Cucsa.108340 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ACACGTGTTCTTAAAGTACACGTTGATTGTCAAGGTTGCCTCCAGAGAGTAAGAAAACTTCTCAACAGGATTGAAGGTATTTATTATTATTTTGTTGCTTGTAAAAACTAATCTATAGGTTCTTTTTTtATTTTATACTAAGAAATATGTACACTTTAGTTTGAATAACAGGTTTGTTTGTGACTCGTGTGAAACACATATGAAAACTACTATGCCAAGAGTTTTATAGATCATATCTTTTGTTTTAACTTTAAAAAAAAaTGCATCTTTTCGATCCTATGTTTCACTTATTTTCTTCTACATGTTTATTTTTtAAAAGATAAATAAACTGTATTCTTAGTTCATGACTGTTTAGTAGATTAACATAAAAATTTATTTTCCGtAAAAaggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAaaaaaaaCTaCCTATTCTATAAAATGAGCTTCTTGTGTTTCCAAAGAAAAAAaTGAAGAAAAAAGGAAAAaGAAAACATCTTTTTCTTTAAAATGAGCCTTTTGTGTTTTGAAACAAATGTTTTTAAAATAGTGATTTCAAATATAACATCTTCCATTGGCTAACTTTTATTATTGGAATTCAAATATACAGCCTTATTCTCATTTGATCTTATGGAATTTAGGAGTTTATAAGATAGACATAAATTGTGAACAACAAAAGGTCACAGTGACGGGCAATGTGGATTCAACCATTTTGATAAAGAAGCTTAAAAAATTAGGTAAGCATGCTGAACTTTGGCCTTCAACTTCCAAACATGGTGAAGGTGAAGAATCAAACCTAAGAAAATACATAGACAACCAGATGAAAGATGCAACAGACCCATACTATACCTTCCAAAATCAGCACATGCTTCCTATACTTAATAGAGAATTCAACAATCGGTCGCTATTTGAACGTTACCTCGATCAAGAAAGTGGCATGTCCAACAGTTTCCG ACACGTGTTCTTAAAGTACACGTTGATTGTCAAGGTTGCCTCCAGAGAGTAAGAAAACTTCTCAACAGGATTGAAGGAGTTTATAAGATAGACATAAATTGTGAACAACAAAAGGTCACAGTGACGGGCAATGTGGATTCAACCATTTTGATAAAGAAGCTTAAAAAATTAGGTAAGCATGCTGAACTTTGGCCTTCAACTTCCAAACATGGTGAAGGTGAAGAATCAAACCTAAGAAAATACATAGACAACCAGATGAAAGATGCAACAGACCCATACTATACCTTCCAAAATCAGCACATGCTTCCTATACTTAATAGAGAATTCAACAATCGGTCGCTATTTGAACGTTACCTCGATCAAGAAAGTGGCATGTCCAACAGTTTCCG ACACGTGTTCTTAAAGTACACGTTGATTGTCAAGGTTGCCTCCAGAGAGTAAGAAAACTTCTCAACAGGATTGAAGGAGTTTATAAGATAGACATAAATTGTGAACAACAAAAGGTCACAGTGACGGGCAATGTGGATTCAACCATTTTGATAAAGAAGCTTAAAAAATTAGGTAAGCATGCTGAACTTTGGCCTTCAACTTCCAAACATGGTGAAGGTGAAGAATCAAACCTAAGAAAATACATAGACAACCAGATGAAAGATGCAACAGACCCATACTATACCTTCCAAAATCAGCACATGCTTCCTATACTTAATAGAGAATTCAACAATCGGTCGCTATTTGAACGTTACCTCGATCAAGAAAGTGGCATGTCCAACAGTTTCCG TRVLKVHVDCQGCLQRVRKLLNRIEGVYKIDINCEQQKVTVTGNVDSTILIKKLKKLGKHAELWPSTSKHGEGEESNLRKYIDNQMKDATDPYYTFQNQHMLPILNREFNNRSLFERYLDQESGMSNSFX
BLAST of Cucsa.108340 vs. Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11 Identity = 28/67 (41.79%), Postives = 47/67 (70.15%), Query Frame = 1
BLAST of Cucsa.108340 vs. Swiss-Prot
Match: CCH_ARATH (Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09 Identity = 29/65 (44.62%), Postives = 42/65 (64.62%), Query Frame = 1
BLAST of Cucsa.108340 vs. Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08 Identity = 24/62 (38.71%), Postives = 45/62 (72.58%), Query Frame = 1
BLAST of Cucsa.108340 vs. Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 4.7e-08 Identity = 25/64 (39.06%), Postives = 42/64 (65.62%), Query Frame = 1
BLAST of Cucsa.108340 vs. Swiss-Prot
Match: HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana GN=HIPP27 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 27/63 (42.86%), Postives = 44/63 (69.84%), Query Frame = 1
BLAST of Cucsa.108340 vs. TrEMBL
Match: A0A0A0L6R9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G185130 PE=4 SV=1) HSP 1 Score: 266.9 bits (681), Expect = 1.3e-68 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.108340 vs. TrEMBL
Match: D7TST6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01780 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.9e-22 Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 1
BLAST of Cucsa.108340 vs. TrEMBL
Match: M5XDU3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007015mg PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 3.2e-19 Identity = 55/125 (44.00%), Postives = 77/125 (61.60%), Query Frame = 1
BLAST of Cucsa.108340 vs. TrEMBL
Match: A0A067JFP2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02499 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 1.2e-18 Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 1
BLAST of Cucsa.108340 vs. TrEMBL
Match: A0A103XKH7_CYNCS (Heavy metal-associated domain, HMA (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_005585 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-18 Identity = 57/139 (41.01%), Postives = 82/139 (58.99%), Query Frame = 1
BLAST of Cucsa.108340 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 89.0 bits (219), Expect = 2.4e-18 Identity = 38/80 (47.50%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of Cucsa.108340 vs. TAIR10
Match: AT5G37860.1 (AT5G37860.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 2.6e-17 Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 1
BLAST of Cucsa.108340 vs. TAIR10
Match: AT3G06130.1 (AT3G06130.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 84.7 bits (208), Expect = 4.5e-17 Identity = 39/78 (50.00%), Postives = 56/78 (71.79%), Query Frame = 1
BLAST of Cucsa.108340 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 84.3 bits (207), Expect = 5.9e-17 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 1
BLAST of Cucsa.108340 vs. TAIR10
Match: AT1G23000.1 (AT1G23000.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 83.6 bits (205), Expect = 1.0e-16 Identity = 39/81 (48.15%), Postives = 53/81 (65.43%), Query Frame = 1
BLAST of Cucsa.108340 vs. NCBI nr
Match: gi|700202300|gb|KGN57433.1| (hypothetical protein Csa_3G185130 [Cucumis sativus]) HSP 1 Score: 266.9 bits (681), Expect = 1.8e-68 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1
BLAST of Cucsa.108340 vs. NCBI nr
Match: gi|659114514|ref|XP_008457088.1| (PREDICTED: uncharacterized protein LOC103496852 [Cucumis melo]) HSP 1 Score: 249.6 bits (636), Expect = 3.0e-63 Identity = 118/129 (91.47%), Postives = 122/129 (94.57%), Query Frame = 1
BLAST of Cucsa.108340 vs. NCBI nr
Match: gi|296087184|emb|CBI33558.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21 Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 1
BLAST of Cucsa.108340 vs. NCBI nr
Match: gi|731417558|ref|XP_010660345.1| (PREDICTED: uncharacterized protein LOC104881553 [Vitis vinifera]) HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21 Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = 1
BLAST of Cucsa.108340 vs. NCBI nr
Match: gi|596170399|ref|XP_007223088.1| (hypothetical protein PRUPE_ppa007015mg [Prunus persica]) HSP 1 Score: 102.8 bits (255), Expect = 4.5e-19 Identity = 55/125 (44.00%), Postives = 77/125 (61.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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