Lsi05G001910 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001910
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Basic blue-like protein
Location	chr05 : 2675672 .. 2677383 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATAAAACTCTCCTGTTAATTAGCACTAAACACAAAGAGAGTTTGGTAAAAGAATAATAAAAATGGGTCAGGGAAAAGGCAGTGCCATTGCAATTACTTTGTTGCTTTGCCTTTTCCTCATCCAATCTCAAATGGCTCAAGCTAGAGTCTACACTGTTGGAGATGCCAAAGGATGGACCTTTAATGTCAATGCTTGGACTAAGGGAAAGATTTTTCGTGCTGGTGATGTACTCGGTAAGTTTCTCGTTCACACCTCGTACCCCCTTTATCTTATAATATATGTATGTTCGGATAGTTTTTGTATGATAACTTTTTTGTTTTTATAATTTAGGTATAAAAATAATAATTAAGTGTATACCGTATAGTATTTAGAACAAGAAAATTTATTTCAAATGGGTGGTCGTTATTGCAATTTCTAATTATCTTTTTCTATAATAAATCTCATTTTGTATCCTAATGCCGATAAGTGGTTGGGAGAGAGGAGATTGCATTGCCTATCTTCTATGAATCATAAAGTAATTAAAAATGTCACTTAAACTTCATTAAAAAGTGTCATAGAAAGAAAAGAAACAAAAGATGAATTAGAGATCTAATTTTATGTACCAAAAAATATTATAATTAAGCATAAACACATCATACAACATCTCATATATTTCTTAATCCTTTTATATCTTAATGTTTCAACAAATATAAACTTATAAAGTCAACGGTAATCATTACAACAATTTTAGTTTTAGCTGTCAGTTTTATACTGTCATAGTATATGTATGATGACGTATTACAAACTGTTATTGTATTCAGTGTCATCTTGGATATGATGGCGGTTTTGAACCGCCATCAACTATTCCGCCATCGTAATTGTTTATATGCTCATATTTGTTGAGCATATAAACCACCCCTTTTACTCGAGATATCAGGAATAGTTTAAATCCCTATTTTCTTAAAAGAAAAAAGAAAAAAAAAACTTAATACTACAAACCCTTCTTCACATTCAAAGATTAAAAAGTTCATCGATATATATCTGTAAAACTGAAATCTCAATATAACATTATAATCCCTTCTTCACACCATATTAAATGACGGAGTTTTTTTTTTTTTTTTTTGGACCATATAAGAGGTGGAGCGAATCTAATATCTAACTTCGAGGTTGATAATACAAGTATTATACAAGTCAAGCTATGTTCATTTTGACATGACGGCTATTTTAATTCGCCTTAAATTTACTCATTCTCTCGATACACATTCTAAAAAATAATAATATTATTGGAAACAGTATTCAAGTATCCTCCAATGTTACACAATGTGGTGGTGTTGAAGAACAAAGTGGCTTACAATTGGTGTCTAAAACCAAGAGGTTCAAGAGTTTACCAAACAGGAAAAGACACAATCAAGCTTGTCAAAGGATACAACTATTTCATTTGCAGTTTCCCTGGCCATTGCAAAGCTGGGGTCAAGATTGCCATTAAAGCTCTTTGAAATTATATTTCTAATTATTACATTTAAAAAAAAAAAAGAGCAATTTATTATATGTTTTAATTAGTTTTTTTGATGTTGGAAAGTGTGTGCTTGTAATGTTGTTTTGTTTTAATTTTCATTTCATTTTTCTATGTTTTGAGATTAGAAGAAGATCATATTATTGTATTAATTAAATGTGGCTACTTGTATGGATTGGAAGGAGTTGAAAAATAATATGGCTTTTATTATGAACTAA

mRNA sequence

TTATAAAACTCTCCTGTTAATTAGCACTAAACACAAAGAGAGTTTGGTAAAAGAATAATAAAAATGGGTCAGGGAAAAGGCAGTGCCATTGCAATTACTTTGTTGCTTTGCCTTTTCCTCATCCAATCTCAAATGGCTCAAGCTAGAGTCTACACTGTTGGAGATGCCAAAGGATGGACCTTTAATGTCAATGCTTGGACTAAGGGAAAGATTTTTCGTGCTGGTGATGTACTCGTATTCAAGTATCCTCCAATGTTACACAATGTGGTGGTGTTGAAGAACAAAGTGGCTTACAATTGGTGTCTAAAACCAAGAGGTTCAAGAGTTTACCAAACAGGAAAAGACACAATCAAGCTTGTCAAAGGATACAACTATTTCATTTGCAGTTTCCCTGGCCATTGCAAAGCTGGGGTCAAGATTGCCATTAAAGCTCTTTGAAATTATATTTCTAATTATTACATTTAAAAAAAAAAAAGAGCAATTTATTATATGTTTTAATTAGTTTTTTTGATGTTGGAAAGTGTGTGCTTGTAATGTTGTTTTGTTTTAATTTTCATTTCATTTTTCTATGTTTTGAGATTAGAAGAAGATCATATTATTGTATTAATTAAATGTGGCTACTTGTATGGATTGGAAGGAGTTGAAAAATAATATGGCTTTTATTATGAACTAA

Coding sequence (CDS)

ATGGGTCAGGGAAAAGGCAGTGCCATTGCAATTACTTTGTTGCTTTGCCTTTTCCTCATCCAATCTCAAATGGCTCAAGCTAGAGTCTACACTGTTGGAGATGCCAAAGGATGGACCTTTAATGTCAATGCTTGGACTAAGGGAAAGATTTTTCGTGCTGGTGATGTACTCGTATTCAAGTATCCTCCAATGTTACACAATGTGGTGGTGTTGAAGAACAAAGTGGCTTACAATTGGTGTCTAAAACCAAGAGGTTCAAGAGTTTACCAAACAGGAAAAGACACAATCAAGCTTGTCAAAGGATACAACTATTTCATTTGCAGTTTCCCTGGCCATTGCAAAGCTGGGGTCAAGATTGCCATTAAAGCTCTTTGA

Protein sequence

MGQGKGSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLVFKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVKIAIKAL

Homology

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BLAST of Lsi05G001910 vs. Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-29
Identity = 63/126 (50.00%), Postives = 82/126 (65.08%), Query Frame = 1


Query: 1   MGQGKGSA---IAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVL 60
           M QG GSA   + + ++L   +   ++A++ VYTVGD  GWTF  + W  GK FRAGDVL
Sbjct: 1   MAQGSGSAERALVLGVVLVFLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVL 60

Query: 61  VFKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGV 120
           VFKY P +HNVV +     Y  C    GSRV+++G D I L +G NYFICS PGHC+ G+
Sbjct: 61  VFKYNPAVHNVVSVP-AGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGL 120

Query: 121 KIAIKA 124
           KIA+ A
Sbjct: 121 KIAVTA 125

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BLAST of Lsi05G001910 vs. Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 1.6e-29
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 1


Query: 1   MGQGKGSA------IAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAG 60
           M +G+GSA      I   + + + L+Q+   QA  YTVGD+  WTFN   W KGK FRAG
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAG 60

Query: 61  DVLVFKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCK 120
           DVLVF Y P +HNVV + +  +YN C  P G++ Y +GKD I L KG N+FIC+FP HC+
Sbjct: 61  DVLVFNYNPRMHNVVKV-DSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGVKIAIKAL 125
           + +KIA+ A+
Sbjct: 121 SDMKIAVTAV 129

[Close]

BLAST of Lsi05G001910 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-29
Identity = 55/96 (57.29%), Postives = 74/96 (77.08%), Query Frame = 1


Query: 29  VYTVGDAKGWTFNVNAWTKGKIFRAGDVLVFKYPPMLHNVVVLKNKVAYNWCLKPRGSRV 88
           VY VG + GWTFN  +W KGK FRAGD+L+F Y P +HNVVV+ N+  ++ C  P G++V
Sbjct: 2   VYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVV-NQGGFSTCNTPAGAKV 61

Query: 89  YQTGKDTIKLVKGYNYFICSFPGHCKAGVKIAIKAL 125
           Y +G+D IKL KG +YFIC+FPGHC++G+KIA+ AL
Sbjct: 62  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96

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BLAST of Lsi05G001910 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 3.9e-12
Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 1


Query: 6   GSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVN--AWTKGKIFRAGDVLVFKYPP 65
           GS +A  LLL  FL       A  + VGD  GWT N++   W  GK FR GD L F Y  
Sbjct: 2   GSTVAAALLL--FLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYG- 61

Query: 66  MLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVK-GYNYFICSFPGHCKAGVKIAIK 125
           + H+V V+ +K  Y+ C     ++ +  G   I L   G  +F+C   GHCK G+K+A+ 
Sbjct: 62  LSHSVSVV-DKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVP 119

[Close]

BLAST of Lsi05G001910 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-11
Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 1


Query: 27  ARVYTVGDAKGWT----FNVNAWTKGKIFRAGDVLVFKYPPMLHNVVVLKNKVAYNWCLK 86
           A V+ VGD+ GWT    ++   W     F  GD L+F Y    HNV+ + ++  +  C  
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQV-DQEQFKSCNS 60

Query: 87  PRGSRVYQTGKDTIKLVK-GYNYFICSFPGHCKAGVKIAIK 123
              +  Y +G D+I L + G  YF+C  PGHC+ G K+ IK
Sbjct: 61  SSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIK 100

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BLAST of Lsi05G001910 vs. TrEMBL
Match: A0A0A0L9C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214580 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 3.9e-59
Identity = 106/124 (85.48%), Postives = 117/124 (94.35%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLVFK 60
           MGQGKGSA AITLLLC+FLIQS++AQA+VYTVGDA GWTFNVN WTKGKIFRAGD++VFK
Sbjct: 1   MGQGKGSAFAITLLLCIFLIQSEIAQAKVYTVGDALGWTFNVNTWTKGKIFRAGDIIVFK 60

Query: 61  YPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVKIA 120
           YP M HNVV LKNKVAYNWCLKP+GS+VYQTGKD IKLVKGYNYFICS+PGHCKAG+KIA
Sbjct: 61  YPRMAHNVVSLKNKVAYNWCLKPKGSKVYQTGKDRIKLVKGYNYFICSYPGHCKAGMKIA 120

Query: 121 IKAL 125
           IKA+
Sbjct: 121 IKAI 124

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BLAST of Lsi05G001910 vs. TrEMBL
Match: A0A0A0LC13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G215590 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.9e-37
Identity = 74/126 (58.73%), Postives = 97/126 (76.98%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLI--QSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLV 60
           MG+G+GSA+   +++C+ L+   S MA A VYTVG A+GWTFNV +W KGK FRAGD LV
Sbjct: 1   MGEGRGSAMVCVVMVCMLLMLQYSHMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVK 120
           F Y P  HNVV + N++ Y+ C+ PRGS+V+QTGKD IKLVKG N+FIC+ PGHC+ G+K
Sbjct: 61  FNYSPSAHNVVGV-NRLGYSRCITPRGSKVFQTGKDQIKLVKGQNFFICNIPGHCQGGMK 120

Query: 121 IAIKAL 125
           IA+ A+
Sbjct: 121 IAVNAI 125

[Close]

BLAST of Lsi05G001910 vs. TrEMBL
Match: M5Y261_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021383mg PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 5.5e-37
Identity = 77/126 (61.11%), Postives = 94/126 (74.60%), Query Frame = 1


Query: 1   MGQGKGSA-IAITLLLCL--FLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVL 60
           MGQG+GSA + + L++CL   L+Q + A+AR YTVGDA GWTFNV  W KGK FRAGDVL
Sbjct: 1   MGQGRGSAGVGVVLVMCLSLLLLQCEWAEARSYTVGDAGGWTFNVAGWPKGKSFRAGDVL 60

Query: 61  VFKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGV 120
           VF Y    HNVV + NK  Y  C  PR ++V+QTGKD IKL KG N+FIC+FPGHC++G+
Sbjct: 61  VFNYASSAHNVVAV-NKAGYQTCSSPRAAKVFQTGKDQIKLAKGQNFFICNFPGHCQSGM 120

Query: 121 KIAIKA 124
           KIAI A
Sbjct: 121 KIAITA 125

[Close]

BLAST of Lsi05G001910 vs. TrEMBL
Match: V7CQP8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G250700g PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 7.9e-36
Identity = 73/123 (59.35%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLVFK 60
           MG G+GSA+ + + LC  ++ SQMA A  YTVG + GWTFN   W  GK FRAGD LVFK
Sbjct: 1   MGLGRGSAVVLLISLCFLVLHSQMAHAATYTVGGSGGWTFNTVGWPNGKRFRAGDTLVFK 60

Query: 61  YPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVKIA 120
           Y    HNVV + NKV Y  C  PRG+RVYQ+G D IKLVKG NYFIC++ GHC++G+KIA
Sbjct: 61  YSSGAHNVVAV-NKVGYGSCKTPRGARVYQSGNDQIKLVKGQNYFICNYVGHCESGMKIA 120

Query: 121 IKA 124
           I A
Sbjct: 121 INA 122

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BLAST of Lsi05G001910 vs. TrEMBL
Match: D7T037_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01140 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.3e-35
Identity = 76/124 (61.29%), Postives = 89/124 (71.77%), Query Frame = 1


Query: 1   MGQGKGSAI-AITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLVF 60
           M  G+GSA+ AI L+LCL L    M  A  +TVG A GW FN   W KGK F+AGDVLVF
Sbjct: 1   MAVGRGSAVVAIVLVLCLVL-PCDMVDAATFTVGGASGWAFNAVGWPKGKRFKAGDVLVF 60

Query: 61  KYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVKI 120
            Y P  HNVV + NK  YN C  PRGS+VYQTGKD IKLVKG NYF+C+FPGHC++G+KI
Sbjct: 61  NYSPSAHNVVAV-NKAGYNGCTTPRGSKVYQTGKDQIKLVKGANYFLCNFPGHCQSGMKI 120

Query: 121 AIKA 124
           A+ A
Sbjct: 121 AVTA 122

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BLAST of Lsi05G001910 vs. TAIR10
Match: AT2G02850.1 (AT2G02850.1 plantacyanin)

HSP 1 Score: 130.2 bits (326), Expect = 8.9e-31
Identity = 63/130 (48.46%), Postives = 85/130 (65.38%), Query Frame = 1


Query: 1   MGQGKGSA------IAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAG 60
           M +G+GSA      I   + + + L+Q+   QA  YTVGD+  WTFN   W KGK FRAG
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHFRAG 60

Query: 61  DVLVFKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCK 120
           DVLVF Y P +HNVV + +  +YN C  P G++ Y +GKD I L KG N+FIC+FP HC+
Sbjct: 61  DVLVFNYNPRMHNVVKV-DSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGVKIAIKAL 125
           + +KIA+ A+
Sbjct: 121 SDMKIAVTAV 129

[Close]

BLAST of Lsi05G001910 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 6.6e-18
Identity = 50/122 (40.98%), Postives = 65/122 (53.28%), Query Frame = 1


Query: 6   GSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVN--AWTKGKIFRAGDVLVFKYPP 65
           GS  A  LLL L L+      A  + VGD  GWT  V   +W   K FR GD L FKY P
Sbjct: 2   GSTAATALLLLLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGP 61

Query: 66  MLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVK-GYNYFICSFPGHCKAGVKIAIK 125
             H+V V+ NK  Y+ C   R ++ +  G   I L K G  +F+C  PGHC  G+K+A++
Sbjct: 62  S-HSVAVV-NKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQ 121

[Close]

BLAST of Lsi05G001910 vs. TAIR10
Match: AT5G26330.1 (AT5G26330.1 Cupredoxin superfamily protein)

HSP 1 Score: 85.9 bits (211), Expect = 1.9e-17
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 1


Query: 7   SAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNA----WTKGKIFRAGDVLVFKYP 66
           +AI +  L C+ ++  ++++A VY VGD+ GWT   N     W   K F  GD ++F+Y 
Sbjct: 2   AAIIVAALACI-VVMLRLSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEYN 61

Query: 67  PMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVK-GYNYFICSFPGHCKAGVKIAI 125
           P  HNV+ + + + Y  C   +    + TG D+I L   G+++F C  PGHC AG K+ +
Sbjct: 62  PQFHNVMRVTHPM-YRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDL 121

[Close]

BLAST of Lsi05G001910 vs. TAIR10
Match: AT1G17800.1 (AT1G17800.1 early nodulin-like protein 22)

HSP 1 Score: 85.1 bits (209), Expect = 3.3e-17
Identity = 54/138 (39.13%), Postives = 74/138 (53.62%), Query Frame = 1


Query: 1   MGQGKG--SAIAITL-------LLCLFLIQSQMAQAR--VYTVGDAKGW--TFNVNAWTK 60
           M Q  G  S +A+T+       +LCLFL  +     R   Y VG   GW     ++ W +
Sbjct: 1   MAQSSGHVSYVAVTVPIAIVMTVLCLFLANAVTYARRPTTYIVGGDDGWDPVVPMDTWAR 60

Query: 61  GKIFRAGDVLVFKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFIC 120
           GK F AGD+L FKY     N++V+ N+  Y  C    G+  Y +G D I+L  GYNYFI 
Sbjct: 61  GKTFYAGDILEFKYDYQRFNLIVV-NRTGYETCEANVGAIEYSSGDDKIQLNYGYNYFIG 120

Query: 121 SF-PGHCKAGVKIAIKAL 125
           ++ P  C  G+K+AIKAL
Sbjct: 121 TYTPEDCTTGLKMAIKAL 137

[Close]

BLAST of Lsi05G001910 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 72.4 bits (176), Expect = 2.2e-13
Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 1


Query: 6   GSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVN--AWTKGKIFRAGDVLVFKYPP 65
           GS +A  LLL  FL       A  + VGD  GWT N++   W  GK FR GD L F Y  
Sbjct: 2   GSTVAAALLL--FLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYG- 61

Query: 66  MLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVK-GYNYFICSFPGHCKAGVKIAIK 125
           + H+V V+ +K  Y+ C     ++ +  G   I L   G  +F+C   GHCK G+K+A+ 
Sbjct: 62  LSHSVSVV-DKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVP 119

[Close]

BLAST of Lsi05G001910 vs. NCBI nr
Match: gi|449464492|ref|XP_004149963.1| (PREDICTED: basic blue protein-like [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 5.6e-59
Identity = 106/124 (85.48%), Postives = 117/124 (94.35%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLVFK 60
           MGQGKGSA AITLLLC+FLIQS++AQA+VYTVGDA GWTFNVN WTKGKIFRAGD++VFK
Sbjct: 1   MGQGKGSAFAITLLLCIFLIQSEIAQAKVYTVGDALGWTFNVNTWTKGKIFRAGDIIVFK 60

Query: 61  YPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVKIA 120
           YP M HNVV LKNKVAYNWCLKP+GS+VYQTGKD IKLVKGYNYFICS+PGHCKAG+KIA
Sbjct: 61  YPRMAHNVVSLKNKVAYNWCLKPKGSKVYQTGKDRIKLVKGYNYFICSYPGHCKAGMKIA 120

Query: 121 IKAL 125
           IKA+
Sbjct: 121 IKAI 124

[Close]

BLAST of Lsi05G001910 vs. NCBI nr
Match: gi|659112154|ref|XP_008456090.1| (PREDICTED: basic blue protein-like [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 2.6e-56
Identity = 101/124 (81.45%), Postives = 113/124 (91.13%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLVFK 60
           MG+GKGS  AITLLLC+FLIQS++AQA+VYTVGDA GWTFNV  WTKGKIFRAGD+LVFK
Sbjct: 1   MGEGKGSVFAITLLLCIFLIQSEIAQAKVYTVGDANGWTFNVTTWTKGKIFRAGDILVFK 60

Query: 61  YPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVKIA 120
           YP + HNVV  KNKVAYNWCLKP+ S+VYQTGKD IKLVKGYNYFICS+PGHCKAG+KIA
Sbjct: 61  YPRLGHNVVAFKNKVAYNWCLKPKNSKVYQTGKDRIKLVKGYNYFICSYPGHCKAGMKIA 120

Query: 121 IKAL 125
           IKA+
Sbjct: 121 IKAI 124

[Close]

BLAST of Lsi05G001910 vs. NCBI nr
Match: gi|659131262|ref|XP_008465594.1| (PREDICTED: basic blue protein-like [Cucumis melo])

HSP 1 Score: 164.9 bits (416), Expect = 9.3e-38
Identity = 76/126 (60.32%), Postives = 97/126 (76.98%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLI--QSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLV 60
           MG+G+GSA+   +++C+ L+   SQMA A VYTVG A+GWTFNV +W KGK FRAGD LV
Sbjct: 1   MGEGRGSAMVCVVMVCVLLMLQYSQMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVK 120
           F Y P  HNVV + N++ Y+ C  PRGS+V+QTGKD IKLVKG N+FICS PGHC+ G+K
Sbjct: 61  FNYSPSAHNVVGV-NRLGYSRCTTPRGSKVFQTGKDQIKLVKGQNFFICSLPGHCQGGMK 120

Query: 121 IAIKAL 125
           IA+ A+
Sbjct: 121 IAVNAI 125

[Close]

BLAST of Lsi05G001910 vs. NCBI nr
Match: gi|449464494|ref|XP_004149964.1| (PREDICTED: basic blue protein-like [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 2.7e-37
Identity = 74/126 (58.73%), Postives = 97/126 (76.98%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLI--QSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLV 60
           MG+G+GSA+   +++C+ L+   S MA A VYTVG A+GWTFNV +W KGK FRAGD LV
Sbjct: 1   MGEGRGSAMVCVVMVCMLLMLQYSHMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FKYPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVK 120
           F Y P  HNVV + N++ Y+ C+ PRGS+V+QTGKD IKLVKG N+FIC+ PGHC+ G+K
Sbjct: 61  FNYSPSAHNVVGV-NRLGYSRCITPRGSKVFQTGKDQIKLVKGQNFFICNIPGHCQGGMK 120

Query: 121 IAIKAL 125
           IA+ A+
Sbjct: 121 IAVNAI 125

[Close]

BLAST of Lsi05G001910 vs. NCBI nr
Match: gi|672107685|ref|XP_008781025.1| (PREDICTED: basic blue protein-like [Phoenix dactylifera])

HSP 1 Score: 161.8 bits (408), Expect = 7.8e-37
Identity = 74/124 (59.68%), Postives = 94/124 (75.81%), Query Frame = 1


Query: 1   MGQGKGSAIAITLLLCLFLIQSQMAQARVYTVGDAKGWTFNVNAWTKGKIFRAGDVLVFK 60
           M QG+GSA+A+ L L   LI S++A++  YTVGD++GWTFN   W +GK FRAGDVLVFK
Sbjct: 1   MAQGRGSAVALGLALLCLLIHSEIAESATYTVGDSRGWTFNTVNWPRGKRFRAGDVLVFK 60

Query: 61  YPPMLHNVVVLKNKVAYNWCLKPRGSRVYQTGKDTIKLVKGYNYFICSFPGHCKAGVKIA 120
           Y    HNVV + N  AYN CL PRGSRV+++G D I L +G NYFIC+FPGHC+AG+KIA
Sbjct: 61  YSRSAHNVVAV-NAAAYNRCLTPRGSRVFRSGNDRITLARGTNYFICNFPGHCQAGMKIA 120

Query: 121 IKAL 125
           + A+
Sbjct: 121 VTAV 123

The following BLAST results are available for this feature:

BLAST of Lsi05G001910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BABL_LILLO	1.2e-29	50.00	Chemocyanin OS=Lilium longiflorum PE=1 SV=1	[more]
BABL_ARATH	1.6e-29	48.46	Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2	[more]
BABL_CUCSA	2.7e-29	57.29	Basic blue protein OS=Cucumis sativus PE=1 SV=1	[more]
BCB3_ARATH	3.9e-12	37.70	Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1	[more]
MAVI_CUCPE	1.1e-11	35.64	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]

BLAST of Lsi05G001910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9C5_CUCSA	3.9e-59	85.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214580 PE=4 SV=1	[more]
A0A0A0LC13_CUCSA	1.9e-37	58.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G215590 PE=4 SV=1	[more]
M5Y261_PRUPE	5.5e-37	61.11	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021383mg PE=4 SV=1	[more]
V7CQP8_PHAVU	7.9e-36	59.35	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G250700g PE=4 SV=1	[more]
D7T037_VITVI	1.3e-35	61.29	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01140 PE=4 SV=...	[more]

BLAST of Lsi05G001910 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02850.1	8.9e-31	48.46	plantacyanin	[more]
AT3G60270.1	6.6e-18	40.98	Cupredoxin superfamily protein	[more]
AT5G26330.1	1.9e-17	34.96	Cupredoxin superfamily protein	[more]
AT1G17800.1	3.3e-17	39.13	early nodulin-like protein 22	[more]
AT3G60280.1	2.2e-13	37.70	uclacyanin 3	[more]

BLAST of Lsi05G001910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464492\|ref\|XP_004149963.1\|	5.6e-59	85.48	PREDICTED: basic blue protein-like [Cucumis sativus]	[more]
gi\|659112154\|ref\|XP_008456090.1\|	2.6e-56	81.45	PREDICTED: basic blue protein-like [Cucumis melo]	[more]
gi\|659131262\|ref\|XP_008465594.1\|	9.3e-38	60.32	PREDICTED: basic blue protein-like [Cucumis melo]	[more]
gi\|449464494\|ref\|XP_004149964.1\|	2.7e-37	58.73	PREDICTED: basic blue protein-like [Cucumis sativus]	[more]
gi\|672107685\|ref\|XP_008781025.1\|	7.8e-37	59.68	PREDICTED: basic blue protein-like [Phoenix dactylifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001910.1	Lsi05G001910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 58..123 score: 7.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 38..116 score: 4.4
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 28..124 score: 31
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 26..123 score: 1.2
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 29..123 score: 1.41
None	No IPR available	unknown	Coil	Coil	coord: 114..124 scor
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 2..124 score: 1.2
None	No IPR available	PANTHER	PTHR33021:SF61	SUBFAMILY NOT NAMED	coord: 2..124 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001910	Csa3G214580	Cucumber (Chinese Long) v2	culsiB202
Lsi05G001910	CSPI03G18840	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001910	Cucsa.049510	Cucumber (Gy14) v1	cgylsiB029
Lsi05G001910	Cucsa.033180	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001910	CmaCh16G003720	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G001910	CmaCh04G005120	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G001910	CmoCh16G003990	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G001910	CmoCh04G005510	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G001910	Cla013046	Watermelon (97103) v1	lsiwmB361
Lsi05G001910	MELO3C019486	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001910	ClCG05G009770	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001910	MELO3C019486.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001910	Cla97C05G092140	Watermelon (97103) v2	lsiwmbB329
Lsi05G001910	Bhi01G001230	Wax gourd	lsiwgoB431
Lsi05G001910	Cp4.1LG01g02130	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G001910	Cp4.1LG14g04140	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G001910	CsGy3G018690	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001910	Carg11300	Silver-seed gourd	carlsiB595
Lsi05G001910	Carg26431	Silver-seed gourd	carlsiB057
Lsi05G001910	Carg08182	Silver-seed gourd	carlsiB346
Lsi05G001910	CsaV3_3G018920	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001910	Cucumber (Chinese Long) v3	cuclsiB224
Lsi05G001910	Wild cucumber (PI 183967)	cpilsiB202
Lsi05G001910	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001910	Cucumber (Gy14) v2	cgyblsiB189