CSPI03G20390 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTCATTTCAATTTGAAAAACTGTGTAAGAGGAAATAAAAAGAGAGAGAGAGAGAGAGAAGAAAAAGAAAGTGCGTATTTGCCAAAGCTAAAGCAAGAGCCATTTTTAGTAGCAGTAGGGACATTAAAAAAAAGTTTGAAGGTCTGGTAAATTTGTTAAGCTCAAAAATTCCATTTCCATGGAGCAACCCCCATTCATTTCTCAACGACGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCTGCCAAGGCCAAAATTACCCGCGACCCCGCCACTTCCCGGCGATTCTCTGGTTCTTACATCAGAAGCTTCCGAGAAGATGCTAGATCGTTCCGATCAAACATCACTACCATCACTAGCACCGCCTCCTCTCCCGGATACCCTTTTGGAGGTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTCTTTGTGGAATTTTGATTCCCACCCATGAATTCTTCTCTTCTTTAACTCTTCGGGGTTTTGTTTTGTAGATGAAATTGACCCAGCTACTTATTCCTTCACTAATGCCATCAAGGGTGAGTTTATTAAAAATGTGTTTGAAAGAATTCGCTGGTTTTGTGGTTGTTTTTTGTAACTGGGTGCTGCTTCTTATGCAGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACTTTGAATTCGAAATGGAACGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTGCCCATGGAGTGTTTGTCTGCAAAATCACTTAGTGGGAGGTCGTTTAGGAACTTTACAAACAGAATTGCTATATCTGCACCTTTAGTTTACTCCAATCATTCACAACAAACTCAAACAAAGCCATGTTCTATTGCACAAGTAGTTCAGAAACTCCCAATTCCAGGTCAAATCATCTGTCTTCTTCTTTACACCATCGAGTTTAGTCGAGTTGGGGGTTGGATGATTTTGAATTCTCTGTTGTGATTTTCAGAGAAGCAACTGGATGCCAATGCTTTGACTAGAGATGTGGGAACTCAAAGCACACCAACAAACGTTGGTTCAAAAAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGACAGAGCTTTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAATTACTCCCGTGACAGAGGTATGCCATTTCCAATCTTTCATAGGCTAAATCTTGTATTATATTTGTCTCAATGGAATGTCTGAAAGTTCAATGCCGAGGTAATTGGTAGTTGGGATTGGGAATTGTTAAACCACCCCTAGCCTAAGCCAATCCCCACACAATCCAAAAAATTAAGTGGATAGGTTATGAAAGAATAGAATATTCTAAGTACTTATTTTTTAACACACTGATAGGTTCAGAAATTGGAACAGTACCCAATGAGTTTGAATTATTATTAATCGGAGAAACAATCACATTCAGGGAGTTTTATATGGTACTATTTAAATCACTATTCATCCCACAAAACTGAATTAGTGGTGATTTTACAGGAGAATTGATGTCTCTCATTTGTTTCAACTTTCGATGAATTTGGATATGATTCAGTCTTAATGAACATTTAAAACAACTTTATGCTGGTGTTCCTAACGTATGATCTGCCTTTCTTCATAGCTTGAGGAGAAGAGCAGTTGATGCAAAATTTAAATGTCAACCTAAGCATCACATAATAGAATCTAAGAAAAGAAAGAAACAAGTGGAGCATAAGTGAAATTCAGCTTTCTCAGACACAAAAGCTTTTTCTTCAATCTATTTCTATCTATCCCAAACAGCCCCACTAAGGATGAGGCAACTAAATCAAGATTGTCCCGATACATGTCATAAAACAGAGTACTATACCCATCCAAGGTGGGGGACTGTTTTTGTTAGCCACAAGTTGTTACAGTTTTGGTCCCTGTTTGATTTTTTTCCCCTCATATTGGCCTACTTTCCAGCTCATATAGTTTTGATTGTCTCTATATTGTAGAAACATATTTTTCTAGAAATTAAAGTGATAATATTCAGATGTCAGAAAACCCTGCCTTGATTCGATTCTTGGTATTGAGAGAGACAGTGTCTCAATGCATGAATTACTGCATAAATTTCAAATTTCCCTCCTTGAACTCTGTTTTTGTTTTTGTTTTTTTTTTTTTTTTCCATTCCTCTCTTTCTATTTCATTTCCTTTCCTTTTACCTTAGTGGAGCCCATCAAGATTTTCTTTTACATATATATTCCTTTAATATAATAAAAGAAATCTCCTCTCTATATATATTTCTTGAGATTCTCATTAAAAAGGCAGTTGCAGCTCTTTTTTCCCCTTCTTTCTGAAAGTTGTGGCCTTGTATACTCCCTTTTTAGTCAATTGAGCACAAATAATAGGTTGATGAATCATTGCTTCTGCCATTTACTACTGAACAGAATCCTCAAGCATCGAAACCATCAAGAAATGAGCAGTGTTAATTTTGTTTTTTCTACTAAGATCAAGGAAACTTTGTTGAAAACTCCAACTGCCCCTGGACAAATTAGAGGTTAATAATCTATCATTTCTTCTGTAATTCCCAAAATATTATTACATAAACGTATGTGGAAAAGTTCCAAAAAGGTGCAATCTGAATTCTGACCAAGTTAAAAAGGGAGCAACCTGGGTATTTCCTGAATGAACATCCAGATTTTACAAAGCCTTTTATCTGGCACTGATATAATGTAACGTTATCAAAATGCAGGTGATAAAAAGAGAGATGAAAGAAGAGAGAGCAAAAGAAGAAAAGGTACATAAAGAAATAATAGCAGAAGAAAAGTACAAGCAAGGGGGATGCTTATCATGGATGAAGAAGAAGCAGAAAGAGGAACAAAGATCAAGAAGAAAGAGGTTCCTGTCTCATCTAAAACTAAAAGGGTGCTAAAAGAGAGAGTGTTGAAATGGAGAAAGAACAAAACATGGAAAATAAAGGAGTCTATAAGAAGAGATTTGGTTAATTAATACAAAATGGAAGAAAAAGGGCATATGGGAATGTGGTATTTGTATGAAGATGAGGGGTATGAGTGTTTGTGGTCCTATTTGCCTTTGCCTCTTAATCACTTCAATTTGTTCTTAGTGATGGTGAAAGTAAACCAACAGCTTAGGTTTCACGTGCAGGCTTTTGTCCTTGTTTTCTGAATAGTAGGGTAAGGCTCTAAAGAGTCTCCTCCTTTAGTTTTCAACTTTTTAAAAATATTTCTCTCTCATTGTTGTTGTTATTATTACTGACCTTTTGTTGTAAAATTTTTATACTGTATTTAACAAAAACCTTAGACCACCCTAATTTATATTATTTTTCTGAATTTCATATTACATT ATGGAGCAACCCCCATTCATTTCTCAACGACGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCTGCCAAGGCCAAAATTACCCGCGACCCCGCCACTTCCCGGCGATTCTCTGGTTCTTACATCAGAAGCTTCCGAGAAGATGCTAGATCGTTCCGATCAAACATCACTACCATCACTAGCACCGCCTCCTCTCCCGGATACCCTTTTGGAGATGAAATTGACCCAGCTACTTATTCCTTCACTAATGCCATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACTTTGAATTCGAAATGGAACGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTGCCCATGGAGTGTTTGTCTGCAAAATCACTTAGTGGGAGGTCGTTTAGGAACTTTACAAACAGAATTGCTATATCTGCACCTTTAGTTTACTCCAATCATTCACAACAAACTCAAACAAAGCCATGTTCTATTGCACAAGTAGTTCAGAAACTCCCAATTCCAGAGAAGCAACTGGATGCCAATGCTTTGACTAGAGATGTGGGAACTCAAAGCACACCAACAAACGTTGGTTCAAAAAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGACAGAGCTTTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAATTACTCCCGTGACAGAGGTGATAAAAAGAGAGATGAAAGAAGAGAGAGCAAAAGAAGAAAAGGTACATAAAGAAATAATAGCAGAAGAAAAGTACAAGCAAGGGGGATGCTTATCATGGATGAAGAAGAAGCAGAAAGAGGAACAAAGATCAAGAAGAAAGAGGTTCCTGTCTCATCTAAAACTAAAAGGGTGCTAA ATGGAGCAACCCCCATTCATTTCTCAACGACGAGATGAACCGGAGTTCAGCCTCCGTGAATGGGCTGCCAAGGCCAAAATTACCCGCGACCCCGCCACTTCCCGGCGATTCTCTGGTTCTTACATCAGAAGCTTCCGAGAAGATGCTAGATCGTTCCGATCAAACATCACTACCATCACTAGCACCGCCTCCTCTCCCGGATACCCTTTTGGAGATGAAATTGACCCAGCTACTTATTCCTTCACTAATGCCATCAAGGCACTGCAAGCCAGGTCGCTTAACAGTTGGGAATGCTTTTCTCTTGATGGGTTTACTTTGAATTCGAAATGGAACGAAGCCGAGAAGTATATATGTAATCCACTTTCTGGGGAAGTGCCCATGGAGTGTTTGTCTGCAAAATCACTTAGTGGGAGGTCGTTTAGGAACTTTACAAACAGAATTGCTATATCTGCACCTTTAGTTTACTCCAATCATTCACAACAAACTCAAACAAAGCCATGTTCTATTGCACAAGTAGTTCAGAAACTCCCAATTCCAGAGAAGCAACTGGATGCCAATGCTTTGACTAGAGATGTGGGAACTCAAAGCACACCAACAAACGTTGGTTCAAAAAGTCCTAGTCCTGCTTCCACGCCTCCCATCGTGGACAGAGCTTTAAAGAGATGCGAATTAGAAGAAGACTCGCCCAATTCCAATTCTAAAATTACTCCCGTGACAGAGGTGATAAAAAGAGAGATGAAAGAAGAGAGAGCAAAAGAAGAAAAGGTACATAAAGAAATAATAGCAGAAGAAAAGTACAAGCAAGGGGGATGCTTATCATGGATGAAGAAGAAGCAGAAAGAGGAACAAAGATCAAGAAGAAAGAGGTTCCTGTCTCATCTAAAACTAAAAGGGTGCTAA
BLAST of CSPI03G20390 vs. TrEMBL
Match: A0A0A0L6V9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G259700 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 6.3e-164 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1
BLAST of CSPI03G20390 vs. TrEMBL
Match: U5FJR9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s13910g PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 2.2e-84 Identity = 191/313 (61.02%), Postives = 224/313 (71.57%), Query Frame = 1
BLAST of CSPI03G20390 vs. TrEMBL
Match: A0A061EHB0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 2.2e-84 Identity = 186/306 (60.78%), Postives = 227/306 (74.18%), Query Frame = 1
BLAST of CSPI03G20390 vs. TrEMBL
Match: A0A067K9Y6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12963 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 7.1e-83 Identity = 191/329 (58.05%), Postives = 230/329 (69.91%), Query Frame = 1
BLAST of CSPI03G20390 vs. TrEMBL
Match: A0A061EIL5_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_019503 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 1.6e-82 Identity = 184/309 (59.55%), Postives = 225/309 (72.82%), Query Frame = 1
BLAST of CSPI03G20390 vs. TAIR10
Match: AT5G16030.3 (AT5G16030.3 unknown protein) HSP 1 Score: 205.3 bits (521), Expect = 5.3e-53 Identity = 146/333 (43.84%), Postives = 201/333 (60.36%), Query Frame = 1
BLAST of CSPI03G20390 vs. TAIR10
Match: AT3G02500.1 (AT3G02500.1 unknown protein) HSP 1 Score: 186.8 bits (473), Expect = 1.9e-47 Identity = 120/282 (42.55%), Postives = 172/282 (60.99%), Query Frame = 1
BLAST of CSPI03G20390 vs. NCBI nr
Match: gi|449455789|ref|XP_004145633.1| (PREDICTED: uncharacterized protein LOC101205687 [Cucumis sativus]) HSP 1 Score: 584.7 bits (1506), Expect = 9.1e-164 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 1
BLAST of CSPI03G20390 vs. NCBI nr
Match: gi|659123255|ref|XP_008461568.1| (PREDICTED: uncharacterized protein LOC103500139 [Cucumis melo]) HSP 1 Score: 578.9 bits (1491), Expect = 5.0e-162 Identity = 296/299 (99.00%), Postives = 297/299 (99.33%), Query Frame = 1
BLAST of CSPI03G20390 vs. NCBI nr
Match: gi|1009127162|ref|XP_015880548.1| (PREDICTED: uncharacterized protein LOC107416553 [Ziziphus jujuba]) HSP 1 Score: 344.7 bits (883), Expect = 1.6e-91 Identity = 189/305 (61.97%), Postives = 237/305 (77.70%), Query Frame = 1
BLAST of CSPI03G20390 vs. NCBI nr
Match: gi|645248638|ref|XP_008230386.1| (PREDICTED: uncharacterized protein LOC103329666 [Prunus mume]) HSP 1 Score: 323.2 bits (827), Expect = 4.9e-85 Identity = 187/307 (60.91%), Postives = 230/307 (74.92%), Query Frame = 1
BLAST of CSPI03G20390 vs. NCBI nr
Match: gi|743820688|ref|XP_011021213.1| (PREDICTED: uncharacterized protein LOC105123354 isoform X1 [Populus euphratica]) HSP 1 Score: 322.4 bits (825), Expect = 8.4e-85 Identity = 192/314 (61.15%), Postives = 224/314 (71.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |