Lsi05G001850 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001850
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Transmembrane emp24 domain-containing 10
Location	chr05 : 2642324 .. 2644883 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCCGGGAACTGGTTTTGCCGTTGTTCGTGCTCTGTTTCTTCGCCACAGATCTTGTTCGGACTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAAGAAATCCAAACCAACGTTGTGGTTCTTGCCGATTATGTCGTCGTCGCCGATCATACTCACTCCCCCACCATTTCTGTCAAGGTCAATTTTCCACATTAAACCCTCCTTTTTTTTTCCCCTTTGATTCTTCGCCAATGCCTCTTTCATTAGTGCCCTGGAGTTTTGCATTTTGAATTTCTTGATTTGTTAAATTGATACGCTTAATGAAATAACCCTGATGGGTACGATTGGTTCCTTGCCTTGCTATTTATTTGTTGATTTGTCTCTCCCGTTTGGTTTTGACCGACCAATTTCGAAATACCGAGAACTATGATCTATTTCTTGTGGGTCTTCTCCCTTTTTCTTTTCTTGGAGATAAAATTTAATATTTCCAATTATTGAATTAACGGGCCATAGGATTTTTCCGGCTATGCTGATTTATGGAAATCAAGTGCGCCAGTGGAACTGACCATTTTCCTCTGGCTTGTTGCTCGCGAAAGTAAAACTCTGTAGGCTTTTACCATTGCAGTGAGATGAAAGAAAGAGATCAATTCTGTGAATAGCATCTTTTCTTTACTGTTATGGAGGCCTTTTCATTCAATTTTAGTTTGTTTCGTTTCTGATTTTGGCTGTGAAGATTATTTCAAAACATTTATAGGAATAGTTGTGGATTAATTTCGAGGGGAAGAGAAATATCTTGGCAATCTGATGCTGACCCACATTTTTTGGTTTTTGCAAATTGTTTAAAAATTCTTCATGTATATGATTTATAGCCCAGTGATTGTTTGGGAGGATGATTCATGAGGAGGGTGATGAAAAAGTTGAATCTTGATTCTGGGGTGTGTCTGTTTTGGAAGGATCTTTTCCATGAAGGTCATGATGTTAAATTCAAATTGAAGTGTTCTCTTGGCACACACCATGCACCTGATAGCGATTTAAATTGGATGGCAAGAATTTAGGAGTTTAGCTCTCTTTTCCATATCCTTGTACAATTCCTTGAAAATTACATGTCATTTTATGGTTTAAACTTTAGATTTTGCAAATGAATGTATTTGTGTATTAAGATTAACAAGAGTATCAAAACGTTACTAGTCTTAATGTTATTGACAGTGACATATCTTTATTTACAGTTCAATTTGAGTCTCTAGATGAAATTCTTTTGCCTTTTGTATGGTGGATTCCATTGAGGGGTTAGTTTTTAACCTATGTATCCCCGTTGGACATCTTTAAAAGGTCATTGCTCTTAGAAAATAAGTTTGGTCTGCTATTTCTTGGTTTTAACTAATTTCTCTTCGACCCCTCAATCTAAGACTTGAACAACTGCTGTGGAAGTTTAGACTTAGCAGTGGTTCAGACCACTTGATCTGTATTACTGATAGAGTCAGTTGCACTATATATTTTAGGGTAATTAGCCAGTCCATTGGTTGTGCTGCTTTTAAGCAATTAATATCTGTCATTTGGTCGTGAAACGAATTACCTATTCAATAATGTCCAACATATAAACAATAGTGTGTACGAAAGATGCAATTTGCAATTAGTAAAAAGAAACTATGGCTCTTGATGGCCTGTGTGACTTTACACCAAAAGAAAGCATTGATAATGCCATATTTGAAAGCTTCCTTGGATGATTTGGCTTTGTCTTGGAAAATTCTTGCATTTTGTTCTTCCCAAACCTTCCACAAAATCCATAACTTTTAAAGACTGAATTAATAATCTCGTAGAGTTTTGGTGAAAATCGATGTTTTTGCTTAATGTGTGGAAAGATTTTCTTTTCAAGTTGATGGGTAGCTTCTTCCTATAATGTCTTGATGTGTGTTATTGTTTTGTACTTTACTGATTGATGGTGGGCTCCTTTAGGTGACATCTCCGTACGGGAACAATCTTCATCACTCAGAGAATGTAACACACAGCCAGTTTGCGTTTACGACTAGTGAGGCTGGTAATTACCTAGTATGTTTCTGGTTGACTGACCACAAGCATGAAGCTGGCGTTGAGATAAGTGTCAACCTTGACTGGAGAACTGGGATTGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGTAACTACTTCCTCTTCACCTTTTCATATTTCCCTACAACCTGAAACATCCATTCTATCATTCTAATGCCCCACCTCATTCTCGTTTAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCGGTCGAAGCTATCCATGAAAATCTACTCTATCTCAAGGACAGGTAACTAAGTTTCAATAGTAAAACTGGATGCATACCAAAATCTAGCCATTATTTATATAGATTTTGGATCCTCACAGAGAAGCAGATATGAGGACGGTCAGCGAGAGGACAAACGCACGAGTTGCATGGTATAGCGTCATATCCTTGGGTGTCTGCATTGTTGCTTCTACTATACAGATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAG

mRNA sequence

ATGCGCCGGGAACTGGTTTTGCCGTTGTTCGTGCTCTGTTTCTTCGCCACAGATCTTGTTCGGACTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAAGAAATCCAAACCAACGTTGTGGTTCTTGCCGATTATGTCGTCGTCGCCGATCATACTCACTCCCCCACCATTTCTGTCAAGGTGACATCTCCGTACGGGAACAATCTTCATCACTCAGAGAATGTAACACACAGCCAGTTTGCGTTTACGACTAGTGAGGCTGGTAATTACCTAGTATGTTTCTGGTTGACTGACCACAAGCATGAAGCTGGCGTTGAGATAAGTGTCAACCTTGACTGGAGAACTGGGATTGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCGGTCGAAGCTATCCATGAAAATCTACTCTATCTCAAGGACAGAGAAGCAGATATGAGGACGGTCAGCGAGAGGACAAACGCACGAGTTGCATGGTATAGCGTCATATCCTTGGGTGTCTGCATTGTTGCTTCTACTATACAGATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAG

Coding sequence (CDS)

ATGCGCCGGGAACTGGTTTTGCCGTTGTTCGTGCTCTGTTTCTTCGCCACAGATCTTGTTCGGACTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAAGAAATCCAAACCAACGTTGTGGTTCTTGCCGATTATGTCGTCGTCGCCGATCATACTCACTCCCCCACCATTTCTGTCAAGGTGACATCTCCGTACGGGAACAATCTTCATCACTCAGAGAATGTAACACACAGCCAGTTTGCGTTTACGACTAGTGAGGCTGGTAATTACCTAGTATGTTTCTGGTTGACTGACCACAAGCATGAAGCTGGCGTTGAGATAAGTGTCAACCTTGACTGGAGAACTGGGATTGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCGGTCGAAGCTATCCATGAAAATCTACTCTATCTCAAGGACAGAGAAGCAGATATGAGGACGGTCAGCGAGAGGACAAACGCACGAGTTGCATGGTATAGCGTCATATCCTTGGGTGTCTGCATTGTTGCTTCTACTATACAGATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAG

Protein sequence

MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTHSPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWYSVISLGVCIVASTIQIWYLKRFFQKKKLI

Homology

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BLAST of Lsi05G001850 vs. Swiss-Prot
Match: P24D3_ARATH (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana GN=At1g09580 PE=1 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.8e-79
Identity = 144/213 (67.61%), Postives = 176/213 (82.63%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVA-DHT 60
           MRRE     F+L F    ++    ++WL++PP+GTKCVSEEIQ+NVVVLADY++++ DH 
Sbjct: 7   MRREFPTA-FLLLFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDHE 66

Query: 61  HSPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLD 120
             PTISVKVTSPYGNNLH+ ENVTH QFAFTT E+GNYL CFW  D K      +S+N+D
Sbjct: 67  VMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFW-ADEKSHGNKNVSINID 126

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNAR 180
           WRTGIAAKDW S+AKKEKIEGVELE+RKLEGAVEAIHEN+LYL++READMRT+SE+TN+R
Sbjct: 127 WRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSR 186

Query: 181 VAWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           VAWYS++SLGVCI  S  Q+ YLK++F+KKKLI
Sbjct: 187 VAWYSIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of Lsi05G001850 vs. Swiss-Prot
Match: P24D4_ARATH (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana GN=CYB PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.2e-69
Identity = 127/213 (59.62%), Postives = 170/213 (79.81%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD-HT 60
           M+++++    +L      L     ++WL +P +G+KCVSEEIQ+NV+VLADY+V+++ H+
Sbjct: 1   MKKKMIPTTILLSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 60

Query: 61  HSPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLD 120
             PT+SVKVT+PYG  LHH EN T+ QFAFTT E+G YL CF   D K     + S+N+D
Sbjct: 61  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACF-EADAKSHGNKDFSINID 120

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNAR 180
           W+TGIAAKDW+S+A+KEKIEGVELE +KLEGAVEAIHENL+YL++REA+MR VSE+TN+R
Sbjct: 121 WKTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSR 180

Query: 181 VAWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           VAWYS++SLG+CIV S +QI YLK++F+KKKLI
Sbjct: 181 VAWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

[Close]

BLAST of Lsi05G001850 vs. Swiss-Prot
Match: P24D5_ARATH (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana GN=At1g21900 PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.7e-69
Identity = 136/207 (65.70%), Postives = 162/207 (78.26%), Query Frame = 1


Query: 9   LFVLCFFATDLVRTAHSIWLNLPPSG-TKCVSEEIQTNVVVLADYVVVADHT--HSPTIS 68
           L V+ FF T  V    +IWL +P +G TKCVSEEIQ+NVVVLADY VV +H   ++P +S
Sbjct: 13  LTVVLFFLT--VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAVS 72

Query: 69  VKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWRTGIA 128
            KVTSPYGNNLHH ENVTH QFAFTT EAGNYL CFW+ D  H     I++ +DW+ GIA
Sbjct: 73  SKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWI-DSSHHLANPITLGVDWKMGIA 132

Query: 129 AKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWYSV 188
           AKDW+SVAKKEKIEGVEL+LR+LEG V +I ENL Y+KDREA+MR VSE TN+RVAW+S+
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 189 ISLGVCIVASTIQIWYLKRFFQKKKLI 213
           +SLGVC+V    QI YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

[Close]

BLAST of Lsi05G001850 vs. Swiss-Prot
Match: P24D6_ARATH (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana GN=At3g10780 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-48
Identity = 103/192 (53.65%), Postives = 131/192 (68.23%), Query Frame = 1


Query: 25  SIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTHS--PTISVKVTSPYGNNLHHSENV 84
           +IWL +P SG +CV EEIQ NVVV+ DY+ + D      PT+ V+VTSPYG  L+   NV
Sbjct: 26  AIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQLGPTLDVRVTSPYGKELYKIANV 85

Query: 85  THSQFAFTTSEAGNYLVCFWLTDHK--HEAGVEISVNLDWRTGIAAKDWESVAKKEKIEG 144
           TH Q AFTTSE+G +L C  +   +  H     + V+LDW+ GI AKDW+SVAKKEKIEG
Sbjct: 86  THGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRAKDWDSVAKKEKIEG 145

Query: 145 VELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWYSVISLGVCIVASTIQIW 204
           VELE+R+      AI  N+LYL+ REA MR ++E+TN RV    ++SLGV IV S  Q+ 
Sbjct: 146 VELEIRRSTEYASAIRANILYLRIREAYMREINEKTNTRVNQLGLMSLGVAIVVSISQVL 205

Query: 205 YLKRFFQKKKLI 213
           YLKR+F KKKLI
Sbjct: 206 YLKRYFLKKKLI 217

[Close]

BLAST of Lsi05G001850 vs. Swiss-Prot
Match: P24D9_ARATH (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.8e-41
Identity = 85/211 (40.28%), Postives = 135/211 (63.98%), Query Frame = 1


Query: 7   LPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTHSPT--- 66
           L L  +  F     + + S+   L    TKC+SE+I++N + +  Y VV  +   P+   
Sbjct: 6   LNLCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQS 65

Query: 67  --ISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWR 126
             IS++VTS YGN  HH+E+V   QFAFT  E+G+Y+ C+   DHK E  V +S++ DWR
Sbjct: 66  HKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPE--VTLSIDFDWR 125

Query: 127 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVA 186
           TG+ +K W SVAKK ++E +E ++++L   V +IHE + YL++RE +M+ ++  TN+++A
Sbjct: 126 TGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMA 185

Query: 187 WYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           W S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 186 WLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

[Close]

BLAST of Lsi05G001850 vs. TrEMBL
Match: A0A0A0L744_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214030 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.2e-110
Identity = 199/212 (93.87%), Postives = 208/212 (98.11%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTH 60
           MR E+VLPLF+LCFFATDL+RTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADH+H
Sbjct: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDW 120
           SPTIS+KVTSPYGNNLHHSENVTH QFAFTT+EAGNYLVCFWL+DHKHEAG EISVNLDW
Sbjct: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180
           RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV
Sbjct: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180

Query: 181 AWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           AWYSV+SLGVCI AST+QIWYLKRFFQKKKLI
Sbjct: 181 AWYSVMSLGVCIAASTLQIWYLKRFFQKKKLI 212

[Close]

BLAST of Lsi05G001850 vs. TrEMBL
Match: A0A0A0KHR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411260 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.7e-84
Identity = 156/211 (73.93%), Postives = 185/211 (87.68%), Query Frame = 1


Query: 5   LVLPLF--VLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD-HTHS 64
           ++LP F  +L F  TDLVR  H+IWLNLP SGTKC+SEEIQ+NVVVLADYVV+++ +THS
Sbjct: 6   MILPSFLLILTFLVTDLVRPTHAIWLNLPSSGTKCISEEIQSNVVVLADYVVISENYTHS 65

Query: 65  PTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWR 124
           PTISVKVTSPYGNNLH  EN T  QFAFTT+EAGN+L CFW+  H H+ G E+S+N+DWR
Sbjct: 66  PTISVKVTSPYGNNLHQKENQTSGQFAFTTAEAGNHLACFWVDGH-HQGGGEVSLNVDWR 125

Query: 125 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVA 184
           TGI+AKDWESVAKKEKIEGV+LEL KLEGAV+AIHENL+YLK+READMR VSE+TNARVA
Sbjct: 126 TGISAKDWESVAKKEKIEGVQLELMKLEGAVKAIHENLMYLKNREADMRIVSEKTNARVA 185

Query: 185 WYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           W+S++SLG+CI AS +Q+WYLKRFF KKKLI
Sbjct: 186 WFSIMSLGICIFASALQLWYLKRFFHKKKLI 215

[Close]

BLAST of Lsi05G001850 vs. TrEMBL
Match: A0A061DY43_THECC (Emp24/gp25L/p24 family/GOLD family protein isoform 1 OS=Theobroma cacao GN=TCM_006390 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 7.8e-84
Identity = 160/209 (76.56%), Postives = 180/209 (86.12%), Query Frame = 1


Query: 5   LVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVA-DHTHSPT 64
           +++ L +L F +   V  A  IWLNLP SGTKCVSEEIQ+NVVVLADYVVV+ DH H+PT
Sbjct: 17  VIVVLLLLAFLSNAPVGDA--IWLNLPTSGTKCVSEEIQSNVVVLADYVVVSEDHGHTPT 76

Query: 65  ISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWRTG 124
           ISVKVTSPYGNNLHH ENVTH QFAFTT EAGNYL CFWL  H H  G ++SVN+DW+TG
Sbjct: 77  ISVKVTSPYGNNLHHKENVTHGQFAFTTQEAGNYLACFWLDGHAHGGG-DVSVNIDWKTG 136

Query: 125 IAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWY 184
           IAAKDWESVA+KEKIEGVELELRKLEGAVEAIHENLLYLK REA+MRTVSE TN RVAW+
Sbjct: 137 IAAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREAEMRTVSETTNGRVAWF 196

Query: 185 SVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           S++SLG+CI AS +Q+WYLKRFFQKKKLI
Sbjct: 197 SIMSLGICITASGLQVWYLKRFFQKKKLI 222

[Close]

BLAST of Lsi05G001850 vs. TrEMBL
Match: I3SP02_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 6.6e-83
Identity = 154/213 (72.30%), Postives = 181/213 (84.98%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD-HT 60
           +R  L L     CFF+T+LV +A +IWL LP +GTKCVSEEIQ+NVVVLADYV+V+D H+
Sbjct: 3   IRAMLTLLFLSFCFFSTNLVPSALAIWLTLPATGTKCVSEEIQSNVVVLADYVLVSDDHS 62

Query: 61  HSPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLD 120
           H+PTI VKVTSPYGNNLHH EN TH  FAFTT E GNYL CFW+ D + + G E++VNLD
Sbjct: 63  HNPTIGVKVTSPYGNNLHHKENTTHGSFAFTTQETGNYLACFWM-DGQKQGGGEVNVNLD 122

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNAR 180
           W+ G+AAKDW+SVAKKEKIEGVELELRKLEGAVEAIHENLLYLK REA+MR VSE+TNAR
Sbjct: 123 WKIGVAAKDWDSVAKKEKIEGVELELRKLEGAVEAIHENLLYLKGREAEMRIVSEKTNAR 182

Query: 181 VAWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           VAW+S++SLGVCI  S +Q+WYLKRFFQKKKL+
Sbjct: 183 VAWFSIMSLGVCIGVSALQLWYLKRFFQKKKLL 214

[Close]

BLAST of Lsi05G001850 vs. TrEMBL
Match: F6H957_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01440 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.9e-82
Identity = 157/210 (74.76%), Postives = 181/210 (86.19%), Query Frame = 1


Query: 5   LVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD-HTHS-P 64
           LVL L +L   +  L+  + +IWL++P SGTKCVSEEIQ NVVVLADY+V+ D HTHS P
Sbjct: 8   LVLRLLLLLCISDLLIPMSQAIWLSIPSSGTKCVSEEIQNNVVVLADYLVIPDDHTHSSP 67

Query: 65  TISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWRT 124
           TIS+KVTSPYGNNLHH ENVTH QFAFTTSEAGNYL CFW+  H ++ G ++SVNLDW+T
Sbjct: 68  TISIKVTSPYGNNLHHKENVTHGQFAFTTSEAGNYLACFWVDGH-NQGGGDVSVNLDWKT 127

Query: 125 GIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAW 184
           GI AKDWESVA+KEKIEGVELELRKLEGAVEAIHENLLYLK REA+MR VSE+TNARVAW
Sbjct: 128 GIGAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREAEMRMVSEKTNARVAW 187

Query: 185 YSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           YS++SLGVCI  S +Q+W+LKRFFQKKKLI
Sbjct: 188 YSIMSLGVCIAVSALQLWHLKRFFQKKKLI 216

[Close]

BLAST of Lsi05G001850 vs. TAIR10
Match: AT1G09580.1 (AT1G09580.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 296.2 bits (757), Expect = 1.6e-80
Identity = 144/213 (67.61%), Postives = 176/213 (82.63%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVA-DHT 60
           MRRE     F+L F    ++    ++WL++PP+GTKCVSEEIQ+NVVVLADY++++ DH 
Sbjct: 7   MRREFPTA-FLLLFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDHE 66

Query: 61  HSPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLD 120
             PTISVKVTSPYGNNLH+ ENVTH QFAFTT E+GNYL CFW  D K      +S+N+D
Sbjct: 67  VMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFW-ADEKSHGNKNVSINID 126

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNAR 180
           WRTGIAAKDW S+AKKEKIEGVELE+RKLEGAVEAIHEN+LYL++READMRT+SE+TN+R
Sbjct: 127 WRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSR 186

Query: 181 VAWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           VAWYS++SLGVCI  S  Q+ YLK++F+KKKLI
Sbjct: 187 VAWYSIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of Lsi05G001850 vs. TAIR10
Match: AT1G57620.1 (AT1G57620.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 264.2 bits (674), Expect = 6.8e-71
Identity = 127/213 (59.62%), Postives = 170/213 (79.81%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD-HT 60
           M+++++    +L      L     ++WL +P +G+KCVSEEIQ+NV+VLADY+V+++ H+
Sbjct: 1   MKKKMIPTTILLSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 60

Query: 61  HSPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLD 120
             PT+SVKVT+PYG  LHH EN T+ QFAFTT E+G YL CF   D K     + S+N+D
Sbjct: 61  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACF-EADAKSHGNKDFSINID 120

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNAR 180
           W+TGIAAKDW+S+A+KEKIEGVELE +KLEGAVEAIHENL+YL++REA+MR VSE+TN+R
Sbjct: 121 WKTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSR 180

Query: 181 VAWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           VAWYS++SLG+CIV S +QI YLK++F+KKKLI
Sbjct: 181 VAWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

[Close]

BLAST of Lsi05G001850 vs. TAIR10
Match: AT1G21900.1 (AT1G21900.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 263.1 bits (671), Expect = 1.5e-70
Identity = 136/207 (65.70%), Postives = 162/207 (78.26%), Query Frame = 1


Query: 9   LFVLCFFATDLVRTAHSIWLNLPPSG-TKCVSEEIQTNVVVLADYVVVADHT--HSPTIS 68
           L V+ FF T  V    +IWL +P +G TKCVSEEIQ+NVVVLADY VV +H   ++P +S
Sbjct: 13  LTVVLFFLT--VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAVS 72

Query: 69  VKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWRTGIA 128
            KVTSPYGNNLHH ENVTH QFAFTT EAGNYL CFW+ D  H     I++ +DW+ GIA
Sbjct: 73  SKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWI-DSSHHLANPITLGVDWKMGIA 132

Query: 129 AKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWYSV 188
           AKDW+SVAKKEKIEGVEL+LR+LEG V +I ENL Y+KDREA+MR VSE TN+RVAW+S+
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 189 ISLGVCIVASTIQIWYLKRFFQKKKLI 213
           +SLGVC+V    QI YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

[Close]

BLAST of Lsi05G001850 vs. TAIR10
Match: AT3G10780.1 (AT3G10780.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 194.1 bits (492), Expect = 8.6e-50
Identity = 103/192 (53.65%), Postives = 131/192 (68.23%), Query Frame = 1


Query: 25  SIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTHS--PTISVKVTSPYGNNLHHSENV 84
           +IWL +P SG +CV EEIQ NVVV+ DY+ + D      PT+ V+VTSPYG  L+   NV
Sbjct: 26  AIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQLGPTLDVRVTSPYGKELYKIANV 85

Query: 85  THSQFAFTTSEAGNYLVCFWLTDHK--HEAGVEISVNLDWRTGIAAKDWESVAKKEKIEG 144
           TH Q AFTTSE+G +L C  +   +  H     + V+LDW+ GI AKDW+SVAKKEKIEG
Sbjct: 86  THGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRAKDWDSVAKKEKIEG 145

Query: 145 VELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWYSVISLGVCIVASTIQIW 204
           VELE+R+      AI  N+LYL+ REA MR ++E+TN RV    ++SLGV IV S  Q+ 
Sbjct: 146 VELEIRRSTEYASAIRANILYLRIREAYMREINEKTNTRVNQLGLMSLGVAIVVSISQVL 205

Query: 205 YLKRFFQKKKLI 213
           YLKR+F KKKLI
Sbjct: 206 YLKRYFLKKKLI 217

[Close]

BLAST of Lsi05G001850 vs. TAIR10
Match: AT1G26690.1 (AT1G26690.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42
Identity = 85/211 (40.28%), Postives = 135/211 (63.98%), Query Frame = 1


Query: 7   LPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTHSPT--- 66
           L L  +  F     + + S+   L    TKC+SE+I++N + +  Y VV  +   P+   
Sbjct: 6   LNLCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQS 65

Query: 67  --ISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWR 126
             IS++VTS YGN  HH+E+V   QFAFT  E+G+Y+ C+   DHK E  V +S++ DWR
Sbjct: 66  HKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPE--VTLSIDFDWR 125

Query: 127 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVA 186
           TG+ +K W SVAKK ++E +E ++++L   V +IHE + YL++RE +M+ ++  TN+++A
Sbjct: 126 TGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMA 185

Query: 187 WYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           W S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 186 WLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

[Close]

BLAST of Lsi05G001850 vs. NCBI nr
Match: gi|449464482|ref|XP_004149958.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 3.1e-110
Identity = 199/212 (93.87%), Postives = 208/212 (98.11%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTH 60
           MR E+VLPLF+LCFFATDL+RTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADH+H
Sbjct: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDW 120
           SPTIS+KVTSPYGNNLHHSENVTH QFAFTT+EAGNYLVCFWL+DHKHEAG EISVNLDW
Sbjct: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180
           RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV
Sbjct: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180

Query: 181 AWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           AWYSV+SLGVCI AST+QIWYLKRFFQKKKLI
Sbjct: 181 AWYSVMSLGVCIAASTLQIWYLKRFFQKKKLI 212

[Close]

BLAST of Lsi05G001850 vs. NCBI nr
Match: gi|659112137|ref|XP_008456081.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-108
Identity = 197/212 (92.92%), Postives = 208/212 (98.11%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTH 60
           MRRE+VLPLF+LCFFATDL+RTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADH+H
Sbjct: 1   MRREVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  SPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDW 120
           SPT S+KVTSPYGNNLHHSENVTH QFAFTT+EAGNYLVCFWL+D+KHEAG EISVNLDW
Sbjct: 61  SPTFSIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDYKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180
           RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV
Sbjct: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180

Query: 181 AWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           AWYS++SLGVCIVAST+QI YLKRFFQKKKLI
Sbjct: 181 AWYSLMSLGVCIVASTLQILYLKRFFQKKKLI 212

[Close]

BLAST of Lsi05G001850 vs. NCBI nr
Match: gi|449444687|ref|XP_004140105.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 3.8e-84
Identity = 156/211 (73.93%), Postives = 185/211 (87.68%), Query Frame = 1


Query: 5   LVLPLF--VLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD-HTHS 64
           ++LP F  +L F  TDLVR  H+IWLNLP SGTKC+SEEIQ+NVVVLADYVV+++ +THS
Sbjct: 6   MILPSFLLILTFLVTDLVRPTHAIWLNLPSSGTKCISEEIQSNVVVLADYVVISENYTHS 65

Query: 65  PTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWR 124
           PTISVKVTSPYGNNLH  EN T  QFAFTT+EAGN+L CFW+  H H+ G E+S+N+DWR
Sbjct: 66  PTISVKVTSPYGNNLHQKENQTSGQFAFTTAEAGNHLACFWVDGH-HQGGGEVSLNVDWR 125

Query: 125 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVA 184
           TGI+AKDWESVAKKEKIEGV+LEL KLEGAV+AIHENL+YLK+READMR VSE+TNARVA
Sbjct: 126 TGISAKDWESVAKKEKIEGVQLELMKLEGAVKAIHENLMYLKNREADMRIVSEKTNARVA 185

Query: 185 WYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           W+S++SLG+CI AS +Q+WYLKRFF KKKLI
Sbjct: 186 WFSIMSLGICIFASALQLWYLKRFFHKKKLI 215

[Close]

BLAST of Lsi05G001850 vs. NCBI nr
Match: gi|590683032|ref|XP_007041501.1| (Emp24/gp25L/p24 family/GOLD family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 318.2 bits (814), Expect = 1.1e-83
Identity = 160/209 (76.56%), Postives = 180/209 (86.12%), Query Frame = 1


Query: 5   LVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVA-DHTHSPT 64
           +++ L +L F +   V  A  IWLNLP SGTKCVSEEIQ+NVVVLADYVVV+ DH H+PT
Sbjct: 17  VIVVLLLLAFLSNAPVGDA--IWLNLPTSGTKCVSEEIQSNVVVLADYVVVSEDHGHTPT 76

Query: 65  ISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLDWRTG 124
           ISVKVTSPYGNNLHH ENVTH QFAFTT EAGNYL CFWL  H H  G ++SVN+DW+TG
Sbjct: 77  ISVKVTSPYGNNLHHKENVTHGQFAFTTQEAGNYLACFWLDGHAHGGG-DVSVNIDWKTG 136

Query: 125 IAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARVAWY 184
           IAAKDWESVA+KEKIEGVELELRKLEGAVEAIHENLLYLK REA+MRTVSE TN RVAW+
Sbjct: 137 IAAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREAEMRTVSETTNGRVAWF 196

Query: 185 SVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           S++SLG+CI AS +Q+WYLKRFFQKKKLI
Sbjct: 197 SIMSLGICITASGLQVWYLKRFFQKKKLI 222

[Close]

BLAST of Lsi05G001850 vs. NCBI nr
Match: gi|388507856|gb|AFK41994.1| (unknown [Lotus japonicus])

HSP 1 Score: 315.1 bits (806), Expect = 9.5e-83
Identity = 154/213 (72.30%), Postives = 181/213 (84.98%), Query Frame = 1


Query: 1   MRRELVLPLFVLCFFATDLVRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVAD-HT 60
           +R  L L     CFF+T+LV +A +IWL LP +GTKCVSEEIQ+NVVVLADYV+V+D H+
Sbjct: 3   IRAMLTLLFLSFCFFSTNLVPSALAIWLTLPATGTKCVSEEIQSNVVVLADYVLVSDDHS 62

Query: 61  HSPTISVKVTSPYGNNLHHSENVTHSQFAFTTSEAGNYLVCFWLTDHKHEAGVEISVNLD 120
           H+PTI VKVTSPYGNNLHH EN TH  FAFTT E GNYL CFW+ D + + G E++VNLD
Sbjct: 63  HNPTIGVKVTSPYGNNLHHKENTTHGSFAFTTQETGNYLACFWM-DGQKQGGGEVNVNLD 122

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNAR 180
           W+ G+AAKDW+SVAKKEKIEGVELELRKLEGAVEAIHENLLYLK REA+MR VSE+TNAR
Sbjct: 123 WKIGVAAKDWDSVAKKEKIEGVELELRKLEGAVEAIHENLLYLKGREAEMRIVSEKTNAR 182

Query: 181 VAWYSVISLGVCIVASTIQIWYLKRFFQKKKLI 213
           VAW+S++SLGVCI  S +Q+WYLKRFFQKKKL+
Sbjct: 183 VAWFSIMSLGVCIGVSALQLWYLKRFFQKKKLL 214

The following BLAST results are available for this feature:

BLAST of Lsi05G001850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P24D3_ARATH	2.8e-79	67.61	Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana ...	[more]
P24D4_ARATH	1.2e-69	59.62	Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana ...	[more]
P24D5_ARATH	2.7e-69	65.70	Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana ...	[more]
P24D6_ARATH	1.5e-48	53.65	Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana ...	[more]
P24D9_ARATH	1.8e-41	40.28	Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ...	[more]

BLAST of Lsi05G001850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L744_CUCSA	2.2e-110	93.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214030 PE=3 SV=1	[more]
A0A0A0KHR4_CUCSA	2.7e-84	73.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411260 PE=3 SV=1	[more]
A0A061DY43_THECC	7.8e-84	76.56	Emp24/gp25L/p24 family/GOLD family protein isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]
I3SP02_LOTJA	6.6e-83	72.30	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
F6H957_VITVI	1.9e-82	74.76	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01440 PE=3 SV=...	[more]

BLAST of Lsi05G001850 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09580.1	1.6e-80	67.61	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G57620.1	6.8e-71	59.62	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G21900.1	1.5e-70	65.70	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G10780.1	8.6e-50	53.65	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G26690.1	1.0e-42	40.28	emp24/gp25L/p24 family/GOLD family protein	[more]

BLAST of Lsi05G001850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464482\|ref\|XP_004149958.1\|	3.1e-110	93.87	PREDICTED: transmembrane emp24 domain-containing protein p24delta3 [Cucumis sati...	[more]
gi\|659112137\|ref\|XP_008456081.1\|	1.3e-108	92.92	PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis...	[more]
gi\|449444687\|ref\|XP_004140105.1\|	3.8e-84	73.93	PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis...	[more]
gi\|590683032\|ref\|XP_007041501.1\|	1.1e-83	76.56	Emp24/gp25L/p24 family/GOLD family protein isoform 1 [Theobroma cacao]	[more]
gi\|388507856\|gb\|AFK41994.1\|	9.5e-83	72.30	unknown [Lotus japonicus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR015720	TMP21-related
IPR009038	GOLD_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001850.1	Lsi05G001850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 28..207 score: 5.0
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 25..207 score: 1.0
IPR009038	GOLD domain	PROFILE	PS50866	GOLD	coord: 35..147 score: 14
IPR015720	TMP21-related	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 23..212 score: 1.2E
None	No IPR available	unknown	Coil	Coil	coord: 138..158 scor
None	No IPR available	PANTHER	PTHR22811:SF68	SUBFAMILY NOT NAMED	coord: 23..212 score: 1.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001850	Csa3G214030	Cucumber (Chinese Long) v2	culsiB202
Lsi05G001850	CSPI03G18780	Wild cucumber (PI 183967)	cpilsiB202
Lsi05G001850	Cucsa.049560	Cucumber (Gy14) v1	cgylsiB029
Lsi05G001850	CmaCh16G003750	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G001850	CmaCh04G005180	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G001850	CmoCh04G005560	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G001850	CmoCh16G004040	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G001850	Cla013041	Watermelon (97103) v1	lsiwmB361
Lsi05G001850	MELO3C019479	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001850	ClCG05G009720	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001850	MELO3C019479.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001850	Cla97C05G092080	Watermelon (97103) v2	lsiwmbB329
Lsi05G001850	Bhi01G001223	Wax gourd	lsiwgoB431
Lsi05G001850	Cp4.1LG01g02030	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G001850	Cp4.1LG14g04080	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G001850	CsGy3G018640	Cucumber (Gy14) v2	cgyblsiB189
Lsi05G001850	Carg26426	Silver-seed gourd	carlsiB057
Lsi05G001850	CsaV3_3G018860	Cucumber (Chinese Long) v3	cuclsiB224

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001850	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001850	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001850	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001850	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001850	Silver-seed gourd	carlsiB595
Lsi05G001850	Cucumber (Chinese Long) v3	cuclsiB230