CmoCh16G003990 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh16G003990
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Basic blue
Location	Cmo_Chr16 : 1841701 .. 1843365 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTATCATCCATTTTCCCCACTACAATTCAGCAACACTACGCTTTGAAGTCTTTGGCCCTTTGTTTTTGTTTGTTTTCTTGTTGAGCAATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGATGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGGTAATTTTTCGTATTAAGCACTTGAAAAGTTATTCTAAACTAGTTTTAATGTAGTGTTTGGTAGTATTATAGTCGTATGCATTTAATTTGACCCGTCTGAGACGTGTCCCGAGCTGGGACCGTTCTTGTTTTCTAAATGCAATAGAACTTGTATCACAGTTGTCCATAATCCCGAGCTTGAACTTGTGGCTCGTGGAGATTTTTAACACAACAAAACCATATTGAATGTTAGATATTGTCTCTCTTTCCCTTCTGGATTTTTTCCTCGAAGTTTTCAAACGAGTCTAGTACGGGAGAGTTTTTTATACCATTATAACTTCTCACTGTTAGCATATATTGTTTCTTTCCCTTCTCGGTCTTCTCTCAAAGTTTTCAAACGCGTTTAGTAGGTAGAGGTTTTCACACCCTTGTAACTTTATTCCCGTCTCCAACCGATCACTGTTAGCTGATATTACCTCCTCTCCTTTCTGGGTTTTCCCTCAAAGTTTTTAAACCCGTCTAGTAGGAAGAGGTTTTCACACCCTTATAAATTCGTTCCCCTCTCCAACCAACCATAAATATTGCCTTCTTTCCCTCCTCGGTTTCTCTCAAAGTTTTCAAACACTTCTAGTAAAAAGAGGTTTCCACGCCCTTATAACTTTATTCCCTTCTCCAATGGACGTGGGATCTTACAATCCACCCTTCTTGGGAGCCTAGCGTCCTCGTTAGCACACCATCTGGTATCTAGTTTTGATACCATTTATAAAGGCCCGAGTCCACTCCTAGCAGATATTATCATATTTGAACCCTCTTAGACTTTCCCTTAAGATTTCAAAACACGTCTAATAGTGAGAGGTTTACACACTTGATAAGTATTGCTCAGTTCCCCTCTCCAACCGACGTAGAATCTCGGTAACTTTTTGTTATAAGAAACGATTCGTTTTGTGCAGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAATCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAAAAACACCGCCATCTTGCTTGAGAGTCCACCATTTGGATCAAATATTAATGGATTAAGTTACTTAATTTCAAATGGGTTTTGGAGATTATGCCTTAATCCTGTTGAATTTGGTGTCTAATTTAGACTCTCATACAATAATCCTACTAACAATATGAGTATTTTCTAGCTTAAGTGCTTTAAGAATGTTTTGCTTAAATGTACTGTGGAATAAAATTTAATATCTTAGTGTGGTACTTTTTTATATCTATTATTATATTAAGTATTATCGATAAC

mRNA sequence

ATTATCATCCATTTTCCCCACTACAATTCAGCAACACTACGCTTTGAAGTCTTTGGCCCTTTGTTTTTGTTTGTTTTCTTGTTGAGCAATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGATGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAATCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAAAAACACCGCCATCTTGCTTGAGAGTCCACCATTTGGATCAAATATTAATGGATTAAGTTACTTAATTTCAAATGGGTTTTGGAGATTATGCCTTAATCCTGTTGAATTTGGTGTCTAATTTAGACTCTCATACAATAATCCTACTAACAATATGAGTATTTTCTAGCTTAAGTGCTTTAAGAATGTTTTGCTTAAATGTACTGTGGAATAAAATTTAATATCTTAGTGTGGTACTTTTTTATATCTATTATTATATTAAGTATTATCGATAAC

Coding sequence (CDS)

ATGGGTCAGGGAAGGGGCAGTGCGGTGGTGGGTGCGGTGATGGTTTGTATGCTGCTGCTCCAATATTCTCAGGTGGCTCGTGCAGCAGTTTATACTGTTGGAGGTGCTAAAGGCTGGACCTTTAATGTTGCCTCCTGGCCTAAGGGAAAGCGCTTCCGAGCTGGCGATACACTCGTATTCAACTACAGCCCAGCGGCACACAACGTGGTGGGTGTCAACCGAGTGGGCTACAGCCGGTGCACAACTCCAAGGGGTTCCAAAGTTTTCAAAACAGGAAAGGACCAAATCAAGCTGGTGAAGGGCCAAAACTTCTTCATCTGCACACTCCCAGGCCACTGCCAGGCCGGAATGAAGATAGCCATCACTGCCGCTTAA

Homology

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BLAST of CmoCh16G003990 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.1e-36
Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 1


Query: 29  AVYTVGGAKGWTFNVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKV 88
           AVY VGG+ GWTFN  SWPKGKRFRAGD L+FNY+P  HNVV VN+ G+S C TP G+KV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 89  FKTGKDQIKLVKGQNFFICTLPGHCQAGMKIAITA 124
           + +G+DQIKL KGQ++FIC  PGHCQ+GMKIA+ A
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNA 95

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BLAST of CmoCh16G003990 vs. Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-34
Identity = 72/128 (56.25%), Postives = 88/128 (68.75%), Query Frame = 1


Query: 1   MGQGRGSA----VVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGD 60
           M QG GSA    V+G V+V   L+   +VA + VYTVG   GWTF  + WP GK FRAGD
Sbjct: 1   MAQGSGSAERALVLGVVLV--FLVFNCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGD 60

Query: 61  TLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAG 120
            LVF Y+PA HNVV V   GY  CT   GS+VFK+G D+I L +G N+FIC++PGHCQ G
Sbjct: 61  VLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGG 120

Query: 121 MKIAITAA 125
           +KIA+TAA
Sbjct: 121 LKIAVTAA 126

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BLAST of CmoCh16G003990 vs. Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2)

HSP 1 Score: 144.4 bits (363), Expect = 8.1e-34
Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 1


Query: 1   MGQGRGSA------VVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRA 60
           M +GRGSA      +V  + V +LLLQ   V +AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYV-QAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD+I L KGQNFFIC  P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGMKIAITA 124
           + MKIA+TA
Sbjct: 121 SDMKIAVTA 128

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BLAST of CmoCh16G003990 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.2e-15
Identity = 46/119 (38.66%), Postives = 63/119 (52.94%), Query Frame = 1


Query: 8   AVVGAVMVCMLL--LQYSQVARAAVYTVGGAKGWTF--NVASWPKGKRFRAGDTLVFNYS 67
           A   A+++C LL  +  +  + A VYTVG   GW    + ++W   K F  GD+LVFNY 
Sbjct: 2   AFSNALVLCFLLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYG 61

Query: 68  PAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKIAI 122
             AH V  V    Y  CT+        TG   I L K G+++FIC +PGH   GMK++I
Sbjct: 62  AGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120

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BLAST of CmoCh16G003990 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14
Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 1


Query: 28  AAVYTVGGAKGWT----FNVASWPKGKRFRAGDTLVFNYSPAAHNVVGVNRVGYSRCTTP 87
           A V+ VG + GWT    ++ A W    +F  GD+L+FNY+   HNV+ V++  +  C + 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 88  RGSKVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKIAI 122
             +  + +G D I L + G  +F+C +PGHCQ G K+ I
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99

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BLAST of CmoCh16G003990 vs. TrEMBL
Match: A0A0A0LC13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G215590 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-55
Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 1


Query: 1   MGQGRGSAVVGAVMVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  VMVCMLL LQYS +A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCMLLMLQYSHMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRC TPRGSKVF+TGKDQIKLVKGQNFFIC +PGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCITPRGSKVFQTGKDQIKLVKGQNFFICNIPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

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BLAST of CmoCh16G003990 vs. TrEMBL
Match: W9SBG7_9ROSA (Basic blue protein OS=Morus notabilis GN=L484_024185 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.9e-45
Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 1


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGR SA+V A ++ +L+L  +++ARAA YTVGGA GWTFNVA WPKGKRFRAGDTLVF
Sbjct: 1   MGQGRVSAMVAAALLLLLVLSQTELARAATYTVGGAGGWTFNVAGWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRC-TTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           NY   AHNVV VN+ GY  C T P+G+KV+ +GKDQIKLVKGQNFFIC  PGHC++GMKI
Sbjct: 61  NYGRGAHNVVAVNKAGYQTCRTVPKGAKVYTSGKDQIKLVKGQNFFICNFPGHCESGMKI 120

Query: 121 AITAA 125
           A+TAA
Sbjct: 121 AVTAA 125

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BLAST of CmoCh16G003990 vs. TrEMBL
Match: A0A061DZ56_THECC (Copper binding protein 6 OS=Theobroma cacao GN=TCM_006411 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.2e-45
Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 1


Query: 1   MGQGRGSAVVGA-VMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           M QGRGSA+  A VM+C+LLL + ++A+AA YTVGG+ GW FN A WPKGKRF+AGDTLV
Sbjct: 1   MAQGRGSAIAAATVMLCLLLLHF-ELAQAATYTVGGSNGWAFNSAGWPKGKRFKAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           FNY+P+ HNVV VNR GY  CTTP+G+ VF++GKDQIKL KGQNFFIC   GHCQAGMK+
Sbjct: 61  FNYNPSIHNVVAVNRAGYKSCTTPKGATVFQSGKDQIKLAKGQNFFICNYIGHCQAGMKV 120

Query: 121 AITAA 125
           AITAA
Sbjct: 121 AITAA 124

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BLAST of CmoCh16G003990 vs. TrEMBL
Match: B9GEY2_POPTR (Basic blue copper family protein OS=Populus trichocarpa GN=POPTR_0001s21660g PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.1e-44
Identity = 90/126 (71.43%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 1   MGQGRGSAVVG--AVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTL 60
           M QGRGSA+V   AVM+CMLLL +  +A AA YTVGG  GWTFNV+ WPKGK F+AGD L
Sbjct: 1   MVQGRGSAMVATVAVMLCMLLLHFD-MAHAATYTVGGPGGWTFNVSGWPKGKSFKAGDIL 60

Query: 61  VFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMK 120
           VFNYS AAHNVV VN+ GYS CT+PRG+KV+ +GKDQIKLVKGQNFFIC+  GHCQ+GMK
Sbjct: 61  VFNYSTAAHNVVAVNKAGYSSCTSPRGAKVYTSGKDQIKLVKGQNFFICSFAGHCQSGMK 120

Query: 121 IAITAA 125
           IA+ AA
Sbjct: 121 IAVNAA 125

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BLAST of CmoCh16G003990 vs. TrEMBL
Match: M5Y261_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021383mg PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.8e-43
Identity = 90/126 (71.43%), Postives = 101/126 (80.16%), Query Frame = 1


Query: 1   MGQGRGSAVVGAVMV-CM-LLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTL 60
           MGQGRGSA VG V+V C+ LLL   + A A  YTVG A GWTFNVA WPKGK FRAGD L
Sbjct: 1   MGQGRGSAGVGVVLVMCLSLLLLQCEWAEARSYTVGDAGGWTFNVAGWPKGKSFRAGDVL 60

Query: 61  VFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMK 120
           VFNY+ +AHNVV VN+ GY  C++PR +KVF+TGKDQIKL KGQNFFIC  PGHCQ+GMK
Sbjct: 61  VFNYASSAHNVVAVNKAGYQTCSSPRAAKVFQTGKDQIKLAKGQNFFICNFPGHCQSGMK 120

Query: 121 IAITAA 125
           IAITAA
Sbjct: 121 IAITAA 126

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BLAST of CmoCh16G003990 vs. TAIR10
Match: AT2G02850.1 (AT2G02850.1 plantacyanin)

HSP 1 Score: 144.4 bits (363), Expect = 4.6e-35
Identity = 72/129 (55.81%), Postives = 88/129 (68.22%), Query Frame = 1


Query: 1   MGQGRGSA------VVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRA 60
           M +GRGSA      +V  + V +LLLQ   V +AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQADYV-QAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD+I L KGQNFFIC  P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 AGMKIAITA 124
           + MKIA+TA
Sbjct: 121 SDMKIAVTA 128

[Close]

BLAST of CmoCh16G003990 vs. TAIR10
Match: AT5G26330.1 (AT5G26330.1 Cupredoxin superfamily protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-18
Identity = 45/118 (38.14%), Postives = 66/118 (55.93%), Query Frame = 1


Query: 7   SAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWT----FNVASWPKGKRFRAGDTLVFNY 66
           +A++ A + C++++   +++ AAVY VG + GWT     +   W   K F  GDT++F Y
Sbjct: 2   AAIIVAALACIVVML--RLSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEY 61

Query: 67  SPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKI 120
           +P  HNV+ V    Y  C T +    F TG D I L   G +FF C +PGHC AG K+
Sbjct: 62  NPQFHNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKL 117

[Close]

BLAST of CmoCh16G003990 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-17
Identity = 49/119 (41.18%), Postives = 64/119 (53.78%), Query Frame = 1


Query: 6   GSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNV--ASWPKGKRFRAGDTLVFNYS 65
           GS    A+++ +LL+    V  A  + VG   GWT  V   SW   K FR GDTL F Y 
Sbjct: 2   GSTAATALLLLLLLVAVPAVF-AVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYG 61

Query: 66  PAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKIAI 122
           P+ H+V  VN+  Y  C T R ++ F  G  +I L K G   F+C  PGHC  GMK+A+
Sbjct: 62  PS-HSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAV 118

[Close]

BLAST of CmoCh16G003990 vs. TAIR10
Match: AT1G17800.1 (AT1G17800.1 early nodulin-like protein 22)

HSP 1 Score: 78.6 bits (192), Expect = 3.1e-15
Identity = 45/119 (37.82%), Postives = 61/119 (51.26%), Query Frame = 1


Query: 8   AVVGAVMVCMLLLQYSQVARAAVYTVGGAKGW--TFNVASWPKGKRFRAGDTLVFNYSPA 67
           A+V  V+   L    +   R   Y VGG  GW     + +W +GK F AGD L F Y   
Sbjct: 18  AIVMTVLCLFLANAVTYARRPTTYIVGGDDGWDPVVPMDTWARGKTFYAGDILEFKYDYQ 77

Query: 68  AHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICT-LPGHCQAGMKIAITA 124
             N++ VNR GY  C    G+  + +G D+I+L  G N+FI T  P  C  G+K+AI A
Sbjct: 78  RFNLIVVNRTGYETCEANVGAIEYSSGDDKIQLNYGYNYFIGTYTPEDCTTGLKMAIKA 136

[Close]

BLAST of CmoCh16G003990 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 77.8 bits (190), Expect = 5.2e-15
Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 1


Query: 13  VMVCMLLLQYSQVARAAVYTVGGAKGWTFNVA--SWPKGKRFRAGDTLVFNYSPAAHNVV 72
           +++ +L      +  A  +T+GG  GWT   +  +W  G+ F  GD LVF+Y  A H+VV
Sbjct: 8   IIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVV 67

Query: 73  GVNRVGYSRCTTPRGSKVFKTGKDQIKLVK-GQNFFICTLPGHCQAGMKIAI 122
            V +  +  C   +    F  G   + L   G+ +FIC +PGHC  GMK+ +
Sbjct: 68  EVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEV 119

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: gi|659131262|ref|XP_008465594.1| (PREDICTED: basic blue protein-like [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 1.2e-56
Identity = 108/124 (87.10%), Postives = 118/124 (95.16%), Query Frame = 1


Query: 1   MGQGRGSAVVGAVMVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  VMVC+LL LQYSQ+A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCVLLMLQYSQMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRCTTPRGSKVF+TGKDQIKLVKGQNFFIC+LPGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCTTPRGSKVFQTGKDQIKLVKGQNFFICSLPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: gi|449464494|ref|XP_004149964.1| (PREDICTED: basic blue protein-like [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 1.7e-55
Identity = 106/124 (85.48%), Postives = 115/124 (92.74%), Query Frame = 1


Query: 1   MGQGRGSAVVGAVMVCMLL-LQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           MG+GRGSA+V  VMVCMLL LQYS +A AAVYTVGGA+GWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCMLLMLQYSHMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           FNYSP+AHNVVGVNR+GYSRC TPRGSKVF+TGKDQIKLVKGQNFFIC +PGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCITPRGSKVFQTGKDQIKLVKGQNFFICNIPGHCQGGMKI 120

Query: 121 AITA 124
           A+ A
Sbjct: 121 AVNA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: gi|703127617|ref|XP_010103882.1| (Basic blue protein [Morus notabilis])

HSP 1 Score: 189.9 bits (481), Expect = 2.7e-45
Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 1


Query: 1   MGQGRGSAVVGAVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLVF 60
           MGQGR SA+V A ++ +L+L  +++ARAA YTVGGA GWTFNVA WPKGKRFRAGDTLVF
Sbjct: 1   MGQGRVSAMVAAALLLLLVLSQTELARAATYTVGGAGGWTFNVAGWPKGKRFRAGDTLVF 60

Query: 61  NYSPAAHNVVGVNRVGYSRC-TTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           NY   AHNVV VN+ GY  C T P+G+KV+ +GKDQIKLVKGQNFFIC  PGHC++GMKI
Sbjct: 61  NYGRGAHNVVAVNKAGYQTCRTVPKGAKVYTSGKDQIKLVKGQNFFICNFPGHCESGMKI 120

Query: 121 AITAA 125
           A+TAA
Sbjct: 121 AVTAA 125

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: gi|590683190|ref|XP_007041535.1| (Copper binding protein 6 [Theobroma cacao])

HSP 1 Score: 188.7 bits (478), Expect = 6.0e-45
Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 1


Query: 1   MGQGRGSAVVGA-VMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTLV 60
           M QGRGSA+  A VM+C+LLL + ++A+AA YTVGG+ GW FN A WPKGKRF+AGDTLV
Sbjct: 1   MAQGRGSAIAAATVMLCLLLLHF-ELAQAATYTVGGSNGWAFNSAGWPKGKRFKAGDTLV 60

Query: 61  FNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMKI 120
           FNY+P+ HNVV VNR GY  CTTP+G+ VF++GKDQIKL KGQNFFIC   GHCQAGMK+
Sbjct: 61  FNYNPSIHNVVAVNRAGYKSCTTPKGATVFQSGKDQIKLAKGQNFFICNYIGHCQAGMKV 120

Query: 121 AITAA 125
           AITAA
Sbjct: 121 AITAA 124

[Close]

BLAST of CmoCh16G003990 vs. NCBI nr
Match: gi|224054286|ref|XP_002298184.1| (basic blue copper family protein [Populus trichocarpa])

HSP 1 Score: 186.4 bits (472), Expect = 3.0e-44
Identity = 90/126 (71.43%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 1   MGQGRGSAVVG--AVMVCMLLLQYSQVARAAVYTVGGAKGWTFNVASWPKGKRFRAGDTL 60
           M QGRGSA+V   AVM+CMLLL +  +A AA YTVGG  GWTFNV+ WPKGK F+AGD L
Sbjct: 1   MVQGRGSAMVATVAVMLCMLLLHFD-MAHAATYTVGGPGGWTFNVSGWPKGKSFKAGDIL 60

Query: 61  VFNYSPAAHNVVGVNRVGYSRCTTPRGSKVFKTGKDQIKLVKGQNFFICTLPGHCQAGMK 120
           VFNYS AAHNVV VN+ GYS CT+PRG+KV+ +GKDQIKLVKGQNFFIC+  GHCQ+GMK
Sbjct: 61  VFNYSTAAHNVVAVNKAGYSSCTSPRGAKVYTSGKDQIKLVKGQNFFICSFAGHCQSGMK 120

Query: 121 IAITAA 125
           IA+ AA
Sbjct: 121 IAVNAA 125

The following BLAST results are available for this feature:

BLAST of CmoCh16G003990 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BABL_CUCSA	5.1e-36	68.42	Basic blue protein OS=Cucumis sativus PE=1 SV=1	[more]
BABL_LILLO	2.1e-34	56.25	Chemocyanin OS=Lilium longiflorum PE=1 SV=1	[more]
BABL_ARATH	8.1e-34	55.81	Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2	[more]
BCP_PEA	2.2e-15	38.66	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]
MAVI_CUCPE	2.5e-14	36.36	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]

BLAST of CmoCh16G003990 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC13_CUCSA	1.2e-55	85.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G215590 PE=4 SV=1	[more]
W9SBG7_9ROSA	1.9e-45	70.40	Basic blue protein OS=Morus notabilis GN=L484_024185 PE=4 SV=1	[more]
A0A061DZ56_THECC	4.2e-45	70.40	Copper binding protein 6 OS=Theobroma cacao GN=TCM_006411 PE=4 SV=1	[more]
B9GEY2_POPTR	2.1e-44	71.43	Basic blue copper family protein OS=Populus trichocarpa GN=POPTR_0001s21660g PE=...	[more]
M5Y261_PRUPE	1.8e-43	71.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021383mg PE=4 SV=1	[more]

BLAST of CmoCh16G003990 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02850.1	4.6e-35	55.81	plantacyanin	[more]
AT5G26330.1	1.3e-18	38.14	Cupredoxin superfamily protein	[more]
AT3G60270.1	1.5e-17	41.18	Cupredoxin superfamily protein	[more]
AT1G17800.1	3.1e-15	37.82	early nodulin-like protein 22	[more]
AT2G32300.1	5.2e-15	33.04	uclacyanin 1	[more]

BLAST of CmoCh16G003990 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131262\|ref\|XP_008465594.1\|	1.2e-56	87.10	PREDICTED: basic blue protein-like [Cucumis melo]	[more]
gi\|449464494\|ref\|XP_004149964.1\|	1.7e-55	85.48	PREDICTED: basic blue protein-like [Cucumis sativus]	[more]
gi\|703127617\|ref\|XP_010103882.1\|	2.7e-45	70.40	Basic blue protein [Morus notabilis]	[more]
gi\|590683190\|ref\|XP_007041535.1\|	6.0e-45	70.40	Copper binding protein 6 [Theobroma cacao]	[more]
gi\|224054286\|ref\|XP_002298184.1\|	3.0e-44	71.43	basic blue copper family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh16G003990.1	CmoCh16G003990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 59..123 score: 2.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 39..117 score: 4.0
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 29..124 score: 35
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 27..123 score: 6.9
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 29..123 score: 1.33
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 2..123 score: 1.4
None	No IPR available	PANTHER	PTHR33021:SF61	SUBFAMILY NOT NAMED	coord: 2..123 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh16G003990	CmaCh16G003720	Cucurbita maxima (Rimu)	cmacmoB322
CmoCh16G003990	CmaCh04G005120	Cucurbita maxima (Rimu)	cmacmoB701
CmoCh16G003990	Cla013046	Watermelon (97103) v1	cmowmB311
CmoCh16G003990	Csa3G214580	Cucumber (Chinese Long) v2	cmocuB320
CmoCh16G003990	MELO3C019486	Melon (DHL92) v3.5.1	cmomeB290
CmoCh16G003990	ClCG05G009770	Watermelon (Charleston Gray)	cmowcgB291
CmoCh16G003990	Lsi05G001910	Bottle gourd (USVL1VR-Ls)	cmolsiB304
CmoCh16G003990	Cp4.1LG01g02130	Cucurbita pepo (Zucchini)	cmocpeB311
CmoCh16G003990	Cp4.1LG14g04140	Cucurbita pepo (Zucchini)	cmocpeB307
CmoCh16G003990	MELO3C019486.2	Melon (DHL92) v3.6.1	cmomedB332
CmoCh16G003990	CsaV3_3G018920	Cucumber (Chinese Long) v3	cmocucB0383
CmoCh16G003990	Cla97C05G092140	Watermelon (97103) v2	cmowmbB332
CmoCh16G003990	Bhi01G001230	Wax gourd	cmowgoB0434
CmoCh16G003990	CsGy3G018690	Cucumber (Gy14) v2	cgybcmoB316
CmoCh16G003990	Carg11300	Silver-seed gourd	carcmoB0898
CmoCh16G003990	Carg08182	Silver-seed gourd	carcmoB0509
CmoCh16G003990	Carg26431	Silver-seed gourd	carcmoB0089

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh16G003990	CmoCh04G005510	Cucurbita moschata (Rifu)	cmocmoB286

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh16G003990	Wild cucumber (PI 183967)	cmocpiB315
CmoCh16G003990	Cucumber (Chinese Long) v2	cmocuB307
CmoCh16G003990	Cucumber (Gy14) v2	cgybcmoB301
CmoCh16G003990	Cucumber (Chinese Long) v3	cmocucB0370
CmoCh16G003990	Cucumber (Gy14) v1	cgycmoB0006