGCAAGAGGTATTTTAGTAGTAGTAGGGACAATGAAAAGTTTGAATGTCTGATAAAATTTGATAAGCTCAAAATTCCATTTCCATGGAGCAACCTACATTCATTTCTCACCGGCGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCCAAACTTAACCGCGACCCCACCATTTCCCGGCGATTCTCCGGCTCCTACATCAGAAGCTTTCGAGAAGACGCCAGGTCGTTTCGATCAAACATCACCAGCACCGCCTCCTCTCCCGGATACCCGTTCGGAGACGAAATTGACCCAGCTACGTATTCGTTTACTAACGCCATCAAGGCACTGCAAGCCAGGTCACTTAACAGTTGGGAATGCTTTTCTCTCGATGGGTTTACTTTAAATTCGAAGTGGAACGAGGCTGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCTATGGAGTGTTTGTCTGCAAAATCACTTAGTGGGAGGTCGTTTAGGAACTTAGCCAACAGAATTGCAGTGTCTGCTCCTTTAGTTTACTCAAATCATTCACAACAGATTCAAACAAAGCCATGTTCTATCACACAAGTAGTTCAGAAACTCCCAATTCCAGATAAGAAAGTGGATGCTAATGCTATGACTAGAGATGTGGGAACTCAAAGCACACCACCAAACGTTGGTTCATCTAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGATAGAGCATTAAAGAGATGCGAATTGGAAGAAAACTCTCCCAGTTCCAATTCTAAGGTTACTCCCGAAACAGAGGTGATCAAAAGAGAAATGAAAGAGGAGAGAGCAAAAGAAGAAAAGGTACATAGAGAAATAATAGCAGAAGAAAAGTGCAAGCAAGGGGGATGCTTGTCATGGATGAAGAGGAAGCAGAAAGAGGAGCAGAGATCAAGAAGAAAGAGGTTCCTTTCTCATCTGAAACTAAAAGGGTGCTGAAGGAGAAGAGTGTTGAAATGGTGAAGAACAAAACATGGAAAATGAGGGAGGTGGGGGTAGTAGAGAAGATTACTCTGTAAACAAAGATTTGGTTTATTAATGCAAAATGGAAGAGAAAGGGCAGGTGGGGAATGTGGGATTGTATGGGTATCATAAAGGTTGGCTTTGTGGGTTGTGGTCCTATTTGCCTTGCTTCTCAACCACTTCAATTTGTTCTTTGTCATGGTGAAAGCAGGCCAACAGCTTAGCCTTCACGTGCTTGCCTTTGTCTTTGTGTTCTGAATTGTAGGGTAGGGCTCTTAAGGGCTTCTCCCTTTTGTTTTCAACTTTTAAATCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACTCTGTATTCAACAAAAATCTTAGACCACCTATTTTAAAAAATTTGACATTGT

Coding sequence (CDS)

ATGGAGCAACCTACATTCATTTCTCACCGGCGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCGGCAAAGGCCAAACTTAACCGCGACCCCACCATTTCCCGGCGATTCTCCGGCTCCTACATCAGAAGCTTTCGAGAAGACGCCAGGTCGTTTCGATCAAACATCACCAGCACCGCCTCCTCTCCCGGATACCCGTTCGGAGACGAAATTGACCCAGCTACGTATTCGTTTACTAACGCCATCAAGGCACTGCAAGCCAGGTCACTTAACAGTTGGGAATGCTTTTCTCTCGATGGGTTTACTTTAAATTCGAAGTGGAACGAGGCTGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTTCCTATGGAGTGTTTGTCTGCAAAATCACTTAGTGGGAGGTCGTTTAGGAACTTAGCCAACAGAATTGCAGTGTCTGCTCCTTTAGTTTACTCAAATCATTCACAACAGATTCAAACAAAGCCATGTTCTATCACACAAGTAGTTCAGAAACTCCCAATTCCAGATAAGAAAGTGGATGCTAATGCTATGACTAGAGATGTGGGAACTCAAAGCACACCACCAAACGTTGGTTCATCTAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGATAGAGCATTAAAGAGATGCGAATTGGAAGAAAACTCTCCCAGTTCCAATTCTAAGGTTACTCCCGAAACAGAGGTGATCAAAAGAGAAATGAAAGAGGAGAGAGCAAAAGAAGAAAAGGTACATAGAGAAATAATAGCAGAAGAAAAGTGCAAGCAAGGGGGATGCTTGTCATGGATGAAGAGGAAGCAGAAAGAGGAGCAGAGATCAAGAAGAAAGAGGTTCCTTTCTCATCTGAAACTAAAAGGGTGCTGA

Protein sequence

MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNITSTASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPDKKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETEVIKREMKEERAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSRRKRFLSHLKLKGC

Homology

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BLAST of Cp4.1LG03g06310 vs. TrEMBL
Match: A0A0A0L6V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G259700 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 6.3e-148
Identity = 272/299 (90.97%), Postives = 283/299 (94.65%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNI---T 60
           MEQP FIS RRDEPEFSLREWAAKAK+ RDP  SRRFSGSYIRSFREDARSFRSNI   T
Sbjct: 1   MEQPPFISQRRDEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPD 180
           LSGEVPMECLSAKSLSGRSFRN  NRIA+SAPLVYSNHSQQ QTKPCSI QVVQKLPIP+
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 KKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETE 240
           K++DANA+TRDVGTQSTP NVGS SPSPASTPPIVDRALKRCELEE+SP+SNSK+TP TE
Sbjct: 181 KQLDANALTRDVGTQSTPTNVGSKSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 VIKREMKEERAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSRRKRFLSHLKLKGC 297
           VIKREMKEERAKEEKVH+EIIAEEK KQGGCLSWMK+KQKEEQRSRRKRFLSHLKLKGC
Sbjct: 241 VIKREMKEERAKEEKVHKEIIAEEKYKQGGCLSWMKKKQKEEQRSRRKRFLSHLKLKGC 299

[Close]

BLAST of Cp4.1LG03g06310 vs. TrEMBL
Match: A0A061EHB0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 1.2e-85
Identity = 191/308 (62.01%), Postives = 230/308 (74.68%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--S 60
           +EQ ++ S R DEPEF+LREW  KA+++R+ T SRR+S SYIRSFREDARSFRSNIT  S
Sbjct: 5   VEQSSYSSRRHDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNITISS 64

Query: 61  TASSPGYPFGDEIDPATYSFTNAIKALQARSLNS-WECFSLDGFTLNSKWNEAEKYICNP 120
           TASSPGY   DEIDP+TYSFT A+KALQAR++ S WEC S DGF LNSKWNEAEKYICNP
Sbjct: 65  TASSPGYSLKDEIDPSTYSFTTALKALQARTVCSGWECLSPDGFALNSKWNEAEKYICNP 124

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPC-SITQVVQKLPIP 180
           LSGEVPMECLSAK+LSGRSFRNL NRI +SAPLVYS HS  IQT P  ++ + V + P P
Sbjct: 125 LSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVYS-HSCHIQTNPSRTVPEDVAQFPTP 184

Query: 181 DKKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEE-NSPSSNSKVTPE 240
           +KK  A +MTRDVGTQSTPP++ S S SPASTP I++RALKRC  E  +SP++N+K   E
Sbjct: 185 EKK--AESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTNTKPRAE 244

Query: 241 TEVIKREMKEERAKEE----KVHREIIAEEKC---KQGGCLSWMKRKQKEEQRSRRKRFL 297
            +V   E+KE   +EE    K  R    E  C   +Q GCLSWM+R+Q+E+ +S RKR +
Sbjct: 245 EQV---EVKETGEREETIIDKAERRRKDELMCRCSRQPGCLSWMRRRQREKHKS-RKRSI 304

[Close]

BLAST of Cp4.1LG03g06310 vs. TrEMBL
Match: A0A061EIL5_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 8.3e-84
Identity = 191/313 (61.02%), Postives = 230/313 (73.48%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--S 60
           +EQ ++ S R DEPEF+LREW  KA+++R+ T SRR+S SYIRSFREDARSFRSNIT  S
Sbjct: 5   VEQSSYSSRRHDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNITISS 64

Query: 61  TASSPGYPFGDEIDPATYSFTNAIKALQARSLNS-WECFSLDGFTLNSKWNEAEKYICNP 120
           TASSPGY   DEIDP+TYSFT A+KALQAR++ S WEC S DGF LNSKWNEAEKYICNP
Sbjct: 65  TASSPGYSLKDEIDPSTYSFTTALKALQARTVCSGWECLSPDGFALNSKWNEAEKYICNP 124

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPC-SITQVVQKLPIP 180
           LSGEVPMECLSAK+LSGRSFRNL NRI +SAPLVYS HS  IQT P  ++ + V + P P
Sbjct: 125 LSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVYS-HSCHIQTNPSRTVPEDVAQFPTP 184

Query: 181 -----DKKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEE-NSPSSNS 240
                +KK  A +MTRDVGTQSTPP++ S S SPASTP I++RALKRC  E  +SP++N+
Sbjct: 185 VHLIAEKK--AESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTNT 244

Query: 241 KVTPETEVIKREMKEERAKEE----KVHREIIAEEKC---KQGGCLSWMKRKQKEEQRSR 297
           K   E +V   E+KE   +EE    K  R    E  C   +Q GCLSWM+R+Q+E+ +S 
Sbjct: 245 KPRAEEQV---EVKETGEREETIIDKAERRRKDELMCRCSRQPGCLSWMRRRQREKHKS- 304

[Close]

BLAST of Cp4.1LG03g06310 vs. TrEMBL
Match: U5FJR9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13910g PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 4.1e-83
Identity = 185/303 (61.06%), Postives = 220/303 (72.61%), Query Frame = 1


Query: 10  RRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--STASSPGYPF 69
           RR+EPEF+LREW  +A+++R+ T SRRFSGS IRSFREDARSFRSNIT  STASSPGY  
Sbjct: 15  RREEPEFNLREWEFRAQISREHTRSRRFSGSNIRSFREDARSFRSNITISSTASSPGYSI 74

Query: 70  GDEIDPATYSFTNAIKALQARS--LNSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPME 129
            +EIDP+TYSFT A+KALQARS   NSWEC S DGF L+SKWNEAEKYICNPLSGEVPME
Sbjct: 75  REEIDPSTYSFTTALKALQARSGYYNSWECSSPDGFALHSKWNEAEKYICNPLSGEVPME 134

Query: 130 CLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKP----CSITQVVQKLPIPDKKVD 189
           CLSAK+LSGRSFRNL NRI +SAPLVYSNHS+QIQTK      +   +V   PI + K++
Sbjct: 135 CLSAKTLSGRSFRNLTNRITMSAPLVYSNHSRQIQTKTTTSIAAHDDIVNHFPIKEDKME 194

Query: 190 ANAMTRDVGTQSTPPNV-GSSSPSPASTPPIVDRALKRCELE-ENSPSSNSKVTPETEVI 249
               TRDVGTQSTPP+V  SSSPSPASTP I++R  KRCE+E   +P+ NSK+  + +V 
Sbjct: 195 GMLNTRDVGTQSTPPDVSSSSSPSPASTPSIIER--KRCEVEGGGTPNCNSKLKAQGQV- 254

Query: 250 KREMKEERAKEEKVHREIIAEEK----------C---KQGGCLSWMKRKQKEEQRSRRKR 290
             ++KE R KEE    E   EE           C   KQGGCLSWM+++Q+E  + R   
Sbjct: 255 --QVKETRGKEESTENESTREESQNRKDEKMWMCSIRKQGGCLSWMRKRQRERHKPRNSN 312

[Close]

BLAST of Cp4.1LG03g06310 vs. TrEMBL
Match: K7MV79_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_18G281000 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.7e-81
Identity = 178/297 (59.93%), Postives = 220/297 (74.07%), Query Frame = 1


Query: 6   FISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--STASSP 65
           + S RRDE EF+LREWA KA+++R+ T SRR+SGSY+RSFRED RSFRSNIT  STASSP
Sbjct: 10  YSSRRRDESEFNLREWAVKARISREGTNSRRYSGSYMRSFREDTRSFRSNITISSTASSP 69

Query: 66  GYPFGDEIDPATYSFTNAIKALQARS-LNSWECFSLDGFTLNSKWNEAEKYICNPLSGEV 125
           GY   DEIDP+TYSFT A+KALQARS   SWEC S DGF LNSKWNEAE+YICNPLSGEV
Sbjct: 70  GYLLKDEIDPSTYSFTTALKALQARSSYYSWECLSPDGFALNSKWNEAERYICNPLSGEV 129

Query: 126 PMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPDKKVDA 185
           P+ECLSAK+LSGRSFRN  NRIA+SAPLVYS  S+ I TKP + TQ    L  P+ +   
Sbjct: 130 PLECLSAKTLSGRSFRNSINRIAMSAPLVYS--SKHIPTKPATFTQEEVALQFPNPEKKK 189

Query: 186 NAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETEVIKRE 245
             MTRDVGTQSTPP + S+SPSPASTP I +R+     L  +SP+SN+K   E EV +++
Sbjct: 190 EGMTRDVGTQSTPPYISSTSPSPASTPSITERSK---PLVSDSPNSNAKTKSEEEVEEKD 249

Query: 246 MK----EERAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSRRKR---FLSHLK 293
            +    +E  +E+KV R+   E+ CK  GC SWM++K+ E ++ R++R   FL+H K
Sbjct: 250 KETWETKETEREKKVWRK-QEEQLCKLSGCFSWMRKKKAEREKERQRRNNIFLTHFK 300

[Close]

BLAST of Cp4.1LG03g06310 vs. TAIR10
Match: AT5G16030.3 (AT5G16030.3 unknown protein)

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-53
Identity = 150/335 (44.78%), Postives = 197/335 (58.81%), Query Frame = 1


Query: 10  RRDEPEF-SLREWAAKAKLNRDPTISRRFSGSYIRSFREDAR--SFRS----NITSTASS 69
           R DE EF +LREW  +A+L R+   SRRFS SYI SFRED    SFR+    NI+STASS
Sbjct: 4   RGDEHEFMNLREWDRRARLIRENPSSRRFSASYIGSFREDHHKSSFRTTNFNNISSTASS 63

Query: 70  PGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICNPLSGE 129
           PGY   +EIDP+TYSFTNA+KALQA+++ N+ E  + +GF LNSKWNEAEKYICNPLSGE
Sbjct: 64  PGYTLKEEIDPSTYSFTNALKALQAKTMYNNREWLAQEGFALNSKWNEAEKYICNPLSGE 123

Query: 130 VPMECLSAKSLSGRSFRNLANRIAVSAPLVY-------SNHSQQIQTKPCSITQVVQKLP 189
           VPMECLSAK+LS RSFRNL+    +SAPL +       +N +Q       ++  + + L 
Sbjct: 124 VPMECLSAKTLSARSFRNLST---MSAPLHFPSPNPLMNNIAQNKPNNNPNVRVIHEDLY 183

Query: 190 IPDKKVDANA--------------MTRDVGTQSTPP-NVGSSSPSPASTPPIVDRALKRC 249
            PD ++ A                M RDVG QST   ++ S SPSPA TPPI++R+LKR 
Sbjct: 184 APDPELLALVNYGGVFLAEKKVVGMKRDVGIQSTTSVDLSSGSPSPAKTPPIMERSLKRH 243

Query: 250 ---------------------------ELEENSPSSNSKVTPETEVIKREMKEERAKEEK 284
                                      + EE    SN +   E E  K++M EE  KEE+
Sbjct: 244 VEADDWPVDINLKVKGQQQDVKLEEKEKEEEKQDMSNEEDEEEEEEEKQDMSEEDDKEEE 303

[Close]

BLAST of Cp4.1LG03g06310 vs. TAIR10
Match: AT3G02500.1 (AT3G02500.1 unknown protein)

HSP 1 Score: 182.2 bits (461), Expect = 4.7e-46
Identity = 125/288 (43.40%), Postives = 178/288 (61.81%), Query Frame = 1


Query: 10  RRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--STASSPGYPF 69
           R +E EF+LREWA +  L R+   SRRFS S IRSFRED +S  +N+T  STASSPGY  
Sbjct: 4   RGEELEFNLREWARQGHLTREDQSSRRFSASCIRSFREDHKSCTTNVTISSTASSPGYSL 63

Query: 70  GDEIDPATYSFTNAIKALQARSL--NSWECFSLDGFTLNSKWNEAEKYICNPLSGEVPME 129
            DEIDP+ YSF++A+KALQA+S+   +W+    +G  LNSKWNEAEKYICNPLSGEVP+E
Sbjct: 64  KDEIDPSNYSFSSALKALQAKSVYKKNWDWLKPEGVELNSKWNEAEKYICNPLSGEVPLE 123

Query: 130 CLSAKSLSGRSFRNLANRIAVSAPLVY--SNHSQQIQTKPCSITQVVQKLP-------IP 189
           CLS+K+L+ RSFRNL+ +    APL+   SN++  I        +++ + P       I 
Sbjct: 124 CLSSKTLNSRSFRNLSTK---HAPLMILPSNYNLNIPRTVNPKVRIIHEDPRSPDPVLIQ 183

Query: 190 DKKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNS-KVTPE 249
           DKKV  +   RDV   S   NV     S A T PI++R  KR    ++SP   + K+  +
Sbjct: 184 DKKVVGS--KRDV--VSAQGNV-----SAAKTTPIMERLTKRQVGADDSPVEYALKLKAQ 243

Query: 250 TEVIKREMKEERAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSR 284
            E +K E  E+    +++  E   ++K +  G  SW+++ Q++ ++S+
Sbjct: 244 QEDVKLEENEQNMMTKEIQEEKKEKKKRRGSGFSSWIRKMQRQPRKSK 279

[Close]

BLAST of Cp4.1LG03g06310 vs. NCBI nr
Match: gi|449455789|ref|XP_004145633.1| (PREDICTED: uncharacterized protein LOC101205687 [Cucumis sativus])

HSP 1 Score: 531.6 bits (1368), Expect = 9.0e-148
Identity = 272/299 (90.97%), Postives = 283/299 (94.65%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNI---T 60
           MEQP FIS RRDEPEFSLREWAAKAK+ RDP  SRRFSGSYIRSFREDARSFRSNI   T
Sbjct: 1   MEQPPFISQRRDEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPD 180
           LSGEVPMECLSAKSLSGRSFRN  NRIA+SAPLVYSNHSQQ QTKPCSI QVVQKLPIP+
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 KKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETE 240
           K++DANA+TRDVGTQSTP NVGS SPSPASTPPIVDRALKRCELEE+SP+SNSK+TP TE
Sbjct: 181 KQLDANALTRDVGTQSTPTNVGSKSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 VIKREMKEERAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSRRKRFLSHLKLKGC 297
           VIKREMKEERAKEEKVH+EIIAEEK KQGGCLSWMK+KQKEEQRSRRKRFLSHLKLKGC
Sbjct: 241 VIKREMKEERAKEEKVHKEIIAEEKYKQGGCLSWMKKKQKEEQRSRRKRFLSHLKLKGC 299

[Close]

BLAST of Cp4.1LG03g06310 vs. NCBI nr
Match: gi|659123255|ref|XP_008461568.1| (PREDICTED: uncharacterized protein LOC103500139 [Cucumis melo])

HSP 1 Score: 530.4 bits (1365), Expect = 2.0e-147
Identity = 272/299 (90.97%), Postives = 283/299 (94.65%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNI---T 60
           MEQP FIS RR EPEFSLREWAAKAK+ RDP  SRRFSGSYIRSFREDARSFRSNI   T
Sbjct: 1   MEQPPFISQRRGEPEFSLREWAAKAKITRDPATSRRFSGSYIRSFREDARSFRSNITTIT 60

Query: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120
           STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP
Sbjct: 61  STASSPGYPFGDEIDPATYSFTNAIKALQARSLNSWECFSLDGFTLNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSITQVVQKLPIPD 180
           LSGEVPMECLSAKSLSGRSFRN  NRIA+SAPLVYSNHSQQ QTKPCSI QVVQKLPIP+
Sbjct: 121 LSGEVPMECLSAKSLSGRSFRNFTNRIAISAPLVYSNHSQQTQTKPCSIAQVVQKLPIPE 180

Query: 181 KKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEENSPSSNSKVTPETE 240
           K+VDANA+TRDVGTQSTP NVGS+SPSPASTPPIVDRALKRCELEE+SP+SNSK+TP TE
Sbjct: 181 KQVDANALTRDVGTQSTPTNVGSNSPSPASTPPIVDRALKRCELEEDSPNSNSKITPVTE 240

Query: 241 VIKREMKEERAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSRRKRFLSHLKLKGC 297
           VIKREMKEERAKEEKVH+EIIAEEK KQGGCLSWMK+KQKEEQRSRRKRFLSHLKLKGC
Sbjct: 241 VIKREMKEERAKEEKVHKEIIAEEKYKQGGCLSWMKKKQKEEQRSRRKRFLSHLKLKGC 299

[Close]

BLAST of Cp4.1LG03g06310 vs. NCBI nr
Match: gi|1009127162|ref|XP_015880548.1| (PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba])

HSP 1 Score: 338.6 bits (867), Expect = 1.1e-89
Identity = 186/304 (61.18%), Postives = 237/304 (77.96%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--S 60
           ME+  + S RR+E EF+LREW AKA+++R+ T SRR+S SYIRSFREDARSFRS+IT  S
Sbjct: 1   MEKSPYTSRRREEAEFNLREWGAKARISRENTNSRRYSASYIRSFREDARSFRSSITISS 60

Query: 61  TASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICNP 120
           TASSPGY   DEIDP+TYSFT A++ALQARS+ NSWEC S DGF LNSKWNEAEKYICNP
Sbjct: 61  TASSPGYCLRDEIDPSTYSFTTALQALQARSVYNSWECLSPDGFALNSKWNEAEKYICNP 120

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCSIT----QVVQKL 180
           LSGEVPMECLSAK+LSGRSFRNL NRI +SAPL+Y +HS+  QT+P +       VV  +
Sbjct: 121 LSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLIYPSHSRHFQTRPPNPNTVHEDVVHPV 180

Query: 181 PIPDKKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEE-NSPSSNSKV 240
           PIP+KK+   +MTRDVGTQSTPP++ SSSPSPASTPPIV+R+LKR  LE  +SP+S +K+
Sbjct: 181 PIPEKKM--GSMTRDVGTQSTPPDLSSSSPSPASTPPIVERSLKRFGLENGDSPNSYAKL 240

Query: 241 TPETEVIKREMKEERAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSRRKRFLSHLK 297
             + EV   E +E+   + +  +E   +++  QGGCLSWM+++Q+E+ + R+K   + L+
Sbjct: 241 KSQQEVKMPETREKEETKREEGKEKDEQKQQSQGGCLSWMRKRQREKHKPRKKNIFA-LR 300

[Close]

BLAST of Cp4.1LG03g06310 vs. NCBI nr
Match: gi|590653052|ref|XP_007033315.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 324.7 bits (831), Expect = 1.7e-85
Identity = 191/308 (62.01%), Postives = 230/308 (74.68%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--S 60
           +EQ ++ S R DEPEF+LREW  KA+++R+ T SRR+S SYIRSFREDARSFRSNIT  S
Sbjct: 5   VEQSSYSSRRHDEPEFNLREWGLKARISRENTTSRRYSASYIRSFREDARSFRSNITISS 64

Query: 61  TASSPGYPFGDEIDPATYSFTNAIKALQARSLNS-WECFSLDGFTLNSKWNEAEKYICNP 120
           TASSPGY   DEIDP+TYSFT A+KALQAR++ S WEC S DGF LNSKWNEAEKYICNP
Sbjct: 65  TASSPGYSLKDEIDPSTYSFTTALKALQARTVCSGWECLSPDGFALNSKWNEAEKYICNP 124

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPC-SITQVVQKLPIP 180
           LSGEVPMECLSAK+LSGRSFRNL NRI +SAPLVYS HS  IQT P  ++ + V + P P
Sbjct: 125 LSGEVPMECLSAKTLSGRSFRNLTNRITMSAPLVYS-HSCHIQTNPSRTVPEDVAQFPTP 184

Query: 181 DKKVDANAMTRDVGTQSTPPNVGSSSPSPASTPPIVDRALKRCELEE-NSPSSNSKVTPE 240
           +KK  A +MTRDVGTQSTPP++ S S SPASTP I++RALKRC  E  +SP++N+K   E
Sbjct: 185 EKK--AESMTRDVGTQSTPPDLSSGSLSPASTPSILERALKRCGTENGDSPNTNTKPRAE 244

Query: 241 TEVIKREMKEERAKEE----KVHREIIAEEKC---KQGGCLSWMKRKQKEEQRSRRKRFL 297
            +V   E+KE   +EE    K  R    E  C   +Q GCLSWM+R+Q+E+ +S RKR +
Sbjct: 245 EQV---EVKETGEREETIIDKAERRRKDELMCRCSRQPGCLSWMRRRQREKHKS-RKRSI 304

[Close]

BLAST of Cp4.1LG03g06310 vs. NCBI nr
Match: gi|645248638|ref|XP_008230386.1| (PREDICTED: uncharacterized protein LOC103329666 [Prunus mume])

HSP 1 Score: 321.2 bits (822), Expect = 1.8e-84
Identity = 187/308 (60.71%), Postives = 232/308 (75.32%), Query Frame = 1


Query: 1   MEQPTFISHRRDEPEFSLREWAAKAKLNRDPTISRRFSGSYIRSFREDARSFRSNIT--S 60
           ME+  + S RRDE EFSLREWA KA+++R+ T SRRFS SY+RSFRED RSFRSNIT  S
Sbjct: 5   MEESPYGSRRRDETEFSLREWAVKARISRENTNSRRFSASYVRSFREDTRSFRSNITISS 64

Query: 61  TASSPGYPFGDEIDPATYSFTNAIKALQARSL-NSWECFSLDGFTLNSKWNEAEKYICNP 120
           TASSPGY   DEIDPATYSF  A+KALQARS  +SWE  S DGF LNSKWNEAEKYICNP
Sbjct: 65  TASSPGYNLRDEIDPATYSFPTALKALQARSAYHSWESLSPDGFALNSKWNEAEKYICNP 124

Query: 121 LSGEVPMECLSAKSLSGRSFRNLANRIAVSAPLVYSNHSQQIQTKPCS---ITQVVQKLP 180
           LSG+VPMECLSAK+LSGRSFRN+ NRI +SAPLVYS+HS+ I  KP S       V++ P
Sbjct: 125 LSGQVPMECLSAKTLSGRSFRNITNRITMSAPLVYSSHSRPIHAKPSSNPAKEDFVRQFP 184

Query: 181 IPDKKVDANAMTRDVGTQSTPPNVGSSS-PSPASTPPIVDRALKRCELEENSPSSNSKVT 240
           IP+KK +    TRDVGTQSTPP++ SSS PS ASTP I++R+L R  + + SP SN+K+ 
Sbjct: 185 IPEKKTEGT--TRDVGTQSTPPDMSSSSPPSSASTPSIIERSLNRFRVGD-SPKSNAKLK 244

Query: 241 PETEVIKREMKEE----RAKEEKVHREIIAEEKCKQGGCLSWMKRKQKEEQRSRRKR-FL 297
            + EV  ++ +E+    R KEE+  R+   E++ +QGGCLSWM+++ +E+ + R+K  FL
Sbjct: 245 SDEEVEVKDTREQEETKREKEERKKRD--DEQQRRQGGCLSWMRKRYREKHKPRKKNIFL 304

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g06310 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g06310 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6V9_CUCSA	6.3e-148	90.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G259700 PE=4 SV=1	[more]
A0A061EHB0_THECC	1.2e-85	62.01	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1	[more]
A0A061EIL5_THECC	8.3e-84	61.02	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1	[more]
U5FJR9_POPTR	4.1e-83	61.06	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13910g PE=4 SV=1	[more]
K7MV79_SOYBN	1.7e-81	59.93	Uncharacterized protein OS=Glycine max GN=GLYMA_18G281000 PE=4 SV=1	[more]

BLAST of Cp4.1LG03g06310 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16030.3	5.2e-53	44.78	unknown protein	[more]
AT3G02500.1	4.7e-46	43.40	unknown protein	[more]

BLAST of Cp4.1LG03g06310 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455789\|ref\|XP_004145633.1\|	9.0e-148	90.97	PREDICTED: uncharacterized protein LOC101205687 [Cucumis sativus]	[more]
gi\|659123255\|ref\|XP_008461568.1\|	2.0e-147	90.97	PREDICTED: uncharacterized protein LOC103500139 [Cucumis melo]	[more]
gi\|1009127162\|ref\|XP_015880548.1\|	1.1e-89	61.18	PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba]	[more]
gi\|590653052\|ref\|XP_007033315.1\|	1.7e-85	62.01	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|645248638\|ref\|XP_008230386.1\|	1.8e-84	60.71	PREDICTED: uncharacterized protein LOC103329666 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g06310.1	Cp4.1LG03g06310.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 240..260 scor
None	No IPR available	PANTHER	PTHR36748	FAMILY NOT NAMED	coord: 1..295 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g06310	Cucsa.031680	Cucumber (Gy14) v1	cgycpeB0009
Cp4.1LG03g06310	CmaCh14G007950	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g06310	CmaCh01G003960	Cucurbita maxima (Rimu)	cmacpeB494
Cp4.1LG03g06310	CmoCh01G004200	Cucurbita moschata (Rifu)	cmocpeB453
Cp4.1LG03g06310	CmoCh14G008110	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g06310	Cla007116	Watermelon (97103) v1	cpewmB615
Cp4.1LG03g06310	Csa3G259700	Cucumber (Chinese Long) v2	cpecuB600
Cp4.1LG03g06310	MELO3C023762	Melon (DHL92) v3.5.1	cpemeB586
Cp4.1LG03g06310	ClCG05G012070	Watermelon (Charleston Gray)	cpewcgB560
Cp4.1LG03g06310	CSPI03G20390	Wild cucumber (PI 183967)	cpecpiB602
Cp4.1LG03g06310	Lsi05G004030	Bottle gourd (USVL1VR-Ls)	cpelsiB511
Cp4.1LG03g06310	MELO3C023762.2	Melon (DHL92) v3.6.1	cpemedB690
Cp4.1LG03g06310	CsaV3_3G020330	Cucumber (Chinese Long) v3	cpecucB0749
Cp4.1LG03g06310	Bhi01G001439	Wax gourd	cpewgoB0773
Cp4.1LG03g06310	CsGy3G020130	Cucumber (Gy14) v2	cgybcpeB397
Cp4.1LG03g06310	Carg07489	Silver-seed gourd	carcpeB1073
Cp4.1LG03g06310	Carg22286	Silver-seed gourd	carcpeB0673

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g06310	Cp4.1LG02g17070	Cucurbita pepo (Zucchini)	cpecpeB449

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g06310	Melon (DHL92) v3.6.1	cpemedB694