Cp4.1LG01g02030 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g02030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Transmembrane emp24 domain-containing protein 10
Location	Cp4.1LG01 : 2684386 .. 2689712 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATATCGAATGAAACATTATTTATAAAGATATGGAAATCTCTTCCTGTTTTAAAAACCTTAAAGGGAAGTGCTAAAGGGAAAACCCAAAGAAGACAATATTTACGGGCAGTGATCTTGGGTTGTTACAAATGGTATCAGAGCTAAGAGTTAGACATCGGCGATGTGTCAACGAGGAGGCTGAGGTGGGCCAGCAAGGACGCTGGACCTAGAAGTAGAGTGCTACATCGATTGGAGCAGAGAACGAACGAGTCTCCGCCACCGGCTAGGACGTTGGCCTGAGGGTGGACAATATCAATTTCTAATATTCCAAAATTGTGGACAATATGCAAGATTTCGATCACATTCCGAAAAATGGACACCATGAAACTTCCATATAGGTTTTTGCCTGATCTTGAACTTCGAAGAATCAAGCCTCTGGATTTATCAGAAGAATGTTGTTGAACTAGATTGATTAACTAAAACAAAGGGATCATCACCAATATTAATTCTTCGCCCAAGCTACTGGACTTGTTATATCAATGGAAACAGGAGAAGCAGAAGAATGTTCAAGCGAAAGAAAACAGAGGAGCCATCACAAACATGATTCAGTGGACTCAGATCATTTTCGGTTCCAGAAATAGTTTGTTTTGTGTTCGTAAGCAGAGTACAAATCAAAGGCTTCTGTGAAAGTGTGATCGCAGTGCAATTTGTATCTAGAATCATGAACAATCGAGTATGAAATTGTAGTTATTTATGCATTGATTTCACAGTTTCACAGATTGTTTCATCTCTTTCTGAAACCTAAATAGATTTCGATTCTTCAAGAAATGAAAAGCAAGTAACAATCATATGAGAGATTTAAGGCGGATTCAAGAAGGATGAACCTTATTGGACGAAATGGCCTTCCAGGCAGATCTCATGGAAGCAGTGGCCGAGTTCATCGCTGCCTCCATGTACCTCTTGGAAGCAACCGCGGCGGCTTTCTCCATCAATCTGCCCATCTTGCGAGCCTTCTCCGACTTGTCGACGAGGTCTTGAAGCTCAGCCTCGGCCATCCGATCGAACTCCTCCTCGAACCTTCTGAACTCATCCATAGCATCTTCCATGACGGAATCGAGATAATCCTCAGCCTGCTGCATCGCGATCTCAGCGTCTCGAACCTCGTTCTGGTGTTGGAGCTCCATGGCTGCCCAGGAATTGTAGGCTTCGATCTCGAAGAGCTTCATGAGGTCTTCAATGGTGGAAGGGTCGAAATTCTTGTCTTGTAAAGCTCGATCGGAGAGGAAGGTGAACTGGGAGATGAGAGCTTCCATGGTGGATGAGAATCGAGAACCAGAAGCAAAAAAAGGAGGAATGAAGATCAAATTGGAACAGTGGGAGCTGCTGAGTAATGGATTTAAAGAATCTTCGGCTCTACATTTGGATAATATGATCCAATTCGTAGCTAGGGCCGAACAATGATTTACACGAGCTCTTACTTCGATTGAACCCACACGTCGATCCCACGATTCAACGGATAAGGGCCCAAAAAATTTAAGAGTTCTAATCGATCCAAGAACATAATTCAAGATTAAGATCATAAAATTCTAATTTATAATGTTTTGGTAAATAATATTAATAATTTAGAAAGATTCCTCAGTAAAAATATAAATAAAAAATATTTTAGAACTAAATTAACCAAACAAAATATTAATAATGCTCTAATTTTGTGTAGAGAATTTCAGATTACCACAGTCACGGGGTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCATTTTTAATATCTGATCTGAACTGCAAACCAGTTTCGATTCGATTCGGTTCTCTTAGATTTCGGGGTTGGTAATCGGAGAACATCATGCGCCGGGAAGTGGTGTTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGCCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTTAAATTTCGAGATTAAACCTTTTTTCTTCTTTGATTAACAATTCTTCGTTCGCCAATGTCTCTTTTATCTGTGCCTTGGTGGTATTGTTTTTTATTTGAATTTCTCGGTTTGTTAATTTGTTGGGCTGTATCAAAATCAATAGGCTTATGAAATACACCCGACGGGGTAATGCATTGCTACGTATTTGTTGATTTGTCCTCTCCCGTTTGGTTATGACCGATCAATTTCGAAATTCCTAGAACTTCGATCTATTTCTTGTGCGTCTTGTCCTTTGTTTCTAATCTTGGAGATAAAATTTCATGTTGTCATTGATGAATCAACGGGACCAAAGGATTTTCCCGGCTGTGTTGGTTTGCATAAATCCAGTGCGCCAATGGAAGTGTCCTTGCTTCTCTGGCTTGTTGGTCAAGGTCTGATGTTCTCACAACGCTTTAGGCATATCTTAGCAGGGAGATGAAAGAAAGGCATCAATTCTATGATAGCCTCTTCTTCACTATTATGGAGTTTTTTCATCCAATTTTAGTTTGTTTGGTTTCTGAGTTTGTCTGTGAAGATTATCTCAACAGGTTTAGAGGAACATAGGTTGTGGATTCGTTTTAAGGAGATGGTACCTTTGAAATCTGCTGCACACTCACAAATGATTTGGTTTTTGCAAATTGTTTTAAATTCTTAATGATTGTTTGGGAGGATGATTCATGGGGAAGGTGATCAAAAAGTTGAATCTGGAATTGTTTTAGTATCAAAACTTGACTAGTCTATATATTATTGACAGTGATAGATCTTCATTTAAAATTCAATTTGAGTCTCTAGATGATATATTTTGTCCATTTCTTTAGTAGATCTCATTGAAGGGTTGTATTTTGACCTCTGAATTTGTGATGTCCCACATTGGTTGGTTGGAGAGAGGAGAATGAAACACCATTTATAAGGGAGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGTCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAAAAGACAATATCTGCTAGCAGTGGATCTGGGATGTTACAAATGGTATCAGAGCCTGACTGTGTCAGCTTTCTCGCTGTTCCTCGAAGGGGGATAGACACGAGGTGGTGTGCCAGTAAGGGCGCTGGGCCCCAAAGAGGTGGATTTGGGGGGGTCCCACATCGAATTGGAGAAAGGAACGAGTGCCAGCGATGACGCTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGANTTGGGGAAGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAAAAGACAATATCTGCTAGCGGTGGATCTGGGACGTTACAAATGGTATCAGAGCCAGACACCGGACGATGTGTTAGCCTTCTTGCTGTTCCCCGAAGGGGGGTAGACACGAGGCAGTGTGTCAGTAAGGACGCTGGGCCCCAAAGGGGGTGTGGATTTGGTGGGGGTTCCACATCGAATTGGAGAAAGGAACGAGTGCCAGCGAGGACGCTGGGCTCTGAAGGAGGTGGATTGTGATGTCCCACGTTGGTTGGGGAGGAGAACCAAACACCCTTTATAAGGGAGTGGAAACCTTCCTCTAGCAGACGCATTTTAAAGCCTTGAGGGGAAGCCCGAAAGGAAAAGCTCAAAGATGACAATATCTACTAGCGGTGGATCTGGGACGACAGAATTCCTATTGGACATTTTTGAGTGATCATCTCTCTTGAAAAATAATCTTATCTACTCATACTATATATGTTATTTCTTGTATTTTTTTTACTAATTAATCTGAGACTTGAACAGTTCTTATGGAAGTTTAGACTTAGCAGTGCGTCAGGCCATTTGATATGTACTACTGATAAATCCACCGTTCATGGATTGTTGTAAACAACCAGGAGAACTGCACTATATGTTTTAGGATGTTTAGCTGAATCCATTGGTTGTGCCTCCTTATAAGTAATTTATATCTGTCATTTGGTGGTGAAACGGTTCGTCGATTCAATGATGTCAAACATGTTTGAATCTGTGATCTGATTATGATTCCATAACTTATAACGCTAGATCGATAATCACATACAGATTCGGTGCAAATCGATGTTTATTCTATGTGTGTGGAAAAATTTTCCTTTTAAGTTTTGAAGGCCAGATTCCTTCATGTCTTGATTATATGTTATTGTTTTGCACTTTACTGATTGATGACAGTCTCCTTCAGGTGACATCTCCATACGGGAACAATCTTCATCACTCGGAGAACATAACGCATGGTCAGTTTGCGTTTACGACGAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTGGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAGATTGAGGTAACTAACTACTTCCTCCACTTTTCCATATTCCACTACAACTTGTAATATCCATTCGAATCAAACTCGTTCTTGTTTAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGCTCTTTCTCAGGGACAGGTAACTAAGTTTCCATTGTAGAACTGAATGCTTACCTAAATCTAGCCAATGTCCACAACCTTCTCCAACTCATTACTCTGGTTTATATAATTTTGGAGTCTTGCAGAGAAGCTATTATGAGGACGGTCAGCGAGAGAACGAACACACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAGAGAACTTGTTAGTCTACCCTTCTTGTTCTTGCAGAAATAGAATTTGTCCAAGTTATTTAGTTTTCTTTCCTTCATCGTATGAAATAGAAAAGTTTTGACACGTACTGCAAACCATACAGATTCGTTTGTATTTTGTACTTCCGTTCTTGTTGAGTTGCTTTGAAGCTGATAGAATCTAGTTTAAGACTCAGTGTTCATTATCCTTTATATGATTAGGAATCCTAAAAATGCAGCTTCACCTTCTATTAGTCCCAAGCTTTTGACATGGCTGACAATCAGCTTTGAAAAATGCTCGACTTATTCGCCCCTCACCCCAACTCGAGAACTACTCGATTGGTTATGATATATATCTT

mRNA sequence

CATATCGAATGAAACATTATTTATAAAGATATGGAAATCTCTTCCTGTTTTAAAAACCTTAAAGGGAAGTGCTAAAGGGAAAACCCAAAGAAGACAATATTTACGGGCAGTGATCTTGGGTTGTTACAAATGGTATCAGAGCTAAGAGTTAGACATCGGCGATGTGTCAACGAGGAGGCTGAGGTGGGCCAGCAAGGACGCTGGACCTAGAAGTAGAGTGCTACATCGATTGGAGCAGAGAACGAACGAGTCTCCGCCACCGGCTAGGACGTTGGCCTGAGGGTGGACAATATCAATTTCTAATATTCCAAAATTGTGGACAATATGCAAGATTTCGATCACATTCCGAAAAATGGACACCATGAAACTTCCATATAGGTTTTTGCCTGATCTTGAACTTCGAAGAATCAAGCCTCTGGATTTATCAGAAGAATGTTGTTGAACTAGATTGATTAACTAAAACAAAGGGATCATCACCAATATTAATTCTTCGCCCAAGCTACTGGACTTGTTATATCAATGGAAACAGGAGAAGCAGAAGAATGTTCAAGCGAAAGAAAACAGAGGAGCCATCACAAACATGATTCAGTGGACTCAGATCATTTTCGGTTCCAGAAATAGTTTGTTTTGTGTTCGTAAGCAGAGTACAAATCAAAGGCTTCTGTGAAAGTGTGATCGCAGTGCAATTTGTATCTAGAATCATGAACAATCGAGTATGAAATTGTAGTTATTTATGCATTGATTTCACAGTTTCACAGATTGTTTCATCTCTTTCTGAAACCTAAATAGATTTCGATTCTTCAAGAAATGAAAAGCAAGTAACAATCATATGAGAGATTTAAGGCGGATTCAAGAAGGATGAACCTTATTGGACGAAATGGCCTTCCAGGCAGATCTCATGGAAGCAGTGGCCGAGTTCATCGCTGCCTCCATGTACCTCTTGGAAGCAACCGCGGCGGCTTTCTCCATCAATCTGCCCATCTTGCGAGCCTTCTCCGACTTGTCGACGAGGTCTTGAAGCTCAGCCTCGGCCATCCGATCGAACTCCTCCTCGAACCTTCTGAACTCATCCATAGCATCTTCCATGACGGAATCGAGATAATCCTCAGCCTGCTGCATCGCGATCTCAGCGTCTCGAACCTCGTTCTGGTGTTGGAGCTCCATGGCTGCCCAGGAATTGTAGGCTTCGATCTCGAAGAGCTTCATGAGGTCTTCAATGGTGGAAGGGTCGAAATTCTTGTCTTGTAAAGCTCGATCGGAGAGGAAGGTGAACTGGGAGATGAGAGCTTCCATGGTGGATGAGAATCGAGAACCAGAAGCAAAAAAAGGAGGAATGAAGATCAAATTGGAACAGTGGGAGCTGCTGAGTAATGGATTTAAAGAATCTTCGGCTCTACATTTGGATAATATGATCCAATTCGTAGCTAGGGCCGAACAATGATTTACACGAGCTCTTACTTCGATTGAACCCACACGTCGATCCCACGATTCAACGGATAAGGGCCCAAAAAATTTAAGAGTTCTAATCGATCCAAGAACATAATTCAAGATTAAGATCATAAAATTCTAATTTATAATGTTTTGGTAAATAATATTAATAATTTAGAAAGATTCCTCAGTAAAAATATAAATAAAAAATATTTTAGAACTAAATTAACCAAACAAAATATTAATAATGCTCTAATTTTGTGTAGAGAATTTCAGATTACCACAGTCACGGGGTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCATTTTTAATATCTGATCTGAACTGCAAACCAGTTTCGATTCGATTCGGTTCTCTTAGATTTCGGGGTTGGTAATCGGAGAACATCATGCGCCGGGAAGTGGTGTTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGCCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTGACATCTCCATACGGGAACAATCTTCATCACTCGGAGAACATAACGCATGGTCAGTTTGCGTTTACGACGAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTGGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGCTCTTTCTCAGGGACAGAGAAGCTATTATGAGGACGGTCAGCGAGAGAACGAACACACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAGAGAACTTGTTAGTCTACCCTTCTTGTTCTTGCAGAAATAGAATTTGTCCAAGTTATTTAGTTTTCTTTCCTTCATCGTATGAAATAGAAAAGTTTTGACACGTACTGCAAACCATACAGATTCGTTTGTATTTTGTACTTCCGTTCTTGTTGAGTTGCTTTGAAGCTGATAGAATCTAGTTTAAGACTCAGTGTTCATTATCCTTTATATGATTAGGAATCCTAAAAATGCAGCTTCACCTTCTATTAGTCCCAAGCTTTTGACATGGCTGACAATCAGCTTTGAAAAATGCTCGACTTATTCGCCCCTCACCCCAACTCGAGAACTACTCGATTGGTTATGATATATATCTT

Coding sequence (CDS)

ATGCGCCGGGAAGTGGTGTTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGCCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTGACATCTCCATACGGGAACAATCTTCATCACTCGGAGAACATAACGCATGGTCAGTTTGCGTTTACGACGAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTGGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGCTCTTTCTCAGGGACAGAGAAGCTATTATGAGGACGGTCAGCGAGAGAACGAACACACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAG

Protein sequence

MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTHAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI

Homology

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BLAST of Cp4.1LG01g02030 vs. Swiss-Prot
Match: P24D3_ARATH (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana GN=At1g09580 PE=1 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 5.4e-78
Identity = 145/213 (68.08%), Postives = 175/213 (82.16%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVA-DHT 60
           MRRE     F+L F    ++    ++WL++P +GTKCVSEEIQ+NVVVLAD+++++ DH 
Sbjct: 7   MRREFPTA-FLLLFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDHE 66

Query: 61  HAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLD 120
             PTISVKVTSPYGNNLH+ EN+THGQFAFTT E GNYLACFW  D K      VS+N+D
Sbjct: 67  VMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFW-ADEKSHGNKNVSINID 126

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTR 180
           WRTGIAAKDW S+AKKEKIEGVELE+RKLEGAVEAIHEN+L+LR+REA MRT+SE+TN+R
Sbjct: 127 WRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSR 186

Query: 181 VAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           VAWYSIMSLGVCI  S  Q+ YLK++F+KKKLI
Sbjct: 187 VAWYSIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of Cp4.1LG01g02030 vs. Swiss-Prot
Match: P24D4_ARATH (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana GN=CYB PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 9.2e-70
Identity = 130/213 (61.03%), Postives = 170/213 (79.81%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVAD-HT 60
           M+++++    +L      L     ++WL +P +G+KCVSEEIQ+NV+VLAD++V+++ H+
Sbjct: 1   MKKKMIPTTILLSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 60

Query: 61  HAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLD 120
             PT+SVKVT+PYG  LHH EN T+GQFAFTT E G YLACF   D K     + S+N+D
Sbjct: 61  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACF-EADAKSHGNKDFSINID 120

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTR 180
           W+TGIAAKDW+S+A+KEKIEGVELE +KLEGAVEAIHENL++LR+REA MR VSE+TN+R
Sbjct: 121 WKTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSR 180

Query: 181 VAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           VAWYSIMSLG+CI+ S LQI YLK++F+KKKLI
Sbjct: 181 VAWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

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BLAST of Cp4.1LG01g02030 vs. Swiss-Prot
Match: P24D5_ARATH (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana GN=At1g21900 PE=1 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.6e-68
Identity = 132/207 (63.77%), Postives = 160/207 (77.29%), Query Frame = 1


Query: 9   LFVLCFFAADLVRTAHSIWLNLPASG-TKCVSEEIQTNVVVLADFVVVADHT--HAPTIS 68
           L V+ FF    V    +IWL +P +G TKCVSEEIQ+NVVVLAD+ VV +H   + P +S
Sbjct: 13  LTVVLFFLT--VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAVS 72

Query: 69  VKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWRTGIA 128
            KVTSPYGNNLHH EN+THGQFAFTT E GNYLACFW+ D  H     +++ +DW+ GIA
Sbjct: 73  SKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWI-DSSHHLANPITLGVDWKMGIA 132

Query: 129 AKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVAWYSI 188
           AKDW+SVAKKEKIEGVEL+LR+LEG V +I ENL +++DREA MR VSE TN+RVAW+SI
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 189 MSLGVCIIASTLQIWYLKRFFQKKKLI 213
           MSLGVC++    QI YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

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BLAST of Cp4.1LG01g02030 vs. Swiss-Prot
Match: P24D6_ARATH (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana GN=At3g10780 PE=1 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.6e-50
Identity = 105/192 (54.69%), Postives = 134/192 (69.79%), Query Frame = 1


Query: 25  SIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTH--APTISVKVTSPYGNNLHHSENI 84
           +IWL +P SG +CV EEIQ NVVV+ D++ + D      PT+ V+VTSPYG  L+   N+
Sbjct: 26  AIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQLGPTLDVRVTSPYGKELYKIANV 85

Query: 85  THGQFAFTTSEGGNYLACFWLTDHK--HEAGTEVSVNLDWRTGIAAKDWESVAKKEKIEG 144
           THGQ AFTTSE G +LAC  +   +  H   + V V+LDW+ GI AKDW+SVAKKEKIEG
Sbjct: 86  THGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRAKDWDSVAKKEKIEG 145

Query: 145 VELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVAWYSIMSLGVCIIASTLQIW 204
           VELE+R+      AI  N+L+LR REA MR ++E+TNTRV    +MSLGV I+ S  Q+ 
Sbjct: 146 VELEIRRSTEYASAIRANILYLRIREAYMREINEKTNTRVNQLGLMSLGVAIVVSISQVL 205

Query: 205 YLKRFFQKKKLI 213
           YLKR+F KKKLI
Sbjct: 206 YLKRYFLKKKLI 217

[Close]

BLAST of Cp4.1LG01g02030 vs. Swiss-Prot
Match: P24D9_ARATH (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana GN=At1g26690 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 4.0e-41
Identity = 85/211 (40.28%), Postives = 136/211 (64.45%), Query Frame = 1


Query: 7   LPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTHAPT--- 66
           L L  +  F A   + + S+   L +  TKC+SE+I++N + +  + VV  +   P+   
Sbjct: 6   LNLCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQS 65

Query: 67  --ISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWR 126
             IS++VTS YGN  HH+E++  GQFAFT  E G+Y+AC+   DHK E    +S++ DWR
Sbjct: 66  HKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEV--TLSIDFDWR 125

Query: 127 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVA 186
           TG+ +K W SVAKK ++E +E ++++L   V +IHE + +LR+RE  M+ ++  TN+++A
Sbjct: 126 TGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMA 185

Query: 187 WYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           W S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 186 WLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

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BLAST of Cp4.1LG01g02030 vs. TrEMBL
Match: A0A0A0L744_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214030 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.3e-106
Identity = 190/212 (89.62%), Postives = 203/212 (95.75%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTH 60
           MR EVVLPLF+LCFFA DL+RTAHSIWLNLP SGTKCVSEEIQTNVVVLAD+VVVADH+H
Sbjct: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  APTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDW 120
           +PTIS+KVTSPYGNNLHHSEN+THGQFAFTT+E GNYL CFWL+DHKHEAG E+SVNLDW
Sbjct: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRV 180
           RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLL+L+DREA MRTVSERTN RV
Sbjct: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180

Query: 181 AWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           AWYS+MSLGVCI ASTLQIWYLKRFFQKKKLI
Sbjct: 181 AWYSVMSLGVCIAASTLQIWYLKRFFQKKKLI 212

[Close]

BLAST of Cp4.1LG01g02030 vs. TrEMBL
Match: A0A061DY43_THECC (Emp24/gp25L/p24 family/GOLD family protein isoform 1 OS=Theobroma cacao GN=TCM_006390 PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.9e-83
Identity = 162/209 (77.51%), Postives = 179/209 (85.65%), Query Frame = 1


Query: 5   VVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVA-DHTHAPT 64
           V++ L +L F +   V  A  IWLNLP SGTKCVSEEIQ+NVVVLAD+VVV+ DH H PT
Sbjct: 17  VIVVLLLLAFLSNAPVGDA--IWLNLPTSGTKCVSEEIQSNVVVLADYVVVSEDHGHTPT 76

Query: 65  ISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWRTG 124
           ISVKVTSPYGNNLHH EN+THGQFAFTT E GNYLACFWL  H H  G +VSVN+DW+TG
Sbjct: 77  ISVKVTSPYGNNLHHKENVTHGQFAFTTQEAGNYLACFWLDGHAHGGG-DVSVNIDWKTG 136

Query: 125 IAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVAWY 184
           IAAKDWESVA+KEKIEGVELELRKLEGAVEAIHENLL+L+ REA MRTVSE TN RVAW+
Sbjct: 137 IAAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREAEMRTVSETTNGRVAWF 196

Query: 185 SIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           SIMSLG+CI AS LQ+WYLKRFFQKKKLI
Sbjct: 197 SIMSLGICITASGLQVWYLKRFFQKKKLI 222

[Close]

BLAST of Cp4.1LG01g02030 vs. TrEMBL
Match: A0A0A0KHR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411260 PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 3.3e-82
Identity = 154/211 (72.99%), Postives = 184/211 (87.20%), Query Frame = 1


Query: 5   VVLPLF--VLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVAD-HTHA 64
           ++LP F  +L F   DLVR  H+IWLNLP+SGTKC+SEEIQ+NVVVLAD+VV+++ +TH+
Sbjct: 6   MILPSFLLILTFLVTDLVRPTHAIWLNLPSSGTKCISEEIQSNVVVLADYVVISENYTHS 65

Query: 65  PTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWR 124
           PTISVKVTSPYGNNLH  EN T GQFAFTT+E GN+LACFW+  H H+ G EVS+N+DWR
Sbjct: 66  PTISVKVTSPYGNNLHQKENQTSGQFAFTTAEAGNHLACFWVDGH-HQGGGEVSLNVDWR 125

Query: 125 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVA 184
           TGI+AKDWESVAKKEKIEGV+LEL KLEGAV+AIHENL++L++REA MR VSE+TN RVA
Sbjct: 126 TGISAKDWESVAKKEKIEGVQLELMKLEGAVKAIHENLMYLKNREADMRIVSEKTNARVA 185

Query: 185 WYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           W+SIMSLG+CI AS LQ+WYLKRFF KKKLI
Sbjct: 186 WFSIMSLGICIFASALQLWYLKRFFHKKKLI 215

[Close]

BLAST of Cp4.1LG01g02030 vs. TrEMBL
Match: A0A151UBU4_CAJCA (Transmembrane emp24 domain-containing protein 10 OS=Cajanus cajan GN=KK1_021054 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 9.5e-82
Identity = 156/214 (72.90%), Postives = 185/214 (86.45%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFF-AADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVA-DH 60
           M R+ +L +F+L FF +++LV +A +IWL+LP SGTKCVSEEIQ NVVVLAD+VV+  DH
Sbjct: 1   MGRKGMLRMFLLLFFFSSNLVPSALAIWLSLPISGTKCVSEEIQHNVVVLADYVVIPNDH 60

Query: 61  THAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNL 120
           +H PTI+VKVTSPYGNN+HH EN THG FAFTT E GNYLACFW+  H  + G EV+VNL
Sbjct: 61  SHNPTIAVKVTSPYGNNIHHKENTTHGNFAFTTQEAGNYLACFWVDSHNQQGG-EVNVNL 120

Query: 121 DWRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNT 180
           DW+ GIAAKDW+SVA+KEKIEGVELELRKLEGAVEAIHENLL+L+ REA MRTV+E+TN+
Sbjct: 121 DWKIGIAAKDWDSVARKEKIEGVELELRKLEGAVEAIHENLLYLKGREAEMRTVNEKTNS 180

Query: 181 RVAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           RVAW+SIMSLG+CI  S LQ+WYLKRFFQKKKLI
Sbjct: 181 RVAWFSIMSLGICITVSGLQLWYLKRFFQKKKLI 213

[Close]

BLAST of Cp4.1LG01g02030 vs. TrEMBL
Match: V4V0A5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002263mg PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.6e-81
Identity = 153/213 (71.83%), Postives = 186/213 (87.32%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVAD-HT 60
           +R EV+ P+F   +F  + +  + +IWLNLPA+GTKCVSEEIQ NVVVLAD+VVV+D H+
Sbjct: 41  VRGEVLFPVFFAFYFTINAI-VSDAIWLNLPATGTKCVSEEIQNNVVVLADYVVVSDDHS 100

Query: 61  HAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLD 120
           H+PTISVKVTSPYGNNLH+ EN+T+GQFAFTT E GNYLACFW+  H +  G +VSVN+D
Sbjct: 101 HSPTISVKVTSPYGNNLHNRENVTYGQFAFTTHEAGNYLACFWVDGH-NPGGGDVSVNID 160

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTR 180
           W+TGIAAKDWESVA+KEK+EGVELELRKLEGAVEAIHENLL+L+ +EA MR VSE+TN+R
Sbjct: 161 WKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSR 220

Query: 181 VAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           VAWYS+MSLGVCI+ S +Q+W+LKRFFQKKKLI
Sbjct: 221 VAWYSLMSLGVCIVVSGVQVWHLKRFFQKKKLI 251

[Close]

BLAST of Cp4.1LG01g02030 vs. TAIR10
Match: AT1G09580.1 (AT1G09580.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 292.0 bits (746), Expect = 3.0e-79
Identity = 145/213 (68.08%), Postives = 175/213 (82.16%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVA-DHT 60
           MRRE     F+L F    ++    ++WL++P +GTKCVSEEIQ+NVVVLAD+++++ DH 
Sbjct: 7   MRREFPTA-FLLLFLVPVMIPVGEAVWLDVPPTGTKCVSEEIQSNVVVLADYLIISEDHE 66

Query: 61  HAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLD 120
             PTISVKVTSPYGNNLH+ EN+THGQFAFTT E GNYLACFW  D K      VS+N+D
Sbjct: 67  VMPTISVKVTSPYGNNLHNMENVTHGQFAFTTQESGNYLACFW-ADEKSHGNKNVSINID 126

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTR 180
           WRTGIAAKDW S+AKKEKIEGVELE+RKLEGAVEAIHEN+L+LR+REA MRT+SE+TN+R
Sbjct: 127 WRTGIAAKDWASIAKKEKIEGVELEIRKLEGAVEAIHENILYLRNREADMRTMSEKTNSR 186

Query: 181 VAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           VAWYSIMSLGVCI  S  Q+ YLK++F+KKKLI
Sbjct: 187 VAWYSIMSLGVCIAVSGFQVLYLKQYFEKKKLI 217

[Close]

BLAST of Cp4.1LG01g02030 vs. TAIR10
Match: AT1G57620.1 (AT1G57620.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 264.6 bits (675), Expect = 5.2e-71
Identity = 130/213 (61.03%), Postives = 170/213 (79.81%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVAD-HT 60
           M+++++    +L      L     ++WL +P +G+KCVSEEIQ+NV+VLAD++V+++ H+
Sbjct: 1   MKKKMIPTTILLSALIFSLSPICEAVWLTVPHTGSKCVSEEIQSNVIVLADYLVISEEHS 60

Query: 61  HAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLD 120
             PT+SVKVT+PYG  LHH EN T+GQFAFTT E G YLACF   D K     + S+N+D
Sbjct: 61  IFPTVSVKVTAPYGTVLHHRENTTNGQFAFTTQESGTYLACF-EADAKSHGNKDFSINID 120

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTR 180
           W+TGIAAKDW+S+A+KEKIEGVELE +KLEGAVEAIHENL++LR+REA MR VSE+TN+R
Sbjct: 121 WKTGIAAKDWDSIARKEKIEGVELEFKKLEGAVEAIHENLIYLRNREAEMRIVSEKTNSR 180

Query: 181 VAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           VAWYSIMSLG+CI+ S LQI YLK++F+KKKLI
Sbjct: 181 VAWYSIMSLGICIVVSGLQILYLKQYFEKKKLI 212

[Close]

BLAST of Cp4.1LG01g02030 vs. TAIR10
Match: AT1G21900.1 (AT1G21900.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 258.1 bits (658), Expect = 4.8e-69
Identity = 132/207 (63.77%), Postives = 160/207 (77.29%), Query Frame = 1


Query: 9   LFVLCFFAADLVRTAHSIWLNLPASG-TKCVSEEIQTNVVVLADFVVVADHT--HAPTIS 68
           L V+ FF    V    +IWL +P +G TKCVSEEIQ+NVVVLAD+ VV +H   + P +S
Sbjct: 13  LTVVLFFLT--VNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNPENTPAVS 72

Query: 69  VKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWRTGIA 128
            KVTSPYGNNLHH EN+THGQFAFTT E GNYLACFW+ D  H     +++ +DW+ GIA
Sbjct: 73  SKVTSPYGNNLHHQENVTHGQFAFTTQEAGNYLACFWI-DSSHHLANPITLGVDWKMGIA 132

Query: 129 AKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVAWYSI 188
           AKDW+SVAKKEKIEGVEL+LR+LEG V +I ENL +++DREA MR VSE TN+RVAW+SI
Sbjct: 133 AKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRVAWFSI 192

Query: 189 MSLGVCIIASTLQIWYLKRFFQKKKLI 213
           MSLGVC++    QI YLKR+F KKKLI
Sbjct: 193 MSLGVCVVVVGSQILYLKRYFHKKKLI 216

[Close]

BLAST of Cp4.1LG01g02030 vs. TAIR10
Match: AT3G10780.1 (AT3G10780.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 200.7 bits (509), Expect = 9.2e-52
Identity = 105/192 (54.69%), Postives = 134/192 (69.79%), Query Frame = 1


Query: 25  SIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTH--APTISVKVTSPYGNNLHHSENI 84
           +IWL +P SG +CV EEIQ NVVV+ D++ + D      PT+ V+VTSPYG  L+   N+
Sbjct: 26  AIWLTVPESGERCVYEEIQANVVVVLDYICIDDAFTQLGPTLDVRVTSPYGKELYKIANV 85

Query: 85  THGQFAFTTSEGGNYLACFWLTDHK--HEAGTEVSVNLDWRTGIAAKDWESVAKKEKIEG 144
           THGQ AFTTSE G +LAC  +   +  H   + V V+LDW+ GI AKDW+SVAKKEKIEG
Sbjct: 86  THGQAAFTTSESGTFLACLAMHHDQSHHSVNSSVIVSLDWKMGIRAKDWDSVAKKEKIEG 145

Query: 145 VELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVAWYSIMSLGVCIIASTLQIW 204
           VELE+R+      AI  N+L+LR REA MR ++E+TNTRV    +MSLGV I+ S  Q+ 
Sbjct: 146 VELEIRRSTEYASAIRANILYLRIREAYMREINEKTNTRVNQLGLMSLGVAIVVSISQVL 205

Query: 205 YLKRFFQKKKLI 213
           YLKR+F KKKLI
Sbjct: 206 YLKRYFLKKKLI 217

[Close]

BLAST of Cp4.1LG01g02030 vs. TAIR10
Match: AT1G26690.1 (AT1G26690.1 emp24/gp25L/p24 family/GOLD family protein)

HSP 1 Score: 169.5 bits (428), Expect = 2.3e-42
Identity = 85/211 (40.28%), Postives = 136/211 (64.45%), Query Frame = 1


Query: 7   LPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTHAPT--- 66
           L L  +  F A   + + S+   L +  TKC+SE+I++N + +  + VV  +   P+   
Sbjct: 6   LNLCTILLFLAISSQVSQSLHFELQSGRTKCISEDIKSNSMTVGKYTVVNPNEAHPSPQS 65

Query: 67  --ISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWR 126
             IS++VTS YGN  HH+E++  GQFAFT  E G+Y+AC+   DHK E    +S++ DWR
Sbjct: 66  HKISIRVTSSYGNTYHHAEDVESGQFAFTAVESGDYMACYTAVDHKPEV--TLSIDFDWR 125

Query: 127 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVA 186
           TG+ +K W SVAKK ++E +E ++++L   V +IHE + +LR+RE  M+ ++  TN+++A
Sbjct: 126 TGVQSKSWSSVAKKSQVEVMEFDVKRLIETVNSIHEEMFYLREREEEMQNLNRATNSKMA 185

Query: 187 WYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           W S +SL VC+  + +Q  +LK FF+KKK+I
Sbjct: 186 WLSFLSLFVCLGVAGMQFVHLKTFFEKKKVI 214

[Close]

BLAST of Cp4.1LG01g02030 vs. NCBI nr
Match: gi|449464482|ref|XP_004149958.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 4.7e-106
Identity = 190/212 (89.62%), Postives = 203/212 (95.75%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTH 60
           MR EVVLPLF+LCFFA DL+RTAHSIWLNLP SGTKCVSEEIQTNVVVLAD+VVVADH+H
Sbjct: 1   MRWEVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  APTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDW 120
           +PTIS+KVTSPYGNNLHHSEN+THGQFAFTT+E GNYL CFWL+DHKHEAG E+SVNLDW
Sbjct: 61  SPTISIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDHKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRV 180
           RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLL+L+DREA MRTVSERTN RV
Sbjct: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180

Query: 181 AWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           AWYS+MSLGVCI ASTLQIWYLKRFFQKKKLI
Sbjct: 181 AWYSVMSLGVCIAASTLQIWYLKRFFQKKKLI 212

[Close]

BLAST of Cp4.1LG01g02030 vs. NCBI nr
Match: gi|659112137|ref|XP_008456081.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 188/212 (88.68%), Postives = 203/212 (95.75%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTH 60
           MRREVVLPLF+LCFFA DL+RTAHSIWLNLP SGTKCVSEEIQTNVVVLAD+VVVADH+H
Sbjct: 1   MRREVVLPLFLLCFFATDLLRTAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHSH 60

Query: 61  APTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDW 120
           +PT S+KVTSPYGNNLHHSEN+THGQFAFTT+E GNYL CFWL+D+KHEAG E+SVNLDW
Sbjct: 61  SPTFSIKVTSPYGNNLHHSENVTHGQFAFTTTEAGNYLVCFWLSDYKHEAGNEISVNLDW 120

Query: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRV 180
           RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLL+L+DREA MRTVSERTN RV
Sbjct: 121 RTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSERTNARV 180

Query: 181 AWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           AWYS+MSLGVCI+ASTLQI YLKRFFQKKKLI
Sbjct: 181 AWYSLMSLGVCIVASTLQILYLKRFFQKKKLI 212

[Close]

BLAST of Cp4.1LG01g02030 vs. NCBI nr
Match: gi|590683032|ref|XP_007041501.1| (Emp24/gp25L/p24 family/GOLD family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 315.8 bits (808), Expect = 5.6e-83
Identity = 162/209 (77.51%), Postives = 179/209 (85.65%), Query Frame = 1


Query: 5   VVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVA-DHTHAPT 64
           V++ L +L F +   V  A  IWLNLP SGTKCVSEEIQ+NVVVLAD+VVV+ DH H PT
Sbjct: 17  VIVVLLLLAFLSNAPVGDA--IWLNLPTSGTKCVSEEIQSNVVVLADYVVVSEDHGHTPT 76

Query: 65  ISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWRTG 124
           ISVKVTSPYGNNLHH EN+THGQFAFTT E GNYLACFWL  H H  G +VSVN+DW+TG
Sbjct: 77  ISVKVTSPYGNNLHHKENVTHGQFAFTTQEAGNYLACFWLDGHAHGGG-DVSVNIDWKTG 136

Query: 125 IAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVAWY 184
           IAAKDWESVA+KEKIEGVELELRKLEGAVEAIHENLL+L+ REA MRTVSE TN RVAW+
Sbjct: 137 IAAKDWESVARKEKIEGVELELRKLEGAVEAIHENLLYLKSREAEMRTVSETTNGRVAWF 196

Query: 185 SIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           SIMSLG+CI AS LQ+WYLKRFFQKKKLI
Sbjct: 197 SIMSLGICITASGLQVWYLKRFFQKKKLI 222

[Close]

BLAST of Cp4.1LG01g02030 vs. NCBI nr
Match: gi|449444687|ref|XP_004140105.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 4.7e-82
Identity = 154/211 (72.99%), Postives = 184/211 (87.20%), Query Frame = 1


Query: 5   VVLPLF--VLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVAD-HTHA 64
           ++LP F  +L F   DLVR  H+IWLNLP+SGTKC+SEEIQ+NVVVLAD+VV+++ +TH+
Sbjct: 6   MILPSFLLILTFLVTDLVRPTHAIWLNLPSSGTKCISEEIQSNVVVLADYVVISENYTHS 65

Query: 65  PTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLDWR 124
           PTISVKVTSPYGNNLH  EN T GQFAFTT+E GN+LACFW+  H H+ G EVS+N+DWR
Sbjct: 66  PTISVKVTSPYGNNLHQKENQTSGQFAFTTAEAGNHLACFWVDGH-HQGGGEVSLNVDWR 125

Query: 125 TGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTRVA 184
           TGI+AKDWESVAKKEKIEGV+LEL KLEGAV+AIHENL++L++REA MR VSE+TN RVA
Sbjct: 126 TGISAKDWESVAKKEKIEGVQLELMKLEGAVKAIHENLMYLKNREADMRIVSEKTNARVA 185

Query: 185 WYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           W+SIMSLG+CI AS LQ+WYLKRFF KKKLI
Sbjct: 186 WFSIMSLGICIFASALQLWYLKRFFHKKKLI 215

[Close]

BLAST of Cp4.1LG01g02030 vs. NCBI nr
Match: gi|568833844|ref|XP_006471076.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Citrus sinensis])

HSP 1 Score: 311.6 bits (797), Expect = 1.0e-81
Identity = 154/213 (72.30%), Postives = 186/213 (87.32%), Query Frame = 1


Query: 1   MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVAD-HT 60
           +R EV+ P+FV  +F  + +  + +IWLNLPA+GTKCVSEEIQ NVVVLAD+VVV+D H+
Sbjct: 7   VRGEVLFPVFVAFYFTINAI-VSDAIWLNLPATGTKCVSEEIQNNVVVLADYVVVSDDHS 66

Query: 61  HAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEAGTEVSVNLD 120
           H PTISVKVTSPYGNNLH+ EN+T+GQFAFTT E GNYLACFW+  H +  G +VSVN+D
Sbjct: 67  HIPTISVKVTSPYGNNLHNRENVTYGQFAFTTHEAGNYLACFWVDGH-NPGGGDVSVNID 126

Query: 121 WRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLFLRDREAIMRTVSERTNTR 180
           W+TGIAAKDWESVA+KEK+EGVELELRKLEGAVEAIHENLL+L+ +EA MR VSE+TN+R
Sbjct: 127 WKTGIAAKDWESVARKEKLEGVELELRKLEGAVEAIHENLLYLKTKEAEMREVSEKTNSR 186

Query: 181 VAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI 213
           VAWYS+MSLGVCI+ S +Q+W+LKRFFQKKKLI
Sbjct: 187 VAWYSLMSLGVCIVVSGVQVWHLKRFFQKKKLI 217

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g02030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P24D3_ARATH	5.4e-78	68.08	Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana ...	[more]
P24D4_ARATH	9.2e-70	61.03	Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana ...	[more]
P24D5_ARATH	8.6e-68	63.77	Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana ...	[more]
P24D6_ARATH	1.6e-50	54.69	Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana ...	[more]
P24D9_ARATH	4.0e-41	40.28	Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana ...	[more]

BLAST of Cp4.1LG01g02030 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L744_CUCSA	3.3e-106	89.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214030 PE=3 SV=1	[more]
A0A061DY43_THECC	3.9e-83	77.51	Emp24/gp25L/p24 family/GOLD family protein isoform 1 OS=Theobroma cacao GN=TCM_0...	[more]
A0A0A0KHR4_CUCSA	3.3e-82	72.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411260 PE=3 SV=1	[more]
A0A151UBU4_CAJCA	9.5e-82	72.90	Transmembrane emp24 domain-containing protein 10 OS=Cajanus cajan GN=KK1_021054 ...	[more]
V4V0A5_9ROSI	1.6e-81	71.83	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002263mg PE=3 SV=1	[more]

BLAST of Cp4.1LG01g02030 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09580.1	3.0e-79	68.08	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G57620.1	5.2e-71	61.03	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G21900.1	4.8e-69	63.77	emp24/gp25L/p24 family/GOLD family protein	[more]
AT3G10780.1	9.2e-52	54.69	emp24/gp25L/p24 family/GOLD family protein	[more]
AT1G26690.1	2.3e-42	40.28	emp24/gp25L/p24 family/GOLD family protein	[more]

BLAST of Cp4.1LG01g02030 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464482\|ref\|XP_004149958.1\|	4.7e-106	89.62	PREDICTED: transmembrane emp24 domain-containing protein p24delta3 [Cucumis sati...	[more]
gi\|659112137\|ref\|XP_008456081.1\|	1.1e-104	88.68	PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis...	[more]
gi\|590683032\|ref\|XP_007041501.1\|	5.6e-83	77.51	Emp24/gp25L/p24 family/GOLD family protein isoform 1 [Theobroma cacao]	[more]
gi\|449444687\|ref\|XP_004140105.1\|	4.7e-82	72.99	PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis...	[more]
gi\|568833844\|ref\|XP_006471076.1\|	1.0e-81	72.30	PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Citrus ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

Vocabulary: **INTERPRO**
Term	Definition
IPR015720	TMP21-related
IPR009038	GOLD_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g02030.1	Cp4.1LG01g02030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009038	GOLD domain	PFAM	PF01105	EMP24_GP25L	coord: 28..207 score: 3.6
IPR009038	GOLD domain	SMART	SM01190	EMP24_GP25L_2	coord: 25..207 score: 8.2
IPR009038	GOLD domain	PROFILE	PS50866	GOLD	coord: 35..147 score: 13
IPR015720	TMP21-related	PANTHER	PTHR22811	TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN	coord: 16..212 score: 1.4E
None	No IPR available	unknown	Coil	Coil	coord: 138..158 scor
None	No IPR available	PANTHER	PTHR22811:SF68	SUBFAMILY NOT NAMED	coord: 16..212 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g02030	Cucsa.049560	Cucumber (Gy14) v1	cgycpeB0045
Cp4.1LG01g02030	CmaCh04G005180	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g02030	CmoCh16G004040	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g02030	Cla013041	Watermelon (97103) v1	cpewmB433
Cp4.1LG01g02030	Csa3G214030	Cucumber (Chinese Long) v2	cpecuB395
Cp4.1LG01g02030	MELO3C019479	Melon (DHL92) v3.5.1	cpemeB412
Cp4.1LG01g02030	ClCG05G009720	Watermelon (Charleston Gray)	cpewcgB394
Cp4.1LG01g02030	CSPI03G18780	Wild cucumber (PI 183967)	cpecpiB394
Cp4.1LG01g02030	Lsi05G001850	Bottle gourd (USVL1VR-Ls)	cpelsiB369
Cp4.1LG01g02030	MELO3C019479.2	Melon (DHL92) v3.6.1	cpemedB481
Cp4.1LG01g02030	CsaV3_3G018860	Cucumber (Chinese Long) v3	cpecucB0494
Cp4.1LG01g02030	Bhi01G001223	Wax gourd	cpewgoB0517
Cp4.1LG01g02030	CsGy3G018640	Cucumber (Gy14) v2	cgybcpeB372
Cp4.1LG01g02030	Carg26426	Silver-seed gourd	carcpeB0094

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g02030	Cp4.1LG14g04080	Cucurbita pepo (Zucchini)	cpecpeB234

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g02030	Cucumber (Gy14) v1	cgycpeB0007
Cp4.1LG01g02030	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g02030	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g02030	Wild cucumber (PI 183967)	cpecpiB388
Cp4.1LG01g02030	Cucumber (Chinese Long) v2	cpecuB389
Cp4.1LG01g02030	Cucumber (Gy14) v2	cgybcpeB362
Cp4.1LG01g02030	Silver-seed gourd	carcpeB0927
Cp4.1LG01g02030	Cucumber (Chinese Long) v3	cpecucB0484