Carg11300 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg11300
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	basic blue protein-like
Location	Cucurbita_argyrosperma_scaffold_025 : 107899 .. 109520 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGGTGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGGTAATTTTTCGTATTAAGCACTTGAAAAGTTATTCTAAACTAGTTTTAATGTAGTGTTTGGTAGTATTATAGTCGTATGCATTTAATTTGACCCGTCTGAGACGTGTCCTGAGCTGGGACCGTTCTTGTTTTCTAAATGCAATAGAATTTGTAACACATTTTTCCATAATCCCGAGCTTGAATGTGTGGCTCGCGGGGATTTTTAAGCCCACCGTTAGTAGATATTGTCTCTTTTTCCCTTCTCGATTTTTCCTCGAAGTTTTCAAACGAGTCTAGTAGGGAGAGATTTCTACACCCTTATACCTTCCTCACTGTTAGCAGATATTGTCTTCTTTCCCTTTTCGGTCTTCTCTCAAAGTTTTCAAATGCGTCTAGTAAGTAGAGGTTTTCACACTCTCGTTACTTCATTCCCGTCTCCAACCAATCACTGTTAGTTGATATTATCTCCTCTCCTTTCTGGGCTTTCCCTCAAAATTTTCTAACACGTCTAGTAGAGAGAGATTTCCACACCCTTGTAACTTCATTCCCGTCTCCAACCGATCACTGTTAGCTGATATTATCTCCTCTCCTTTCTGGGTTTTTCTTCAAACTTTTCAAATGCGTCTAGTAGGTAGAGGTTTTCACACCCTCGTAACTTCATTCCCGTCTCCAACCGATCACTGTTAGCAGATATTGTCTTCTTTCCCTTCTGGGTCTTCTCTCAAAGTTTTCAAACGCGTTTGGTACGTAGAGGCTTTCACACCCTTGTAACTTCATTCCCGTCTCCGACCGATAACTGTTAGCTAATATTATCTCTTCTCCTTTCTGGGTTTTCCCTCAAAATTTTCAAACACGTCTAGTAGAGAGAGGTTTCCACACCCTTCTAACTTCGTTCCCTTCTCCAACCGACCACCGTTAGCAAATTGTCTTCTTTCCCTTCTAGGTTTTCTCTCAAAGTTTTCAAACACGTCTAGTAAAAAGAGGTTTCCACACTCTTACCAACCGACATGGGATCTTACAATCCACTCCTCTTGGGGGCCTAGCGTCCTCGTTGACACACCGTCCAATATCTAGTTCTGATACCATTTATAAAGGCCCAAACCCACCGATAGCAGATATTATCATCTTCAGACCCTCCTAGACTTTACACCGTACGATGTCCAGTAGTGAGAGGTTTACCCACCTTTACAAGTATTGCTCAGTTTCCCTCTCCAACCAACGTAGAATCTCAATAACTTTTTGTTTAAGAAACGATTCGTCTTGTGCAGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAGTCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAA

mRNA sequence

ATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGGTGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAGTCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAA

Coding sequence (CDS)

ATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGGTGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAGTCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAA

Protein sequence

MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKIAITAA

Homology

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BLAST of Carg11300 vs. NCBI nr
Match: XP_022923107.1 (basic blue protein-like [Cucurbita moschata])

HSP 1 Score: 254.6 bits (649), Expect = 1.7e-64
Identity = 122/124 (98.39%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAV+VCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQ+KLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

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BLAST of Carg11300 vs. NCBI nr
Match: XP_023553060.1 (basic blue protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 250.8 bits (639), Expect = 2.5e-63
Identity = 120/124 (96.77%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAV+VC+LLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVMVCVLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVV VNRVGYSRCTTPRGSKVFKTGKDQ+KLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVAVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

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BLAST of Carg11300 vs. NCBI nr
Match: XP_022985341.1 (basic blue protein-like [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 5.6e-63
Identity = 120/124 (96.77%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF
Sbjct: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVV VNRVGYSRC TPRGSKVFKTGKD++KLVKGQNFFICTLPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVAVNRVGYSRCITPRGSKVFKTGKDRIKLVKGQNFFICTLPGHCQAGMKIA 120

Query: 121 ITAA 125
           ITAA
Sbjct: 121 ITAA 124

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BLAST of Carg11300 vs. NCBI nr
Match: XP_022149259.1 (basic blue protein-like [Momordica charantia])

HSP 1 Score: 227.6 bits (579), Expect = 2.3e-56
Identity = 106/123 (86.18%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           M +GRGSAVVGAV+ C+LLLQYS++ARAAVYTVGGA GWTFN A+WP GKRFRAGDTLVF
Sbjct: 1   MAKGRGSAVVGAVMACLLLLQYSEMARAAVYTVGGAPGWTFNSAAWPNGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSPAAHNVV VN+VGYSRC TPRGSKVF+TGKDQ+KLVKGQNFFIC LPGHCQAGMKIA
Sbjct: 61  NYSPAAHNVVAVNKVGYSRCITPRGSKVFRTGKDQIKLVKGQNFFICNLPGHCQAGMKIA 120

Query: 121 ITA 124
           ITA
Sbjct: 121 ITA 123

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BLAST of Carg11300 vs. NCBI nr
Match: XP_008465594.1 (PREDICTED: basic blue protein-like [Cucumis melo])

HSP 1 Score: 225.7 bits (574), Expect = 8.6e-56
Identity = 106/124 (85.48%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  V+VC+LL LQYSQ+A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCVLLMLQYSQMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRCTTPRGSKVF+TGKDQ+KLVKGQNFFIC+LPGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCTTPRGSKVFQTGKDQIKLVKGQNFFICSLPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

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BLAST of Carg11300 vs. TAIR10
Match: AT2G02850.1 (plantacyanin)

HSP 1 Score: 144.1 bits (362), Expect = 6.0e-35
Identity = 71/129 (55.04%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 1   MGQGRGS------AVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRA 60
           M +GRGS      A+V  + V +LLLQ   V +AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYV-QAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD++ L KGQNFFIC  P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGMKIAITA 124
           + MKIA+TA
Sbjct: 121 SDMKIAVTA 128

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BLAST of Carg11300 vs. TAIR10
Match: AT5G26330.1 (Cupredoxin superfamily protein)

HSP 1 Score: 89.0 bits (219), Expect = 2.3e-18
Identity = 44/118 (37.29%), Postives = 66/118 (55.93%), Query Frame = 0


Query: 7   SAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWT----FNVASWPKGKRFRAGDTLVFNY 66
           +A++ A + C++++   +++ AAVY VG + GWT     +   W   K F  GDT++F Y
Sbjct: 2   AAIIVAALACIVVM--LRLSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEY 61

Query: 67  SPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVK-GQNFFICTLPGHCQAGMKI 120
           +P  HNV+ V    Y  C T +    F TG D + L   G +FF C +PGHC AG K+
Sbjct: 62  NPQFHNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKL 117

[Close]

BLAST of Carg11300 vs. TAIR10
Match: AT3G60270.1 (Cupredoxin superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.6e-16
Identity = 42/97 (43.30%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 28  AAVYTVGGAKGWTFNV--ASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRG 87
           A  + VG   GWT  V   SW   K FR GDTL F Y P +H+V  VN+  Y  C T R 
Sbjct: 23  AVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGP-SHSVAVVNKADYDGCETSRP 82

Query: 88  SKVFKTGKDQVKLVK-GQNFFICTLPGHCQAGMKIAI 122
           ++ F  G  ++ L K G   F+C  PGHC  GMK+A+
Sbjct: 83  TQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAV 118

[Close]

BLAST of Carg11300 vs. TAIR10
Match: AT2G32300.1 (uclacyanin 1)

HSP 1 Score: 78.6 bits (192), Expect = 3.1e-15
Identity = 38/112 (33.93%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 13  VVVCMLLLQYSQVARAAVYTVGGAKGWTF--NVASWPKGKRFRAGDTLVFNYSPAAHNVV 72
           +++ +L      +  A  +T+GG  GWT   ++ +W  G+ F  GD LVF+Y  A H+VV
Sbjct: 8   IIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVV 67

Query: 73  GVNRVGYSRCTTPRGSKVFKTGKDQVKL-VKGQNFFICTLPGHCQAGMKIAI 122
            V +  +  C   +    F  G   V L   G+ +FIC +PGHC  GMK+ +
Sbjct: 68  EVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEV 119

[Close]

BLAST of Carg11300 vs. TAIR10
Match: AT2G26720.1 (Cupredoxin superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 4.0e-15
Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 30  VYTVGGAKGWTF---NVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGS 89
           V+ VG  KGWT    +  +W   + F+ GDTLVF Y+   H+V  V    +  C + +  
Sbjct: 28  VHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMCESSKPL 87

Query: 90  KVFKTGKDQVKLVK-GQNFFICTLPGHCQAGMKIAI 122
           + +KTG D + L K G   FIC +PGHC+ G K+ I
Sbjct: 88  RRYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQI 123

[Close]

BLAST of Carg11300 vs. Swiss-Prot
Match: sp|P00303|BABL_CUCSA (Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-36
Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 29  AVYTVGGAKGWTFNVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKV 88
           AVY VGG+ GWTFN  SWPKGKRFRAGD L+FNY+P  HNVV VN+ G+S C TP G+KV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 89  FKTGKDQVKLVKGQNFFICTLPGHCQAGMKIAITA 124
           + +G+DQ+KL KGQ++FIC  PGHCQ+GMKIA+ A
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNA 95

[Close]

BLAST of Carg11300 vs. Swiss-Prot
Match: sp|P60496|BABL_LILLO (Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-34
Identity = 70/126 (55.56%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 1   MGQGRGSAVVGAV--VVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTL 60
           M QG GSA    V  VV + L+   +VA + VYTVG   GWTF  + WP GK FRAGD L
Sbjct: 1   MAQGSGSAERALVLGVVLVFLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVL 60

Query: 61  VFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMK 120
           VF Y+PA HNVV V   GY  CT   GS+VFK+G D++ L +G N+FIC++PGHCQ G+K
Sbjct: 61  VFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLK 120

Query: 121 IAITAA 125
           IA+TAA
Sbjct: 121 IAVTAA 126

[Close]

BLAST of Carg11300 vs. Swiss-Prot
Match: sp|Q8LG89|BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-33
Identity = 71/129 (55.04%), Postives = 88/129 (68.22%), Query Frame = 0


Query: 1   MGQGRGS------AVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRA 60
           M +GRGS      A+V  + V +LLLQ   V +AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYV-QAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD++ L KGQNFFIC  P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGMKIAITA 124
           + MKIA+TA
Sbjct: 121 SDMKIAVTA 128

[Close]

BLAST of Carg11300 vs. Swiss-Prot
Match: sp|Q41001|BCP_PEA (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-15
Identity = 46/119 (38.66%), Postives = 63/119 (52.94%), Query Frame = 0


Query: 8   AVVGAVVVCMLL--LQYSQVARAAVYTVGGAKGWTF--NVASWPKGKRFRAGDTLVFNYS 67
           A   A+V+C LL  +  +  + A VYTVG   GW    + ++W   K F  GD+LVFNY 
Sbjct: 2   AFSNALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYG 61

Query: 68  PAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVK-GQNFFICTLPGHCQAGMKIAI 122
             AH V  V    Y  CT+        TG   + L K G+++FIC +PGH   GMK++I
Sbjct: 62  AGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120

[Close]

BLAST of Carg11300 vs. Swiss-Prot
Match: sp|P80728|MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-14
Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 0


Query: 28  AAVYTVGGAKGWT----FNVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTP 87
           A V+ VG + GWT    ++ A W    +F  GD+L+FNY+   HNV+ V++  +  C + 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 88  RGSKVFKTGKDQVKLVK-GQNFFICTLPGHCQAGMKIAI 122
             +  + +G D + L + G  +F+C +PGHCQ G K+ I
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99

[Close]

BLAST of Carg11300 vs. TrEMBL
Match: tr|A0A1S3CPL7|A0A1S3CPL7_CUCME (basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103503230 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.7e-56
Identity = 106/124 (85.48%), Postives = 118/124 (95.16%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  V+VC+LL LQYSQ+A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCVLLMLQYSQMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRCTTPRGSKVF+TGKDQ+KLVKGQNFFIC+LPGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCTTPRGSKVFQTGKDQIKLVKGQNFFICSLPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

[Close]

BLAST of Carg11300 vs. TrEMBL
Match: tr|A0A0A0LC13|A0A0A0LC13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G215590 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.2e-55
Identity = 104/124 (83.87%), Postives = 115/124 (92.74%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  V+VCMLL LQYS +A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCMLLMLQYSHMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRC TPRGSKVF+TGKDQ+KLVKGQNFFIC +PGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCITPRGSKVFQTGKDQIKLVKGQNFFICNIPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

[Close]

BLAST of Carg11300 vs. TrEMBL
Match: tr|A0A2P4JRJ2|A0A2P4JRJ2_QUESU (Basic blue protein OS=Quercus suber OX=58331 GN=CFP56_49803 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 6.7e-49
Identity = 92/124 (74.19%), Postives = 110/124 (88.71%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           M QGRGSA+V  V +CML+ + +S++A AA YTVG + GWTFNVA WPKGKRFRAGDTLV
Sbjct: 1   MAQGRGSAMVATVFLCMLMFVLHSEMAHAATYTVGDSGGWTFNVAGWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSPAAHN+V VN+VGY+ CTTPRGSKV+KTGKDQ+KLVKGQNFFIC++ GHCQ+GMK+
Sbjct: 61  FNYSPAAHNLVAVNKVGYNTCTTPRGSKVYKTGKDQIKLVKGQNFFICSIAGHCQSGMKV 120

Query: 121 AITA 124
           A+TA
Sbjct: 121 AVTA 124

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BLAST of Carg11300 vs. TrEMBL
Match: tr|A0A2N9INA4|A0A2N9INA4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54204 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.8e-49
Identity = 92/123 (74.80%), Postives = 107/123 (86.99%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           M QGRGSA++ AV++CM LL +S++A+AA YTVG A GWTFNVA WPKGKRFRAGDTLVF
Sbjct: 1   MAQGRGSAIIAAVLLCMFLL-HSEMAQAATYTVGDAGGWTFNVAGWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKIA 120
           NYSP AHN V VN+ GY+ CT PRG+KVFKTGKDQ+KLVKGQNFFIC+  GHCQ+GMKIA
Sbjct: 61  NYSPTAHNTVAVNKAGYNTCTAPRGAKVFKTGKDQIKLVKGQNFFICSFAGHCQSGMKIA 120

Query: 121 ITA 124
           +TA
Sbjct: 121 VTA 122

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BLAST of Carg11300 vs. TrEMBL
Match: tr|A0A2P4JRJ1|A0A2P4JRJ1_QUESU (Basic blue protein OS=Quercus suber OX=58331 GN=CFP56_49801 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.7e-48
Identity = 91/124 (73.39%), Postives = 109/124 (87.90%), Query Frame = 0


Query: 1   MGQGRGSAVVGAVVVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           M QGRGSA+V  V +CML+ + +S++A AA YTVG + GWTFNVA WPKGK+FRAGDTLV
Sbjct: 1   MAQGRGSAMVATVFLCMLMFVLHSEMAHAATYTVGDSGGWTFNVAGWPKGKQFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQVKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSPAAHN+V VN+VGY+ CTTPRGSKV+KTGKDQ+KLVKGQNFFIC + GHCQ+GMK+
Sbjct: 61  FNYSPAAHNLVVVNKVGYNTCTTPRGSKVYKTGKDQIKLVKGQNFFICGIAGHCQSGMKV 120

Query: 121 AITA 124
           A+TA
Sbjct: 121 AVTA 124

The following BLAST results are available for this feature:

BLAST of Carg11300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923107.1	1.7e-64	98.39	basic blue protein-like [Cucurbita moschata]	[more]
XP_023553060.1	2.5e-63	96.77	basic blue protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022985341.1	5.6e-63	96.77	basic blue protein-like [Cucurbita maxima]	[more]
XP_022149259.1	2.3e-56	86.18	basic blue protein-like [Momordica charantia]	[more]
XP_008465594.1	8.6e-56	85.48	PREDICTED: basic blue protein-like [Cucumis melo]	[more]

BLAST of Carg11300 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02850.1	6.0e-35	55.04	plantacyanin	[more]
AT5G26330.1	2.3e-18	37.29	Cupredoxin superfamily protein	[more]
AT3G60270.1	1.6e-16	43.30	Cupredoxin superfamily protein	[more]
AT2G32300.1	3.1e-15	33.93	uclacyanin 1	[more]
AT2G26720.1	4.0e-15	38.54	Cupredoxin superfamily protein	[more]

BLAST of Carg11300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P00303\|BABL_CUCSA	8.8e-36	67.37	Basic blue protein OS=Cucumis sativus OX=3659 PE=1 SV=1	[more]
sp\|P60496\|BABL_LILLO	2.8e-34	55.56	Chemocyanin OS=Lilium longiflorum OX=4690 PE=1 SV=1	[more]
sp\|Q8LG89\|BABL_ARATH	1.1e-33	55.04	Basic blue protein OS=Arabidopsis thaliana OX=3702 GN=ARPN PE=2 SV=2	[more]
sp\|Q41001\|BCP_PEA	1.3e-15	38.66	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
sp\|P80728\|MAVI_CUCPE	4.2e-14	35.35	Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1	[more]

BLAST of Carg11300 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CPL7\|A0A1S3CPL7_CUCME	5.7e-56	85.48	basic blue protein-like OS=Cucumis melo OX=3656 GN=LOC103503230 PE=4 SV=1	[more]
tr\|A0A0A0LC13\|A0A0A0LC13_CUCSA	8.2e-55	83.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G215590 PE=4 SV=1	[more]
tr\|A0A2P4JRJ2\|A0A2P4JRJ2_QUESU	6.7e-49	74.19	Basic blue protein OS=Quercus suber OX=58331 GN=CFP56_49803 PE=4 SV=1	[more]
tr\|A0A2N9INA4\|A0A2N9INA4_FAGSY	8.8e-49	74.80	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54204 PE=4 SV=1	[more]
tr\|A0A2P4JRJ1\|A0A2P4JRJ1_QUESU	9.7e-48	73.39	Basic blue protein OS=Quercus suber OX=58331 GN=CFP56_49801 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR039391	Phytocyanin
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg11300-RA	Carg11300-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 39..117 e-value: 3.5E-25 score: 87.7
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 59..123 e-value: 2.0E-22 score: 255.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 29..124 score: 36.147
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 29..124 e-value: 5.0E-34 score: 118.2
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 29..123
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 8..124
None	No IPR available	PANTHER	PTHR33021:SF61	BASIC BLUE PROTEIN	coord: 8..124
None	No IPR available	CDD	cd11013	Plantacyanin	coord: 29..123 e-value: 8.22217E-50 score: 155.205

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg11300	Cla013046	Watermelon (97103) v1	carwmB0655
Carg11300	MELO3C019486	Melon (DHL92) v3.5.1	carmeB0651
Carg11300	ClCG05G009770	Watermelon (Charleston Gray)	carwcgB0636
Carg11300	CmaCh16G003720	Cucurbita maxima (Rimu)	carcmaB0924
Carg11300	CmaCh04G005120	Cucurbita maxima (Rimu)	carcmaB0925
Carg11300	CmoCh04G005510	Cucurbita moschata (Rifu)	carcmoB0899
Carg11300	CmoCh16G003990	Cucurbita moschata (Rifu)	carcmoB0898
Carg11300	Lsi05G001910	Bottle gourd (USVL1VR-Ls)	carlsiB595
Carg11300	Cp4.1LG01g02130	Cucurbita pepo (Zucchini)	carcpeB0927
Carg11300	Cp4.1LG14g04140	Cucurbita pepo (Zucchini)	carcpeB0926
Carg11300	MELO3C019486.2	Melon (DHL92) v3.6.1	carmedB0661
Carg11300	Cla97C05G092140	Watermelon (97103) v2	carwmbB0681
Carg11300	Bhi01G001230	Wax gourd	carwgoB0771

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg11300	Carg26431	Silver-seed gourd	carcarB075
Carg11300	Carg08182	Silver-seed gourd	carcarB403

The following block(s) are covering this gene:


Gene	Organism	Block
Carg11300	Cucumber (Gy14) v2	carcgybB0650
Carg11300	Cucumber (Gy14) v1	carcgyB0730
Carg11300	Wild cucumber (PI 183967)	carcpiB0685
Carg11300	Cucumber (Chinese Long) v2	carcuB0675
Carg11300	Cucumber (Chinese Long) v3	carcucB0687