Lsi05G002940 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Heavy metal transport/detoxification superfamily protein
Location	chr05 : 3751632 .. 3753238 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAGAATCAATCCCATTTGTTGAAGGTCGAGGTTAGTCGCGGTTGGCAAGAAAATTGACGATACTATTATGTTCATTTTCGCTCCATTTGATAACCATTTTATTTTTTTTTTCTATTTTTTAAAACAAAAAACAAAATGGTTATCGGAAGAAAAACCTTTTTCATTTGTTAATATTGCTGGTCACACATTGTTTTAACAGACACATGTTCTTAAAGTACACATGAATTGTCAAGGTTGCCTGCAGAGAGTAAGAAAACTTATCAAAAGGATTGAAGGTAAACAACAATGGCTTCCTTTTATTTATATATATAAAAGTCCATTTCATGTCAAAACGGATGCTTTCATTTTTTTTAATGTGTATATTGTAGGTGGACTTTAGGAGTCCCTTTTTTTTATAAAGATTATCCTTGTCTTTGTTTATGTCTCAAATTGGAACGAATTACCATAATTTGTCTCCGCCTACGGATCAGGCGACATTTTTTACAAATTTTCCGAATGGAAGCCTTTATTTTCATATTTGTCATTCCTTACCTTAATTCCAAATCTACTTATCGGAAGAAAATAAGTTTCTTGAAATTTTCTATTTCGAATTGTATCCTTACAAAAAAAAGAATATTGCACGTGAAAAGACTACTTTACACAATCATTCGAATCTTTGTTTCGTAGTCTCTAAATTATACGTCCTTTGGTTTTCTTTTTAAAAATCGTTTACTAAGAAGTATGGATACTTTAATTTGATGGGAGTTTTTATAGATGGTTACTTTTGTTTTTAACTTCAAAAGAATTTGGGAATGCATCTTTTTGTTCCTATGTTTCACTTATTTTCTTCTACATTTTTATTTTTTTAAAAAAATAAATAATTGTATTCTTTTGGTTTATATATATAGATTACCATAAACTTAATCCTTTATTTTTTTAAAAAAATAAAAACTCTTATTTATGTAAAATGAGCCTCTTGTGTTTCAAAATAAATAAAAAAAATATTGATTTCATAAGAACATCTTCCATTAGCTAACTATTATTATTGATATTCAACATGCATGCAAGTACATGATGCCAATATATAGCCCTCCTCATTTCTTCTTATATGGAATTTAGGTGTTTATAAGGTAAACATAAATTTTGAACAACAAAAGGTCACAGTCACAGGCAATGTGGATTCAACCACTTTGATAAAGAAGCTTCTCAAATTAGGTAAGCATGCTGAACTTTGGTCTTCAACTTCCAAACAAGATGAAGGTGAAGAAGCAAACCTAAGAAAAAACATACACAACCAAATGAAAGATGCAGCAGATCCATCCTATAGCTTCCAAAATCAGTATATGTTTCCAATATTTGATAGAGAATTCAATAATCGGTTGCTATTTGAACATTACCTCGATCAAGGAAGTGGCATGTCGAGCAGTTTCCGGTATCATCCAGTCACTACAACTGCAGCACAGAAGGCAAGAGCTCACTGTGATAATGAAAAGCTAGGAAACCAGATGATATCCATGGCTCATAATGTAGGTATTCAAGGCTATCAGTTCGACGGAGTTCCAGATGATGCACATGTTCGAGACTATCGATTTGGCATCTTTCCAGATCTCCCTTATGCTTGA

mRNA sequence

ATGTCAAAGAATCAATCCCATTTGTTGAAGGTCGAGGTTAGTCGCGGTGTTTATAAGGTAAACATAAATTTTGAACAACAAAAGGTCACAGTCACAGGCAATGTGGATTCAACCACTTTGATAAAGAAGCTTCTCAAATTAGGTAAGCATGCTGAACTTTGGTCTTCAACTTCCAAACAAGATGAAGGTGAAGAAGCAAACCTAAGAAAAAACATACACAACCAAATGAAAGATGCAGCAGATCCATCCTATAGCTTCCAAAATCAGTATATGTTTCCAATATTTGATAGAGAATTCAATAATCGGTTGCTATTTGAACATTACCTCGATCAAGGAAGTGGCATGTCGAGCAGTTTCCGGTATCATCCAGTCACTACAACTGCAGCACAGAAGGCAAGAGCTCACTGTGATAATGAAAAGCTAGGAAACCAGATGATATCCATGGCTCATAATGTAGGTATTCAAGGCTATCAGTTCGACGGAGTTCCAGATGATGCACATGTTCGAGACTATCGATTTGGCATCTTTCCAGATCTCCCTTATGCTTGA

Coding sequence (CDS)

ATGTCAAAGAATCAATCCCATTTGTTGAAGGTCGAGGTTAGTCGCGGTGTTTATAAGGTAAACATAAATTTTGAACAACAAAAGGTCACAGTCACAGGCAATGTGGATTCAACCACTTTGATAAAGAAGCTTCTCAAATTAGGTAAGCATGCTGAACTTTGGTCTTCAACTTCCAAACAAGATGAAGGTGAAGAAGCAAACCTAAGAAAAAACATACACAACCAAATGAAAGATGCAGCAGATCCATCCTATAGCTTCCAAAATCAGTATATGTTTCCAATATTTGATAGAGAATTCAATAATCGGTTGCTATTTGAACATTACCTCGATCAAGGAAGTGGCATGTCGAGCAGTTTCCGGTATCATCCAGTCACTACAACTGCAGCACAGAAGGCAAGAGCTCACTGTGATAATGAAAAGCTAGGAAACCAGATGATATCCATGGCTCATAATGTAGGTATTCAAGGCTATCAGTTCGACGGAGTTCCAGATGATGCACATGTTCGAGACTATCGATTTGGCATCTTTCCAGATCTCCCTTATGCTTGA

Protein sequence

MSKNQSHLLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQFDGVPDDAHVRDYRFGIFPDLPYA

Homology

[Close]

BLAST of Lsi05G002940 vs. TrEMBL
Match: A0A0A0L6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185130 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.0e-72
Identity = 147/204 (72.06%), Postives = 156/204 (76.47%), Query Frame = 1


Query: 1   MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDST 60
           MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST
Sbjct: 1   MSKNPSHFLKVETRVLKVHVDCQGCLQRVRKLLNRIEGVYKIDINCEQQKVTVTGNVDST 60

Query: 61  TLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKDAADPSYSFQNQYMFPIFDRE 120
            LIKKL KLGKHAELW STSK  EGEE+NLRK I NQMKDA DP Y+FQNQ+M PI +RE
Sbjct: 61  ILIKKLKKLGKHAELWPSTSKHGEGEESNLRKYIDNQMKDATDPYYTFQNQHMLPILNRE 120

Query: 121 FNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQ 180
           FNNR LFE YLDQ SGMS+SFRYHPVTTTAAQKARA  DNEKLGNQMISMAHNVGIQ +Q
Sbjct: 121 FNNRSLFERYLDQESGMSNSFRYHPVTTTAAQKARAVYDNEKLGNQMISMAHNVGIQDFQ 180

Query: 181 FDGVPDDAHVRDYRFGIFPDLPYA 183
           FDGVPD+  VRDYRFGIFPD PYA
Sbjct: 181 FDGVPDNTCVRDYRFGIFPDFPYA 204

[Close]

BLAST of Lsi05G002940 vs. TrEMBL
Match: B9HW82_POPTR (Heavy-metal-associated domain-containing family protein OS=Populus trichocarpa GN=POPTR_0010s12450g PE=4 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 1


Query: 3   KNQSHLLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDE 62
           K + HL ++E   GVY+VNI+ EQQKVTV+G VD+ TLIKKL++ GKHAE+WS  S Q +
Sbjct: 29  KVKKHLQRIE---GVYQVNIDAEQQKVTVSGTVDTATLIKKLVRAGKHAEVWSQKSNQKQ 88

Query: 63  GEEA-NLRKNIHNQMKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGM 116
                   K+  +Q +       +F+NQ  FP+F  E ++  L +   D G  +
Sbjct: 89  NNNCIKDDKSNKSQKQGLVKGLEAFKNQQKFPVFSSEEDDDYLDDEEDDDGDDL 139

[Close]

BLAST of Lsi05G002940 vs. TrEMBL
Match: M5XDU3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007015mg PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11
Identity = 48/108 (44.44%), Postives = 63/108 (58.33%), Query Frame = 1


Query: 16  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANL---RKNI 75
           GVY+VNI+ +QQKVTV+GNVDS TLIKKL + GKHAELWS  S Q + ++ N     KN 
Sbjct: 39  GVYQVNIDADQQKVTVSGNVDSATLIKKLTRAGKHAELWSQKSNQSQKQKNNCIKDDKNN 98

Query: 76  HNQMKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFR 121
             Q +       +F+NQ  FP F  E ++    E++ D        FR
Sbjct: 99  KGQRQGIIKNLEAFKNQQKFPSFSSEEDD----EYFDDDEEDEEDEFR 142

[Close]

BLAST of Lsi05G002940 vs. TrEMBL
Match: F6HFJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04710 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-11
Identity = 43/86 (50.00%), Postives = 56/86 (65.12%), Query Frame = 1


Query: 16  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANL---RKNI 75
           GVY VNI+ EQQ+VTV+G+VDS TLIKKL+K GKHAELWS  S Q++ ++ N     KN 
Sbjct: 39  GVYTVNIDAEQQRVTVSGSVDSGTLIKKLVKAGKHAELWSQKSNQNQKQKTNCIKDDKNN 98

Query: 76  HNQMKDAADPSYSFQNQYMFPIFDRE 99
             Q +       +F+ Q  FP+F  E
Sbjct: 99  KGQKQGLIKGLEAFKTQQKFPVFSSE 124

[Close]

BLAST of Lsi05G002940 vs. TrEMBL
Match: A0A067FBP2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015975mg PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.8e-11
Identity = 57/152 (37.50%), Postives = 75/152 (49.34%), Query Frame = 1


Query: 16  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQ 75
           GVY+VNI+ EQQKVTV+G+VDS TLIKKL++ GKHAELWS  S Q++ ++ N  K+  N 
Sbjct: 39  GVYQVNIDAEQQKVTVSGSVDSATLIKKLVRAGKHAELWSQKSNQNQNQKNNCIKDDKNN 98

Query: 76  MKDAADPSYS----FQNQYMFPIFDREFNNRLL---FEHYLDQGS-------GMSSSFRY 135
            K             +NQ  FP F  E ++       E Y D+ S       G     R 
Sbjct: 99  NKGQKQGLMKGFEPLKNQQKFPTFISEDDDDYFDDDEEDYEDELSFLKANQLGQLGLLRQ 158

Query: 136 HPVTTTAAQKARAHCDNEKLGNQMISMAHNVG 154
             +    A+KA          N    M +NVG
Sbjct: 159 QAMDANNAKKAVGAMAAAAASNSNNKMNNNVG 190

[Close]

BLAST of Lsi05G002940 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09
Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 1


Query: 16  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRK 71
           GVY  NI+ +QQKVTV GNV+   LIKK++K G+HAELW ++ + +   + N +K
Sbjct: 56  GVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAELWPTSMENNINNDCNYQK 110

[Close]

BLAST of Lsi05G002940 vs. TAIR10
Match: AT1G23000.1 (AT1G23000.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 58.9 bits (141), Expect = 3.7e-09
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 1


Query: 16 GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHN 75
          GV  V I  E QKVTV+G+VDS TLI KL+K GKHAELWS    Q++ ++      I N
Sbjct: 39 GVCHVKIEAEHQKVTVSGSVDSATLINKLVKAGKHAELWSPNPNQNQPQKPKTNDFIKN 97

[Close]

BLAST of Lsi05G002940 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.5e-07
Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1


Query: 8  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEAN 67
          L K+E   GV+   I+ E  KVTV+GNVD + LIKKLLK GKHAE+W +  K       N
Sbjct: 31 LQKIE---GVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEIWGA-PKGGSNNNQN 90

Query: 68 LRKNIHNQMK 78
           + N+ NQ K
Sbjct: 91 -QPNLANQFK 95

[Close]

BLAST of Lsi05G002940 vs. TAIR10
Match: AT3G06130.1 (AT3G06130.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 1.0e-06
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1


Query: 8  LLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEAN 67
          L K+E   GV+   I+ EQ KVTV+G+VD + LIKKL K GKHAE+W +    +   ++ 
Sbjct: 31 LQKIE---GVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHAEIWGAPKGNNNPNQSQ 90

Query: 68 LRKNIHNQMKD 79
          +         D
Sbjct: 91 MANQFKGMQID 98

[Close]

BLAST of Lsi05G002940 vs. TAIR10
Match: AT3G05220.1 (AT3G05220.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 1


Query: 3  KNQSHLLKVEVSRGVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAEL 54
          K +  L K+E   GVY V  + EQ +VTVTGN+D   L+KKL K GKHAE+
Sbjct: 26 KVKKQLQKIE---GVYSVKADVEQGRVTVTGNIDPALLVKKLSKSGKHAEI 73

[Close]

BLAST of Lsi05G002940 vs. NCBI nr
Match: gi|700202300|gb|KGN57433.1| (hypothetical protein Csa_3G185130 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 2.9e-72
Identity = 147/204 (72.06%), Postives = 156/204 (76.47%), Query Frame = 1


Query: 1   MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDST 60
           MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST
Sbjct: 1   MSKNPSHFLKVETRVLKVHVDCQGCLQRVRKLLNRIEGVYKIDINCEQQKVTVTGNVDST 60

Query: 61  TLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKDAADPSYSFQNQYMFPIFDRE 120
            LIKKL KLGKHAELW STSK  EGEE+NLRK I NQMKDA DP Y+FQNQ+M PI +RE
Sbjct: 61  ILIKKLKKLGKHAELWPSTSKHGEGEESNLRKYIDNQMKDATDPYYTFQNQHMLPILNRE 120

Query: 121 FNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQ 180
           FNNR LFE YLDQ SGMS+SFRYHPVTTTAAQKARA  DNEKLGNQMISMAHNVGIQ +Q
Sbjct: 121 FNNRSLFERYLDQESGMSNSFRYHPVTTTAAQKARAVYDNEKLGNQMISMAHNVGIQDFQ 180

Query: 181 FDGVPDDAHVRDYRFGIFPDLPYA 183
           FDGVPD+  VRDYRFGIFPD PYA
Sbjct: 181 FDGVPDNTCVRDYRFGIFPDFPYA 204

[Close]

BLAST of Lsi05G002940 vs. NCBI nr
Match: gi|659114514|ref|XP_008457088.1| (PREDICTED: uncharacterized protein LOC103496852 [Cucumis melo])

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 140/204 (68.63%), Postives = 154/204 (75.49%), Query Frame = 1


Query: 1   MSKNQSHLLKVEVS----------------------RGVYKVNINFEQQKVTVTGNVDST 60
           MSKN SH LKVE                         GVYK++IN EQQKVTVTGNVDST
Sbjct: 1   MSKNCSHFLKVETHVLKVHIDCQGCLHRVRKLLNRIEGVYKIDINCEQQKVTVTGNVDST 60

Query: 61  TLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQMKDAADPSYSFQNQYMFPIFDRE 120
            LIKKL KLGKHAELW STS   EGEE+N RK + NQMKD  DP Y+FQNQ+M PI++RE
Sbjct: 61  ILIKKLQKLGKHAELWPSTSTHGEGEESNPRKYLDNQMKDTTDPYYTFQNQHMIPIYNRE 120

Query: 121 FNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARAHCDNEKLGNQMISMAHNVGIQGYQ 180
           FNNR LFE YLDQ  GMS+SFRYHPVTTTAAQKARA+ DNEKLGNQMISMAHNVGIQ +Q
Sbjct: 121 FNNRSLFERYLDQEGGMSNSFRYHPVTTTAAQKARAYYDNEKLGNQMISMAHNVGIQDFQ 180

Query: 181 FDGVPDDAHVRDYRFGIFPDLPYA 183
           FDGVPD+A VR ++FGIFPD PYA
Sbjct: 181 FDGVPDNACVRVHQFGIFPDFPYA 204

[Close]

BLAST of Lsi05G002940 vs. NCBI nr
Match: gi|743784679|ref|XP_011023098.1| (PREDICTED: uncharacterized protein LOC105124691 [Populus euphratica])

HSP 1 Score: 79.7 bits (195), Expect = 5.7e-12
Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = 1


Query: 16  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANLRKNIHNQ 75
           GVY+VNI+ EQ KVT++G VDS TLIKKL++ GKHAE+W   S Q + ++ N   NI +Q
Sbjct: 39  GVYQVNIDAEQHKVTISGTVDSATLIKKLVRAGKHAEVWFQKSNQTQKQKNNCDGNIKSQ 98

Query: 76  MKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFRYHPVTTTAAQKARA- 135
              +     +F+NQ  FP F  E +     + YLD          +      A  + +A 
Sbjct: 99  KPGSVKGLEAFKNQPKFPAFCAEED-----DDYLDDEEEDGDDLMFLGPNQLALLRQQAM 158

Query: 136 HCDNEKLGNQMISMAHNVG 154
           H +N K G   I+   N G
Sbjct: 159 HANNAKKGVGAIAATSNNG 172

[Close]

BLAST of Lsi05G002940 vs. NCBI nr
Match: gi|719961917|ref|XP_010257946.1| (PREDICTED: uncharacterized protein LOC104597858 [Nelumbo nucifera])

HSP 1 Score: 79.3 bits (194), Expect = 7.5e-12
Identity = 46/89 (51.69%), Postives = 59/89 (66.29%), Query Frame = 1


Query: 16  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEE------ANLR 75
           GVY VNI+ EQQKVTV+G+VDS TLIKKL+K GKHAELWS+ S Q++ ++      A   
Sbjct: 39  GVYTVNIDAEQQKVTVSGSVDSGTLIKKLVKYGKHAELWSAKSNQNQKQQLQQSRGAKDN 98

Query: 76  KNIHNQMKDAADPSYSFQNQYMFPIFDRE 99
           KN  +Q + A     +F+NQ  FP F  E
Sbjct: 99  KNNKDQKQGAIKGFQAFKNQPKFPTFSPE 127

[Close]

BLAST of Lsi05G002940 vs. NCBI nr
Match: gi|596170399|ref|XP_007223088.1| (hypothetical protein PRUPE_ppa007015mg [Prunus persica])

HSP 1 Score: 78.2 bits (191), Expect = 1.7e-11
Identity = 48/108 (44.44%), Postives = 63/108 (58.33%), Query Frame = 1


Query: 16  GVYKVNINFEQQKVTVTGNVDSTTLIKKLLKLGKHAELWSSTSKQDEGEEANL---RKNI 75
           GVY+VNI+ +QQKVTV+GNVDS TLIKKL + GKHAELWS  S Q + ++ N     KN 
Sbjct: 39  GVYQVNIDADQQKVTVSGNVDSATLIKKLTRAGKHAELWSQKSNQSQKQKNNCIKDDKNN 98

Query: 76  HNQMKDAADPSYSFQNQYMFPIFDREFNNRLLFEHYLDQGSGMSSSFR 121
             Q +       +F+NQ  FP F  E ++    E++ D        FR
Sbjct: 99  KGQRQGIIKNLEAFKNQQKFPSFSSEEDD----EYFDDDEEDEEDEFR 142

The following BLAST results are available for this feature:

BLAST of Lsi05G002940 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G002940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6R9_CUCSA	2.0e-72	72.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185130 PE=4 SV=1	[more]
B9HW82_POPTR	1.2e-11	41.23	Heavy-metal-associated domain-containing family protein OS=Populus trichocarpa G...	[more]
M5XDU3_PRUPE	1.2e-11	44.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007015mg PE=4 SV=1	[more]
F6HFJ4_VITVI	2.0e-11	50.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04710 PE=4 SV=...	[more]
A0A067FBP2_CITSI	5.8e-11	37.50	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015975mg PE=4 SV=1	[more]

BLAST of Lsi05G002940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G27690.1	3.7e-09	49.09	Heavy metal transport/detoxification superfamily protein	[more]
AT1G23000.1	3.7e-09	52.54	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.1	3.5e-07	48.57	Heavy metal transport/detoxification superfamily protein	[more]
AT3G06130.1	1.0e-06	39.44	Heavy metal transport/detoxification superfamily protein	[more]
AT3G05220.1	1.3e-06	52.94	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Lsi05G002940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202300\|gb\|KGN57433.1\|	2.9e-72	72.06	hypothetical protein Csa_3G185130 [Cucumis sativus]	[more]
gi\|659114514\|ref\|XP_008457088.1\|	1.1e-68	68.63	PREDICTED: uncharacterized protein LOC103496852 [Cucumis melo]	[more]
gi\|743784679\|ref\|XP_011023098.1\|	5.7e-12	37.41	PREDICTED: uncharacterized protein LOC105124691 [Populus euphratica]	[more]
gi\|719961917\|ref\|XP_010257946.1\|	7.5e-12	51.69	PREDICTED: uncharacterized protein LOC104597858 [Nelumbo nucifera]	[more]
gi\|596170399\|ref\|XP_007223088.1\|	1.7e-11	44.44	hypothetical protein PRUPE_ppa007015mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0009908	flower development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002940.1	Lsi05G002940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 16..50 score: 3.
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 15..55 score: 3.9
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 10..54 score: 8.9
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 16..54 score: 1.1
None	No IPR available	PANTHER	PTHR22814:SF75	HEAVY METAL TRANSPORT/DETOXIFICATION DOMAIN-CONTAINING PROTEIN	coord: 16..54 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002940	Csa3G185130	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002940	CSPI03G17490	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002940	Cucsa.108340	Cucumber (Gy14) v1	cgylsiB144
Lsi05G002940	CmaCh01G003500	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G002940	CmoCh01G003680	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G002940	Cla013162	Watermelon (97103) v1	lsiwmB361
Lsi05G002940	MELO3C020302	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002940	ClCG05G010850	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002940	MELO3C020302.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002940	Cla97C05G093160	Watermelon (97103) v2	lsiwmbB329
Lsi05G002940	Bhi01G001338	Wax gourd	lsiwgoB431
Lsi05G002940	Cp4.1LG02g16840	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G002940	Carg07440	Silver-seed gourd	carlsiB700
Lsi05G002940	CsaV3_3G017660	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002940	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002940	Cucumber (Gy14) v2	cgyblsiB199
Lsi05G002940	Silver-seed gourd	carlsiB158
Lsi05G002940	Cucumber (Chinese Long) v3	cuclsiB231
Lsi05G002940	Cucumber (Gy14) v1	cgylsiB322
Lsi05G002940	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G002940	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G002940	Cucurbita pepo (Zucchini)	cpelsiB511