CmoCh01G003680 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G003680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Heavy metal transport/detoxification superfamily protein
Location	Cmo_Chr01 : 1783413 .. 1784344 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAAGAACCAATTCCGTTTCTCGAAGATCGAGGTTTTTTTTCCTTCTTATCACCATCCTCGAACTTTTTTTCCGGTTAAATATCATCTGGGATCGGGAGATTTGAACCTCTCGACGTTTTTCGTTAATCATATATGTATTAACTTGACTTTGTCGATAATGCTAAAATCGTTATATTCTACTTCGGTTAATATTTTGAACGAGAGGCTAATGTTGCGGTCGATTCTCTTCACAGATTACTCGATCGATAATGTTCGAATTATTTCATTGACTTTTTCGTTATCGATTTTGTTTTAACAGATACATGTTCTTAAAGTACACATGAATTGCCAAGGGTGCATGGAGAGAGTAAGAAAACTTCTCAAAAGGATTGAAGGTAAACAATAATGGCTACCTTTTTTATTGTTTTTATTTTTCGTGAAATGAAATGACCATTTTGCCCCTTGCGTTTCAAAAACCGAGATATTTTGTATACTTGTAAGTGTTCGGGTTAACGTACATCGATTGTCGGGTTATGAAATTTAGGAGTATATAAGGTAGATATAGATGCTGAAGAACAAAAGGTGACAATCATAGGCAATGTGGATTCAAGCATTTTGATAAGGAAGCTTGCCAAATTAGGGAAGCAAGCTCAACTTTGGGCATCAACTTCCAAGCAAGATGAAGATGATGAAGAACAAACCCTAAGAAAAAACAAAGGCAATTACTTGGAAGATGCAATAGATCCCTCTTATACCTTCCAAAATGAGTATATGCTTCCAATATTTGATAGCGAATTCAATAACTCGACGCTATTAGAATGTTATCTTGCTCAAGAAAACGGCATGTCGAGTGGTTTTCGACATGGTCCGGTCACACAGAAAGCAAGTGGCCCGATGATATCCATGGCTCATGATGTTGTGGATATTCAAGACTATCAATTTAGTTAG

mRNA sequence

ATGTCAAAGAACCAATTCCGTTTCTCGAAGATCGAGATACATGTTCTTAAAGTACACATGAATTGCCAAGGGTGCATGGAGAGAGTAAGAAAACTTCTCAAAAGGATTGAAGGAGTATATAAGGTAGATATAGATGCTGAAGAACAAAAGGTGACAATCATAGGCAATGTGGATTCAAGCATTTTGATAAGGAAGCTTGCCAAATTAGGGAAGCAAGCTCAACTTTGGGCATCAACTTCCAAGCAAGATGAAGATGATGAAGAACAAACCCTAAGAAAAAACAAAGGCAATTACTTGGAAGATGCAATAGATCCCTCTTATACCTTCCAAAATGAGTATATGCTTCCAATATTTGATAGCGAATTCAATAACTCGACGCTATTAGAATGTTATCTTGCTCAAGAAAACGGCATGTCGAGTGGTTTTCGACATGGTCCGGTCACACAGAAAGCAAGTGGCCCGATGATATCCATGGCTCATGATGTTGTGGATATTCAAGACTATCAATTTAGTTAG

Coding sequence (CDS)

ATGTCAAAGAACCAATTCCGTTTCTCGAAGATCGAGATACATGTTCTTAAAGTACACATGAATTGCCAAGGGTGCATGGAGAGAGTAAGAAAACTTCTCAAAAGGATTGAAGGAGTATATAAGGTAGATATAGATGCTGAAGAACAAAAGGTGACAATCATAGGCAATGTGGATTCAAGCATTTTGATAAGGAAGCTTGCCAAATTAGGGAAGCAAGCTCAACTTTGGGCATCAACTTCCAAGCAAGATGAAGATGATGAAGAACAAACCCTAAGAAAAAACAAAGGCAATTACTTGGAAGATGCAATAGATCCCTCTTATACCTTCCAAAATGAGTATATGCTTCCAATATTTGATAGCGAATTCAATAACTCGACGCTATTAGAATGTTATCTTGCTCAAGAAAACGGCATGTCGAGTGGTTTTCGACATGGTCCGGTCACACAGAAAGCAAGTGGCCCGATGATATCCATGGCTCATGATGTTGTGGATATTCAAGACTATCAATTTAGTTAG

Homology

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BLAST of CmoCh01G003680 vs. Swiss-Prot
Match: CCH_ARATH (Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.9e-09
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 1


Query: 15 VLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSILIRKLAKLGKQAQ 74
          VLKV M+CQGC+  V ++L ++EGV   DID +EQKVT+ GNV+   + + ++K GK+  
Sbjct: 6  VLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKTGKKTS 65

Query: 75 LW----ASTSKQDEDDEEQTLRKNK 96
           W     +  K + D + +T+ + K
Sbjct: 66 YWPVEAEAEPKAEADPKVETVTETK 90

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BLAST of CmoCh01G003680 vs. Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 7.3e-09
Identity = 26/62 (41.94%), Postives = 42/62 (67.74%), Query Frame = 1


Query: 15 VLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSILIRKLAKLGKQAQ 74
          VL+V M C+GC+  V+++L ++EGV   D+D +EQKVT+ GNV    +++ + K GK+  
Sbjct: 6  VLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKKTA 65

Query: 75 LW 77
           W
Sbjct: 66 FW 67

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BLAST of CmoCh01G003680 vs. Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-08
Identity = 21/61 (34.43%), Postives = 45/61 (73.77%), Query Frame = 1


Query: 16 LKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSILIRKLAKLGKQAQL 75
          +KV M+C GC  RVR +++R++GV  V+++ ++ ++T+ G+VD + +++++   GK+A+ 
Sbjct: 30 IKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEF 89

Query: 76 W 77
          W
Sbjct: 90 W 90

[Close]

BLAST of CmoCh01G003680 vs. Swiss-Prot
Match: HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN=HIPP27 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.2e-08
Identity = 30/71 (42.25%), Postives = 49/71 (69.01%), Query Frame = 1


Query: 7  RFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVD-SSILIRK 66
          +F K+EI   KV M+C+GC  RVRK ++ ++GV KV +D ++ K+T+ G V  S ++ R 
Sbjct: 17 QFQKVEI---KVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRV 76

Query: 67 LAKLGKQAQLW 77
          + + GK+A+LW
Sbjct: 77 MHRTGKKAELW 84

[Close]

BLAST of CmoCh01G003680 vs. Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.4e-06
Identity = 20/61 (32.79%), Postives = 41/61 (67.21%), Query Frame = 1


Query: 16 LKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSILIRKLAKLGKQAQL 75
          +KV M+C GC  RV+  +  ++GV  V+++ +  KVT+ G V+   +++++ + GK+A++
Sbjct: 32 IKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEI 91

Query: 76 W 77
          W
Sbjct: 92 W 92

[Close]

BLAST of CmoCh01G003680 vs. TrEMBL
Match: A0A0A0L6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185130 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-48
Identity = 108/183 (59.02%), Postives = 132/183 (72.13%), Query Frame = 1


Query: 1   MSKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSS 60
           MSKN   F K+E  VLKVH++CQGC++RVRKLL RIEGVYK+DI+ E+QKVT+ GNVDS+
Sbjct: 1   MSKNPSHFLKVETRVLKVHVDCQGCLQRVRKLLNRIEGVYKIDINCEQQKVTVTGNVDST 60

Query: 61  ILIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGNYLEDAIDPSYTFQNEYMLPIFDS 120
           ILI+KL KLGK A+LW STSK  E  EE  LRK   N ++DA DP YTFQN++MLPI + 
Sbjct: 61  ILIKKLKKLGKHAELWPSTSKHGE-GEESNLRKYIDNQMKDATDPYYTFQNQHMLPILNR 120

Query: 121 EFNNSTLLECYLAQENGMSSGFRHGPVT-------------QKASGPMISMAHDVVDIQD 171
           EFNN +L E YL QE+GMS+ FR+ PVT             +K    MISMAH+ V IQD
Sbjct: 121 EFNNRSLFERYLDQESGMSNSFRYHPVTTTAAQKARAVYDNEKLGNQMISMAHN-VGIQD 180

[Close]

BLAST of CmoCh01G003680 vs. TrEMBL
Match: A0A067JFP2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02499 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-23
Identity = 69/154 (44.81%), Postives = 94/154 (61.04%), Query Frame = 1


Query: 1   MSKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSS 60
           M +N     KIE HVLKVH+NC+GC E+VRKLLK+IEGVY VDID E+Q V + G VDSS
Sbjct: 1   MLRNGHGILKIETHVLKVHINCEGCKEKVRKLLKKIEGVYSVDIDTEQQMVKVSGCVDSS 60

Query: 61  ILIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGNYLEDAIDPSYTFQNEYMLP-IFD 120
           ILI+KL K GK+A++W+  SK   ++E+  +  N   +L +  + S   +N YM P  F 
Sbjct: 61  ILIKKLIKSGKKAEVWSPVSKYKLNEEQANI--NPKQFLANDSNAS---KNHYMFPKSFI 120

Query: 121 SEFNNSTLLECYLAQENGMSSGFRHGPVTQKASG 154
           +E  +    E + +Q   M +   H PV  K  G
Sbjct: 121 NEIEDKGSFEKFPSQNIKMKAVDNHDPVVAKRMG 149

[Close]

BLAST of CmoCh01G003680 vs. TrEMBL
Match: M5XDU3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007015mg PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 4.9e-20
Identity = 53/121 (43.80%), Postives = 81/121 (66.94%), Query Frame = 1


Query: 3   KNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSIL 62
           +  F+  KI+  VLKV+++C GC ++V+KLL+RIEGVY+V+IDA++QKVT+ GNVDS+ L
Sbjct: 4   EEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVNIDADQQKVTVSGNVDSATL 63

Query: 63  IRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGN--YLEDAIDPSYTFQNEYMLPIFDS 122
           I+KL + GK A+LW+  S Q +  +   ++ +K N    +  I     F+N+   P F S
Sbjct: 64  IKKLTRAGKHAELWSQKSNQSQKQKNNCIKDDKNNKGQRQGIIKNLEAFKNQQKFPSFSS 123

[Close]

BLAST of CmoCh01G003680 vs. TrEMBL
Match: B9SYJ7_RICCO (Chloroplast-targeted copper chaperone, putative OS=Ricinus communis GN=RCOM_1288930 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-19
Identity = 52/121 (42.98%), Postives = 82/121 (67.77%), Query Frame = 1


Query: 3   KNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSIL 62
           +  F+  KI+  VLKV+++C GC ++V+KLL+RIEGVY+V I+AE+QKVTI G+VDS+ L
Sbjct: 4   EEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVSIEAEQQKVTISGSVDSATL 63

Query: 63  IRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGN--YLEDAIDPSYTFQNEYMLPIFDS 122
           I+KL + GK A++W+  S Q+++ +   ++ +K N    +  I     F+N+   P F S
Sbjct: 64  IKKLVRAGKHAEVWSQKSNQNQNQKNDCIKDDKNNKGQKQGIIKGLEAFKNQQKFPAFSS 123

[Close]

BLAST of CmoCh01G003680 vs. TrEMBL
Match: F6HFJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04710 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-19
Identity = 54/124 (43.55%), Postives = 84/124 (67.74%), Query Frame = 1


Query: 1   MSKNQ-FRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDS 60
           M+K++ F+  KI+  VLKV+++C GC ++V+KLL+RIEGVY V+IDAE+Q+VT+ G+VDS
Sbjct: 1   MTKDEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYTVNIDAEQQRVTVSGSVDS 60

Query: 61  SILIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGN--YLEDAIDPSYTFQNEYMLPI 120
             LI+KL K GK A+LW+  S Q++  +   ++ +K N    +  I     F+ +   P+
Sbjct: 61  GTLIKKLVKAGKHAELWSQKSNQNQKQKTNCIKDDKNNKGQKQGLIKGLEAFKTQQKFPV 120

Query: 121 FDSE 122
           F SE
Sbjct: 121 FSSE 124

[Close]

BLAST of CmoCh01G003680 vs. TAIR10
Match: AT3G06130.1 (AT3G06130.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 5.4e-18
Identity = 43/100 (43.00%), Postives = 70/100 (70.00%), Query Frame = 1


Query: 1   MSKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSS 60
           MSK +F   KI+  VLKV+++C GC ++V+K+L++IEGV+   ID+E+ KVT+ G+VD S
Sbjct: 1   MSKEEFM--KIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPS 60

Query: 61  ILIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGNYLE 101
           +LI+KLAK GK A++W +    +  ++ Q   + KG  ++
Sbjct: 61  VLIKKLAKSGKHAEIWGAPKGNNNPNQSQMANQFKGMQID 98

[Close]

BLAST of CmoCh01G003680 vs. TAIR10
Match: AT1G23000.1 (AT1G23000.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 2.0e-17
Identity = 43/91 (47.25%), Postives = 67/91 (73.63%), Query Frame = 1


Query: 1  MSKNQ-FRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDS 60
          M+K++ F+  KI+   L+V+++C+GC ++V+KLL+RIEGV  V I+AE QKVT+ G+VDS
Sbjct: 1  MTKDEDFKLLKIQTFSLRVNIHCEGCNKKVKKLLQRIEGVCHVKIEAEHQKVTVSGSVDS 60

Query: 61 SILIRKLAKLGKQAQLWASTSKQDEDDEEQT 91
          + LI KL K GK A+LW+    Q++  + +T
Sbjct: 61 ATLINKLVKAGKHAELWSPNPNQNQPQKPKT 91

[Close]

BLAST of CmoCh01G003680 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 7.7e-17
Identity = 42/89 (47.19%), Postives = 63/89 (70.79%), Query Frame = 1


Query: 1  MSKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSS 60
          MSK +F   KI+  VLKV+++C GC ++V+K+L++IEGV+   IDAE  KVT+ GNVD S
Sbjct: 1  MSKEEFM--KIQTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPS 60

Query: 61 ILIRKLAKLGKQAQLWASTSKQDEDDEEQ 90
          +LI+KL K GK A++W +      +++ Q
Sbjct: 61 VLIKKLLKSGKHAEIWGAPKGGSNNNQNQ 87

[Close]

BLAST of CmoCh01G003680 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15
Identity = 35/90 (38.89%), Postives = 64/90 (71.11%), Query Frame = 1


Query: 15  VLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSILIRKLAKLGKQAQ 74
           VL+V ++C+GC  +++K+L +I+GVY  +ID ++QKVT+IGNV+  ILI+K+ K G+ A+
Sbjct: 33  VLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAE 92

Query: 75  LWASTSKQDEDDEEQTLRKNKGNYLEDAID 105
           LW ++ + + +++    +K K +  E + D
Sbjct: 93  LWPTSMENNINNDCNYQKKPKKDNEETSGD 122

[Close]

BLAST of CmoCh01G003680 vs. TAIR10
Match: AT5G37860.1 (AT5G37860.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 9.5e-15
Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 1


Query: 8  FSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSILIRKLA 67
          +  ++ + LKV++NCQGC  +V+K L++IEGVY VDID +++ V + GN+D  IL++KL 
Sbjct: 6  YEPLKTYFLKVNINCQGCKMKVKKTLRKIEGVYSVDIDTDQEAVIVRGNLDPEILVKKLN 65

Query: 68 KLGKQAQL 76
          K GK AQL
Sbjct: 66 KRGKHAQL 73

[Close]

BLAST of CmoCh01G003680 vs. NCBI nr
Match: gi|700202300|gb|KGN57433.1| (hypothetical protein Csa_3G185130 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 1.6e-48
Identity = 108/183 (59.02%), Postives = 132/183 (72.13%), Query Frame = 1


Query: 1   MSKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSS 60
           MSKN   F K+E  VLKVH++CQGC++RVRKLL RIEGVYK+DI+ E+QKVT+ GNVDS+
Sbjct: 1   MSKNPSHFLKVETRVLKVHVDCQGCLQRVRKLLNRIEGVYKIDINCEQQKVTVTGNVDST 60

Query: 61  ILIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGNYLEDAIDPSYTFQNEYMLPIFDS 120
           ILI+KL KLGK A+LW STSK  E  EE  LRK   N ++DA DP YTFQN++MLPI + 
Sbjct: 61  ILIKKLKKLGKHAELWPSTSKHGE-GEESNLRKYIDNQMKDATDPYYTFQNQHMLPILNR 120

Query: 121 EFNNSTLLECYLAQENGMSSGFRHGPVT-------------QKASGPMISMAHDVVDIQD 171
           EFNN +L E YL QE+GMS+ FR+ PVT             +K    MISMAH+ V IQD
Sbjct: 121 EFNNRSLFERYLDQESGMSNSFRYHPVTTTAAQKARAVYDNEKLGNQMISMAHN-VGIQD 180

[Close]

BLAST of CmoCh01G003680 vs. NCBI nr
Match: gi|659114514|ref|XP_008457088.1| (PREDICTED: uncharacterized protein LOC103496852 [Cucumis melo])

HSP 1 Score: 196.4 bits (498), Expect = 4.0e-47
Identity = 105/183 (57.38%), Postives = 129/183 (70.49%), Query Frame = 1


Query: 1   MSKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSS 60
           MSKN   F K+E HVLKVH++CQGC+ RVRKLL RIEGVYK+DI+ E+QKVT+ GNVDS+
Sbjct: 1   MSKNCSHFLKVETHVLKVHIDCQGCLHRVRKLLNRIEGVYKIDINCEQQKVTVTGNVDST 60

Query: 61  ILIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGNYLEDAIDPSYTFQNEYMLPIFDS 120
           ILI+KL KLGK A+LW STS   E  EE   RK   N ++D  DP YTFQN++M+PI++ 
Sbjct: 61  ILIKKLQKLGKHAELWPSTSTHGE-GEESNPRKYLDNQMKDTTDPYYTFQNQHMIPIYNR 120

Query: 121 EFNNSTLLECYLAQENGMSSGFRHGPVT-------------QKASGPMISMAHDVVDIQD 171
           EFNN +L E YL QE GMS+ FR+ PVT             +K    MISMAH+ V IQD
Sbjct: 121 EFNNRSLFERYLDQEGGMSNSFRYHPVTTTAAQKARAYYDNEKLGNQMISMAHN-VGIQD 180

[Close]

BLAST of CmoCh01G003680 vs. NCBI nr
Match: gi|802762043|ref|XP_012089937.1| (PREDICTED: uncharacterized protein LOC105648226 [Jatropha curcas])

HSP 1 Score: 116.7 bits (291), Expect = 4.0e-23
Identity = 69/154 (44.81%), Postives = 94/154 (61.04%), Query Frame = 1


Query: 1   MSKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSS 60
           M +N     KIE HVLKVH+NC+GC E+VRKLLK+IEGVY VDID E+Q V + G VDSS
Sbjct: 1   MLRNGHGILKIETHVLKVHINCEGCKEKVRKLLKKIEGVYSVDIDTEQQMVKVSGCVDSS 60

Query: 61  ILIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGNYLEDAIDPSYTFQNEYMLP-IFD 120
           ILI+KL K GK+A++W+  SK   ++E+  +  N   +L +  + S   +N YM P  F 
Sbjct: 61  ILIKKLIKSGKKAEVWSPVSKYKLNEEQANI--NPKQFLANDSNAS---KNHYMFPKSFI 120

Query: 121 SEFNNSTLLECYLAQENGMSSGFRHGPVTQKASG 154
           +E  +    E + +Q   M +   H PV  K  G
Sbjct: 121 NEIEDKGSFEKFPSQNIKMKAVDNHDPVVAKRMG 149

[Close]

BLAST of CmoCh01G003680 vs. NCBI nr
Match: gi|502137812|ref|XP_004503195.1| (PREDICTED: uncharacterized protein LOC101496004 [Cicer arietinum])

HSP 1 Score: 109.0 bits (271), Expect = 8.3e-21
Identity = 56/122 (45.90%), Postives = 80/122 (65.57%), Query Frame = 1


Query: 2   SKNQFRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDSSI 61
           + N+   SKIE  VLKVHMNCQGC  +VRK+L+++EGVY+V I+AEEQKV + G V+ S 
Sbjct: 3   TNNENELSKIETFVLKVHMNCQGCRTKVRKILRKVEGVYEVKINAEEQKVIVTGIVNPST 62

Query: 62  LIRKLAKLGKQAQLWASTSKQDEDDEEQTLRKNKGNYLEDAIDPSYTFQNEYMLPIFDSE 121
           L++KLAKLGK A++      Q+       ++ N  N  E  I+   TF+N+YM+P +  +
Sbjct: 63  LLQKLAKLGKHAEILNEDYNQEHTTYHDKVKDNNDNNQEYIINNQSTFENQYMIPPYYGK 122

Query: 122 FN 124
            N
Sbjct: 123 DN 124

[Close]

BLAST of CmoCh01G003680 vs. NCBI nr
Match: gi|719961917|ref|XP_010257946.1| (PREDICTED: uncharacterized protein LOC104597858 [Nelumbo nucifera])

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-20
Identity = 59/127 (46.46%), Postives = 85/127 (66.93%), Query Frame = 1


Query: 1   MSKNQ-FRFSKIEIHVLKVHMNCQGCMERVRKLLKRIEGVYKVDIDAEEQKVTIIGNVDS 60
           M+K++ F+F KI+  VLKV+++C GC + V+KLL+RIEGVY V+IDAE+QKVT+ G+VDS
Sbjct: 1   MTKDEDFKFLKIQTCVLKVNIHCDGCKQEVKKLLQRIEGVYTVNIDAEQQKVTVSGSVDS 60

Query: 61  SILIRKLAKLGKQAQLWASTSKQDEDDEEQTLR-----KNKGNYLEDAIDPSYTFQNEYM 120
             LI+KL K GK A+LW++ S Q++  + Q  R     KN  +  + AI     F+N+  
Sbjct: 61  GTLIKKLVKYGKHAELWSAKSNQNQKQQLQQSRGAKDNKNNKDQKQGAIKGFQAFKNQPK 120

Query: 121 LPIFDSE 122
            P F  E
Sbjct: 121 FPTFSPE 127

The following BLAST results are available for this feature:

BLAST of CmoCh01G003680 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCH_ARATH	1.9e-09	38.82	Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1	[more]
ATOX1_ARATH	7.3e-09	41.94	Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2	[more]
HIP21_ARATH	6.2e-08	34.43	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN...	[more]
HIP27_ARATH	6.2e-08	42.25	Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN...	[more]
HIP20_ARATH	4.4e-06	32.79	Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN...	[more]

BLAST of CmoCh01G003680 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6R9_CUCSA	1.1e-48	59.02	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185130 PE=4 SV=1	[more]
A0A067JFP2_JATCU	2.8e-23	44.81	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02499 PE=4 SV=1	[more]
M5XDU3_PRUPE	4.9e-20	43.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007015mg PE=4 SV=1	[more]
B9SYJ7_RICCO	1.9e-19	42.98	Chloroplast-targeted copper chaperone, putative OS=Ricinus communis GN=RCOM_1288...	[more]
F6HFJ4_VITVI	1.9e-19	43.55	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04710 PE=4 SV=...	[more]

BLAST of CmoCh01G003680 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G06130.1	5.4e-18	43.00	Heavy metal transport/detoxification superfamily protein	[more]
AT1G23000.1	2.0e-17	47.25	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.1	7.7e-17	47.19	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	9.5e-15	38.89	Heavy metal transport/detoxification superfamily protein	[more]
AT5G37860.1	9.5e-15	50.00	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of CmoCh01G003680 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202300\|gb\|KGN57433.1\|	1.6e-48	59.02	hypothetical protein Csa_3G185130 [Cucumis sativus]	[more]
gi\|659114514\|ref\|XP_008457088.1\|	4.0e-47	57.38	PREDICTED: uncharacterized protein LOC103496852 [Cucumis melo]	[more]
gi\|802762043\|ref\|XP_012089937.1\|	4.0e-23	44.81	PREDICTED: uncharacterized protein LOC105648226 [Jatropha curcas]	[more]
gi\|502137812\|ref\|XP_004503195.1\|	8.3e-21	45.90	PREDICTED: uncharacterized protein LOC101496004 [Cicer arietinum]	[more]
gi\|719961917\|ref\|XP_010257946.1\|	3.2e-20	46.46	PREDICTED: uncharacterized protein LOC104597858 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030001	metal ion transport
biological_process	GO:0009908	flower development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G003680.1	CmoCh01G003680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 16..70 score: 1.1
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 20..75 score: 12
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 12..76 score: 1.27
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 13..77 score: 1.0
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..96 score: 7.5
None	No IPR available	PANTHER	PTHR22814:SF150	SUBFAMILY NOT NAMED	coord: 1..96 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G003680	Cucsa.108340	Cucumber (Gy14) v1	cgycmoB0249
CmoCh01G003680	CmaCh01G003500	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G003680	Cla013162	Watermelon (97103) v1	cmowmB427
CmoCh01G003680	Csa3G185130	Cucumber (Chinese Long) v2	cmocuB445
CmoCh01G003680	MELO3C020302	Melon (DHL92) v3.5.1	cmomeB421
CmoCh01G003680	ClCG05G010850	Watermelon (Charleston Gray)	cmowcgB406
CmoCh01G003680	CSPI03G17490	Wild cucumber (PI 183967)	cmocpiB449
CmoCh01G003680	Lsi05G002940	Bottle gourd (USVL1VR-Ls)	cmolsiB430
CmoCh01G003680	Cp4.1LG02g16840	Cucurbita pepo (Zucchini)	cmocpeB449
CmoCh01G003680	MELO3C020302.2	Melon (DHL92) v3.6.1	cmomedB483
CmoCh01G003680	CsaV3_3G017660	Cucumber (Chinese Long) v3	cmocucB0535
CmoCh01G003680	Cla97C05G093160	Watermelon (97103) v2	cmowmbB454
CmoCh01G003680	Bhi01G001338	Wax gourd	cmowgoB0556
CmoCh01G003680	Carg07440	Silver-seed gourd	carcmoB1033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G003680	Cucurbita pepo (Zucchini)	cmocpeB453
CmoCh01G003680	Cucumber (Gy14) v2	cgybcmoB339
CmoCh01G003680	Silver-seed gourd	carcmoB0249
CmoCh01G003680	Cucumber (Chinese Long) v3	cmocucB0532
CmoCh01G003680	Cucurbita moschata (Rifu)	cmocmoB203
CmoCh01G003680	Cucumber (Gy14) v1	cgycmoB0552
CmoCh01G003680	Cucurbita maxima (Rimu)	cmacmoB257